Query 030564
Match_columns 175
No_of_seqs 114 out of 1299
Neff 7.6
Searched_HMMs 29240
Date Tue Mar 26 01:35:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030564.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030564hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wko_A Terminal flower 1 prote 100.0 1.9E-54 6.5E-59 335.4 18.3 173 1-175 8-180 (180)
2 3axy_A Protein heading DATE 3A 100.0 3.8E-52 1.3E-56 319.8 18.1 166 1-170 5-170 (170)
3 2iqy_A Phosphatidylethanolamin 100.0 4.3E-48 1.5E-52 302.0 17.6 166 4-172 4-180 (190)
4 2jyz_A CG7054-PA, GH14779P, PE 100.0 2.4E-47 8.2E-52 295.3 16.0 158 11-171 2-169 (179)
5 2gzq_A Phosphatidylethanolamin 100.0 3.7E-46 1.3E-50 293.1 14.6 165 2-169 12-200 (200)
6 1wpx_B Carboxypeptidase Y inhi 100.0 4.1E-45 1.4E-49 291.1 15.8 165 3-169 11-220 (220)
7 1fux_A Hypothetical 19.5 kDa p 99.9 1.3E-22 4.4E-27 154.8 9.0 106 36-152 8-146 (166)
8 3n08_A Putative phosphatidylet 99.9 7.1E-21 2.4E-25 143.3 15.3 112 37-155 10-138 (153)
9 1fjj_A Hypothetical 17.1 kDa p 99.8 1.4E-20 4.7E-25 142.7 9.9 81 50-135 30-132 (159)
10 2evv_A Hypothetical protein HP 99.8 3.5E-19 1.2E-23 139.9 9.5 108 50-168 58-199 (207)
11 3ewt_E Tumor necrosis factor r 23.3 31 0.0011 17.3 1.0 10 146-155 16-25 (25)
No 1
>1wko_A Terminal flower 1 protein; CIS-peptide, PEBP, signaling protein; 1.80A {Arabidopsis thaliana} PDB: 1qou_A
Probab=100.00 E-value=1.9e-54 Score=335.40 Aligned_cols=173 Identities=69% Similarity=1.215 Sum_probs=156.7
Q ss_pred CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564 1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSD 80 (175)
Q Consensus 1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~ 80 (175)
|+++.++|++++||||+++.|.|++.|+|.|++ ..|.+|+.|+++++..+|+|+|.+.+.+.+|||+|+|||+|++++
T Consensus 8 ~~~~~~~l~~~~vipdvl~~f~P~~~l~V~y~s--~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DPDaP~~~~ 85 (180)
T 1wko_A 8 GTRVIEPLIMGRVVGDVLDFFTPTTKMNVSYNK--KQVSNGHELFPSSVSSKPRVEIHGGDLRSFFTLVMIDPDVPGPSD 85 (180)
T ss_dssp --CTTHHHHHTTHHHHTBCCCCCCSEEEEEETT--EECCTTCBCCGGGGSSCCEEEEESSCTTCEEEEEEEECSCSBTTB
T ss_pred HHHHHHHHHhCCCCCCccCCcCCCeeEEEEECC--eEcCCCCCcCHHHhCcCCeEEEecCCCCceEEEEEeCCCCCCCcc
Confidence 789999999999999999999999999999988 899999999999999999999999876679999999999999999
Q ss_pred CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceE
Q 030564 81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVA 160 (175)
Q Consensus 81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva 160 (175)
+++++|||||++||+++.+...|..+++|.||+|++|.|||+|+||+|+..+.+...+..|.+||+++|+++++|+.|||
T Consensus 86 p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRYvf~ly~q~~~l~~~~~~~~R~~F~~~~F~~~~~Lg~PVa 165 (180)
