BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030574
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GYN9|MENB_ARATH 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal OS=Arabidopsis
thaliana GN=MENB PE=1 SV=2
Length = 337
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/173 (68%), Positives = 143/173 (82%), Gaps = 4/173 (2%)
Query: 4 QIDSARRRMTAVANHLVPVISSDSNSGFIGLNNAS-MNDSYHRIHGEVPSHDVVWR---I 59
++ SA RR++ V NHL+P+ S + + + L +AS M+D +H++HGEVP+H+VVW+
Sbjct: 6 ELGSASRRLSVVTNHLIPIGFSPARADSVELCSASSMDDRFHKVHGEVPTHEVVWKKTDF 65
Query: 60 ACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
+ EF DIIYEKA+ EGIAKITINRP+RRNAFRP TVKEL+RAFNDARDDSSVGVI
Sbjct: 66 FGEGDNKEFVDIIYEKALDEGIAKITINRPERRNAFRPQTVKELMRAFNDARDDSSVGVI 125
Query: 120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
ILTGKGT+AFCSGGDQALRT+DGYAD + GRLNVLDLQVQIRRLPKPVIAMV
Sbjct: 126 ILTGKGTKAFCSGGDQALRTQDGYADPNDVGRLNVLDLQVQIRRLPKPVIAMV 178
>sp|Q9CLV5|MENB_PASMU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Pasteurella multocida
(strain Pm70) GN=menB PE=3 SV=1
Length = 285
Score = 133 bits (334), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/124 (56%), Positives = 87/124 (70%), Gaps = 3/124 (2%)
Query: 51 PSHDVVWR-IACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFND 109
P DV++ I + +TDI+Y K++ +GIAKITINRP+ RNAFRP TVKE+I+AF D
Sbjct: 4 PKDDVLYAPIEWQDHSEGYTDILYHKSL-DGIAKITINRPEVRNAFRPQTVKEMIQAFAD 62
Query: 110 ARDDSSVGVIILTGKGTEAFCSGGDQALRT-RDGYADYENFGRLNVLDLQVQIRRLPKPV 168
AR D +GVI+LTG+G +AFCSGGDQ +R GY D LNVLD Q IR PKPV
Sbjct: 63 ARFDEQIGVIVLTGQGEKAFCSGGDQKVRGDYGGYQDESGVHHLNVLDFQRDIRTCPKPV 122
Query: 169 IAMV 172
+AMV
Sbjct: 123 VAMV 126
>sp|Q7CQ56|MENB_SALTY 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=menB PE=1 SV=1
Length = 285
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 86/128 (67%), Gaps = 11/128 (8%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E +TDI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---YTDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D +VGVIILTG+G +AFC+GGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNVGVIILTGEGDKAFCAGGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMV 172
PKPV+AMV
Sbjct: 119 PKPVVAMV 126
>sp|P0ABU0|MENB_ECOLI 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli (strain
K12) GN=menB PE=1 SV=1
Length = 285
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMV 172
PKPV+AMV
Sbjct: 119 PKPVVAMV 126
>sp|P0ABU1|MENB_ECOL6 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=menB PE=3 SV=1
Length = 285
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/128 (57%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 46 IHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIR 105
++ V HD C E F DI YEK+ +GIAKITINRP RNAFRP TVKE+I+
Sbjct: 9 LYAPVEWHD------CSEG---FEDIRYEKST-DGIAKITINRPQVRNAFRPLTVKEMIQ 58
Query: 106 AFNDARDDSSVGVIILTGKGTEAFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRL 164
A DAR D ++GVIILTG G +AFCSGGDQ +R GY D LNVLD Q QIR
Sbjct: 59 ALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTC 118
Query: 165 PKPVIAMV 172
PKPV+AMV
Sbjct: 119 PKPVVAMV 126
>sp|P44960|MENB_HAEIN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=menB PE=3
SV=1
Length = 285
Score = 125 bits (315), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
++DI Y K+ +GIAKITINRP+ RNAFRP TVKE++ AF+DAR D ++GVI+LTG+G +
