BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030575
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZL8|FRS5_ARATH Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana GN=FRS5
PE=2 SV=1
Length = 788
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/102 (52%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGF-SPNSKGTNG 59
+EF+SE+AA+ FY YARR+GF R+ RRSR DG + R+ C K+GF + N K T
Sbjct: 77 LEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKD 136
Query: 60 PE-KKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 100
E K+PR R GCKA++ VKM+ SGKW+V+ F+KDHNH LV
Sbjct: 137 REIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELV 178
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 113 DKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVI 158
DKKI +L ELE + C AYR L + + +E+Q ++S K+Q I
Sbjct: 735 DKKINQLRNELELANRKCEAYRTNLLSVLKEMEDQKLQVSIKVQNI 780
>sp|Q3E7I5|FRS12_ARATH Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana GN=FRS12
PE=2 SV=1
Length = 788
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 57/99 (57%), Gaps = 14/99 (14%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
+EFD+ + AR+FY YA R GF VR Q RSRTDGT +RR C+K+GF NS
Sbjct: 47 LEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS------ 100
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
R GC A I V+ +GKWV+ + K+HNH L
Sbjct: 101 --------RTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 55/99 (55%), Gaps = 14/99 (14%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
+EF S + A +FY YA +GF VRI Q RS+ DG+ +RR C+++GF
Sbjct: 215 LEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQ--------- 265
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
PS R GC A + +K + SG W+V R KDHNH L
Sbjct: 266 ----HPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 299
>sp|Q9M8J3|FRS7_ARATH Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana GN=FRS7
PE=2 SV=1
Length = 764
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 56/99 (56%), Gaps = 14/99 (14%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
+EFD+ + AR +Y YA R GF VR Q RSRTDGT +RR C+K+GF NS
Sbjct: 32 LEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGFQLNS------ 85
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
R GC A I V+ +GKWV+ + K+HNH L
Sbjct: 86 --------RTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 56/99 (56%), Gaps = 14/99 (14%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
+EF+S + A +FY YA +GF VRI Q RS+ DG+ +RR C+K+GF
Sbjct: 194 LEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQ--------- 244
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
PS R GC A + +K + SG W+V R KDHNH L
Sbjct: 245 ----HPS-RMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL 278
>sp|Q3EBQ3|FRS2_ARATH Protein FAR1-RELATED SEQUENCE 2 OS=Arabidopsis thaliana GN=FRS2
PE=2 SV=1
Length = 807
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
M+F+S++AA FY YAR +GF + I RRS+ G + ++ C++ G +K
Sbjct: 42 MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFG----TKREKAT 97
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVGDKDKKIEELT 120
PR + GCKA + +K ++ KWV+ F+K+HNH + + Y +V K+K L
Sbjct: 98 AINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHE-ICPDDFYVSVRGKNKPAGALA 156
Query: 121 L 121
+
Sbjct: 157 I 157
>sp|Q6NQJ7|FRS4_ARATH Protein FAR1-RELATED SEQUENCE 4 OS=Arabidopsis thaliana GN=FRS4
PE=2 SV=2
Length = 732
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
MEF++ + A FY YA+ +GF + RRSR + + C + G SK +
Sbjct: 1 MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYG----SKQQSDD 56
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLVVTANGY 106