T 1wko_A 86 PFLKEHLHWIVTNIPGTTDATFGKEVVSYELPRPSIGIHRFVFVLFRQKQRRVIFPNIPSRDHFNTRKFAVEYDLGLPVA 165 (180)
T ss_dssp CTTCCEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECCTTCCCCCCCCCSTTCCHHHHHHHTTCCSEEE
T ss_pred CCCccEEEEEEeccCcCccccCCceeeeeCCCCCCCCceEEEEEEEecCCccCCCCCccccCCcCHHHHHHHhCCCCcEE
Confidence 99999999999999998666678999999999999999999999999999888764478999999999999999999999
Q ss_pred EEEEEEeeCCCCCCC
Q 030564 161 AVFFNAQRETAARRR 175 (175)
Q Consensus 161 ~~~f~~~~d~~~~~~ 175 (175)
+|||+++||+.+|||
T Consensus 166 ~~fF~~q~d~~~r~~ 180 (180)
T 1wko_A 166 AVFFNAQRETAARKR 180 (180)
T ss_dssp EEEEEECCC------
T ss_pred EEEEEEEECCcccCC
Confidence 999999999999997
No 2
>3axy_A Protein heading DATE 3A; phosphatidylethanolamine-binding protein, 14-3-3 protein, BZ protein, floral induction; HET: SEP; 2.40A {Oryza sativa japonica group} PDB: 1wkp_A
Probab=100.00 E-value=3.8e-52 Score=319.80 Aligned_cols=166 Identities=61% Similarity=1.017 Sum_probs=156.4
Q ss_pred CcccchhhhcCCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564 1 MAKMSDALVLGRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDMRSFFTLIMTDPDVPGPSD 80 (175)
Q Consensus 1 ~~~~~~~l~~~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~ 80 (175)
|+. +++|++++||||||+.|.|++.|+|.|++ ..|.+|+.|+++++..+|+|+|.+.+.+++|||+|+|||+|++++
T Consensus 5 m~~-~~~l~~~~vipdvl~~F~P~~~l~v~y~s--~~v~~G~~l~~~~~~~~P~l~~~~~~~~~~ytlvm~DpDaP~~~~ 81 (170)
T 3axy_A 5 MRD-RDPLVVGRVVGDVLDAFVRSTNLKVTYGS--KTVSNGLELKPSMVTHQPRVEVGGNDMRTFYTLVMVDPDAPSPSD 81 (170)
T ss_dssp CCT-TCHHHHTTHHHHTBCCCCCCSCEEEEETT--EECCTTEECCGGGSSSCCEEEECCSCTTCEEEEEEEETTCSCTTS
T ss_pred cch-hchhhhCCccccccCCcCCceEEEEEECC--eEcCCCCEeCHHHhCcCCeEEEeCCCCCcEEEEEEECCCCCCCcc
Confidence 653 79999999999999999999999999997 899999999999999999999998876899999999999999999
Q ss_pred CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCCCCceE
Q 030564 81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDLGLPVA 160 (175)
Q Consensus 81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva 160 (175)
+++++|||||++||+++.+.+.|+.+++|.||+|++|.|||+|+||+|+..+.+. .+..|.+||+++|+++++|+.|||
T Consensus 82 p~~~~~~HWlv~nIp~~~~~~~G~~~~~Y~gP~Pp~G~HRY~f~ly~q~~~l~~~-~p~~R~~F~~~~F~~~~~Lg~Pva 160 (170)
T 3axy_A 82 PNLREYLHWLVTDIPGTTAASFGQEVMSYESPRPTMGIHRLVFVLFQQLGRQTVY-APGWRQNFNTKDFAELYNLGSPVA 160 (170)
T ss_dssp CTTCSEEEEEEEEEETTSBGGGSEEEECCCCCCCCSSCEEEEEEEEECSSCCCCC-CCSCSTTCCHHHHHHHTTCCSCSE
T ss_pred CCCccEEEEEEeCCCCCccccCCceeceecCCCCCCCcEEEEEEEEecCCccCCC-CccccCCcCHHHHHHHhCCCCcEE
Confidence 9999999999999999866778999999999999999999999999999988776 578999999999999999999999
Q ss_pred EEEEEEeeCC
Q 030564 161 AVFFNAQRET 170 (175)
Q Consensus 161 ~~~f~~~~d~ 170 (175)
+|||+++||.
