Your job contains 1 sequence.
>030577
MCNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGR
YLLLRQRVEFPGDKAGRLEELALQSLDQNKITRDQTQPFRITARENQQNHRGSPVPMLDG
NADGDGKVDNKLIDLNARPNRGQASNNQGMDVLSGTNHDSAGVVPVGSFKREPEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030577
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2050130 - symbol:BBX18 "B-box domain protein 1... 374 8.4e-41 2
TAIR|locus:2198841 - symbol:STO "SALT TOLERANCE" species:... 159 1.0e-11 1
TAIR|locus:2120207 - symbol:BZS1 "BZS1" species:3702 "Ara... 144 5.6e-10 1
TAIR|locus:2005624 - symbol:BBX21 "B-box domain protein 2... 140 4.6e-09 1
TAIR|locus:2061330 - symbol:STH "salt tolerance homologue... 126 2.6e-07 1
TAIR|locus:2122759 - symbol:bbx23 "B-box domain protein 2... 112 6.9e-06 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 116 1.6e-05 2
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 117 1.9e-05 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 117 2.8e-05 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 111 0.00018 1
UNIPROTKB|Q9FRZ6 - symbol:Q9FRZ6 "Hd1" species:4530 "Oryz... 99 0.00060 2
>TAIR|locus:2050130 [details] [associations]
symbol:BBX18 "B-box domain protein 18" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010264 "myo-inositol hexakisphosphate biosynthetic process"
evidence=RCA] InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119
SMART:SM00336 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008270
EMBL:AC006841 GO:GO:0003700 GO:GO:0005622 HOGENOM:HOG000239240
EMBL:AY060570 EMBL:AY125573 IPI:IPI00525924 PIR:H84599
RefSeq:NP_565507.1 UniGene:At.27367 ProteinModelPortal:Q9SJU5
SMR:Q9SJU5 STRING:Q9SJU5 EnsemblPlants:AT2G21320.1 GeneID:816671
KEGG:ath:AT2G21320 TAIR:At2g21320 eggNOG:NOG329451
InParanoid:Q9SJU5 OMA:KCNKLAS PhylomeDB:Q9SJU5
ProtClustDB:CLSN2914972 ArrayExpress:Q9SJU5 Genevestigator:Q9SJU5
Uniprot:Q9SJU5
Length = 172
Score = 374 (136.7 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 66/83 (79%), Positives = 74/83 (89%)
Query: 2 CNKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRTHGRY 61
CNKLASRH+RVGLA+PS+ P CDICENAPAFFYCEIDGSSLCLQCDM VHVGGKRTH R+
Sbjct: 35 CNKLASRHLRVGLADPSNAPSCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRF 94
Query: 62 LLLRQRVEFPGDKAGRLEELALQ 84
LLLRQR+EFPGDK ++L L+
Sbjct: 95 LLLRQRIEFPGDKPNHADQLGLR 117
Score = 87 (35.7 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 23 CDICENAPAFFYCEIDGSSLCLQCDMTVH 51
CD CE+A A +C D ++LC CD VH
Sbjct: 5 CDACESAAAIVFCAADEAALCCSCDEKVH 33
Score = 76 (31.8 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 122 ADGDGKVDNKLIDLNARPNR----GQASNNQGMDVLSGTNHD 159
++G+G D+ +IDLN+ P R G + +G+DV + NH+
Sbjct: 129 SNGNGDHDHNMIDLNSNPQRVHEPGSHNQEEGIDVNNANNHE 170
>TAIR|locus:2198841 [details] [associations]
symbol:STO "SALT TOLERANCE" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009416 "response to light stimulus"
evidence=IEP] [GO:0009640 "photomorphogenesis" evidence=IGI]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0006096
"glycolysis" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009651
"response to salt stress" evidence=IGI;RCA] [GO:0009737 "response
to abscisic acid stimulus" evidence=RCA] [GO:0046686 "response to
cadmium ion" evidence=RCA] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0009651 GO:GO:0008270 GO:GO:0003700
GO:GO:0080167 GO:GO:0009640 EMBL:AC024174 HOGENOM:HOG000239240
ProtClustDB:CLSN2682276 EMBL:X95572 EMBL:AY079377 EMBL:AY045794
IPI:IPI00518701 PIR:E86195 RefSeq:NP_172094.1 UniGene:At.23289
UniGene:At.38035 UniGene:At.70752 ProteinModelPortal:Q96288
SMR:Q96288 IntAct:Q96288 MINT:MINT-189223 STRING:Q96288
EnsemblPlants:AT1G06040.1 GeneID:837113 KEGG:ath:AT1G06040
TAIR:At1g06040 eggNOG:NOG313367 InParanoid:Q96288 OMA:PRCDICQ
PhylomeDB:Q96288 Genevestigator:Q96288 Uniprot:Q96288
Length = 248
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 3 NKLASRHVRVGLANPSD-VPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HG 59
NKLAS+H R+ L + S PRCDIC+ AF +C D + LC CD ++HV R+ H
Sbjct: 36 NKLASKHQRLHLNSLSTKFPRCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQ 95
