Your job contains 1 sequence.
>030580
MMISNTTRILLPSPPPTCLATRQLDHNPLILRRDQAGFTSRTDFSRKLSHTHNEIFNSKK
IISSAQKRGISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL
MPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030580
(175 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|O62952 - symbol:rpl22 "50S ribosomal protein L2... 292 8.4e-26 1
UNIPROTKB|P0C444 - symbol:rpl22 "50S ribosomal protein L2... 263 1.0e-22 1
UNIPROTKB|P0C445 - symbol:rpl22 "50S ribosomal protein L2... 263 1.0e-22 1
UNIPROTKB|P0C446 - symbol:rpl22 "50S ribosomal protein L2... 263 1.0e-22 1
UNIPROTKB|Q6END4 - symbol:rpl22 "50S ribosomal protein L2... 263 1.0e-22 1
UNIPROTKB|P61181 - symbol:rplV "50S ribosomal protein L22... 195 1.6e-15 1
TIGR_CMR|CHY_2304 - symbol:CHY_2304 "ribosomal protein L2... 183 3.0e-14 1
TIGR_CMR|BA_0115 - symbol:BA_0115 "ribosomal protein L22"... 150 9.4e-11 1
TIGR_CMR|DET_0479 - symbol:DET_0479 "ribosomal protein L2... 145 3.2e-10 1
TIGR_CMR|SO_0236 - symbol:SO_0236 "ribosomal protein L22"... 144 4.1e-10 1
UNIPROTKB|P61175 - symbol:rplV "50S ribosomal subunit pro... 140 1.1e-09 1
TIGR_CMR|CBU_0243 - symbol:CBU_0243 "ribosomal protein L2... 140 1.1e-09 1
UNIPROTKB|Q9KNY9 - symbol:rplV "50S ribosomal protein L22... 139 1.4e-09 1
TIGR_CMR|VC_2591 - symbol:VC_2591 "ribosomal protein L22"... 139 1.4e-09 1
TAIR|locus:2018214 - symbol:AT1G52370 species:3702 "Arabi... 131 2.6e-08 1
TAIR|locus:2121318 - symbol:AT4G28360 species:3702 "Arabi... 129 4.5e-08 1
TIGR_CMR|CPS_0868 - symbol:CPS_0868 "ribosomal protein L2... 123 6.8e-08 1
TIGR_CMR|GSU_2852 - symbol:GSU_2852 "ribosomal protein L2... 116 3.8e-07 1
TIGR_CMR|SPO_0486 - symbol:SPO_0486 "ribosomal protein L2... 113 7.8e-07 1
TIGR_CMR|CJE_1870 - symbol:CJE_1870 "ribosomal protein L2... 109 2.1e-06 1
TIGR_CMR|APH_0285 - symbol:APH_0285 "ribosomal protein L2... 103 9.4e-06 1
TIGR_CMR|NSE_0271 - symbol:NSE_0271 "ribosomal protein L2... 100 2.2e-05 1
>UNIPROTKB|O62952 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:3329 "Picea abies" [GO:0043253 "chloroplast ribosome"
evidence=NAS] InterPro:IPR000048 InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 EMBL:U92462 PIR:T11808
ProteinModelPortal:O62952 SMR:O62952 GO:GO:0043253 Uniprot:O62952
Length = 142
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 57/91 (62%), Positives = 72/91 (79%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E+ A AR + MSAHK R+VI+QIRG SY + LMILELMPY ACYPI +LI+SAAAN HN
Sbjct: 12 EIRALARNIRMSAHKARKVINQIRGCSYGQALMILELMPYGACYPISQLIHSAAANANHN 71
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
MG N+A+L++++ EVNE KR +P+AQGR
Sbjct: 72 MGLNKANLLVSRVEVNEGAVFKRVQPRAQGR 102
>UNIPROTKB|P0C444 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:4530 "Oryza sativa" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 EMBL:AY522331 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 ProtClustDB:CHL00034 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 RefSeq:NP_001175475.1 RefSeq:NP_039425.1
UniGene:Os.81075 ProteinModelPortal:P0C444 SMR:P0C444 PRIDE:P0C444
GeneID:3131426 GeneID:9272040 KEGG:osa:3131426 KEGG:osa:9272040