Sbjct: 22 YSDIRYHKST-DGIAKITINRPEVRNAFRPQTVKEMMTAFSDARFDENIGVIVLTGEGEK 80
Query: 128 AFCSGGDQALR-TRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
AFCSGGDQ +R GY D LNVLD Q IR PKPV+AMV
Sbjct: 81 AFCSGGDQKVRGDYGGYKDDSGVHHLNVLDFQRDIRSCPKPVVAMV 126
>sp|Q5HQC3|MENB_STAEQ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=menB PE=3
SV=1
Length = 272
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 80/110 (72%), Gaps = 2/110 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 6 ETLREYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
G+G +AFCSGGDQ R GY ++ RLNVLDLQ IR +PKPVIAMV
Sbjct: 64 GEGDKAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMV 113
>sp|Q4L549|MENB_STAHJ 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=menB PE=3 SV=1
Length = 272
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 66/110 (60%), Positives = 79/110 (71%), Gaps = 2/110 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD ++ VIILT
Sbjct: 6 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNISVIILT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
G+G +AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 64 GEGDKAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRVIPKPVIAMV 113
>sp|Q8CPQ4|MENB_STAES 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=menB PE=3 SV=1
Length = 272
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LTG+G
Sbjct: 10 EYDEIKYE--FFEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGD 67
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
+AFCSGGDQ R GY ++ RLNVLDLQ IR +PKPVIAMV
Sbjct: 68 KAFCSGGDQKKRGHGGYVGEDDIPRLNVLDLQRLIRVIPKPVIAMV 113
>sp|Q49WG8|MENB_STAS1 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=menB PE=3 SV=1
Length = 272
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 81/110 (73%), Gaps = 2/110 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE + +GIAK+TINRP+ RNAF P+TV+E+I AF ARDD + VIILT
Sbjct: 6 ETIREYKEIKYE--LYDGIAKVTINRPEVRNAFTPNTVQEMIDAFTRARDDQRISVIILT 63
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
G+G +AFCSGGDQ +R GY + RLNVLDLQ IR +PKPV+AMV
Sbjct: 64 GEGDKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMV 113
>sp|Q8NXA0|MENB_STAAW 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MW2) GN=menB PE=3 SV=1
Length = 273
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|Q6GAG7|MENB_STAAS 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MSSA476) GN=menB PE=3 SV=1
Length = 273
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVSEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|Q6GI37|MENB_STAAR 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain MRSA252) GN=menB PE=3 SV=1
Length = 273
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|Q5HH38|MENB_STAAC 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain COL) GN=menB PE=1 SV=1
Length = 273
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|Q7A6A9|MENB_STAAN 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain N315) GN=menB PE=1 SV=1
Length = 273
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|Q99V48|MENB_STAAM 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=menB PE=1 SV=1
Length = 273
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Query: 63 ESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
E+ E+ +I YE EGIAK+TINRP+ RNAF P TV E+I AF+ ARDD +V VI+LT