T Consensus 161 ~~fF~~q~d~ 170 (170)
T 3axy_A 161 AVYFNSQREA 170 (170)
T ss_dssp EEEEEECCCC
T ss_pred EEEEEEEecC
Confidence 9999999985
No 3
>2iqy_A Phosphatidylethanolamine-binding protein 1; alpha-beta, hydrolase inhibitor; 1.40A {Rattus norvegicus} PDB: 2iqx_A 1b7a_A* 1a44_A 1beh_A 1bd9_A 2l7w_A 2qyq_A* 1kn3_A
Probab=100.00 E-value=4.3e-48 Score=302.01 Aligned_cols=166 Identities=28% Similarity=0.538 Sum_probs=153.4
Q ss_pred cchhhhc--CCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCe-EEEecCCCCcEEEEEEEcCCCCCCCC
Q 030564 4 MSDALVL--GRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDMRSFFTLIMTDPDVPGPSD 80 (175)
Q Consensus 4 ~~~~l~~--~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~-i~~~~~~~~~~ytlvmvDpD~p~~~~ 80 (175)
+.++|++ ++||||||+. .|+..|.|.|+++ ..|.+|+.|+++++...|+ |+|.+.+.+++|||+|+|||+|++++
T Consensus 4 ~~~~~~~~~~~vipdvl~~-~p~~~l~v~~~~~-~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~ytlvm~DpDaP~~~~ 81 (190)
T 2iqy_A 4 MAADISQWAGPLSLQEVDE-PPQHALRVDYGGV-TVDELGKVLTPTQVMNRPSSISWDGLDPGKLYTLVLTDPDAPSRKD 81 (190)
T ss_dssp SSCCGGGTTSTTCGGGTSS-CCSEECEEECSSC-BCCSTTEECCGGGGSSCCSEEECTTCCTTSEEEEEEEESSSSCSSS
T ss_pred HHHHHHHhcCccCCcCcCC-CCCceEEEEECCC-cccCCCCEECHHHHhCCCceEEEccCCCCCEEEEEEECCCCCCCCC
Confidence 5678999 9999999998 9999999999765 7899999999999999999 99988776799999999999999999
Q ss_pred CCCceEEEEEEEccCCCcCCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHH
Q 030564 81 PYLREHLHWIVTDIPGTTDASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEE 152 (175)
Q Consensus 81 ~~~~~~lHwlv~ni~~~~~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~ 152 (175)
+++++|||||++||+++ ++..|..+++|.||+| |+|.|||+|+||+|+..+.+.+ ....|.+||+++|+++
T Consensus 82 p~~~~~~HWlv~nIp~~-~~~~G~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~~~~~~l~~~~~~~R~~F~~~~F~~~ 160 (190)
T 2iqy_A 82 PKFREWHHFLVVNMKGN-DISSGTVLSEYVGSGPPKDTGLHRYVWLVYEQEQPLNCDEPILSNKSGDNRGKFKVESFRKK 160 (190)
T ss_dssp CTTCCEEEEEEEEEETT-BGGGSEEEECCCCCCCCTTSCCEEEEEEEEECSSCCCCCSCCBCTTCCTTCSSCCHHHHHHH
T ss_pred CCcCCEEEEEEeCCChh-ccccCccccceeCCCCcCCCCceEEEEEEEEeCCccCcchhhccCCCcccCCCcCHHHHHHH
Confidence 99999999999999988 7888999999999999 7899999999999999877653 3578999999999999
Q ss_pred hCCCCceEEEEEEEeeCCCC
Q 030564 153 NDLGLPVAAVFFNAQRETAA 172 (175)
Q Consensus 153 ~~L~~Pva~~~f~~~~d~~~ 172 (175)
++|+.|||+|||+++||++.
T Consensus 161 ~~Lg~pVA~~fF~~q~d~~v 180 (190)
T 2iqy_A 161 YHLGAPVAGTCFQAEWDDSV 180 (190)
T ss_dssp TTCCSCSEEEEEEECCCTTH
T ss_pred hCCCCeeEEEEEEEEccCch
Confidence 99998999999999999853
No 4
>2jyz_A CG7054-PA, GH14779P, PEBP; PEBP/RKIP, molecular modeling, chemical shift variations, titration, unknown function; NMR {Drosophila melanogaster}
Probab=100.00 E-value=2.4e-47 Score=295.33 Aligned_cols=158 Identities=35% Similarity=0.669 Sum_probs=145.3