Gramene:P0C444 HOGENOM:HOG000205046 KO:K02890 Genevestigator:P0C444
Uniprot:P0C444
Length = 149
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/116 (50%), Positives = 76/116 (65%)
Query: 59 KKIISSAQKRGISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMIL 118
KK S +K P +R K V + + +HMS KV+RV+D+IR R YEET+MIL
Sbjct: 14 KKKKSGLRKLARKVPTDR--LLKFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMIL 71
Query: 119 ELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR
Sbjct: 72 NLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGR 127
>UNIPROTKB|P0C445 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:39946 "Oryza sativa Indica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:AY522329 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 ProtClustDB:CHL00034 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 UniGene:Os.81075 RefSeq:YP_654243.1
ProteinModelPortal:P0C445 SMR:P0C445 PRIDE:P0C445 GeneID:4126901
Gramene:P0C445 Uniprot:P0C445
Length = 149
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/116 (50%), Positives = 76/116 (65%)
Query: 59 KKIISSAQKRGISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMIL 118
KK S +K P +R K V + + +HMS KV+RV+D+IR R YEET+MIL
Sbjct: 14 KKKKSGLRKLARKVPTDR--LLKFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMIL 71
Query: 119 ELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR
Sbjct: 72 NLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGR 127
>UNIPROTKB|P0C446 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0009536 "plastid"
evidence=IC] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507
GO:GO:0009536 GO:GO:0006412 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
ProtClustDB:CHL00034 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
RefSeq:NP_001175475.1 RefSeq:NP_039425.1 UniGene:Os.81075
GeneID:3131426 GeneID:9272040 KEGG:osa:3131426 KEGG:osa:9272040
KO:K02890 EMBL:AP005161 EMBL:AP003825 EMBL:AP005452 EMBL:AP005683
EMBL:AP005707 EMBL:M22826 PIR:JQ0266 ProteinModelPortal:P0C446
SMR:P0C446 STRING:P0C446 EnsemblPlants:LOC_Os04g16822.1
EnsemblPlants:LOC_Os08g15268.1 EnsemblPlants:LOC_Os09g24414.1
EnsemblPlants:LOC_Osp1g00740.1 Gramene:P0C446 eggNOG:COG0091
OMA:MCHITIV Uniprot:P0C446
Length = 149
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/116 (50%), Positives = 76/116 (65%)
Query: 59 KKIISSAQKRGISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMIL 118
KK S +K P +R K V + + +HMS KV+RV+D+IR R YEET+MIL
Sbjct: 14 KKKKSGLRKLARKVPTDR--LLKFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMIL 71
Query: 119 ELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR
Sbjct: 72 NLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGR 127
>UNIPROTKB|Q6END4 [details] [associations]
symbol:rpl22 "50S ribosomal protein L22, chloroplastic"
species:4536 "Oryza nivara" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0009507 GO:GO:0009536
GO:GO:0006412 GO:GO:0003735 GO:GO:0019843 EMBL:AP006728
GO:GO:0015934 RefSeq:YP_052789.1 ProteinModelPortal:Q6END4
SMR:Q6END4 GeneID:2885899 Gramene:Q6END4 ProtClustDB:CHL00034
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 Uniprot:Q6END4