Sbjct: 7 ETLREYDEIKYE--FYEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLT 64
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G+G AFCSGGDQ R GY + RLNVLDLQ IR +PKPVIAMV
Sbjct: 65 GEGDLAFCSGGDQKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVK 115
>sp|P23966|MENB_BACSU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Bacillus subtilis (strain
168) GN=menB PE=1 SV=2
Length = 271
Score = 123 bits (308), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 68 FTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTE 127
+ +I+YE GIAKITINRP+ NAF P TV E+I AF DARDD +VGVI+L G G +
Sbjct: 10 YDEILYETY--NGIAKITINRPEVHNAFTPKTVAEMIDAFADARDDQNVGVIVLAGAGDK 67
Query: 128 AFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
AFCSGGDQ +R GY + RLNVLDLQ IR +PKPV+AMV
Sbjct: 68 AFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVVAMV 112
>sp|Q9TM10|MENB_CYACA 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Cyanidium caldarium
GN=menB PE=3 SV=1
Length = 268
Score = 114 bits (285), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 75/106 (70%), Gaps = 2/106 (1%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
+F DI Y K + I++I I+RP NAFRP T+ E+I AF D+R+DSS+GV+IL+G G+
Sbjct: 8 DFIDIKYIKQ--DQISEIIISRPQVLNAFRPRTINEIIAAFYDSREDSSIGVVILSGHGS 65
Query: 127 EAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
AFC GGDQ +R++ GY D + LNVL+LQ IR PKPVIA V
Sbjct: 66 RAFCVGGDQKIRSKTGYIDEKGRSSLNVLELQRIIRTFPKPVIAKV 111
>sp|O06414|MENB_MYCTU 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium
tuberculosis GN=menB PE=1 SV=1
Length = 314
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 76/139 (54%), Gaps = 18/139 (12%)
Query: 51 PSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDA 110
P WR+ + + TDI Y + V + ++ NRP+ RNAFRPHTV EL R + A
Sbjct: 19 PFDAKAWRLV--DGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHA 76
Query: 111 RDDSSVGVIILTGKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNV 154
R VGV++LTG G AFCSGGDQ +R R GY D GRL++
Sbjct: 77 RMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHI 136
Query: 155 LDLQVQIRRLPKPVIAMVH 173
L++Q IR +PK VI +V+
Sbjct: 137 LEVQRLIRFMPKVVICLVN 155
>sp|A0QRD3|MENB_MYCS2 1,4-Dihydroxy-2-naphthoyl-CoA synthase OS=Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155) GN=menB PE=1 SV=1
Length = 309
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 73/127 (57%), Gaps = 20/127 (15%)
Query: 67 EFTDIIYEKAVGEG----IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
+ TDI Y + V +G ++ +RP+ RNAFRPHTV EL R + AR S VGVI+LT
Sbjct: 24 DLTDITYHRHVLDGARQPTVRVAFDRPEVRNAFRPHTVDELYRVLDHARMSSDVGVILLT 83
Query: 123 GKGTE------AFCSGGDQALRTRDGY----------ADYENFGRLNVLDLQVQIRRLPK 166
G G AFCSGGDQ +R R GY D GRL++L++Q IR +PK
Sbjct: 84 GNGPSPKDGGWAFCSGGDQRIRGRTGYQYASGETAETVDPARAGRLHILEVQRLIRFMPK 143
Query: 167 PVIAMVH 173
VI +V+
Sbjct: 144 VVICLVN 150
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
IT+NRPD+ NA ++EL RA + A D + VII+TGKG +AFC+G D +
Sbjct: 17 ITLNRPDKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKG-KAFCAGADITQFNQLTP 75
Query: 144 ADYENFGRL--NVLDLQVQIRRLPKPVIAMVH 173
A+ F + ++D +I L KP IAM++
Sbjct: 76 AEAWKFSKKGREIMD---KIEALSKPTIAMIN 104
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 67 EFTDIIYEKAVGEG-IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKG 125
E ++I EK EG +A +TINRP NA T+KE+ + +DS V +ILTG G