PR S + GCKA++ VK GKW V F+K+HNH L+ Y
Sbjct: 57 AINPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLLPEQAHY 102
>sp|Q9SWG3|FAR1_ARATH Protein FAR-RED IMPAIRED RESPONSE 1 OS=Arabidopsis thaliana GN=FAR1
PE=1 SV=1
Length = 827
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
++FD+ +AA FY YA+ MGF I RRS+ + + C++ G +P S+ +
Sbjct: 55 IDFDTHEAAYIFYQEYAKSMGFTTSIKNSRRSKKTKDFIDAKFACSRYGVTPESESSGS- 113
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 100
+ + CKA++ VK GKW++ F+KDHNH L+
Sbjct: 114 SSRRSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL 153
>sp|Q9LIE5|FHY3_ARATH Protein FAR-RED ELONGATED HYPOCOTYL 3 OS=Arabidopsis thaliana
GN=FHY3 PE=1 SV=1
Length = 839
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 12/112 (10%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFS-PNSKGTNG 59
MEF+S A FY Y+R MGF I RRS+T + + C++ G K N
Sbjct: 74 MEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDKSFNR 133
Query: 60 PEKKP-----------RPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 100
P + R A+ CKA++ VK GKWV+ F+++HNH L+
Sbjct: 134 PRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELL 185
>sp|Q5UBY2|FRS1_ARATH Protein FAR1-RELATED SEQUENCE 1 OS=Arabidopsis thaliana GN=FRS1
PE=1 SV=1
Length = 687
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 2 EFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSP-------NS 54
EF+S++ A +FY YA +GF I RRSR G + + C + G +
Sbjct: 26 EFESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGT 85
Query: 55 KGTNGPEKKPR-----PSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
G N P+ + R S++ CKA + VK + G+WVV +K+HNH +
Sbjct: 86 DGFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEI 135
>sp|Q9ZVC9|FRS3_ARATH Protein FAR1-RELATED SEQUENCE 3 OS=Arabidopsis thaliana GN=FRS3
PE=2 SV=2
Length = 851
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 16/100 (16%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
MEF+SE A+ FY Y+R++GF +++ RTDG+ R C+
Sbjct: 53 MEFNSEKEAKSFYDEYSRQLGFTSKLL----PRTDGSVSVREFVCSSS------------ 96
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLV 100
K+ + E C A + ++++ KWVVT+F+K+H H L
Sbjct: 97 SKRSKRRLSESCDAMVRIELQGHEKWVVTKFVKEHTHGLA 136
>sp|Q9S793|FRS8_ARATH Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana GN=FRS8
PE=2 SV=2
Length = 725
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
MEF+S D A FY YAR +GF +R+ R L CN QGF K
Sbjct: 99 MEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGF----KLLKDA 154
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
+ R R GC+A I +++ +W V + DHNH
Sbjct: 155 HSR-RKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNH 190
>sp|Q9SY66|FRS11_ARATH Protein FAR1-RELATED SEQUENCE 11 OS=Arabidopsis thaliana GN=FRS11
PE=2 SV=1
Length = 680
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 63/126 (50%), Gaps = 19/126 (15%)
Query: 3 FDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTT-----LARR-LGCNKQGFSPNSKG 56
F + D A +FY +A+R GF + RR RT+G L RR C++ G +P
Sbjct: 54 FLTHDTAYEFYSTFAKRCGFSI-----RRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKTL 108
Query: 57 TNGPEKKPRPSAREGCKATI-LVKMEKSG--KWVVTRFIKDHNHPL-----VVTANGYST 108
+ G ++ R S+R GC+A + + K+ + G +W VT F HNH L V Y +
Sbjct: 109 SEGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYRS 168
Query: 109 VGDKDK 114
+ D DK
Sbjct: 169 ISDADK 174
>sp|Q9SSQ4|FRS6_ARATH Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana GN=FRS6
PE=2 SV=1
Length = 703
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 1 MEFDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGP 60
MEF+S D A +Y YA +GF VR+ R L C+ QGF K N