Length = 149
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 58/116 (50%), Positives = 76/116 (65%)
Query: 59 KKIISSAQKRGISPPNNRNKTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMIL 118
KK S +K P +R K V + + +HMS KV+RV+D+IR R YEET+MIL
Sbjct: 14 KKKKSGLRKLARKVPTDR--LLKFERVFKAQKRIHMSVFKVQRVLDEIRWRYYEETVMIL 71
Query: 119 ELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
LMPYRA YPI KL+YSAAAN H F++A+L I KAEV+ +T + RP+A+GR
Sbjct: 72 NLMPYRASYPILKLVYSAAANATHYRDFDKANLFITKAEVSRSTIMNKFRPRARGR 127
>UNIPROTKB|P61181 [details] [associations]
symbol:rplV "50S ribosomal protein L22" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0040007 "growth" evidence=IMP] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0040007 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0006412 EMBL:BX842574 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:TVYADEG PIR:E70642 RefSeq:NP_215220.1 RefSeq:NP_335150.1
RefSeq:YP_006514050.1 ProteinModelPortal:P61181 SMR:P61181
PRIDE:P61181 EnsemblBacteria:EBMYCT00000003193
EnsemblBacteria:EBMYCT00000071963 GeneID:13318595 GeneID:888359
GeneID:926023 KEGG:mtc:MT0733 KEGG:mtu:Rv0706 KEGG:mtv:RVBD_0706
PATRIC:18123343 TubercuList:Rv0706 Uniprot:P61181
Length = 197
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 43/97 (44%), Positives = 59/97 (60%)
Query: 78 KTNKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAA 137
K + A AR++ +S K RRVID +RGRS + L IL P A P+ K+I SAA
Sbjct: 6 KATEYPSAVAKARFVRVSPRKARRVIDLVRGRSVSDALDILRWAPQAASGPVAKVIASAA 65
Query: 138 ANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
AN +N G + A+LV+A ++ +AKR RP+AQGR
Sbjct: 66 ANAQNNGGLDPATLVVATVYADQGPTAKRIRPRAQGR 102
>TIGR_CMR|CHY_2304 [details] [associations]
symbol:CHY_2304 "ribosomal protein L22" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR RefSeq:YP_361113.1
ProteinModelPortal:Q3A9S1 SMR:Q3A9S1 STRING:Q3A9S1 GeneID:3727499
KEGG:chy:CHY_2304 PATRIC:21277679
BioCyc:CHYD246194:GJCN-2303-MONOMER Uniprot:Q3A9S1
Length = 113
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 40/91 (43%), Positives = 57/91 (62%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E A A+Y+ +S K R+VID IRG+ EE L IL P +A Y I K++ SA AN +N
Sbjct: 2 EARAVAKYIRISPRKARQVIDLIRGKDVEEALAILRYTPKKASYFIEKVLRSAIANAENN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
++ +L +AKA V++ + KR P+AQGR
Sbjct: 62 HDMSKENLYVAKAYVDQGPTLKRYNPRAQGR 92
>TIGR_CMR|BA_0115 [details] [associations]
symbol:BA_0115 "ribosomal protein L22" species:198094
"Bacillus anthracis str. Ames" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006412
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10
HAMAP:MF_01331_B PANTHER:PTHR13501 SUPFAM:SSF54843
TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 RefSeq:NP_842683.1 RefSeq:YP_016720.1
RefSeq:YP_026401.1 ProteinModelPortal:Q81VS5 SMR:Q81VS5
DNASU:1086393 EnsemblBacteria:EBBACT00000012430
EnsemblBacteria:EBBACT00000015593 EnsemblBacteria:EBBACT00000023495
GeneID:1086393 GeneID:2818196 GeneID:2852427 KEGG:ban:BA_0115
KEGG:bar:GBAA_0115 KEGG:bat:BAS0115 OMA:ASRINKR
BioCyc:BANT260799:GJAJ-126-MONOMER
