Query 030586
Match_columns 175
No_of_seqs 111 out of 421
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 02:09:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3f_A Glycolipid transfer-lik 100.0 9.1E-51 3.1E-55 333.7 16.4 160 3-171 5-166 (224)
2 3kv0_A HET-C2; GLTP, glycolipi 100.0 6.8E-52 2.3E-56 337.3 9.4 163 4-172 11-178 (209)
3 3rzn_A GLTP, glycolipid transf 100.0 2.7E-49 9.4E-54 322.0 15.1 146 26-171 13-169 (209)
4 2jtt_C Calcyclin-binding prote 55.6 15 0.00052 20.9 3.4 27 111-137 8-34 (35)
5 4egw_A Magnesium transport pro 50.9 91 0.0031 24.7 9.1 80 45-137 160-246 (280)
6 2bbh_A Divalent cation transpo 45.7 94 0.0032 24.2 8.0 80 45-137 175-261 (269)
7 2hn1_A CORA, magnesium and cob 41.7 1E+02 0.0036 24.0 7.7 81 44-138 175-262 (266)
8 3ubw_A 14-3-3E, 14-3-3 protein 23.4 3E+02 0.01 22.3 7.9 94 35-140 119-232 (261)
9 2kdr_X NS4B, P27, non-structur 22.2 15 0.0005 20.0 -0.4 10 136-145 18-27 (28)
10 1k9u_A Polcalcin PHL P 7; poll 22.0 84 0.0029 18.8 3.2 29 12-43 4-32 (78)
11 1z21_A YOP proteins translocat 20.9 93 0.0032 22.0 3.4 47 40-87 59-105 (112)
No 1
>2i3f_A Glycolipid transfer-like protein; GLTP superfamily, GLTP-like, protein structure initiative, PSI; 1.38A {Galdieria sulphuraria} PDB: 2q52_A
Probab=100.00 E-value=9.1e-51 Score=333.67 Aligned_cols=160 Identities=23% Similarity=0.357 Sum_probs=144.1
Q ss_pred CCCCCCchHHHHHHHHHHHhhhccCCCCCChHHHHHHHhHHHHHHHhhchhhHHHHHhHHHhHHHHHH-cch-hchhHHH
Q 030586 3 GTDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGIAFKFAEMDYVAKVDDLAE-ASK-SILTLQS 80 (175)
Q Consensus 3 ~~~~~~~l~~~~~~f~~~~~~~~~~~~~i~~~~fl~a~~~l~~~~d~lG~vf~~v~~Dv~~kI~~l~~-~~~-~~~tl~~ 80 (175)
..++.|+|++|..+|+++.. .++++|+|.+||+||++|++|||.||++|+||++||.+||++|+. +|. +|.||++
T Consensus 5 ~~~~~f~l~~v~~~F~~~~~---~~~~~I~t~~FL~a~~~l~~~fd~LG~~F~~v~~Dv~gnI~kL~~~~p~~~~~TL~~ 81 (224)
T 2i3f_A 5 KNEEKEDFGIIVILWKQVTV---KEDGKVPLEPFLTAAKEVLRVVDAFGSGFRIVKNDIAGNIKKLYRANQTVHAETLQE 81 (224)
T ss_dssp ------CTTHHHHHHHTSCC---CTTCCCBHHHHHHHHHHTHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTTCCSBHHH
T ss_pred hcccCCCHHHHHHHHHHhhc---cCCCCccHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhhCccchhhhHHH
Confidence 34677999999999999741 236899999999999999999999999999999999999999965 477 9999999
Q ss_pred HHHHHHhcCccccCCcchhHHHHHHhHHHHHHHHHHHHHhcCCCCchhHHHHHHHhhhcccchhHHHHHHHHHhhhCCCH
Q 030586 81 VIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTR 160 (175)
Q Consensus 81 mv~~E~~~~~~~~~~s~~~~LLwL~RaL~Fi~~~l~~l~~~~~~~l~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R 160 (175)
||.+|+ + +++||+++||||||||+|++.||+++..+++ +++++|++||++||+|||||+||++|++||+++|+|