Q ss_pred CCcccccCCCCCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEecCCC-CcEEEEEEEcCCCCCCCCCCCceEEEE
Q 030564 11 GRVVGEVIDYFTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLGGDM-RSFFTLIMTDPDVPGPSDPYLREHLHW 89 (175)
Q Consensus 11 ~~iipdvl~~f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~~~~-~~~ytlvmvDpD~p~~~~~~~~~~lHw 89 (175)
++||||||+. .|+..|+|.|+++ ..|.+|+.|+++++..+|+|+|.+.+. +++|||+|+|||+|+++++++++||||
T Consensus 2 ~~vipdvl~~-~P~~~l~V~y~~~-~~v~~G~~l~~~~~~~~P~l~~~~~p~~t~~ytlvm~DpDaP~~~~p~~~~~~HW 79 (179)
T 2jyz_A 2 DDIVPDVLDA-VPAGTIKVIYGDD-LEVKQGNELTPTQVKDQPIVSWSGLEGKSNLLTLLMVDPDAPTRQDPKYREILHW 79 (179)
T ss_dssp CCBTTTTBSS-CCSEECEEESSSS-CCBCTTEECCSSCTTSCCEEECTTTCCSCSEEEEEEECCCSSCTTCCSSCCCSCC
T ss_pred CcccCcCcCC-CCcCeEEEEECCC-cccCCCCEeCHHHhccCCeEEEeCCCCCceeEEEEEeCCCCCCCccCCCccEEEE
Confidence 6899999999 9999999999864 789999999999999999999988754 499999999999999999999999999
Q ss_pred EEEccCCCc-CCCCCeeeeeecCCCC--CCCCCcEEEEEeeeCCCccccC------CCCCCCCcCHHHHHHHhCCCCceE
Q 030564 90 IVTDIPGTT-DASFGKEVVNYEIPRP--NIGIHRFVFLLFKQKRRQTEMS------VPASRDRFNTRKFAEENDLGLPVA 160 (175)
Q Consensus 90 lv~ni~~~~-~~~~g~~~~~Y~~P~P--~~g~HRYvflL~~Q~~~~~~~~------~~~~R~~F~~~~F~~~~~L~~Pva 160 (175)
|++||+++. ++..|..+++|.||+| |+|.|||+|+||+|+..+. .. .+..|.+||+++|+++++|+.|||
T Consensus 80 lv~nIp~~~~~l~~g~~~~~Y~gP~Pp~g~g~HRY~f~ly~q~~~l~-~~~~l~~~~~~~R~~F~~~~F~~~~~Lg~pvA 158 (179)
T 2jyz_A 80 SVVNIPGSNENPSGGHSLADYVGSGPPKDTGLHRYIFLLYRQENKIE-ETPTISNTTRTGRLNFNARDFAAKHGLGEPIA 158 (179)
T ss_dssp EEECCCTTSSSTTSSEEEECCCSCCSCGGGCSEEEEEEEEEECSCCC-CSSCBCTTCCSSSCCCCTHHHHHHTTCCSCSE
T ss_pred EEECCCCCccccCcccccccccCCCCCCCCCceEEEEEEEEcCCcCC-chhhccCCCcccCCCcCHHHHHHHhCCCCccE
Confidence 999999875 6788999999999999 7899999999999998876 21 357899999999999999998999
Q ss_pred EEEEEEeeCCC
Q 030564 161 AVFFNAQRETA 171 (175)
Q Consensus 161 ~~~f~~~~d~~ 171 (175)
+|||+++||++
T Consensus 159 ~~~F~~q~d~~ 169 (179)
T 2jyz_A 159 ANYYQAQYDDY 169 (179)
T ss_dssp EEEEEECCCTH
T ss_pred EEEEEEEecCc
Confidence 99999999984
No 5
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=100.00 E-value=3.7e-46 Score=293.13 Aligned_cols=165 Identities=22% Similarity=0.362 Sum_probs=146.0
Q ss_pred cccchhhhcCCcccccCCC--CCCCeEEEEEECCCCeeecCCceeCCcccCCCCe-EEEecCCC-CcEEEEEEEcCCCCC
Q 030564 2 AKMSDALVLGRVVGEVIDY--FTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPK-VEVLGGDM-RSFFTLIMTDPDVPG 77 (175)
Q Consensus 2 ~~~~~~l~~~~iipdvl~~--f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~-i~~~~~~~-~~~ytlvmvDpD~p~ 77 (175)
+.++++|++++|||||||. |+|++.|+|.|+++ ..|.+|+.|+++++..+|+ |+|++.+. +++|||+|+|||+|+
T Consensus 12 ~~~~~~l~~~~IipDvl~~~~f~p~~~L~V~y~~~-~~v~~G~~l~~~~~~~~P~~l~~~~~~~~~~~ytLvm~DPDaP~ 90 (200)
T 2gzq_A 12 PPTIEELKREKIIPHVFPDENVDLTVDMYISFKSG-KEVNHGNILDLAGTGSVPRNIKFSEEPPEDYCYILFMIDPDFPS 90 (200)
