BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030588
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93VG8|PPDEX_ARATH DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486
PE=2 SV=1
Length = 224
Score = 194 bits (493), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 108/128 (84%)
Query: 18 TQVVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFI 77
T V LNVYDLTPVN+Y YWFG GIFHSGIE H EY +GAH++P SGV+EVEPR+CPGFI
Sbjct: 26 TPVYLNVYDLTPVNNYLYWFGIGIFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNCPGFI 85
Query: 78 YRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWV 137
+R S+LLG +M S+FR+++E + +YHGDTY+LI+KNCNHFT+++ +LTGK IPGW+
Sbjct: 86 FRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWI 145
Query: 138 NRLARLGT 145
NRLAR+G+
Sbjct: 146 NRLARVGS 153
>sp|Q5PQ09|DESI2_XENLA Desumoylating isopeptidase 2 OS=Xenopus laevis GN=desi2 PE=2 SV=1
Length = 192
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
++LNVYD+ +N YT G G+FHSGI+V+G+E+ +G H +P SGVFE+ P
Sbjct: 6 IILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDT 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +I LG + ++ IE EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 66 FKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 125
Query: 136 WVNRLARLGT 145
WVNRLA T
Sbjct: 126 WVNRLAYFST 135
>sp|Q9D291|DESI2_MOUSE Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=2 SV=1
Length = 194
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGTKNSSC 150
W+NRLA SSC
Sbjct: 127 WINRLAYF----SSC 137
>sp|Q5XIT6|DESI2_RAT Desumoylating isopeptidase 2 OS=Rattus norvegicus GN=Desi2 PE=2
SV=1
Length = 194
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCP----G 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNAAELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGTKNSSC 150
W+NRLA SSC
Sbjct: 127 WINRLAYF----SSC 137
>sp|Q5R456|DESI2_PONAB Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1
Length = 194
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGTKNSSC 150
W+NRLA SSC
Sbjct: 127 WINRLAYF----SSC 137
>sp|Q9BSY9|DESI2_HUMAN Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1
Length = 194
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGTKNSSC 150
W+NRLA SSC
Sbjct: 127 WINRLAYF----SSC 137
>sp|A3QRX8|DESI2_PIG Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1
Length = 194
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 83/135 (61%), Gaps = 8/135 (5%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
VVLNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 7 VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E EY G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 67 FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126
Query: 136 WVNRLARLGTKNSSC 150
W+NRLA SSC
Sbjct: 127 WINRLAYF----SSC 137
>sp|Q5ZIV7|DESI2_CHICK Desumoylating isopeptidase 2 OS=Gallus gallus GN=DESI2 PE=2 SV=1
Length = 193
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
V+LNVYD+ +N YT G G+FHSGIEV+G+E+ +G H +P SG+FE+ P +
Sbjct: 6 VILNVYDMYWMNEYTSSLGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +++LG + + +E E+ G+ Y+L+ KNCNHF+ ++ L GK IP
Sbjct: 66 FKFKEAVVLGSTDFMEDDIEKIVEELGKEFKGNAYHLMHKNCNHFSSALSEILCGKEIPR 125
Query: 136 WVNRLA 141
WVNRLA
Sbjct: 126 WVNRLA 131
>sp|Q6DC39|DESI2_DANRE Desumoylating isopeptidase 2 OS=Danio rerio GN=desi2 PE=2 SV=1
Length = 196
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 79/126 (62%), Gaps = 4/126 (3%)
Query: 20 VVLNVYDLTPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSC----PG 75
V+LNVYD+ +N +T G G+FHSGIE++G+E+ +G H +P SG+FE+ P
Sbjct: 6 VILNVYDMYWINEFTSSLGIGVFHSGIEIYGREFAYGGHPYPFSGIFEITPGDATELGET 65
Query: 76 FIYRASILLGRINMPPSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPG 135
F ++ +I+LG + + +E EY G+ Y+L+ KNCNHF+ ++ L G+ IP
Sbjct: 66 FKFKEAIVLGSTDFTEEDVERIVEEMGKEYKGNAYHLMHKNCNHFSSALSEILCGREIPR 125
Query: 136 WVNRLA 141
WVNRLA
Sbjct: 126 WVNRLA 131
>sp|Q8X1T0|HAG1_SCHPO DeSI-like protein hag1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=hag1 PE=1 SV=1
Length = 201
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
Query: 19 QVVLNVYDL---TPVNSYTYWFGFGIFHSGIEVHGKEYGFGAHDFPVS-GVFEVEPRS-C 73
+V +NVYDL +PVN + G GI+H+G+ + GKEY FGAH+ P S GVF PR
Sbjct: 2 KVYINVYDLMPDSPVNKLAWTLGLGIYHTGLVLEGKEYAFGAHEIPGSTGVFATMPRPPL 61
Query: 74 PGFIYRASILLGRINMP-PSEFRTFIECSASEYHGDTYNLISKNCNHFTDDIAWRLTGKH 132
G +R SI L +P P R I S E+ G +Y+L+ +NCNHFT+ A LTG
Sbjct: 62 EGCRWRCSIALPNCTLPKPDVDRILIRLS-QEFTGLSYSLLERNCNHFTNAAAIELTGSP 120
Query: 133 IPGWVNRLARLG 144
IP ++NR++R+G
Sbjct: 121 IPSFLNRISRIG 132
>sp|Q4KM30|DESI1_RAT Desumoylating isopeptidase 1 OS=Rattus norvegicus GN=Desi1 PE=2
SV=1
Length = 168
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 40 GIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRTFIE 99
GI+H+ I VH E+ FG+ SG+ P + + +G + F ++
Sbjct: 35 GIWHTSIVVHKDEFFFGS-----SGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLS 89
Query: 100 C-SASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 90 SLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q9CQT7|DESI1_MOUSE Desumoylating isopeptidase 1 OS=Mus musculus GN=Desi1 PE=1 SV=1
Length = 168
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 40 GIFHSGIEVHGKEYGFGAHDFPVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRTFIE 99
GI+H+ I VH E+ FG+ SG+ P + + +G + F ++
Sbjct: 35 GIWHTSIVVHKDEFFFGS-----SGISSCTPGGTLLGPPDSVVDVGNTEVTEEIFLEYLS 89
Query: 100 C-SASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 90 SLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q6ICB0|DESI1_HUMAN Desumoylating isopeptidase 1 OS=Homo sapiens GN=DESI1 PE=1 SV=1
Length = 168
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 40 GIFHSGIEVHGKEYGFGAHDF---PVSGVFEVEPRSCPGFIYRASILLGRINMPPSEFRT 96
GI+H+ I VH E+ FG+ P G P S + +G + F
Sbjct: 35 GIWHTSIVVHKDEFFFGSGGISSCPPGGTLLGPPDSV--------VDVGSTEVTEEIFLE 86
Query: 97 FIEC-SASEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
++ S + G+ YNL NCN F++++A LTG+ IP ++ L
Sbjct: 87 YLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDL 131
>sp|Q6GLM5|DESI1_XENLA Desumoylating isopeptidase 1 OS=Xenopus laevis GN=desi1 PE=2 SV=1
Length = 169
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 103 SEYHGDTYNLISKNCNHFTDDIAWRLTGKHIPGWVNRL 140
S + G++Y+L NCN F++++A LTGK IP ++ L
Sbjct: 95 SGFSGESYHLFDHNCNTFSNEVAQFLTGKKIPSYITEL 132
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,761,748
Number of Sequences: 539616
Number of extensions: 2690307
Number of successful extensions: 4023
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3996
Number of HSP's gapped (non-prelim): 15
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)