Sbjct: 89 MEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSSQGF----KRINDV 144
Query: 61 EKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPL 99
+ R R GC A I ++ S +W V DHNH L
Sbjct: 145 -NRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNHLL 182
>sp|Q9LKR4|FRS10_ARATH Putative protein FAR1-RELATED SEQUENCE 10 OS=Arabidopsis thaliana
GN=FRS10 PE=2 SV=2
Length = 685
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 3 FDSEDAARKFYMGYARRMGFVVRIMQRRRSRTDGTTLARRLGCNKQGFSPNSKGTNGPEK 62
F ++D A ++Y +AR+ GF +R + S+ G R C + GF+ K N
Sbjct: 61 FTTDDEAFEYYSTFARKSGFSIRKARSTESQNLG-VYRRDFVCYRSGFNQPRKKANVEHP 119
Query: 63 KPRPSAREGCKATILVK---MEKSGKWVVTRFIKDHNHPLV 100
+ R S R GC + + ++ W V++F HNH L+
Sbjct: 120 RERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELL 160
>sp|Q9SZL7|FRS9_ARATH Protein FAR1-RELATED SEQUENCE 9 OS=Arabidopsis thaliana GN=FRS9
PE=2 SV=2
Length = 545
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 31/106 (29%)
Query: 51 SPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNHPLVVTANGYSTVG 110
+P ++ NG E P ARE AT NHP G
Sbjct: 463 TPGTRLPNG-EAYPSEEARETANAT--------------------NHP----------GG 491
Query: 111 DKDKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQ 156
+K++ I ELT ELER Q C YR L + + ++EEQ +LS K+Q
Sbjct: 492 EKERTILELTAELERTGQRCEVYRANLLSILRDMEEQKFQLSLKVQ 537
>sp|A0Q0Z2|PLSX_CLONN Phosphate acyltransferase OS=Clostridium novyi (strain NT) GN=plsX
PE=3 SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 36 GTTL--ARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIK 93
G TL R G ++ +P G NGP A CK + LV+ K G+ +
Sbjct: 110 GATLVVGRIKGVSRPALAPIMPGKNGPFMIIDCGANAECKPSNLVQFAKMGEIYFENILN 169
Query: 94 DHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAYREKLFNFMNNVE 145
N P V G +G +++K ELT E + ++ FNF+ NVE
Sbjct: 170 VKN-PTV----GLINIGSEEEKGNELTKEAHK------LLKDMDFNFVGNVE 210
>sp|Q25BW5|BGL1A_PHACH Beta-glucosidase 1A OS=Phanerochaete chrysosporium GN=BGL1A PE=1
SV=1
Length = 462
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 85 KWVVTRFIKDHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAYREKLFNFMNNV 144
+W++ K ++ P+ VT NG+ G+ D +E+ + +RQ A YR+ + V
Sbjct: 347 RWLLNYLWKAYDKPVYVTENGFPVKGENDLPVEQAVDDTDRQ----AYYRDYTEALLQAV 402
Query: 145 EEQTEELSSKI-QVIVDNIRKVES 167
E ++ ++DN E
Sbjct: 403 TEDGADVRGYFGWSLLDNFEWAEG 426
>sp|P37702|BGL38_ARATH Myrosinase 1 OS=Arabidopsis thaliana GN=TGG1 PE=1 SV=1
Length = 541
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 86 WVVTRFIKDHNHPLV-VTANGYSTVGDKDKKIEELTLELERQEQLCA 131
+V+ F + PL+ VT NG+ST GD+D E+ T + +R + LC+
Sbjct: 402 YVMDYFKTTYGDPLIYVTENGFSTPGDED--FEKATADYKRIDYLCS 446
>sp|Q18GQ9|RFCL_HALWD Replication factor C large subunit OS=Haloquadratum walsbyi (strain
DSM 16790) GN=rfcL PE=3 SV=1
Length = 516
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 76 ILVKMEKSGKWVVTRFIKDHNHPLVVTANGY 106
I + ++ GK VT +KD N P+V+ AN Y
Sbjct: 114 IHYQYDRGGKQAVTTLLKDANQPIVLIANEY 144
>sp|Q08460|KCMA1_MOUSE Calcium-activated potassium channel subunit alpha-1 OS=Mus musculus
GN=Kcnma1 PE=1 SV=2
Length = 1209
Score = 31.2 bits (69), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 43 LGCNKQGFSPNSKGTNGPEKKP------RPSAREGCKATILVKMEKSGKWVVTRFIKDHN 96
L N QGF+P + P+ P +PS G I+ ++ K GK + ++ N
Sbjct: 908 LQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELAKPGKLPLVSVNQEKN 967
Query: 97 ---HPLVVT 102
H L++T
Sbjct: 968 SGTHILMIT 976
>sp|Q62976|KCMA1_RAT Calcium-activated potassium channel subunit alpha-1 OS=Rattus
norvegicus GN=Kcnma1 PE=1 SV=3
Length = 1209
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 43 LGCNKQGFSPNSKGTNGPEKKP------RPSAREGCKATILVKMEKSGKWVVTRFIKDHN 96