Query: 60 RYLLLRQRVEFPGDKAGRLEELALQSLDQNKITRDQTQPFRITARENQQNHRGSPVP 116
R+L +V + E N+ +Q P + T+++ QQ +P+P
Sbjct: 96 RFLATGIKVALTSTICSKEIEKNQPEPSNNQQKANQI-PAKSTSQQQQQPSSATPLP 151
Score = 106 (42.4 bits), Expect = 0.00042, P = 0.00042
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 22 RCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRVEFPG-DKAGRL 78
+CD+CE APA C D ++LC QCD+ +H K H R L +FP D
Sbjct: 4 QCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDICQEK 63
Query: 79 EELALQSLDQNKITRDQTQPFRITARENQQNHR 111
D+ + RD + + A NH+
Sbjct: 64 AAFIFCVEDRALLCRDCDESIHV-ANSRSANHQ 95
>TAIR|locus:2120207 [details] [associations]
symbol:BZS1 "BZS1" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0080167 "response to karrikin" evidence=IEP]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0080167
GO:GO:0010200 EMBL:AL035679 EMBL:AL161594 EMBL:AK118879
EMBL:BT028893 IPI:IPI00535007 PIR:T06067 RefSeq:NP_195618.2
UniGene:At.31120 ProteinModelPortal:Q0IGM7 SMR:Q0IGM7 PRIDE:Q0IGM7
EnsemblPlants:AT4G39070.1 GeneID:830062 KEGG:ath:AT4G39070
TAIR:At4g39070 eggNOG:NOG257043 HOGENOM:HOG000239240
InParanoid:Q0IGM7 OMA:DICGERR PhylomeDB:Q0IGM7
ProtClustDB:CLSN2915067 Genevestigator:Q0IGM7 GO:GO:0009741
Uniprot:Q0IGM7
Length = 242
Score = 144 (55.7 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 3 NKLASRHVRVGLANPS--DVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--H 58
NKLA +H+R L +P+ D P CDIC A +C+ D + LC +CD+ +H + T H
Sbjct: 36 NKLAGKHLRFSLTSPTFKDAPLCDICGERRALLFCQEDRAILCRECDIPIHQANEHTKKH 95
Query: 59 GRYLL 63
R+LL
Sbjct: 96 NRFLL 100
>TAIR|locus:2005624 [details] [associations]
symbol:BBX21 "B-box domain protein 21" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009641 "shade avoidance"
evidence=IGI;IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 GO:GO:0009641 HOGENOM:HOG000239240 EMBL:AC006434
EMBL:AB493536 IPI:IPI00536705 PIR:G96785 RefSeq:NP_177686.1
UniGene:At.34761 UniGene:At.69592 ProteinModelPortal:Q9LQZ7
SMR:Q9LQZ7 IntAct:Q9LQZ7 STRING:Q9LQZ7 EnsemblPlants:AT1G75540.1
GeneID:843890 KEGG:ath:AT1G75540 TAIR:At1g75540 eggNOG:NOG315170
InParanoid:Q9LQZ7 OMA:CDICQDK PhylomeDB:Q9LQZ7
ProtClustDB:CLSN2682536 Genevestigator:Q9LQZ7 GermOnline:AT1G75540
Uniprot:Q9LQZ7
Length = 331
Score = 140 (54.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 3 NKLASRHVRVGLANPSDV----PRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT- 57
NKLAS+H+R L PS P CDIC++ A +C+ D + LC CD ++H + T
Sbjct: 36 NKLASKHLRFSLLYPSSSNTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTK 95
Query: 58 -HGRYLL 63
H R+LL
Sbjct: 96 KHDRFLL 102
>TAIR|locus:2061330 [details] [associations]
symbol:STH "salt tolerance homologue" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0019904 "protein domain specific binding"
evidence=NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR000315 Pfam:PF00643
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0003700
EMBL:AC007169 HOGENOM:HOG000239240 UniGene:At.24192
UniGene:At.69838 EMBL:AF323666 EMBL:AF325077 EMBL:AF370311
EMBL:AY063097 IPI:IPI00545007 PIR:A84720 RefSeq:NP_565722.1
ProteinModelPortal:Q9SID1 SMR:Q9SID1 IntAct:Q9SID1 STRING:Q9SID1
EnsemblPlants:AT2G31380.1 GeneID:817696 KEGG:ath:AT2G31380
TAIR:At2g31380 eggNOG:NOG279894 InParanoid:Q9SID1 OMA:CAKCDVE
PhylomeDB:Q9SID1 ProtClustDB:CLSN2682276 Genevestigator:Q9SID1
GermOnline:AT2G31380 Uniprot:Q9SID1
Length = 238
Score = 126 (49.4 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 33/99 (33%), Positives = 47/99 (47%)
Query: 3 NKLASRHVRVGLANPSD-VPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HG 59
NKLAS+H R+ L + S P CDIC AF +C D + LC CD H R+ H
Sbjct: 36 NKLASKHQRLFLDSLSTKFPPCDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQ 95
Query: 60 RYLLLRQRVEFPGDKAGR-LEELALQSLDQNKITRDQTQ 97
R+L RV + +E+ +Q +++ TQ
Sbjct: 96 RFLATGIRVALSSTSCNQEVEKNHFDPSNQQSLSKPPTQ 134
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 22 RCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGKRT--HGRYLLLRQRVEFP 71
+CD+CE APA C D ++LC +CD+ VH K H R L +FP
