Query 030572
Match_columns 175
No_of_seqs 101 out of 110
Neff 3.4
Searched_HMMs 13730
Date Tue Mar 26 01:47:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030572.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030572hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ciya3 f.1.3.1 (A:33-255) del 49.5 7.9 0.00058 29.3 4.1 60 85-153 23-82 (223)
2 d1st6a6 a.24.9.1 (A:647-718) V 45.3 9.1 0.00066 25.3 3.3 26 124-149 45-70 (72)
3 d1dlca3 f.1.3.1 (A:61-289) del 35.3 16 0.0012 27.6 3.8 26 129-154 63-88 (229)
4 d1i5pa3 f.1.3.1 (A:1-263) delt 35.2 11 0.00081 29.5 2.9 27 129-155 107-133 (263)
5 d1r8da_ a.6.1.3 (A:) Multidrug 29.8 45 0.0033 21.6 5.0 31 126-156 78-108 (109)
6 d1h6ga1 a.24.9.1 (A:377-507) a 27.0 39 0.0029 23.8 4.5 27 124-150 104-130 (131)
7 d1g7oa1 a.45.1.1 (A:76-215) Gl 26.3 80 0.0058 22.6 6.2 76 87-171 18-98 (140)
8 d1q90g_ f.23.26.1 (G:) PetG su 26.0 24 0.0018 19.8 2.5 20 77-96 5-24 (30)
9 d1jb0l_ f.31.1.1 (L:) Photosys 25.1 20 0.0015 26.8 2.6 24 74-97 114-137 (151)
10 d1t3ua_ d.244.1.1 (A:) ZapA ho 23.0 60 0.0044 20.4 4.5 22 128-149 68-89 (92)
11 d1fxkc_ a.2.5.1 (C:) Prefoldin 21.5 55 0.004 21.8 4.3 29 127-155 99-127 (133)
12 d1ivsa1 a.2.7.3 (A:797-862) Va 21.3 66 0.0048 19.5 4.3 29 128-156 2-30 (66)
13 d1fxkc_ a.2.5.1 (C:) Prefoldin 20.6 54 0.0039 21.9 4.0 11 95-105 81-91 (133)
14 d1t5ja_ a.209.1.1 (A:) Hypothe 20.2 25 0.0018 26.1 2.3 22 78-99 8-29 (301)
No 1
>d1ciya3 f.1.3.1 (A:33-255) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=49.47 E-value=7.9 Score=29.32 Aligned_cols=60 Identities=12% Similarity=0.251 Sum_probs=28.3
Q ss_pred HHHHHHhHHhhcccchHHHHhhhhhhHHHHhhCCCcchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhh
Q 030572 85 GIIVGTLGCVYAPQISKALAGAAADRKDLMRKLPKFIYDEEKALEKTRKILTEKIAQLNSAIDDVSAQL 153 (175)
Q Consensus 85 GaVGGvlGlL~APR~~kel~~~l~d~k~~~~~~p~~~~dee~~iE~arr~Le~kIaqLN~AIddvr~QL 153 (175)
|.+.|+++++. |...++..+. ++++..++..+ +..|.++..+..++.-|+.+++.....+
T Consensus 23 g~~~~li~~lw-p~~~~~~W~~------~~~~ve~LId~--ki~~~~~~~a~~~l~gL~~~l~~Y~~al 82 (223)
T d1ciya3 23 GFVLGLVDIIW-GIFGPSQWDA------FLVQIEQLINQ--RIEEFARNQAISRLEGLSNLYQIYAESF 82 (223)
T ss_dssp HHHHHHHHHTT-SCCSHHHHHH------HHHHHHHHHTC--CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCccHHHH------HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777776 6666665542 22222222211 1223344555555555555555543333
No 2
>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=45.34 E-value=9.1 Score=25.27 Aligned_cols=26 Identities=8% Similarity=0.313 Sum_probs=23.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHH
Q 030572 124 EEKALEKTRKILTEKIAQLNSAIDDV 149 (175)
Q Consensus 124 ee~~iE~arr~Le~kIaqLN~AIddv 149 (175)
+.+.+|.-++.|++.+.+|-.++|++
T Consensus 45 a~En~e~~~~~W~~~v~~l~~~vDei 70 (72)
T d1st6a6 45 AYEHFETMKNQWIDNVEKMTGLVDEA 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 56689999999999999999999874
No 3
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=35.33 E-value=16 Score=27.57 Aligned_cols=26 Identities=12% Similarity=0.275 Sum_probs=14.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhc
Q 030572 129 EKTRKILTEKIAQLNSAIDDVSAQLR 154 (175)
Q Consensus 129 E~arr~Le~kIaqLN~AIddvr~QL~ 154 (175)
+.++..+..++.-|+.++++....+.