BioCyc:BANT261594:GJ7F-128-MONOMER Uniprot:Q81VS5
Length = 113
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 36/91 (39%), Positives = 51/91 (56%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
+ A AR + ++ KVR V+D IRG+ E + IL P A + K++ SA AN HN
Sbjct: 2 QAKAVARTVRIAPRKVRLVVDLIRGKQVGEAIAILNHTPKTASPVVEKVLKSAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
+ SLV+ K V+E + KR RP+A GR
Sbjct: 62 YEMDINSLVVEKVFVDEGPTLKRFRPRAMGR 92
>TIGR_CMR|DET_0479 [details] [associations]
symbol:DET_0479 "ribosomal protein L22" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:YP_181223.1 ProteinModelPortal:Q3Z976
STRING:Q3Z976 GeneID:3230150 KEGG:det:DET0479 PATRIC:21608027
BioCyc:DETH243164:GJNF-479-MONOMER Uniprot:Q3Z976
Length = 109
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
EV A + SA KVR +D +RG+ E + +L M + K+I SAAAN +N
Sbjct: 2 EVKAIVKDTGYSALKVRLCVDMVRGKKVSEAITMLRFMTSPTAKVVSKVIKSAAANAENN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
N A L I++ +EA KR RP+A+GR
Sbjct: 62 FQMNPADLKISQIYADEARMLKRMRPQARGR 92
>TIGR_CMR|SO_0236 [details] [associations]
symbol:SO_0236 "ribosomal protein L22" species:211586
"Shewanella oneidensis MR-1" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR RefSeq:NP_715876.1
ProteinModelPortal:Q8EK63 SMR:Q8EK63 PRIDE:Q8EK63 GeneID:1168119
KEGG:son:SO_0236 PATRIC:23520165 Uniprot:Q8EK63
Length = 110
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 36/91 (39%), Positives = 48/91 (52%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
EV A R+ SA K R V DQIRG + L IL P +A + K++ SA AN HN
Sbjct: 2 EVLAKHRFARTSAQKARLVADQIRGLPVAKALEILTFSPKKAAVLVKKVLDSAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + L + V+E + KR P+A+GR
Sbjct: 62 EGADIDELKVGAVFVDEGPTMKRIMPRAKGR 92
>UNIPROTKB|P61175 [details] [associations]
symbol:rplV "50S ribosomal subunit protein L22"
species:83333 "Escherichia coli K-12" [GO:0015934 "large ribosomal
subunit" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0046677 "response to antibiotic" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0019843 "rRNA
binding" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006412 GO:GO:0046677 EMBL:U18997
GO:GO:0003735 GO:GO:0019843 GO:GO:0015934 PDB:2VHM PDBsum:2VHM
PDB:2RDO PDBsum:2RDO Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 PDB:3J0T PDB:3J0W
PDB:3J0Y PDB:3J11 PDB:3J12 PDB:3J14 PDB:3SGF PDB:3UOS PDBsum:3J0T
PDBsum:3J0W PDBsum:3J0Y PDBsum:3J11 PDBsum:3J12 PDBsum:3J14
PDBsum:3SGF PDBsum:3UOS PDB:1P85 PDB:1P86 PDB:1VS6 PDB:1VS8
PDB:1VT2 PDB:2AW4 PDB:2AWB PDB:2GYA PDB:2GYC PDB:2I2T PDB:2I2V
PDB:2J28 PDB:2QAM PDB:2QAO PDB:2QBA PDB:2QBC PDB:2QBE PDB:2QBG
PDB:2QBI PDB:2QBK PDB:2QOV PDB:2QOX PDB:2QOZ PDB:2QP1 PDB:2VHN
PDB:2WWQ PDB:2Z4L PDB:2Z4N PDB:3DF2 PDB:3DF4 PDB:3E1B PDB:3E1D
PDB:3FIK PDB:3I1N PDB:3I1P PDB:3I1R PDB:3I1T PDB:3I20 PDB:3I22
PDB:3IZT PDB:3IZU PDB:3J01 PDB:3J19 PDB:3KCR PDB:3OAS PDB:3OAT
PDB:3OFC PDB:3OFD PDB:3OFQ PDB:3OFR PDB:3OFZ PDB:3OG0 PDB:3ORB
PDB:3R8S PDB:3R8T PDB:4GAR PDB:4GAU PDBsum:1P85 PDBsum:1P86
PDBsum:1VS6 PDBsum:1VS8 PDBsum:1VT2 PDBsum:2AW4 PDBsum:2AWB
PDBsum:2GYA PDBsum:2GYC PDBsum:2I2T PDBsum:2I2V PDBsum:2J28