T ss_dssp SCCHHHHHHTTHHHHTSSSSCCCCCCCEEEEEETT-EEECSSCEEESTTCSSCCSEEEESSCCCTTEEEEEEEEETTCSC
T ss_pred HHHHHHHHhCCccCcccCCCCCcceeEEEEEECCC-cccCCCCEeCHHHHhCCCceEEEccCCCCCceEEEEEECCCCCC
Confidence 4578999999999999964 99999999999965 8999999999999999998 99998753 799999999999999
Q ss_pred CCCCCCceEEEEEEEccCCCcCCCCC-----eeeeeecCCCC--CCCCCcEEEEEe--eeCCCccccC-------CCCCC
Q 030564 78 PSDPYLREHLHWIVTDIPGTTDASFG-----KEVVNYEIPRP--NIGIHRFVFLLF--KQKRRQTEMS-------VPASR 141 (175)
Q Consensus 78 ~~~~~~~~~lHwlv~ni~~~~~~~~g-----~~~~~Y~~P~P--~~g~HRYvflL~--~Q~~~~~~~~-------~~~~R 141 (175)
++++++++|||||++||+++ ++..| ..+++|.||+| |+|.|||+|+|| +|+..+.+.. ...+|
T Consensus 91 ~~~~~~~~~~HWlv~nIp~~-~~~~g~~~~~~~~~~Y~gP~Pp~g~g~HRYvF~l~~fkQ~~~~~~~~~p~~~~~~~~~R 169 (200)
T 2gzq_A 91 RRRPDGRDYVHWAVSGIKSK-ELVKGTDKNCITLLPYVGPSIKKGTGLHRISFILSLVKEENKGNVTGVPLYRGEHYITR 169 (200)
T ss_dssp SSCCTTCSEEEEEEEEECSS-EEETTCCTTCEEEECCCCCCCCTTSCCEEEEEEEEEEEGGGTTCBTTBCCCCCGGGCCT
T ss_pred CCCCCCCCEEEEEEeCCCcC-cccCCccCCCcceeeeeCCCCcCCCCcceEEEEEEEecccCcccccccCcccccccccc
Confidence 99999999999999999986 33333 48999999999 899999999985 9998877542 12389
Q ss_pred CCcCHH----HHHHHhCCCCceEEEEEEEeeC
Q 030564 142 DRFNTR----KFAEENDLGLPVAAVFFNAQRE 169 (175)
Q Consensus 142 ~~F~~~----~F~~~~~L~~Pva~~~f~~~~d 169 (175)
.+||++ +|++++||+ |||+|||+++++
T Consensus 170 ~~F~~~~gv~~F~~~~gL~-pVganfF~~~n~ 200 (200)
T 2gzq_A 170 VKFNNCQSAYNVIQMNDMK-IVGFNWCQMRRK 200 (200)
T ss_dssp THHHHTCCHHHHHHHTTCE-EEEEEEEEEECC
T ss_pred CccccchhhHHHHHHcCCE-EEEEEEEEEecC
Confidence 999987 899999997 899999999974
No 6
>1wpx_B Carboxypeptidase Y inhibitor; carboxypeptidase inhibitor, serine proteinase inhibitor, Pro inhibitor complex; HET: NAG NDG; 2.70A {Saccharomyces cerevisiae} SCOP: b.17.1.1
Probab=100.00 E-value=4.1e-45 Score=291.09 Aligned_cols=165 Identities=30% Similarity=0.474 Sum_probs=146.5
Q ss_pred ccchhhhcCCcccccCCC--CCCCeEEEEEECCCCeeecCCceeCCcccCCCCeEEEec----------C-----CCCcE
Q 030564 3 KMSDALVLGRVVGEVIDY--FTPSVKMTITYSSIKQQVYNGHEMFPSQVTQKPKVEVLG----------G-----DMRSF 65 (175)
Q Consensus 3 ~~~~~l~~~~iipdvl~~--f~P~~~L~V~f~~~~~~v~~G~~l~~~~~~~~P~i~~~~----------~-----~~~~~ 65 (175)
.++++|++++||||||+. |.|++.|+|.|+++ ..|.+|+.|+++++...|.|+|.. . +.+++
T Consensus 11 ~~~~~l~~~~IipDvl~~~~F~P~~~L~V~y~~~-~~v~~G~~l~~~~t~~~P~v~~~~~~~~~~~~~~~~~~~p~~~~~ 89 (220)
T 1wpx_B 11 ASIDSYKKHGILEDVIHDTSFQPSGILAVEYSSS-APVAMGNTLPTEKARSKPQFQFTFNKQMQKSVPQANAYVPQDDDL 89 (220)
T ss_dssp HHHHHHHHTTHHHHTSCCTTCCCSEEEEEEEETT-EEECSSCBCCGGGGSSCCEEEEEEETTCC------CCCCCCSSCC
T ss_pred HHHHHHHhCCCCccccCCcCCCCceEEEEEECCC-cEeCCCCCcCHHHhcCCCeeEeCCCCCcccccccccccCCCCCce
Confidence 578999999999999998 99999999999985 679999999999999999999982 2 24799
Q ss_pred EEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcC--------C--------CCC-eeeeeecCCCC--CCCCCcEEEEEe