T Consensus 82 mv~~E~-~----k~~S~tr~LLwL~RaL~Fi~~~l~~l~~~~~-~l~~~~~~AY~~tL~~yHgwivr~af~~Am~a~P~R 155 (224)
T 2i3f_A 82 LIIAEN-S----PDGLATVALLWLKRAFQFIASFLRRLVVTDK-SLEQCVTEAYNCTLRPCHSAVIQKVFWGGVKLAPSR 155 (224)
T ss_dssp HHHHHC-S----TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCS-CHHHHHHHHHHTTTGGGSCHHHHHHHHHHHTTCCCH
T ss_pred HHHHHH-h----cCCchhHHHHHHHHHHHHHHHHHHHHhcCCc-hHHHHHHHHHHHHhhcCCchHHHHHHHHHHHhCCCH
Confidence 999998 3 4679999999999999999999999999887 999999999999999999999999999999999999
Q ss_pred HHHHHHhccCC
Q 030586 161 AQLLRKLNEDG 171 (175)
Q Consensus 161 ~~fl~~l~~~~ 171 (175)
++|+++|++++
T Consensus 156 ~~fl~~L~~~~ 166 (224)
T 2i3f_A 156 ERFYRKLHPDL 166 (224)
T ss_dssp HHHHHHHCSSH
T ss_pred HHHHHHHCCCH
Confidence 99999999763
No 2
>3kv0_A HET-C2; GLTP, glycolipid transfer protein, transport protein; HET: MLY; 1.90A {Podospora anserina}
Probab=100.00 E-value=6.8e-52 Score=337.28 Aligned_cols=163 Identities=21% Similarity=0.370 Sum_probs=145.6
Q ss_pred CCCCCchHHHHHHHHHHHhhhccCCCCCChHHHHHHHhHHHHHHHhhch-hhHHHHHhHHHhHHHHHH----cchhchhH
Q 030586 4 TDNDKPLTKISESFKELAATVNSQAADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDYVAKVDDLAE----ASKSILTL 78 (175)
Q Consensus 4 ~~~~~~l~~~~~~f~~~~~~~~~~~~~i~~~~fl~a~~~l~~~~d~lG~-vf~~v~~Dv~~kI~~l~~----~~~~~~tl 78 (175)
|+++.+++.+...|.+|... .+++++|+|.+||+||++|++|||+||+ +|+||++||.+||++|++ +|++|.||
T Consensus 11 p~~~tff~~~~~~F~~~~~~-~~~~~~I~t~~fL~a~~~l~~~fd~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL 89 (209)
T 3kv0_A 11 PAGATFLETFXXSFVDVPID-AEXGNAISTAEFLEAAESLTTMFDVLGSIAFSPVXTDMLGNVEXIRXRMLAAPLESQNI 89 (209)
T ss_dssp ----CGGGGCSSCGGGCCEE-GGGTSEEBHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHSGGGCSBH
T ss_pred CCCCccHHHHHhhHHhCCCc-cccCCCccHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhHHHHHHHhhcCchhhchH
Confidence 56778899999999997310 0138899999999999999999999998 999999999999999875 58999999
Q ss_pred HHHHHHHHhcCccccCCcchhHHHHHHhHHHHHHHHHHHHHhcCCCCchhHHHHHHHhhhcccchhHHHHHHHHHhhhCC
Q 030586 79 QSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALP 158 (175)
Q Consensus 79 ~~mv~~E~~~~~~~~~~s~~~~LLwL~RaL~Fi~~~l~~l~~~~~~~l~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P 158 (175)
++||++|++. +++||+++||||||||+|++.||+++. .++++++++|++||++||+|||||+||++|++||+++|
T Consensus 90 ~~mv~~E~~~----~~~S~tr~LLwL~RaL~fi~~~l~~l~-~~~~~l~~~~~~AY~~tL~~yHgw~vr~af~~A~~a~P 164 (209)
T 3kv0_A 90 QDLVRNELXT----XSHTATEGLLWLVRGLEFTCIALSXNI-GSTEELADSFRGSYRVTLXPHHSFLVXPIFSAAMSACP 164 (209)
T ss_dssp HHHHHHHTCC-----CCHHHHHHHHHHHHHHHHHHHHHHHH-TSCCCHHHHHHHHHHHTTGGGSCTTTHHHHHHHHHTCC
T ss_pred HHHHHHHHHh----cccchHHHHHHHHHHHHHHHHHHHHHc-CCCCcHHHHHHHHHHHHHhcccchHHHHHHHHHHHhCC