Sbjct: 4 QCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFP 55
>TAIR|locus:2122759 [details] [associations]
symbol:bbx23 "B-box domain protein 23" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50119 SMART:SM00336
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008270 GO:GO:0003700
GO:GO:0005622 EMBL:AF096373 EMBL:AL161516 HOGENOM:HOG000239240
EMBL:AL049488 EMBL:AY122916 IPI:IPI00525768 PIR:T01973
RefSeq:NP_192762.1 UniGene:At.33641 ProteinModelPortal:O82617
SMR:O82617 EnsemblPlants:AT4G10240.1 GeneID:826615
KEGG:ath:AT4G10240 TAIR:At4g10240 eggNOG:NOG273282
InParanoid:O82617 OMA:TENSECS PhylomeDB:O82617
ProtClustDB:CLSN2915973 Genevestigator:O82617 Uniprot:O82617
Length = 162
Score = 112 (44.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 26/68 (38%), Positives = 33/68 (48%)
Query: 3 NKLASRHVRVGL-------ANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK 55
NKL RH RV L S P CDIC+ +F+C D + LC CD +H
Sbjct: 36 NKLFQRHHRVALQKDAASATTASGAPLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCN- 94
Query: 56 RTHGRYLL 63
+H R+LL
Sbjct: 95 -SHQRFLL 101
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 116 (45.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/64 (43%), Positives = 34/64 (53%)
Query: 3 NKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 60
N++ASRH RV + C+ CE APA F CE D +SLC CD VH R H R
Sbjct: 51 NRVASRHKRVRV--------CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
Query: 61 YLLL 64
+L
Sbjct: 103 VPIL 106
Score = 34 (17.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 117 MLDGNADGDGKVDNKLIDLNARPNRGQASNNQGMDVL 153
++D +G D K + PN + +NNQ +L
Sbjct: 135 VVDQEEGEEGDKDAKEVASWLFPNSDKNNNNQNNGLL 171
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 117 (46.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 3 NKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGG--KRTHGR 60
NKLASRH RV L C++CE APA C+ D ++LC+ CD +H R H R
Sbjct: 39 NKLASRHERVWL--------CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 117 (46.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 3 NKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 60
N+LASRH RV + C CE APA F+C+ D +SLC CD +H R H R
Sbjct: 43 NRLASRHERVRV--------CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
Query: 61 YLLL 64
+L
Sbjct: 95 VPIL 98
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
Identities = 26/64 (40%), Positives = 34/64 (53%)
Query: 3 NKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 60
N++ASRH RV + C CE+APA F C+ D +SLC CD +H R H R
Sbjct: 47 NRVASRHERVRV--------CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Query: 61 YLLL 64
+L
Sbjct: 99 VPIL 102
>UNIPROTKB|Q9FRZ6 [details] [associations]
symbol:Q9FRZ6 "Hd1" species:4530 "Oryza sativa" [GO:0003677
"DNA binding" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0010229 "inflorescence development" evidence=IGI]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] InterPro:IPR000315
PROSITE:PS50119 SMART:SM00336 GO:GO:0005634 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0010229 GO:GO:0048571
GO:GO:0048572 EMBL:AB041841 Gramene:Q9FRZ6 Genevestigator:Q9FRZ6
Uniprot:Q9FRZ6
Length = 259
Score = 99 (39.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 3 NKLASRHVRVGLANPSDVPRCDICENAPAFFYCEIDGSSLCLQCDMTVHVGGK--RTHGR 60
N++ASRH RV + C+ CE APA C D ++LC+ CD+ V+ R H R
Sbjct: 66 NRVASRHERVRV--------CEACERAPAALACRADAAALCVACDVQVYSANPLARRHQR 117
Score = 38 (18.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 123 DGDGKVDNKLIDLNARPNRGQASNNQGMDVLSGTNHDSA 161
D D +VD+ L+ N +NN D N +S+
Sbjct: 147 DKDEEVDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSS 185
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.409 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 175 0.00078 109 3 11 22 0.44 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 563 (60 KB)
Total size of DFA: 154 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.53u 0.14s 17.67t Elapsed: 00:00:00
Total cpu time: 17.53u 0.14s 17.67t Elapsed: 00:00:00
Start: Sat May 11 06:21:57 2013 End: Sat May 11 06:21:57 2013