Sbjct: 2 ELNNVILEK---EGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVILTGAG 58
Query: 126 TEAFCSGGDQALRTRDGYADYENFGRLNVLDLQV--QIRRLPKPVIAMVH 173
++F +G D + + FG +L +V ++ L KPVIA V+
Sbjct: 59 EKSFVAGADISEMKEMNTIEGRKFG---ILGNKVFRRLELLEKPVIAAVN 105
>sp|P64014|ECHA6_MYCTU Probable enoyl-CoA hydratase echA6 OS=Mycobacterium tuberculosis
GN=echA6 PE=1 SV=1
Length = 243
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
E + I + RP+RRNA V+EL +A A D S I+LTG+GT AFC+G D
Sbjct: 8 EAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD---L 62
Query: 139 TRDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
+ D + ADY + +++L + P PV+ ++ P
Sbjct: 63 SGDAFAADYPD----RLIELHKAMDASPMPVVGAINGP 96
>sp|P64015|ECHA6_MYCBO Probable enoyl-CoA hydratase echA6 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA6 PE=3 SV=1
Length = 243
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
E + I + RP+RRNA V+EL +A A D S I+LTG+GT AFC+G D
Sbjct: 8 EAVLTIELQRPERRNALNSQLVEELTQAIRKA-GDGSARAIVLTGQGT-AFCAGAD---L 62
Query: 139 TRDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
+ D + ADY + +++L + P PV+ ++ P
Sbjct: 63 SGDAFAADYPD----RLIELHKAMDASPMPVVGAINGP 96
>sp|Q8DSN0|FABM_STRMU Trans-2-decenoyl-[acyl-carrier-protein] isomerase OS=Streptococcus
mutans serotype c (strain ATCC 700610 / UA159) GN=fabM
PE=3 SV=1
Length = 263
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 67 EFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGT 126
+F +I+Y V G+A +T+NRP+ N F +E+++A + A+ D +V ++++ G
Sbjct: 2 DFKEILYN--VDNGVATLTLNRPEVSNGFNIPICEEILKAIDIAKKDDTVQILLINANG- 58
Query: 127 EAFCSGGDQALRTRDGYA-DYENFGRLNVL--DLQVQIRRLPKPVI 169
+ F GGD R A D ++ R+ L + ++RLPKPV+
Sbjct: 59 KVFSVGGDLVEMQRAVDADDVQSLVRIAELVNKISFALKRLPKPVV 104
>sp|Q9WUR2|ECI2_MOUSE Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2
PE=1 SV=2
Length = 391
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 49 EVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFN 108
E PS + DE E DI+ +GI KIT NRP ++NA +++I A
Sbjct: 121 EAPSQG---KRGADEKARESKDILVTSE--DGITKITFNRPTKKNAISFQMYRDIILALK 175
Query: 109 DARDDSSVGVIILTGKGTEAFCSGGDQALRTR--DGYADYENFGRLNVLDLQVQIRRLPK 166
+A D++V + + TG G + +CSG D T G + + G + + D PK
Sbjct: 176 NASTDNTV-MAVFTGTG-DYYCSGNDLTNFTSATGGIEEAASNGAVLLRDFVNSFIDFPK 233
Query: 167 PVIAMVHLP 175
P++A+V+ P
Sbjct: 234 PLVAVVNGP 242
>sp|O69762|HCHL_PSEFL Hydroxycinnamoyl-CoA hydratase-lyase OS=Pseudomonas fluorescens
PE=1 SV=1
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
+ +GIA + +NRP++RNA P +E+I D + GV++LTG G EA+ +G D
Sbjct: 15 IEDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAG-EAWTAGMDLK 73
Query: 137 LRTRDGYADYENFG---RLNVLDLQVQIRRL-PKPVIAMVH 173
R+ A E R Q ++ R+ KP IAMV+
Sbjct: 74 EYFREVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVN 114
>sp|A5JTM5|CBADH_PSEUC 4-chlorobenzoyl coenzyme A dehalogenase OS=Pseudomonas sp. (strain
CBS-3) PE=1 SV=1
Length = 269
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 5/100 (5%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
V +G+A+ITI P RNA ++E+ A N A +D SVG +++TG +AFC+G
Sbjct: 9 VEDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITG-AEDAFCAGFYLR 67
Query: 137 LRTRD----GYADYENFGRLNVLDLQVQIRRLPKPVIAMV 172
D G D+ G L + +I R+ +PV+A +
Sbjct: 68 EIPLDKGVAGVRDHFRIGALWWHQMIHKIIRVKRPVLAAI 107
>sp|Q3TLP5|ECHD2_MOUSE Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Mus musculus GN=Echdc2 PE=2 SV=2