Confidence 9999999877 367999999999999999999999999 77889999999999999999999999999999999999
Q ss_pred CHHHHHHHhccCCC
Q 030586 159 TRAQLLRKLNEDGY 172 (175)
Q Consensus 159 ~R~~fl~~l~~~~~ 172 (175)
+|++|+++||++++
T Consensus 165 ~R~~fl~~l~~~~~ 178 (209)
T 3kv0_A 165 YRXDFYAXLGDDEQ 178 (209)
T ss_dssp CHHHHHHHHCSCHH
T ss_pred cHHHHHHHhCCCHH
Confidence 99999999987643
No 3
>3rzn_A GLTP, glycolipid transfer protein; GLTP-fold, lipid transport; HET: CIS; 1.10A {Homo sapiens} PDB: 1sx6_A* 2euk_A* 2eum_A* 2evd_A* 2evl_A* 2evs_A* 1swx_A 3rwv_A* 3s0k_A* 3s0i_A* 2evt_A* 1wbe_A* 3ric_A* 1tfj_A* 2bv7_A*
Probab=100.00 E-value=2.7e-49 Score=321.99 Aligned_cols=146 Identities=26% Similarity=0.480 Sum_probs=134.5
Q ss_pred cCCCCCChHHHHHHHhHHHHHHHhhch-hhHHHHHhHHHhHHHHHH----cchhchhHHHHHHHHHhcCccc-cCCcchh
Q 030586 26 SQAADVELAAFSRACSYVSPLFGCLGI-AFKFAEMDYVAKVDDLAE----ASKSILTLQSVIDRDIEGNCVR-KAGSHTR 99 (175)
Q Consensus 26 ~~~~~i~~~~fl~a~~~l~~~~d~lG~-vf~~v~~Dv~~kI~~l~~----~~~~~~tl~~mv~~E~~~~~~~-~~~s~~~ 99 (175)
+++++|+|.+||+||++|++|||+||+ +|+||++||.+||++|++ +|++|.||++||++|++.|+.. .+.||++
T Consensus 13 ~~~~~i~t~~fL~a~~~l~~~~d~LG~~~F~~v~~D~~~nI~kl~~~~~~~~~~~~tL~~mv~~E~~~~~~~~~~~s~tr 92 (209)
T 3rzn_A 13 PADKQIETGPFLEAVSHLPPFFDCLGSPVFTPIKADISGNITKIKAVYDTNPAKFRTLQNILEVEKEMYGAEWPKVGATL 92 (209)
T ss_dssp CTTCCCBHHHHHHHHTTSGGGGGGSSCGGGHHHHHHHHHHHHHHHHHHHHCTTTTSBHHHHHHHHHHHHGGGTTSSHHHH
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHhcCchhhccHHHHHHHHHHcCCcccCCchHHH
Confidence 468899999999999999999999999 999999999999999875 5899999999999999998763 3679999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhcCCC-----CchhHHHHHHHhhhcccchhHHHHHHHHHhhhCCCHHHHHHHhccCC
Q 030586 100 NLLRVKRGLDMVRVLFEQILAAEGN-----SLKDPASKAYTQVFAPHHGWAIRKAVAAGMYALPTRAQLLRKLNEDG 171 (175)
Q Consensus 100 ~LLwL~RaL~Fi~~~l~~l~~~~~~-----~l~~~~~~AY~~tL~~yH~w~vr~~~~~a~~~~P~R~~fl~~l~~~~ 171 (175)
+||||||||+|++.||+++.+++++ +++++|++||++||+|||||+||++|++||+++|+|++|++++++++
T Consensus 93 ~LLwL~R~L~fi~~~l~~l~~~~~~~~~~~~l~~~~~~AY~~tL~~~H~w~vr~a~~~A~~a~P~R~~fl~~l~~g~ 169 (209)
T 3rzn_A 93 ALMWLKRGLRFIQVFLQSICDGERDENHPNLIRVNATKAYEMALKKYHGWIVQKIFQAALYAAPYKSDFLKALSKGQ 169 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCTTSTTCCHHHHHHHHHHHTGGGSCHHHHHHHHHHGGGCCCHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccchhHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHhCCCHHHHHHHHhcCC
Confidence 9999999999999999999886532 38999999999999999999999999999999999999999997543
No 4
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=55.62 E-value=15 Score=20.92 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=22.7