T Consensus 63 ~~~~~~~~~~l~gL~~~l~~Y~~al~ 88 (229)
T d1dlca3 63 DYAKNKALAELQGLQNNVEDYVSALS 88 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666666666666444443
No 4
>d1i5pa3 f.1.3.1 (A:1-263) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]}
Probab=35.23 E-value=11 Score=29.49 Aligned_cols=27 Identities=15% Similarity=0.246 Sum_probs=17.0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHhhcc
Q 030572 129 EKTRKILTEKIAQLNSAIDDVSAQLRT 155 (175)
Q Consensus 129 E~arr~Le~kIaqLN~AIddvr~QL~~ 155 (175)
|.++..+..++.-|+..++.....+..
T Consensus 107 ~~~~~~a~~~l~gL~~~l~~Y~~al~~ 133 (263)
T d1i5pa3 107 TDTLARVNAELIGLQANIREFNQQVDN 133 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666777777777775555543
No 5
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=29.78 E-value=45 Score=21.56 Aligned_cols=31 Identities=23% Similarity=0.394 Sum_probs=25.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHhhccc
Q 030572 126 KALEKTRKILTEKIAQLNSAIDDVSAQLRTE 156 (175)
Q Consensus 126 ~~iE~arr~Le~kIaqLN~AIddvr~QL~~~ 156 (175)
..++..++.+++++++|++.|+...+.+...
T Consensus 78 ~~l~~~~~~l~~~~~~l~~~~~~l~~~l~~i 108 (109)
T d1r8da_ 78 AALQSQKEILMKKKQRMDEMIQTIDRTLLSV 108 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3567777889999999999999988888765
No 6
>d1h6ga1 a.24.9.1 (A:377-507) alpha-catenin {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.03 E-value=39 Score=23.81 Aligned_cols=27 Identities=15% Similarity=0.411 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 030572 124 EEKALEKTRKILTEKIAQLNSAIDDVS 150 (175)
Q Consensus 124 ee~~iE~arr~Le~kIaqLN~AIddvr 150 (175)
+.+.+|.-++.|++++..|-.++|++.
T Consensus 104 a~en~e~~~~~W~~~v~~L~~~vd~it 130 (131)
T d1h6ga1 104 AQENMDLFKEQWEKQVRVLTDAVDDIT 130 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456899999999999999999999875
No 7
>d1g7oa1 a.45.1.1 (A:76-215) Glutaredoxin 2 {Escherichia coli [TaxId: 562]}
Probab=26.26 E-value=80 Score=22.61 Aligned_cols=76 Identities=13% Similarity=0.178 Sum_probs=45.9
Q ss_pred HHHHhHHhhcccchHHHHhhhh-----hhHHHHhhCCCcchhHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 030572 87 IVGTLGCVYAPQISKALAGAAA-----DRKDLMRKLPKFIYDEEKALEKTRKILTEKIAQLNSAIDDVSAQLRTEDDDAP 161 (175)
Q Consensus 87 VGGvlGlL~APR~~kel~~~l~-----d~k~~~~~~p~~~~dee~~iE~arr~Le~kIaqLN~AIddvr~QL~~~~~~~~ 161 (175)
|++.+--|+-||..+.... | .++-+..+......| .|....+-.+-|+++|..+++...-+... +..
T Consensus 18 v~~~~~kL~~PR~~~~~lp--EF~T~~A~~~f~~kKe~~~g~----f~~~l~~t~~li~~l~~~L~~L~~ll~~~--~~~ 89 (140)
T d1g7oa1 18 VNGYANKLLLPRFAKSAFD--EFSTPAARKYFVDKKEASAGN----FADLLAHSDGLIKNISDDLRALDKLIVKP--NAV 89 (140)
T ss_dssp HHHHHHHHHHHHHHHTTCG--GGCSHHHHHHHHTTTTTTCTH----HHHHHHHHHHHHHHHHHHHHHHHHHCSSS--SCT
T ss_pred HHHHHHHHhcCcccCCCCc--ccCCHHHHHHHHHhhhhhcCC----HHHHHHcCHHHHHHHHHHHHHHHHHHhCc--ccc
Confidence 5666777778887654332 2 112244444444443 55666666678999999999988777665 344
Q ss_pred CCcccCCccc
Q 030572 162 NGVAVNSGEV 171 (175)
Q Consensus 162 n~~~~~~~e~ 171 (175)
||. ++-|+|
T Consensus 90 ~~~-ls~DDi 98 (140)
T d1g7oa1 90 NGE-LSEDDI 98 (140)
T ss_dssp TSS-CCHHHH
T ss_pred CCC-ccHHHH
Confidence 443 444443
No 8
>d1q90g_ f.23.26.1 (G:) PetG subunit of the cytochrome b6f complex {Chlamydomonas reinhardtii [TaxId: 3055]}
Probab=26.02 E-value=24 Score=19.85 Aligned_cols=20 Identities=30% Similarity=0.413 Sum_probs=16.6
Q ss_pred hhhHHHHHHHHHHHhHHhhc
Q 030572 77 FVGGFVLGGIIVGTLGCVYA 96 (175)
Q Consensus 77 Fl~G~llGGaVGGvlGlL~A 96 (175)
++.|.++|-+--.+.|+.++
T Consensus 5 ll~GivlGlipiTl~Glfv~ 24 (30)
T d1q90g_ 5 LLCGIVLGLVPVTIAGLFVT 24 (30)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHhhHHHHHHHHHHH
Confidence 67889999888888888765
No 9
>d1jb0l_ f.31.1.1 (L:) Photosystem I reaction center subunit XI, PsaL {Synechococcus elongatus [TaxId: 32046]}
Probab=25.09 E-value=20 Score=26.77 Aligned_cols=24 Identities=17% Similarity=0.272 Sum_probs=19.4
Q ss_pred cchhhhHHHHHHHHHHHhHHhhcc
Q 030572 74 AGFFVGGFVLGGIIVGTLGCVYAP 97 (175)
Q Consensus 74 ~ggFl~G~llGGaVGGvlGlL~AP 97 (175)
.+-|-+||++||.=|.+.++++-.