PDBsum:2QAM PDBsum:2QAO PDBsum:2QBA PDBsum:2QBC PDBsum:2QBE
PDBsum:2QBG PDBsum:2QBI PDBsum:2QBK PDBsum:2QOV PDBsum:2QOX
PDBsum:2QOZ PDBsum:2QP1 PDBsum:2VHN PDBsum:2WWQ PDBsum:2Z4L
PDBsum:2Z4N PDBsum:3DF2 PDBsum:3DF4 PDBsum:3E1B PDBsum:3E1D
PDBsum:3FIK PDBsum:3I1N PDBsum:3I1P PDBsum:3I1R PDBsum:3I1T
PDBsum:3I20 PDBsum:3I22 PDBsum:3IZT PDBsum:3IZU PDBsum:3J01
PDBsum:3J19 PDBsum:3KCR PDBsum:3OAS PDBsum:3OAT PDBsum:3OFC
PDBsum:3OFD PDBsum:3OFQ PDBsum:3OFR PDBsum:3OFZ PDBsum:3OG0
PDBsum:3ORB PDBsum:3R8S PDBsum:3R8T PDBsum:4GAR PDBsum:4GAU
PDB:3BBX PDBsum:3BBX EMBL:X02613 ProtClustDB:PRK00565 OMA:ASRINKR
PIR:G23129 RefSeq:NP_417774.1 RefSeq:YP_492117.1
ProteinModelPortal:P61175 SMR:P61175 DIP:DIP-35983N IntAct:P61175
MINT:MINT-1253134 PaxDb:P61175 PRIDE:P61175
EnsemblBacteria:EBESCT00000000391 EnsemblBacteria:EBESCT00000016840
GeneID:12932293 GeneID:947813 KEGG:ecj:Y75_p3861 KEGG:eco:b3315
PATRIC:32122062 EchoBASE:EB0875 EcoGene:EG10882
BioCyc:EcoCyc:EG10882-MONOMER BioCyc:ECOL316407:JW3277-MONOMER
EvolutionaryTrace:P61175 Genevestigator:P61175 Uniprot:P61175
Length = 110
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/91 (39%), Positives = 48/91 (52%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E A R+ SA KVR V D IRG+ + L IL +A + K++ SA AN HN
Sbjct: 2 ETIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + L + K V+E S KR P+A+GR
Sbjct: 62 DGADIDDLKVTKIFVDEGPSMKRIMPRAKGR 92
>TIGR_CMR|CBU_0243 [details] [associations]
symbol:CBU_0243 "ribosomal protein L22" species:227377
"Coxiella burnetii RSA 493" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 OMA:ASRINKR EMBL:AF064946
RefSeq:NP_819287.1 ProteinModelPortal:O85387 SMR:O85387
PRIDE:O85387 GeneID:1208124 KEGG:cbu:CBU_0243 PATRIC:17929179
BioCyc:CBUR227377:GJ7S-249-MONOMER Uniprot:O85387
Length = 115
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 33/91 (36%), Positives = 51/91 (56%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
EV+A +Y +SA K R V DQ+RG E+ + +L +A + K++ SA AN HN
Sbjct: 2 EVAAKLKYARISAQKARLVADQVRGLGAEQAVNLLRFSNKKAAALMKKVLDSAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + L ++ V+E SA+R +A+GR
Sbjct: 62 EGADIDELKVSTVMVDEGPSARRFHARARGR 92
>UNIPROTKB|Q9KNY9 [details] [associations]
symbol:rplV "50S ribosomal protein L22" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003735
"structural constituent of ribosome" evidence=ISS] [GO:0006412
"translation" evidence=ISS] InterPro:IPR001063 InterPro:IPR005727
InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 OMA:ASRINKR PIR:A82059 RefSeq:NP_232219.1
ProteinModelPortal:Q9KNY9 SMR:Q9KNY9 DNASU:2615608 GeneID:2615608
KEGG:vch:VC2591 PATRIC:20084208 Uniprot:Q9KNY9
Length = 110
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E A + +S K R V DQIRG+S ++ L +L +A + K++ SA AN HN
Sbjct: 2 EAIAKHNFARISPQKARLVADQIRGKSVDQALELLTFSNKKAAELVKKVLESAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + L +AK V+E KR P+A+GR
Sbjct: 62 EGADIDDLRVAKIFVDEGPVMKRIMPRAKGR 92
>TIGR_CMR|VC_2591 [details] [associations]
symbol:VC_2591 "ribosomal protein L22" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 KO:K02890 eggNOG:COG0091