Length = 296
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 57 WRIA----CDESGTEFTDIIYEKAV---GEGIAKITINRPDRRNAFRPHTVKELIRAFND 109
WR + C T T I +A+ +GI +I +NRP+ RNA V EL+ A
Sbjct: 15 WRFSGARDCASHATTRTPEIQVQALTGPNQGITEILMNRPNARNALGNVFVSELLEALAQ 74
Query: 110 ARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVL-DLQVQIRRLPKPV 168
R+D V V++ FC+G D L+ R+ +D E + L L +I P P
Sbjct: 75 LREDQQVRVLLFRSAVKGVFCAGAD--LKEREQMSDVEVGTFVQRLRGLMSEIAAFPVPT 132
Query: 169 IA 170
IA
Sbjct: 133 IA 134
>sp|Q50130|ECHA6_MYCLE Probable enoyl-CoA hydratase echA6 OS=Mycobacterium leprae (strain
TN) GN=echA6 PE=3 SV=1
Length = 247
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 78 GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARD-DSSVG--VIILTGKGTEAFCSGGD 134
EG+ I + RP+RRNA +++L A A DS V VI+LTG+GT FC+G D
Sbjct: 7 AEGVMTIELQRPERRNALNSQLIEKLREAVQKASSADSEVSTRVIVLTGQGT-VFCAGAD 65
Query: 135 QALRTRDGY-ADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
+ D + ADY + +++L + +P PVI ++ P
Sbjct: 66 ---LSGDAFAADYPD----RLIELHRVMDAVPMPVIGAINGP 100
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA ++EL +A +D +VG I+LT
Sbjct: 29 SGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G G +AF +G D + D + L+ D I R+ KPVIA V+
Sbjct: 89 G-GEKAFAAGADIKEMQNRTFQDCYSGKFLSHWD---HITRIKKPVIAAVN 135
>sp|Q9LKJ1|HIBC1_ARATH 3-hydroxyisobutyryl-CoA hydrolase 1 OS=Arabidopsis thaliana GN=CHY1
PE=1 SV=1
Length = 378
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRD 141
+T+NRP + NA H + L++ F +D SV ++IL G G AFC+GGD A RD
Sbjct: 22 LTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRD 78
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA ++EL +A D +VG I+LT
Sbjct: 29 SGANFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G G +AF +G D + D + L+ D I R+ KPVIA V+
Sbjct: 89 G-GDKAFAAGADIKEMQNRTFQDCYSSKFLSHWD---HITRVKKPVIAAVN 135
>sp|Q7U004|ECH12_MYCBO Probable enoyl-CoA hydratase echA12 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA12 PE=3 SV=1
Length = 285
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
IA+IT+NRP+R N+ + L A D+SV V++LTG G F SG D ++
Sbjct: 29 IAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAG-RGFSSGADH--KSA 85
Query: 141 DGYADYENFGR-------LNVL-DLQVQIRRLPKPVIAMVHLP 175
EN R + +L D+ + +RRL +PVIA V+ P
Sbjct: 86 GVVPHVENLTRPTYALRSMELLDDVILMLRRLHQPVIAAVNGP 128
>sp|O34893|YNGF_BACSU Putative enoyl-CoA hydratase/isomerase YngF OS=Bacillus subtilis
(strain 168) GN=yngF PE=3 SV=1
Length = 260
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
E +A IT+NRP NA ++ L + +S++ +ILTG G +AFC+G D L+
Sbjct: 12 EHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGAD--LK 69
Query: 139 TRDGYADYENFGRLNVLDLQVQIR-RLPKPVIAMVH 173
R + + ++++ + LP+PVIA ++
Sbjct: 70 ERIKLKEDQVLESVSLIQRTAALLDALPQPVIAAIN 105
>sp|Q2TBT3|ECHD2_BOVIN Enoyl-CoA hydratase domain-containing protein 2, mitochondrial
OS=Bos taurus GN=ECHDC2 PE=2 SV=1
Length = 296
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+GIA+I +NRP RNA V +L+ A R+D V V+I FC+G D R
Sbjct: 44 QGIAEILMNRPSARNALGNVFVSQLLEALAQLREDRQVRVLIFRSGVKGVFCAGADLKER 103
Query: 139 TRDGYADYENFGRLNVLDLQVQIRRLPKPVIA 170
+ A+ F + + L +I P P IA
Sbjct: 104 EQMSEAEVGLFVQ-RLRGLMTEIAAFPAPTIA 134
>sp|Q58EB4|HIBCH_DANRE 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio
GN=hibch PE=2 SV=1
Length = 382