T Consensus 114 Ws~F~~GF~~Gg~GGa~fAy~Ll~ 137 (151)
T d1jb0l_ 114 WSQFTAGFFVGAMGSAFVAFFLLE 137 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhchhhhccccHHHHHHHHHc
Confidence 457888999999988888877653
No 10
>d1t3ua_ d.244.1.1 (A:) ZapA homologue PA5227 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=23.01 E-value=60 Score=20.42 Aligned_cols=22 Identities=18% Similarity=0.360 Sum_probs=13.8
Q ss_pred HHHHHHhHHHHHHHHHHHHHHH
Q 030572 128 LEKTRKILTEKIAQLNSAIDDV 149 (175)
Q Consensus 128 iE~arr~Le~kIaqLN~AIddv 149 (175)
.+.....++++|.+|...|+.+
T Consensus 68 ~~~~~~~~~~~i~~L~~~ie~a 89 (92)
T d1t3ua_ 68 LDQESSSTRERVRELLDRVDRA 89 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455667777777777654
No 11
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.49 E-value=55 Score=21.80 Aligned_cols=29 Identities=21% Similarity=0.284 Sum_probs=19.3
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhhcc
Q 030572 127 ALEKTRKILTEKIAQLNSAIDDVSAQLRT 155 (175)
Q Consensus 127 ~iE~arr~Le~kIaqLN~AIddvr~QL~~ 155 (175)
.++...+.+++.+.++++.|..+.+++.+
T Consensus 99 ~l~~~~~~l~~~~~~~~~~i~~l~~~~~~ 127 (133)
T d1fxkc_ 99 ELESTLQKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666777777777777776666554
No 12
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=21.27 E-value=66 Score=19.46 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=23.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhhccc
Q 030572 128 LEKTRKILTEKIAQLNSAIDDVSAQLRTE 156 (175)
Q Consensus 128 iE~arr~Le~kIaqLN~AIddvr~QL~~~ 156 (175)
++.-+.+|+.+++.|+.-|+.+...|.+.
T Consensus 2 ~~~E~~RL~K~l~kl~~~i~~~~~kL~N~ 30 (66)
T d1ivsa1 2 VEEWRRRQEKRLKELLALAERSQRKLASP 30 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCh
Confidence 45567778999999999999988888765
No 13
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=20.59 E-value=54 Score=21.86 Aligned_cols=11 Identities=0% Similarity=-0.284 Sum_probs=4.4
Q ss_pred hcccchHHHHh
Q 030572 95 YAPQISKALAG 105 (175)
Q Consensus 95 ~APR~~kel~~ 105 (175)
|+.+...+...
T Consensus 81 ~vE~~~~eA~~ 91 (133)
T d1fxkc_ 81 AIKKNFEDAME 91 (133)
T ss_dssp EEEEEHHHHHH
T ss_pred eeeecHHHHHH
Confidence 34444444333
No 14
>d1t5ja_ a.209.1.1 (A:) Hypothetical protein MJ1187 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=20.22 E-value=25 Score=26.09 Aligned_cols=22 Identities=27% Similarity=0.341 Sum_probs=17.3
Q ss_pred hhHHHHHHHHHHHhHHhhcccc
Q 030572 78 VGGFVLGGIIVGTLGCVYAPQI 99 (175)
Q Consensus 78 l~G~llGGaVGGvlGlL~APR~ 99 (175)
+.|.++|.+||-.+|.-+--..
T Consensus 8 ~~GallG~avGDAlG~p~e~~~ 29 (301)
T d1t5ja_ 8 ILGSVFGAVIGDALGMPTENLT 29 (301)
T ss_dssp HHHHHHHHHHHHHHHGGGTTBC
T ss_pred HHHHHHHHHHHHHccchhcCCC
Confidence 4689999999999997665443
Done!