ProtClustDB:PRK00565 OMA:ASRINKR PIR:A82059 RefSeq:NP_232219.1
ProteinModelPortal:Q9KNY9 SMR:Q9KNY9 DNASU:2615608 GeneID:2615608
KEGG:vch:VC2591 PATRIC:20084208 Uniprot:Q9KNY9
Length = 110
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/91 (37%), Positives = 49/91 (53%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E A + +S K R V DQIRG+S ++ L +L +A + K++ SA AN HN
Sbjct: 2 EAIAKHNFARISPQKARLVADQIRGKSVDQALELLTFSNKKAAELVKKVLESAIANAEHN 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + L +AK V+E KR P+A+GR
Sbjct: 62 EGADIDDLRVAKIFVDEGPVMKRIMPRAKGR 92
>TAIR|locus:2018214 [details] [associations]
symbol:AT1G52370 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA] InterPro:IPR001063
InterPro:IPR005727 Pfam:PF00237 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 eggNOG:COG0091 EMBL:BT026039
EMBL:AK222231 EMBL:AK227361 EMBL:AK317366 IPI:IPI00543103
RefSeq:NP_001031174.1 RefSeq:NP_001117473.1 RefSeq:NP_564605.2
UniGene:At.43062 ProteinModelPortal:Q56W16 SMR:Q56W16 STRING:Q56W16
PaxDb:Q56W16 PRIDE:Q56W16 EnsemblPlants:AT1G52370.1
EnsemblPlants:AT1G52370.2 EnsemblPlants:AT1G52370.3 GeneID:841667
KEGG:ath:AT1G52370 TAIR:At1g52370 HOGENOM:HOG000238072
InParanoid:Q56W16 OMA:FVGKGFF PhylomeDB:Q56W16
ProtClustDB:CLSN2689658 Genevestigator:Q56W16 Uniprot:Q56W16
Length = 269
Score = 131 (51.2 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 40/147 (27%), Positives = 68/147 (46%)
Query: 28 PLILRRDQAGFTSRTDFSRKLSHTHNEIFNSKKIISSAQKRGISPPNNRNKTNKKAEVSA 87
PL Q G ++ SR+L + + +SS G + K+ +V A
Sbjct: 56 PLYYHLQQLGIST----SRQLQAGEEPVSSP---LSSPALLGSGKEEEQKIIPKRQKVQA 108
Query: 88 SARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFN 147
+ + S KV V +RG E+ LM L++ RA ++++I++A AN HN G +
Sbjct: 109 VLKSIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLD 168
Query: 148 EASLVIAKAEVNEATSAKRPRPKAQGR 174
L++A+A V + K+ A+GR
Sbjct: 169 PDRLLVAEAFVGKGLFGKKVAYHAKGR 195
>TAIR|locus:2121318 [details] [associations]
symbol:AT4G28360 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA;ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0015934 "large
ribosomal subunit" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237
GO:GO:0005739 EMBL:CP002687 GO:GO:0006412 GO:GO:0003735
GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HSSP:P48286 HOGENOM:HOG000238072
ProtClustDB:CLSN2689658 EMBL:AY085803 EMBL:BT025797 EMBL:AK227856
IPI:IPI00540979 RefSeq:NP_567805.1 UniGene:At.32022
ProteinModelPortal:Q8LDU0 SMR:Q8LDU0 STRING:Q8LDU0 PRIDE:Q8LDU0
EnsemblPlants:AT4G28360.1 GeneID:828951 KEGG:ath:AT4G28360
TAIR:At4g28360 InParanoid:Q8LDU0 PhylomeDB:Q8LDU0
Genevestigator:Q8LDU0 Uniprot:Q8LDU0
Length = 271
Score = 129 (50.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 39/147 (26%), Positives = 69/147 (46%)
Query: 28 PLILRRDQAGFTSRTDFSRKLSHTHNEIFNSKKIISSAQKRGISPPNNRNKTNKKAEVSA 87
PL Q G ++ SR+L + + + +SS G + K+ +V A
Sbjct: 57 PLYHHLQQLGIST----SRQLQASEEPVSSP---LSSPALLGSGKEEEQKIIPKRQKVQA 109
Query: 88 SARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFN 147
+ + S KV V +RG E+ L+ L++ RA ++++I++A AN HN G +
Sbjct: 110 VLKSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLD 169