Q 030564 66 FTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTD--------A--------SFG-KEVVNYEIPRP--NIGIHRFVFLLF 126 (175)
Q Consensus 66 ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~--------~--------~~g-~~~~~Y~~P~P--~~g~HRYvflL~ 126 (175)
|+|+|+|||+|++.++++++||||+++||+++.. . +.| ...++|.||+| |+|.|||+|+||
T Consensus 90 ~~lvm~DpDaP~~~~p~~~~~~HW~v~nIp~~~~~l~~~~~~~~~g~~~~~~~~~~~~~~Y~gP~Pp~g~g~HRY~f~ly 169 (220)
T 1wpx_B 90 FTLVMTDPDAPSKTDHKWSEFCHLVECDLKLLNEATHETSGATEFFASEFNTKGSNTLIEYMGPAPPKGSGPHRYVFLLY 169 (220)
T ss_dssp EEEEEEESSSSCSSCCTTCSEEEEEEEEEEECC---------CCEEEEEEECTTCEEEECCCCCCCCTTSCCEEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCcCcEEEEEEEccCCCccccccccCCCCccceEeecCCccccccccCCCCccCCCCceEEEEEE
Confidence 9999999999999999999999999999987521 1 346 78999999999 688999999999
Q ss_pred eeCCCccccC--CCCCCCCcC-------HHHHHHHhCCCCceEEEEEEEeeC
Q 030564 127 KQKRRQTEMS--VPASRDRFN-------TRKFAEENDLGLPVAAVFFNAQRE 169 (175)
Q Consensus 127 ~Q~~~~~~~~--~~~~R~~F~-------~~~F~~~~~L~~Pva~~~f~~~~d 169 (175)
+|+..+.+.. .+..|.+|+ +++|+++++|+ |||+|||++|||
T Consensus 170 a~~~~l~~~~~~~~~~R~~f~~~~~~f~~~~F~~~~~L~-pVAanfF~~q~~ 220 (220)
T 1wpx_B 170 KQPKGVDSSKFSKIKDRPNWGYGTPATGVGKWAKENNLQ-LVASNFFYAETK 220 (220)
T ss_dssp ECCTTCCGGGSCCCCCSBGGGCCSSSCSHHHHHHTTTCE-EEEEEEEEECCC
T ss_pred ecCCcCCccccCCcccccCCCccccchhHHHHHHHhCCe-EEEEEEEEEecC
Confidence 9999877542 567888898 99999999995 899999999996
No 7
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=99.88 E-value=1.3e-22 Score=154.81 Aligned_cols=106 Identities=19% Similarity=0.280 Sum_probs=82.1
Q ss_pred eeecCCceeCCcccCC---------CCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCC-
Q 030564 36 QQVYNGHEMFPSQVTQ---------KPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFG- 103 (175)
Q Consensus 36 ~~v~~G~~l~~~~~~~---------~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g- 103 (175)
..+..|+.|+.+.+.. +|.|+|.+.. .+++|+|+|+|||+|++ ++|+||+++||+++. .+..|
T Consensus 8 ~~~~~g~~ip~~~~~~~~~~~G~n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~ 82 (166)
T 1fux_A 8 NEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTG-----SGWWHWTVVNIPATVTYLPVDA 82 (166)
T ss_dssp SSCCTTSBCCGGGBCEETTEECCCCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTT
T ss_pred cCcCCcCCCCHHHhccccccCCCCcCCeEEEeCCCCCCeEEEEEEECCCCCCC-----CcEEEeEEeCcCCCcccccCCc
Confidence 4577899999988766 9999999874 46999999999999964 479999999998753 12111
Q ss_pred -----------e-------eeeeecCCCC--CCCCCcEEEEEeeeCC-CccccCCCCCCCCcCHHHHHHH
Q 030564 104 -----------K-------EVVNYEIPRP--NIGIHRFVFLLFKQKR-RQTEMSVPASRDRFNTRKFAEE 152 (175)
Q Consensus 104 -----------~-------~~~~Y~~P~P--~~g~HRYvflL~~Q~~-~~~~~~~~~~R~~F~~~~F~~~ 152 (175)
. ....|.||+| |+|.|||+|+||+|+. .+.++ .++...++.+.
