BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030572
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q976A1|IF2P_SULTO Probable translation initiation factor IF-2 OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=infB
PE=3 SV=1
Length = 602
Score = 33.9 bits (76), Expect = 0.55, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 11/49 (22%)
Query: 94 VYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALEKTRKILTEKIAQL 142
+YAP++ ALAG+ P F+ + E+ +E+ +KI+ E+IA +
Sbjct: 316 IYAPELENALAGS-----------PLFVAENEQQIEEYKKIIQEEIASV 353
>sp|P72752|Y2009_SYNY3 Thylakoid membrane protein ssl2009 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=ssl2009 PE=4 SV=1
Length = 99
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 123 DEEKALEKTRKILTEKIAQLNSAIDDVSAQL 153
D E+ +E R+ L +KIAQLN IDDV QL
Sbjct: 52 DSEENIELARRRLEDKIAQLNLVIDDVRDQL 82
>sp|Q92G13|RFTRM_RICCN Bifunctional methyltransferase OS=Rickettsia conorii (strain ATCC
VR-613 / Malish 7) GN=prmC/trmB PE=3 SV=1
Length = 524
Score = 33.5 bits (75), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 95 YAPQISKALAGAAADRKDLMRKLPKFIYDEEKALEKTRKILTE 137
YA +I K+L+G + D KLPK+++ +EK + + RK+ E
Sbjct: 313 YARRIGKSLSGVQKNLLD--NKLPKYLFSKEKLVNEKRKVFLE 353
>sp|Q4UJU4|RFTRM_RICFE Bifunctional methyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=prmC/trmB PE=3 SV=1
Length = 527
Score = 33.5 bits (75), Expect = 0.79, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 95 YAPQISKALAGAAADRKDLMRKLPKFIYDEEKALEKTRKILTE 137
YA +I K+L+G + D +LPK+++ +EK +++ RKI E
Sbjct: 316 YARRIGKSLSGLQQNLLD--NELPKYLFSKEKLIDEKRKIFLE 356
>sp|Q62868|ROCK2_RAT Rho-associated protein kinase 2 OS=Rattus norvegicus GN=Rock2 PE=1
SV=2
Length = 1388
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 104 AGAAADRKDLMRKLPKFIYDEEKALEK---TRKILTEKIAQLNSAIDDVSAQLRTEDDDA 160
A AD+K + + D+ + L+K + +I TEK+ QL +D+ +A LRTE D A
Sbjct: 519 ADHEADKKRNLENDVNSLKDQLEDLKKRNQSSQISTEKVNQLQKQLDEANALLRTESDTA 578
>sp|P70336|ROCK2_MOUSE Rho-associated protein kinase 2 OS=Mus musculus GN=Rock2 PE=1 SV=1
Length = 1388
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 104 AGAAADRKDLMRKLPKFIYDEEKALEK---TRKILTEKIAQLNSAIDDVSAQLRTEDDDA 160
A AD+K + + D+ + L+K + +I TEK+ QL +D+ +A LRTE D A
Sbjct: 519 ADHEADKKRNLENDVNSLKDQLEDLKKRNQSSQISTEKVNQLQKQLDEANALLRTESDTA 578
>sp|O75116|ROCK2_HUMAN Rho-associated protein kinase 2 OS=Homo sapiens GN=ROCK2 PE=1 SV=4
Length = 1388
Score = 32.0 bits (71), Expect = 2.0, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 104 AGAAADRKDLMRKLPKFIYDEEKALEK---TRKILTEKIAQLNSAIDDVSAQLRTEDDDA 160
A AD+K + + D+ + L+K +I TEK+ QL +D+ +A LRTE D A
Sbjct: 519 ADHEADKKRNLENDVNSLKDQLEDLKKRNQNSQISTEKVNQLQRQLDETNALLRTESDTA 578
>sp|Q28021|ROCK2_BOVIN Rho-associated protein kinase 2 OS=Bos taurus GN=ROCK2 PE=1 SV=1
Length = 1388
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 104 AGAAADRKDLMRKLPKFIYDEEKALEK---TRKILTEKIAQLNSAIDDVSAQLRTEDDDA 160
A AD+K + + D+ + L+K +I TEK+ QL +D+ +A LRTE D A
Sbjct: 519 ADHEADKKRNLENDVNSLKDQLEDLKKRNQNSQISTEKVNQLQRQLDETNALLRTESDTA 578
>sp|Q9RYR5|HMP_DEIRA Flavohemoprotein OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=hmp PE=3 SV=1
Length = 403
Score = 31.6 bits (70), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 78 VGGFVLGGIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYD 123
VG ++LG I G LG P+I A A A + DLM + K +YD
Sbjct: 98 VGQYLLGAI-AGVLGDAAKPEILDAWAAAYGELADLMIGIEKGMYD 142
>sp|O49460|PHB1_ARATH Prohibitin-1, mitochondrial OS=Arabidopsis thaliana GN=PHB1 PE=1
SV=1
Length = 288
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 119 KFIYDEEKALEKTRKILTEKIAQLNSAIDDVS 150
+ I E + RKILTE+ A N A+DDVS
Sbjct: 147 QLITQREAVSREIRKILTERAANFNVALDDVS 178
>sp|Q60750|EPHA1_MOUSE Ephrin type-A receptor 1 OS=Mus musculus GN=Epha1 PE=1 SV=2
Length = 977
Score = 30.8 bits (68), Expect = 4.5, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
Query: 20 SGSFLKPLDLCLGSNTPANLSFSPNHQWKVQLSSSRRRPFKVHASNSEGGRANSAGFFVG 79
+G+ L + LGS+ + SP+ +W V + + P +S + G A GF+
Sbjct: 229 AGTCLSHAQISLGSSGTPRMHCSPDGEWLVPVGQCQCEPGYEESSGNVGCTACPTGFY-- 286
Query: 80 GFVLGGIIVGTLGCVYAPQISKA 102
+ + TL C+ PQ S A
Sbjct: 287 -----RVDMNTLRCLKCPQHSIA 304
>sp|Q9FFH5|PHB7_ARATH Prohibitin-7, mitochondrial OS=Arabidopsis thaliana GN=PHB7 PE=1
SV=1
Length = 278
Score = 29.6 bits (65), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 120 FIYDEEKALEKTRKILTEKIAQLNSAIDDVS 150
I E + RKI+TE+ A+ N A+DDVS
Sbjct: 148 LITQREAVSREIRKIVTERAAKFNIALDDVS 178
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,307,679
Number of Sequences: 539616
Number of extensions: 2397144
Number of successful extensions: 7262
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7244
Number of HSP's gapped (non-prelim): 33
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)