Query: 148 EASLVIAKAEVNEATSAKRPRPKAQGR 174
L++A+A V + K+ A+GR
Sbjct: 170 PDRLLVAEAFVGKGLFGKKVAYHAKGR 196
>TIGR_CMR|CPS_0868 [details] [associations]
symbol:CPS_0868 "ribosomal protein L22" species:167879
"Colwellia psychrerythraea 34H" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 OMA:ASRINKR RefSeq:YP_267617.1
ProteinModelPortal:Q487Z8 SMR:Q487Z8 STRING:Q487Z8 GeneID:3521574
KEGG:cps:CPS_0868 PATRIC:21465029
BioCyc:CPSY167879:GI48-954-MONOMER Uniprot:Q487Z8
Length = 110
Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 90 RYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEA 149
++ SA K R V DQIRG + E+ L IL +A + K++ SA AN HN G +
Sbjct: 8 KFARGSAQKARLVADQIRGVNVEKALEILTFSNKKAAELVKKVLNSAIANAEHNEGADID 67
Query: 150 SLVIAKAEVNEATSAKRPRPKAQGR 174
L + +++ + KR P+A+GR
Sbjct: 68 ELFVKTILIDDGPTMKRIMPRAKGR 92
>TIGR_CMR|GSU_2852 [details] [associations]
symbol:GSU_2852 "ribosomal protein L22" species:243231
"Geobacter sulfurreducens PCA" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR001063
InterPro:IPR005727 InterPro:IPR018260 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:NP_953895.1 ProteinModelPortal:Q748Z3 SMR:Q748Z3
GeneID:2688710 KEGG:gsu:GSU2852 PATRIC:22028551
BioCyc:GSUL243231:GH27-2826-MONOMER Uniprot:Q748Z3
Length = 111
Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 28/91 (30%), Positives = 42/91 (46%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E SA + +S K R V+D +RG+ ++ L IL P + + KL+ SA AN
Sbjct: 2 EASAKLTFARLSPRKTRLVVDMVRGKGIQDALTILRFSPQASAKLVSKLLRSAVANAEQK 61
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
+ L + V+ KR P+A GR
Sbjct: 62 GASDVDRLYVKSISVDGGPVLKRFVPRAMGR 92
>TIGR_CMR|SPO_0486 [details] [associations]
symbol:SPO_0486 "ribosomal protein L22" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003735 "structural constituent of
ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 ProtClustDB:PRK00565
OMA:ASRINKR RefSeq:YP_165748.1 ProteinModelPortal:Q5LW57
GeneID:3195009 KEGG:sil:SPO0486 PATRIC:23374233 Uniprot:Q5LW57
Length = 126
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 30/91 (32%), Positives = 43/91 (47%)
Query: 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHN 143
E A R L S K+ V IRG+ + L L R + K + SA AN +N
Sbjct: 14 EAMAKLRMLRTSPQKLNLVAAMIRGKKVGQALTDLTFSNKRIAQDVKKCLQSAIANAENN 73
Query: 144 MGFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
+ L++A+A V + KR RP+A+GR
Sbjct: 74 HNLDVDELIVAEAWVGKNLVMKRGRPRARGR 104
>TIGR_CMR|CJE_1870 [details] [associations]
symbol:CJE_1870 "ribosomal protein L22" species:195099
"Campylobacter jejuni RM1221" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0009292 "genetic transfer"
evidence=ISS] [GO:0042254 "ribosome biogenesis" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0003735 GO:GO:0019843 GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
eggNOG:COG0091 ProtClustDB:PRK00565 RefSeq:YP_179840.1
ProteinModelPortal:Q5HS95 STRING:Q5HS95 GeneID:3232497
KEGG:cjr:CJE1870 PATRIC:20045572 OMA:TVYADEG
BioCyc:CJEJ195099:GJC0-1909-MONOMER Uniprot:Q5HS95
Length = 141