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 44 HRIHGEVPSHDVVWRIACDESGTEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKEL 103
RIHG + S ++G+E +++EK G+ IT+NRP NA + ++ +
Sbjct: 19 QRIHGHMMS---------SKAGSE---VLFEKVGKAGV--ITLNRPKALNALTLNMIRHI 64
Query: 104 IRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
DS ++I+ G G +AFC+GGD
Sbjct: 65 YPQLKKWDKDSETDIVIIKGAGEKAFCAGGD 95
>sp|P53526|ECH12_MYCLE Probable enoyl-CoA hydratase echA12 OS=Mycobacterium leprae (strain
TN) GN=echA12 PE=3 SV=1
Length = 294
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
+A IT+NRP R N+ +K L + D SV V++LTG G FCSG DQ
Sbjct: 31 VALITLNRPGRMNSMALDLMKSLKQVLKRITYDHSVRVVVLTGAG-RGFCSGADQKFTAP 89
Query: 141 ----DGYADYENFGRLNVL--DLQVQIRRLPKPVIAMVHLP 175
+G R L ++ + +RRL +PVIA ++ P
Sbjct: 90 VPQVEGLTQPVRALRAMELLEEVILALRRLHQPVIAAINGP 130
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA + EL +A +D +VG I+LT
Sbjct: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKTFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G G +AF +G D Q L +D Y+ L + ++ KPVIA V+
Sbjct: 89 G-GDKAFAAGADIKEMQNLSFQDCYSS-------KFLKHWDHLTQVKKPVIAAVN 135
>sp|O53163|ECH12_MYCTU Probable enoyl-CoA hydratase echA12 OS=Mycobacterium tuberculosis
GN=echA12 PE=3 SV=1
Length = 285
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 81 IAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTR 140
IA+IT+NRP+R N+ + L A D+SV V++LTG G F G D ++
Sbjct: 29 IAQITLNRPERMNSMAFDVMVPLKEALAQVSYDNSVRVVVLTGAG-RGFSPGADH--KSA 85
Query: 141 DGYADYENFGR-------LNVL-DLQVQIRRLPKPVIAMVHLP 175
EN R + +L D+ + +RRL +PVIA V+ P
Sbjct: 86 GVVPHVENLTRPTYALRSMELLDDVILMLRRLHQPVIAAVNGP 128
>sp|Q5R646|ECHM_PONAB Enoyl-CoA hydratase, mitochondrial OS=Pongo abelii GN=ECHS1 PE=2
SV=1
Length = 290
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 64 SGTEFTDIIYEK-AVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILT 122
SG F II EK + I +NRP NA + EL +A +D +VG I+LT
Sbjct: 29 SGANFEYIIAEKRGKNNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLT 88
Query: 123 GKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
G G +AF +G D + D + L D QI+ KPVIA V+
Sbjct: 89 G-GDKAFAAGADIKEMQNLSFQDCYSSKFLKHWDHLTQIK---KPVIAAVN 135
>sp|Q5XIC0|ECI2_RAT Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus
GN=Eci2 PE=1 SV=1
Length = 391
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 80 GIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRT 139
GI KIT NRP ++NA +++I A +A D +V + + TG G + + SG D T
Sbjct: 147 GITKITFNRPSKKNAITFQMYQDIILALKNASTDDTV-ITVFTGAG-DYYSSGNDLTNFT 204
Query: 140 --RDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVHLP 175
G + N G + + + PKP++A+V+ P
Sbjct: 205 SASGGMEEAANKGAIVLREFVNTFIDFPKPLVAVVNGP 242
>sp|Q58DM8|ECHM_BOVIN Enoyl-CoA hydratase, mitochondrial OS=Bos taurus GN=ECHS1 PE=2 SV=1
Length = 290
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 71 IIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFC 130
I +K + I +NRP NA + EL +A +D +VG I+LTG G + F
Sbjct: 37 ITAKKGRNSNVGLIQLNRPKALNALCNGLIVELNQALQAFEEDPAVGAIVLTG-GEKVFA 95
Query: 131 SGGD----QALRTRDGYADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
+G D Q+L ++ Y+ G L+ D Q+ R+ KPVIA V+
Sbjct: 96 AGADIKEMQSLTFQNCYSG----GFLSHWD---QLTRVKKPVIAAVN 135
>sp|O75521|ECI2_HUMAN Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2
PE=1 SV=4
Length = 394
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 63 ESGTEFTDIIYEKAV---GEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVI 119