L N QGF+P + P+ P +PS G I+ ++ K GK + ++ N
Sbjct: 909 LQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIPIITELAKPGKLPLVSVNQEKN 968
Query: 97 ---HPLVVT 102
H L++T
Sbjct: 969 SGTHILMIT 977
>sp|Q49YG2|SYY_STAS1 Tyrosine--tRNA ligase OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=tyrS
PE=3 SV=1
Length = 420
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 86 WVVTRFIKDHNH-PLVVTANGYSTVGDKDKKIEELTLELERQ 126
++ R ++H H PLV+ G +GD K EE TL+ E Q
Sbjct: 54 FLTLRRFQEHGHRPLVLIGGGTGMIGDPSGKSEERTLQTEAQ 95
>sp|Q8AYC2|MRTFA_XENLA Myocardin-related transcription factor A OS=Xenopus laevis GN=mrtfa
PE=2 SV=1
Length = 936
Score = 30.8 bits (68), Expect = 4.6, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 111 DKDKKIEELTLELERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVI--------VDNI 162
+KD++IEELT L+++++L R++L + T++ + I + VD+I
Sbjct: 507 EKDRQIEELTQRLKQKQELVERLRQQLEQEKRTPQHSTDDQQALILAVKQEPLPLTVDSI 566
Query: 163 RKVESEMLKSFL 174
K S ++K L
Sbjct: 567 NKKASSIVKQEL 578
>sp|Q5B3B1|NDC80_EMENI Probable kinetochore protein ndc80 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=ndc80 PE=3 SV=1
Length = 738
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 123 LERQEQLCAAYREKLFNFMNNVEEQTEELSSKIQVIVDNIRKVESEM 169
L++Q ++ + K +++ NV+ + E+ S+I + D IRK ESE+
Sbjct: 370 LDKQFRILEDDKRKFEDYIQNVQGKIEKYESRIAFLEDEIRKTESEL 416
>sp|Q2YC67|ILVD_NITMU Dihydroxy-acid dehydratase OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=ilvD PE=3 SV=1
Length = 557
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 94 DHNHPLVVTANGYSTVGDKDKKIEELTLELERQEQLCAA 132
D + P+V ANG+ST+ +K + EL L E+ + AA
Sbjct: 32 DFDKPIVGVANGFSTITPCNKGLNELALAAEQALKQAAA 70
>sp|B1II87|PLSX_CLOBK Phosphate acyltransferase OS=Clostridium botulinum (strain Okra /
Type B1) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|C1FSM7|PLSX_CLOBJ Phosphate acyltransferase OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|C3L0F4|PLSX_CLOB6 Phosphate acyltransferase OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|A7FW21|PLSX_CLOB1 Phosphate acyltransferase OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|A7GG45|PLSX_CLOBL Phosphate acyltransferase OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=plsX PE=3 SV=1
Length = 335
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIADAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
>sp|Q4L774|SYY_STAHJ Tyrosine--tRNA ligase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=tyrS PE=3 SV=1
Length = 420
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Query: 86 WVVTRFIKDHNH-PLVVTANGYSTVGDKDKKIEELTLELERQEQL----CAAYREKLFNF 140
++ R ++H H P+V+ G +GD K EE L+ E Q + +A KLF F
Sbjct: 54 FMTLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERILQTEDQVEANVEGISAQMHKLFEF 113
>sp|B1KWP6|PLSX_CLOBM Phosphate acyltransferase OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=plsX PE=3 SV=1
Length = 335
Score = 30.0 bits (66), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 38 TLARRLGCNKQGFSPNSKGTNGPEKKPRPSAREGCKATILVKMEKSGKWVVTRFIKDHNH 97
L R G N+ +P G P A CKA LV+ GK V +
Sbjct: 114 VLGRIKGINRVCLAPLLPGAKAPFMIVDAGANVDCKAEYLVQFAMMGK-VYFESVLGVKS 172
Query: 98 PLVVTANGYSTVGDKDKKIEELTLELERQEQLCAAY---REKLFNFMNNVE 145
P V G +G +++K ELT AAY ++ FNF+ N+E
Sbjct: 173 PTV----GLVNIGAEEEKGNELTK---------AAYKLLKDTDFNFIGNIE 210
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,717,668
Number of Sequences: 539616
Number of extensions: 2590418
Number of successful extensions: 11247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 11020
Number of HSP's gapped (non-prelim): 322
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)