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 87 ASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGF 146
A +++ +S K R + ++RG + E + L+ MP + I I SA ANG GF
Sbjct: 4 ALIKFIRLSPTKARLIAREVRGMNAELAMASLKFMPNKGAKYIANAISSAVANG----GF 59
Query: 147 NEASLVIAKAEVNEATSAKRPRPKAQG 173
+++ V+ A KR RP+A+G
Sbjct: 60 EANEVIVKSCRVDAAAVLKRFRPRARG 86
>TIGR_CMR|APH_0285 [details] [associations]
symbol:APH_0285 "ribosomal protein L22" species:212042
"Anaplasma phagocytophilum HZ" [GO:0003735 "structural constituent
of ribosome" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
[GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 Pfam:PF00237 PROSITE:PS00464
GO:GO:0006412 GO:GO:0003735 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0019843 GO:GO:0015934 Gene3D:3.90.470.10 HAMAP:MF_01331_B
PANTHER:PTHR13501 SUPFAM:SSF54843 TIGRFAMs:TIGR01044
HOGENOM:HOG000205046 KO:K02890 eggNOG:COG0091 RefSeq:YP_504897.1
ProteinModelPortal:Q2GL54 STRING:Q2GL54 GeneID:3930326
KEGG:aph:APH_0285 PATRIC:20949144 OMA:FVKEIRV ProtClustDB:PRK00565
BioCyc:APHA212042:GHPM-315-MONOMER Uniprot:Q2GL54
Length = 112
Score = 103 (41.3 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 27/90 (30%), Positives = 46/90 (51%)
Query: 85 VSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNM 144
++A L + K+ V D IRG+ M L+ +A I K++ SA AN N
Sbjct: 5 IAAKGLGLRSTPAKLNLVADLIRGKDVAVAAMYLKFCKKKAALLIDKVLKSAIANARANY 64
Query: 145 GFNEASLVIAKAEVNEATSAKRPRPKAQGR 174
G + +L + + V +A + +R +P+A+GR
Sbjct: 65 GVDADNLYVKEVLVGKAFTLRRVQPRARGR 94
>TIGR_CMR|NSE_0271 [details] [associations]
symbol:NSE_0271 "ribosomal protein L22" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003735 "structural
constituent of ribosome" evidence=ISS] [GO:0006412 "translation"
evidence=ISS] [GO:0015934 "large ribosomal subunit" evidence=ISS]
InterPro:IPR001063 InterPro:IPR005727 InterPro:IPR018260
Pfam:PF00237 PROSITE:PS00464 GO:GO:0006412 GO:GO:0003735
GO:GO:0019843 EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0015934
Gene3D:3.90.470.10 HAMAP:MF_01331_B PANTHER:PTHR13501
SUPFAM:SSF54843 TIGRFAMs:TIGR01044 HOGENOM:HOG000205046 KO:K02890
OMA:FVKEIRV ProtClustDB:PRK00565 RefSeq:YP_506162.1
ProteinModelPortal:Q2GED4 STRING:Q2GED4 GeneID:3931467
KEGG:nse:NSE_0271 PATRIC:22680633 eggNOG:NOG120735
BioCyc:NSEN222891:GHFU-298-MONOMER Uniprot:Q2GED4
Length = 113
Score = 100 (40.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 89 ARYLHM--SAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGF 146
A Y +M S KV V D IRG+ + L + P+ K++ S+ AN +N G
Sbjct: 3 AEYKNMKSSVQKVNLVADMIRGKGVDVARSQLLFLKKALAKPLSKVLMSSVANAQNNFGV 62
Query: 147 NEASLVIAKAEVNEATSAKRPRPKAQGR 174
+ +L + + V + S KR +A+GR
Sbjct: 63 DPDNLYVKEVFVGKGMSLKRFAARARGR 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.130 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 175 175 0.00078 109 3 11 22 0.40 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 554 (59 KB)
Total size of DFA: 132 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.98u 0.10s 17.08t Elapsed: 00:00:01
Total cpu time: 16.98u 0.10s 17.08t Elapsed: 00:00:01
Start: Sat May 11 06:26:30 2013 End: Sat May 11 06:26:31 2013