E GT+ +E V +GI KI NRP ++NA E++RA A D S+ +
Sbjct: 129 EPGTDRKSTGFETLVVTSEDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-IT 187
Query: 120 ILTGKGTEAFCSGGDQALRTRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVHLP 175
+LTG G + + SG D T E + N + L+ + PKP+IA+V+ P
Sbjct: 188 VLTGNG-DYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPKPLIAVVNGP 245
>sp|Q5ZJ60|HIBCH_CHICK 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus
GN=HIBCH PE=2 SV=1
Length = 385
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 70 DIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAF 129
D++ +K G GI IT+NRP NA ++++ D +II+ G G +AF
Sbjct: 36 DVLLQKQGGAGI--ITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAF 93
Query: 130 CSGGD 134
C+GGD
Sbjct: 94 CAGGD 98
>sp|P41942|YKB4_CAEEL Uncharacterized protein B0272.4 OS=Caenorhabditis elegans
GN=B0272.4 PE=3 SV=1
Length = 255
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALRTRDGY 143
+T+NRP + NA +L FNDA DD + ++ TG + +C+G D +
Sbjct: 17 VTLNRPKKFNALTRQMFLDLCTVFNDAADDDDIAFVVFTGGKGKYYCAGSDFSPAELSTL 76
Query: 144 ADYENFGRLNVLDLQVQIRRLPKPVIAMVH 173
D + G +D+ + PKP+IA+V+
Sbjct: 77 TDIQEHGYKLFVDILIA---FPKPIIALVN 103
>sp|Q6NMB0|HIBC3_ARATH Probable 3-hydroxyisobutyryl-CoA hydrolase 3 OS=Arabidopsis
thaliana GN=At2g30660 PE=2 SV=1
Length = 378
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 84 ITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGD 134
+T+NRP + NA + + L++ F +D SV ++IL G+G AFC+GGD
Sbjct: 18 LTLNRPKQLNALCFNMISRLLQLFRAYEEDPSVKLVILKGQG-RAFCAGGD 67
>sp|Q55GS6|HIBCH_DICDI 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium
discoideum GN=hibch PE=3 SV=1
Length = 381
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 66 TEFTDIIYEKAVGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDS-SVGVIILTGK 124
T ++++EK G+ + K+ +NRP NA P+ VK L + + + GVI++ G
Sbjct: 20 TSTEEVLFEKK-GKCL-KVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGA 77
Query: 125 GTEAFCSGGD 134
G +AFC+GGD
Sbjct: 78 GEKAFCAGGD 87
>sp|P77467|PAAG_ECOLI 1,2-epoxyphenylacetyl-CoA isomerase OS=Escherichia coli (strain
K12) GN=paaG PE=1 SV=1
Length = 262
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 77 VGEGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQA 136
V +G+ +T+NRP+R N+F +L D ++ ++LTG G FC+G D
Sbjct: 9 VEKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAG-RGFCAGQDLN 67
Query: 137 LRTRDGYADYENFGRLNVLDLQVQIRR---LPKPVIA 170
R D + G +RR LPKPVI
Sbjct: 68 DRNVDPTGPAPDLGMSVERFYNPLVRRLAKLPKPVIC 104
>sp|Q9LCU3|CBAD2_ARTSP 4-chlorobenzoyl coenzyme A dehalogenase-2 OS=Arthrobacter sp.
GN=fcbB2 PE=1 SV=1
Length = 276
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 79 EGIAKITINRPDRRNAFRPHTVKELIRAFNDARDDSSVGVIILTGKGTEAFCSGGDQALR 138
+G+A I RP + NA + E + A D SVG I+LTG+G F +G D
Sbjct: 15 DGVATIRFTRPSKHNAASAQLLLETLEALYRLESDDSVGAIVLTGEGA-VFSAGFDLEEV 73
Query: 139 TRDGYADYENFGRLNVLDLQVQIR---RLPKPVIAMVHLP 175
++ ++ RL L I R+ KP +A ++ P
Sbjct: 74 PMGPASEIQSHFRLKALYYHAVIHMLARIEKPTLAAINGP 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,775,821
Number of Sequences: 539616
Number of extensions: 2805360
Number of successful extensions: 6320
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 6200
Number of HSP's gapped (non-prelim): 164
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)