Q ss_pred HHHHHHHHHhcCCCCchhHHHHHHHhh
Q 030586 111 VRVLFEQILAAEGNSLKDPASKAYTQV 137 (175)
Q Consensus 111 i~~~l~~l~~~~~~~l~~~~~~AY~~t 137 (175)
+-.||+.|..+.+++.+.+..+||.++
T Consensus 8 l~~~fk~iY~~gddd~kram~KS~~eS 34 (35)
T 2jtt_C 8 LMNVLKKIYEDGDDDMKRTINKAWVES 34 (35)
T ss_dssp HHHHHHHHHTTCCSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHhhc
Confidence 347899999988899999999998764
No 5
>4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii}
Probab=50.87 E-value=91 Score=24.67 Aligned_cols=80 Identities=8% Similarity=0.123 Sum_probs=51.1
Q ss_pred HHHHhhchhhHHHHHhHHHhHHHHHHc---chhchhHHHHHHHHHhcCccccCCcchhHHHHHHhHHHHHHHHHHHHHhc
Q 030586 45 PLFGCLGIAFKFAEMDYVAKVDDLAEA---SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAA 121 (175)
Q Consensus 45 ~~~d~lG~vf~~v~~Dv~~kI~~l~~~---~~~~~tl~~mv~~E~~~~~~~~~~s~~~~LLwL~RaL~Fi~~~l~~l~~~ 121 (175)
.++|.+=.-+.++-..+..+|+.+++. +..-..++++..-. +.|+.|+|++.=....+..|...
T Consensus 160 ~lld~ivd~y~~~l~~i~~~id~lE~~l~~~~~~~~l~~i~~lr-------------r~l~~lrr~l~p~~~vl~~L~~~ 226 (280)
T 4egw_A 160 HILNEITRSYSRILMNLEDELEELEDKLLAGYDREVMEKILGLR-------------KTLVYFHKSLIANRDVLVLLKRK 226 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHH-------------HHHHHHHHHHhhHHHHHHHHHhc
Confidence 355555555667777777788887763 22233455554443 67888999999999999998865
Q ss_pred CC----CCchhHHHHHHHhh
Q 030586 122 EG----NSLKDPASKAYTQV 137 (175)
Q Consensus 122 ~~----~~l~~~~~~AY~~t 137 (175)
.. +....-.++.|+..
T Consensus 227 ~~~~~~~~~~~~l~Dv~dh~ 246 (280)
T 4egw_A 227 YLPITTKEDRENFEDLYYDT 246 (280)
T ss_dssp CCSSCCHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHH
Confidence 43 23344455666543
No 6
>2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1
Probab=45.67 E-value=94 Score=24.19 Aligned_cols=80 Identities=15% Similarity=0.137 Sum_probs=41.6
Q ss_pred HHHHhhchhhHHHHHhHHHhHHHHHHc---chhchhHHHHHHHHHhcCccccCCcchhHHHHHHhHHHHHHHHHHHHHhc
Q 030586 45 PLFGCLGIAFKFAEMDYVAKVDDLAEA---SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILAA 121 (175)
Q Consensus 45 ~~~d~lG~vf~~v~~Dv~~kI~~l~~~---~~~~~tl~~mv~~E~~~~~~~~~~s~~~~LLwL~RaL~Fi~~~l~~l~~~ 121 (175)
.++|.+=.-+.++-.++..+|+.++.. +..-..++++.... +.++.|+|++.=....+..|...
T Consensus 175 ~lld~ivd~y~~~l~~i~~~id~lE~~v~~~~~~~~l~~l~~lr-------------r~l~~lrr~l~p~~~vl~~L~~~ 241 (269)
T 2bbh_A 175 SLIDALVDDYFVLLEKIDDEIDVLEEEVLERPEKETVQRTHQLK-------------RNLVELRKTIWPLREVLSSLYRD 241 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 466666556667777788888888763 22223455544433 67888888888888888888653
Q ss_pred C----CCCchhHHHHHHHhh
Q 030586 122 E----GNSLKDPASKAYTQV 137 (175)
Q Consensus 122 ~----~~~l~~~~~~AY~~t 137 (175)
. ++....-.++.|+..