T Consensus 83 ~~~~~~~l~~g~~~g~nd~g~~~Y~GP~PP~g~g~HRY~F~lyald~~~l~l~------~~~~~~~l~~a 146 (166)
T 1fux_A 83 GRRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDKPHHYQFKVWALKTEKIPVD------SNSSGALVGYM 146 (166)
T ss_dssp TCTTCTTSCTTCEECCCTTSSSSCCCBCCCTTCCCEECEEEEEEESCSCCCCC------TTCCHHHHHHH
T ss_pred cccccccCCCCcEEeecCCCCccccCCCCcCCCCcEEEEEEEeEeccccCCCC------CCCCHHHHHHH
Confidence 1 4789999999 6779999999999997 57764 34455555433
No 8
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=99.86 E-value=7.1e-21 Score=143.25 Aligned_cols=112 Identities=20% Similarity=0.286 Sum_probs=85.5
Q ss_pred eecCCceeCCccc----CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCCe------
Q 030564 37 QVYNGHEMFPSQV----TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFGK------ 104 (175)
Q Consensus 37 ~v~~G~~l~~~~~----~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g~------ 104 (175)
.+..|..|+...+ ..+|.|+|.+.. .+++|+|+|+|||+|++.++ .++|+||+++||+++. .+..|.
T Consensus 10 ~f~~g~~ip~~~t~~G~n~SP~l~w~~~P~~tks~ali~~DpDAPs~~~~-~~~~~HWvv~nIp~~~~~l~~g~~~g~~~ 88 (153)
T 3n08_A 10 AFSYGRPIPKKYSCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPSVRE-DGLWIHWIVYNLSPVVSNLAEGAQIFAVQ 88 (153)
T ss_dssp TBCTTEECCGGGSTTSCCCCCCEEEECCCTTCCEEEEEEEETTSCTTTCT-TSCEEEEEEEEECTTCCEECTTCCCSSEE
T ss_pred CcCCCCCCCHHHcCCCCCcCcEEEEcCCCCCCeEEEEEEECCCCCCccCC-CCcEEEEEEEcCCCCcccccCCCCCCceE
Confidence 3455666666543 468999999875 46999999999999998875 4799999999999853 222221
Q ss_pred -----eeeeecCCCCCCCCCcEEEEEeeeCCCccccCCCCCCCCcCHHHHHHHhCC
Q 030564 105 -----EVVNYEIPRPNIGIHRFVFLLFKQKRRQTEMSVPASRDRFNTRKFAEENDL 155 (175)
Q Consensus 105 -----~~~~Y~~P~P~~g~HRYvflL~~Q~~~~~~~~~~~~R~~F~~~~F~~~~~L 155 (175)
....|.||+|+.|.|||+|+||+|+..+.++ .++...++.+...-
T Consensus 89 g~n~~g~~~Y~GP~PP~g~HrY~F~vyAld~~L~l~------~~~~~~~l~~a~~g 138 (153)
T 3n08_A 89 GLNTAGEIGYCPPCPPDAKHRYYFYAYALDVVLSDE------EGVTKEQLLEAMDG 138 (153)
T ss_dssp CBCTTSSBSCCCCCCSSSCEEEEEEEEEESSCCCCC------SSCCHHHHHHHHTT
T ss_pred eecCCCCccccCCcCcCCCEEEEEEEEEECCcCCCC------CCCCHHHHHHHhhh
Confidence 4689999999766799999999999987664 25666776665443
No 9
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=99.83 E-value=1.4e-20 Score=142.65 Aligned_cols=81 Identities=23% Similarity=0.374 Sum_probs=64.9
Q ss_pred CCCCeEEEecCC-CCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCc-CCCCCe------------------eeeee
Q 030564 50 TQKPKVEVLGGD-MRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTT-DASFGK------------------EVVNY 109 (175)
Q Consensus 50 ~~~P~i~~~~~~-~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~-~~~~g~------------------~~~~Y 109 (175)
..+|.|+|.+.. .+++|+|+|+|||+|++ ++|+||+++||+++. .+..|. ....|
T Consensus 30 n~sP~l~w~~~P~~t~s~ali~~DPDAP~~-----~~~~HW~v~nIp~~~~~l~~g~~~~~~~~~~g~~~g~n~~g~~~Y 104 (159)
T 1fjj_A 30 NISPHLAWDDVPAGTKSFVVTCYDPDAPTG-----SGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGY 104 (159)
T ss_dssp CCCCCEEEECCCTTCCEEEEEEEETTSTTT-----TCEEEEEEEEEETTCCEECTTGGGTSSCCCTTCEECBCTTSSBSC
