BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030570
MSQLFYTLPKRLTVSPSPPLLHFNYRSSRTRLVCSKMPTESSPSPLTHSITIPSQLSQPV
HVVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGF
LKFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQVVFLYLSLI

High Scoring Gene Products

Symbol, full name Information P value
NUDX14
nudix hydrolase homolog 14 		protein from Arabidopsis thaliana 2.5e-49
DDB_G0271376 gene from Dictyostelium discoideum 2.6e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030570
        (175 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2118061 - symbol:NUDX14 "nudix hydrolase homol...   514  2.5e-49   1
DICTYBASE|DDB_G0271376 - symbol:DDB_G0271376 species:4468...   193  2.6e-15   1


>TAIR|locus:2118061 [details] [associations]
            symbol:NUDX14 "nudix hydrolase homolog 14" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA;ISS] [GO:0019144
            "ADP-sugar diphosphatase activity" evidence=IDA] [GO:0080041
            "ADP-ribose pyrophosphohydrolase activity" evidence=IDA]
            [GO:0080042 "ADP-glucose pyrophosphohydrolase activity"
            evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
            InterPro:IPR000086 InterPro:IPR015797 Pfam:PF00293 PROSITE:PS00893
            PROSITE:PS51462 GO:GO:0009570 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0046872 Gene3D:3.90.79.10
            SUPFAM:SSF55811 EMBL:AL049638 EMBL:AL161533 EMBL:AJ748742
            EMBL:AY052271 EMBL:BT001146 IPI:IPI00540616 PIR:T06605
            RefSeq:NP_567384.1 UniGene:At.48848 UniGene:At.68491
            ProteinModelPortal:Q9SZ63 STRING:Q9SZ63 PaxDb:Q9SZ63 PRIDE:Q9SZ63
            ProMEX:Q9SZ63 EnsemblPlants:AT4G11980.1 GeneID:826805
            KEGG:ath:AT4G11980 TAIR:At4g11980 eggNOG:NOG275218
            HOGENOM:HOG000174303 InParanoid:Q9SZ63 OMA:FLKFKAD PhylomeDB:Q9SZ63
            ProtClustDB:PLN03143 Genevestigator:Q9SZ63 GermOnline:AT4G11980
            GO:GO:0080042 GO:GO:0080041 Uniprot:Q9SZ63
        Length = 309

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 112/166 (67%), Positives = 131/166 (78%)

Query:     5 FYTLPKRLTVSPS---PPLLHFNYRSSRTRLVCSKMPTESSPSPLTHSITIPSQLSQPVH 61
             F  LP RL   PS   P  LH ++  ++  L C KM   SS S LT SIT+PSQ ++PV 
Sbjct:     4 FTLLPSRLLAFPSRALPRRLHHHH--AKLILRC-KM--SSSSSSLTQSITLPSQPNEPVL 58

Query:    62 VVAAPGLSESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFL 121
             V A  G+S SDFR A++S+LF+ WL+NL+SE+GILA+G M LKQVLIQGVDMFGKRIGFL
Sbjct:    59 VSATAGISSSDFRDAIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFL 118

Query:   122 KFKADIFCKETGQKVPGIVFARGPAVAVLILLDSEGETYAILTEQV 167
             KFKADIF KETGQKVPGIVFARGPAVAVLILL+S+GETYA+LTEQV
Sbjct:   119 KFKADIFDKETGQKVPGIVFARGPAVAVLILLESDGETYAVLTEQV 164


>DICTYBASE|DDB_G0271376 [details] [associations]
            symbol:DDB_G0271376 species:44689 "Dictyostelium
            discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR000086 InterPro:IPR015797 Pfam:PF00293 PROSITE:PS51462
            dictyBase:DDB_G0271376 Gene3D:3.90.79.10 SUPFAM:SSF55811
            EMBL:AAFI02000006 GO:GO:0016787 eggNOG:NOG275218 OMA:FLKFKAD
            RefSeq:XP_645669.1 ProteinModelPortal:Q55BE3
            EnsemblProtists:DDB0216797 GeneID:8617861 KEGG:ddi:DDB_G0271376
            InParanoid:Q55BE3 ProtClustDB:CLSZ2431338 Uniprot:Q55BE3
        Length = 253

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 39/100 (39%), Positives = 62/100 (62%)

Query:    69 SESDFRCAVESTLFKQWLKNLQSETGILANGDMLLKQVLIQGVDMFGKRIGFLKFKADIF 128
             +E      + +  F +W+K ++ E  +  N       + +Q VDMFGK +GFLKFKAD+ 
Sbjct:    23 NEISLETVMSAPNFNKWIKKMELEKELKVNS------ISVQSVDMFGKNVGFLKFKADVV 76

Query:   129 CKETGQKVPGIVFARGPAVAVLILLDSE--GETYAILTEQ 166
               + G+ VPGI+F RG +VA+L++L S+  G+ Y++LT Q
Sbjct:    77 TVKEGRVVPGIIFCRGGSVAILVILKSKETGKEYSVLTVQ 116


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      175       175   0.00078  109 3  11 22  0.38    32
                                                     31  0.49    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  597 (63 KB)
  Total size of DFA:  142 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.92u 0.14s 17.06t   Elapsed:  00:00:01
  Total cpu time:  16.92u 0.14s 17.06t   Elapsed:  00:00:01
  Start:  Sat May 11 06:04:59 2013   End:  Sat May 11 06:05:00 2013

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