T Consensus 242 ~~~~~~~~~~~~lrDv~dh~ 261 (269)
T 2bbh_A 242 VPPLIEKETVPYFRDVYDHT 261 (269)
T ss_dssp HHHHTC--------------
T ss_pred CCccCCHHHHHHHHHHHHHH
Confidence 2 234445566666554
No 7
>2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus}
Probab=41.73 E-value=1e+02 Score=23.98 Aligned_cols=81 Identities=12% Similarity=0.177 Sum_probs=50.3
Q ss_pred HHHHHhhchhhHHHHHhHHHhHHHHHHc---chhchhHHHHHHHHHhcCccccCCcchhHHHHHHhHHHHHHHHHHHHHh
Q 030586 44 SPLFGCLGIAFKFAEMDYVAKVDDLAEA---SKSILTLQSVIDRDIEGNCVRKAGSHTRNLLRVKRGLDMVRVLFEQILA 120 (175)
Q Consensus 44 ~~~~d~lG~vf~~v~~Dv~~kI~~l~~~---~~~~~tl~~mv~~E~~~~~~~~~~s~~~~LLwL~RaL~Fi~~~l~~l~~ 120 (175)
..++|.+=.-+.++-.++..+|+.+++. +.. ..++++.... +.++.|+|++.=....+..|..
T Consensus 175 ~~lld~ivd~y~~~l~~i~~~id~lE~~l~~~~~-~~l~~l~~lr-------------r~l~~lrr~l~p~~~vl~~L~~ 240 (266)
T 2hn1_A 175 YTILDAVVDSYFEALLKISDEIEVLEDEVVSGDS-TLIGKIHSLK-------------REILAFRNAVWPLRDVLSFFTR 240 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CCCCHHHHHH-------------HHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH-HHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555555566666677777766542 111 3334433332 6778888888888888888876
Q ss_pred cC----CCCchhHHHHHHHhhh
Q 030586 121 AE----GNSLKDPASKAYTQVF 138 (175)
Q Consensus 121 ~~----~~~l~~~~~~AY~~tL 138 (175)
.+ ++....-.++.|+.+.
T Consensus 241 ~~~~~~~~~~~~~lrDv~dh~~ 262 (266)
T 2hn1_A 241 VEHELIGEEVKVYYRDVYDHAV 262 (266)
T ss_dssp CCCTTSCTTTHHHHHHHHHHHH
T ss_pred cCCccCCHHHHHHHHHHHHHHH
Confidence 53 3456667788887653
No 8
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=23.43 E-value=3e+02 Score=22.31 Aligned_cols=94 Identities=14% Similarity=0.254 Sum_probs=53.3
Q ss_pred HHHHHHhHHHHHHHhh-------c--hhhHH-HHHhHHHhHHHH----------HHcchhchhHHHHHHHHHhcCccccC
Q 030586 35 AFSRACSYVSPLFGCL-------G--IAFKF-AEMDYVAKVDDL----------AEASKSILTLQSVIDRDIEGNCVRKA 94 (175)
Q Consensus 35 ~fl~a~~~l~~~~d~l-------G--~vf~~-v~~Dv~~kI~~l----------~~~~~~~~tl~~mv~~E~~~~~~~~~ 94 (175)
+...-|.+|+.++|.. | .||.. .|.|.-.=+-.. +..-..|+.-.++...++.