T ss_pred CcCCeEEEcCCCCCCeEEEEEEECCCCCCC-----CcEEEEEEEccCCCccccCCCcccccccCCCCcEEeecCCCCCcc
Confidence 568999999874 57999999999999974 469999999998753 122111 47899
Q ss_pred cCCCCCCC-CCcEEEEEeeeCC-Ccccc
Q 030564 110 EIPRPNIG-IHRFVFLLFKQKR-RQTEM 135 (175)
Q Consensus 110 ~~P~P~~g-~HRYvflL~~Q~~-~~~~~ 135 (175)
.||+|+.| .|||+|+||+|+. .+.++
T Consensus 105 ~GP~PP~g~~HRY~F~lyald~~~l~l~ 132 (159)
T 1fjj_A 105 DGAAPPKGETHRYIFTVHALDIERIDVD 132 (159)
T ss_dssp CCBCCSTTCCEEEEEEEEEESSSCCSCC
T ss_pred cCCCCcCCCceEEEEEEEEccCcccCCC
Confidence 99999555 8999999999997 67764
No 10
>2evv_A Hypothetical protein HP0218; alpha-beta structure, dimer, structural genomics, PSI, prote structure initiative; HET: MSE; 2.59A {Helicobacter pylori}
Probab=99.79 E-value=3.5e-19 Score=139.86 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=78.1
Q ss_pred CCCCeEEEecCCCCcEEEEEEEcCCCCCCCCCCCceEEEEEEEccCCCcCCC--------------------CCeee---
Q 030564 50 TQKPKVEVLGGDMRSFFTLIMTDPDVPGPSDPYLREHLHWIVTDIPGTTDAS--------------------FGKEV--- 106 (175)
Q Consensus 50 ~~~P~i~~~~~~~~~~ytlvmvDpD~p~~~~~~~~~~lHwlv~ni~~~~~~~--------------------~g~~~--- 106 (175)
...|.|+|.+.+.+++|+|+|+|||+|++. .++|+||+++||+.+ .+. .|...
T Consensus 58 ~~Sp~L~W~~~~gtks~aLvm~DPDAP~~~---g~~~~HWvv~NI~~~-~l~eg~~~~~~g~~qG~N~~~~~~g~~~~~~ 133 (207)
T 2evv_A 58 TYSPKISWQKVEGAQSYALELIDHDAQKVC---GMPFVHWVVGNIAHN-VLEENASMMDKRIVQGVNSLTQGFIRSPLNE 133 (207)
T ss_dssp CCCCCEEECCCTTCSEEEEEEEETTHHHHH---SSCEEEEEEEEECSS-EECTTHHHHCSSSEECCCTTCSCSTTCSSCH
T ss_pred CccceEEEecCCCCeEEEEEEECCCCCCCC---CCcEEEEEEeCCCCC-ccccCcccCCCCceecccccccccccccccc
Confidence 345679998876689999999999999864 368999999999533 221 12211
Q ss_pred ----------eeecCCCCCCCCCcEEEEEeeeCC-CccccCCCCCCCCcCHHHHHHHhCCCCceEEEEEEEee
Q 030564 107 ----------VNYEIPRPNIGIHRFVFLLFKQKR-RQTEMSVPASRDRFNTRKFAEENDLGLPVAAVFFNAQR 168 (175)
Q Consensus 107 ----------~~Y~~P~P~~g~HRYvflL~~Q~~-~~~~~~~~~~R~~F~~~~F~~~~~L~~Pva~~~f~~~~ 168 (175)
..|.||+|+.|.|||+|+||+|+. .+.+. .+|...++.+...-.. +|-.-+....
T Consensus 134 ~~k~~~~~~~~~Y~GP~PP~G~HRYvF~vyALd~~~L~l~------~~~~~~~l~~am~gHv-La~a~l~g~y 199 (207)
T 2evv_A 134 SEKQRSNLNNSVYIGPMPPNGDHHYLIQVYALDIPKLALK------APFFLGDLHDKMRNHI-IAIGRKEFLY 199 (207)
T ss_dssp HHHHHHHHHTCSCCCCCCSSSCEEEEEEEEEESSSCCCCC------SSCCHHHHHHHHTTCE-EEEEEEEEEE
T ss_pred cccccccccccccCCCCCCCCcEEEEEEEEEecCccCCCC------CCCCHHHHHHHhhcCe-EEEEEEEEEE
Confidence 889999998889999999999997 66653 4577777766654332 4444444333
No 11
>3ewt_E Tumor necrosis factor receptor superfamily member 6; calmodulin-peptide complex, FAS, death domain, calcium, calcium binding protein; 2.40A {Homo sapiens}
Probab=23.27 E-value=31 Score=17.28 Aligned_cols=10 Identities=20% Similarity=0.534 Sum_probs=7.7
Q ss_pred HHHHHHHhCC.
Q 030564 146 TRKFAEENDL. 155 (175)
Q Consensus 146 ~~~F~~~~~L. 155 (175)
+.+|++++|+
T Consensus 16 Vk~fvR~~gi. 25 (25)
T 3ewt_E 16 VKGFVRKNGVx 26 (26)
T ss_pred HHHHHHHcCC.
Confidence 6788888875
Done!