T Consensus 119 EL~~iC~dil~lld~~Lip~a~~~EskVFY~KMKGDYyRYlAE~~~g~~rk~~~e~a~~aY~~A~~iA~~~L~------- 191 (261)
T 3ubw_A 119 ELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELP------- 191 (261)
T ss_dssp HHHHHHHHHHHHHHHTHHHHCCSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHSC-------
T ss_pred HHHHHHHHHHHHHHHhccccCCcHHHHHHHHHhhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHHhhCC-------
Confidence 4566799999999864 1 25555 566653211111 1112344444443333321
Q ss_pred CcchhHHHHHHhHHHHHHHHHHHHHhcCCCCchhHHHHHHHhhhcc
Q 030586 95 GSHTRNLLRVKRGLDMVRVLFEQILAAEGNSLKDPASKAYTQVFAP 140 (175)
Q Consensus 95 ~s~~~~LLwL~RaL~Fi~~~l~~l~~~~~~~l~~~~~~AY~~tL~~ 140 (175)
. ..=+||-=+|+|- .|+-.+..+| +..-.+|+.|++.+.+.
T Consensus 192 --p-ThPirLGLaLNfS-VFyYEIln~p-~~Ac~LAk~AFd~Ai~e 232 (261)
T 3ubw_A 192 --P-THPIRLGLALNFS-VFYYEILNSP-DRACRLAKAAFDDAIAE 232 (261)
T ss_dssp --T-TCHHHHHHHHHHH-HHHHHTSCCH-HHHHHHHHHHHHHHHHT
T ss_pred --C-CCcHHHHHHHHHH-HHHHHHcCCH-HHHHHHHHHHHHHHHHH
Confidence 1 2237899999996 5777777665 44556777888876543
No 9
>2kdr_X NS4B, P27, non-structural protein 4B; HCV, 227-254 segment, membranous WEB, replication complex, membrane, transmembrane, RNA-binding; NMR {Hepatitis c virus}
Probab=22.24 E-value=15 Score=19.99 Aligned_cols=10 Identities=30% Similarity=0.717 Sum_probs=7.0
Q ss_pred hhhcccchhH
Q 030586 136 QVFAPHHGWA 145 (175)
Q Consensus 136 ~tL~~yH~w~ 145 (175)
.-|+.+|.|+
T Consensus 18 sLlr~lh~wi 27 (28)
T 2kdr_X 18 QLLRRLHQWI 27 (28)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhhc
Confidence 3477778876
No 10
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=22.00 E-value=84 Score=18.83 Aligned_cols=29 Identities=14% Similarity=0.316 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhhhccCCCCCChHHHHHHHhHH
Q 030586 12 KISESFKELAATVNSQAADVELAAFSRACSYV 43 (175)
Q Consensus 12 ~~~~~f~~~~~~~~~~~~~i~~~~fl~a~~~l 43 (175)
++...|..+. ...+|.|+..+|..+++.+
T Consensus 4 ~l~~~F~~~D---~~~~G~i~~~el~~~l~~~ 32 (78)
T 1k9u_A 4 DMERIFKRFD---TNGDGKISLSELTDALRTL 32 (78)
T ss_dssp HHHHHHHHHC---TTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHC---CCCCCcCcHHHHHHHHHHh
Confidence 3445555542 2345556766666666544
No 11
>1z21_A YOP proteins translocation protein H; plague, type III secretion, YOPR, cell invasion; 1.50A {Yersinia pestis} SCOP: a.243.1.2
Probab=20.91 E-value=93 Score=22.03 Aligned_cols=47 Identities=13% Similarity=0.247 Sum_probs=31.8
Q ss_pred HhHHHHHHHhhchhhHHHHHhHHHhHHHHHHcchhchhHHHHHHHHHh
Q 030586 40 CSYVSPLFGCLGIAFKFAEMDYVAKVDDLAEASKSILTLQSVIDRDIE 87 (175)
Q Consensus 40 ~~~l~~~~d~lG~vf~~v~~Dv~~kI~~l~~~~~~~~tl~~mv~~E~~ 87 (175)
-+.+++=||.+|+--.-|=-++.++|+. ...+....+|.+++..|..
T Consensus 59 LRa~~ReFdPlg~r~EtvLL~vL~~ik~-~~~~~g~eyL~~LaRrELm 105 (112)
T 1z21_A 59 LRSVLQQFDSFGKRWEAILLQVLEGIKP-NESQVGLPYLSELINKELM 105 (112)
T ss_dssp HHHHHHHHSCSSHHHHHHHHHHHHTC---------CHHHHHHHHHHHH
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHccc-CCCCCchHHHHHHHHHHHH
Confidence 4678888999998777777788888877 3334556679999999964
Done!