BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030594
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80517|BCB2_ARATH Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1
Length = 202
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 73/110 (66%), Gaps = 6/110 (5%)
Query: 11 VAPAVYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGLHKVDRVSESDYNNC 70
+ P AV YT+ WT G DY+ W +GKTF+VGD+L F YG H VD V ++ Y+ C
Sbjct: 23 IVPGAVAVTYTIE----WTTGVDYSGWATGKTFRVGDILEFKYGSSHTVDVVDKAGYDGC 78
Query: 71 ASSNALESHDDGNTRINLKAPGTQYFICPTAGHCP--GGMKLAVTVVAAS 118
+S++ E+H DG+T+I+LK G YFIC T GHC GGMKLAV VVA S
Sbjct: 79 DASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVVAGS 128
>sp|Q41001|BCP_PEA Blue copper protein OS=Pisum sativum PE=2 SV=1
Length = 189
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 71/111 (63%), Gaps = 1/111 (0%)
Query: 5 LLILLLVAPAVYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYG-GLHKVDRVS 63
LL ++ +A A YTVGDTSGW G DY++W S KTF VGD LVFNYG G H VD V
Sbjct: 12 LLAIINMALPSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVK 71
Query: 64 ESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTV 114
ESDY +C S N++ + G T I LK G YFIC GH GGMKL++ V
Sbjct: 72 ESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKV 122
>sp|Q07488|BCB1_ARATH Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2
Length = 196
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 19 EYTVGDTSGWTQGFD---YTSWVSGKTFKVGDVLVFNYG-GLHKVDRVSESDYNNCASSN 74
+Y VGD + WT+ D YT+W +GKTF+VGD L F++ G H V VSE+ + NC
Sbjct: 24 DYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEK 83
Query: 75 ALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAASPPGTNTPSGSPPSTPA 134
+ +I L G QYFIC HC G KL++TVVAA G TP +TPA
Sbjct: 84 PISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGATGGATPGAG--ATPA 141
Query: 135 TTGTP 139
TP
Sbjct: 142 PGSTP 146
>sp|P00302|STEL_TOXVR Stellacyanin OS=Toxicodendron vernicifluum PE=1 SV=1
Length = 107
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Query: 20 YTVGDTSGWTQGF----DYT-SWVSGKTFKVGDVLVFNYGG-LHKVDRVSESDYNNCASS 73
YTVGD++GW F DY W S KTF +GDVLVF Y H VD+V++ +Y +C +
Sbjct: 3 YTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDT 62
Query: 74 NALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAAS 118
+ S++ GB RINLK G +Y+IC HC G K+ + V S
Sbjct: 63 TPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHINVTVRS 107
>sp|Q8LG89|BABL_ARATH Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=1 SV=2
Length = 129
Score = 89.7 bits (221), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 4 ALLILLLVAPAVYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYG-GLHKVDRV 62
A+ +LLL A V A YTVGD+ WT F+ W GK F+ GDVLVFNY +H V +V
Sbjct: 20 AVSVLLLQADYVQAATYTVGDSGIWT--FNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKV 77
Query: 63 SESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVV 115
YNNC + + + G RI L + G +FIC HC MK+AVT V
Sbjct: 78 DSGSYNNCKTPTGAKPYTSGKDRITL-SKGQNFFICNFPNHCESDMKIAVTAV 129
>sp|P60496|BABL_LILLO Chemocyanin OS=Lilium longiflorum PE=1 SV=1
Length = 126
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 17 AVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYG-GLHKVDRVSESDYNNCASSNA 75
+V YTVGD GWT F + W +GKTF+ GDVLVF Y +H V V Y +C +S
Sbjct: 30 SVVYTVGDGGGWT--FGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPG 87
Query: 76 LESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVT 113
G+ RI L + GT YFIC GHC GG+K+AVT
Sbjct: 88 SRVFKSGDDRITL-SRGTNYFICSVPGHCQGGLKIAVT 124
>sp|P80728|MAVI_CUCPE Mavicyanin OS=Cucurbita pepo PE=1 SV=1
Length = 108
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 17 AVEYTVGDTSGWTQ--GFDYTSWVSGKTFKVGDVLVFNYGG-LHKVDRVSESDYNNCASS 73
A + VGD++GWT +DY W S F VGD L+FNY H V +V + + +C SS
Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60
Query: 74 NALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTV 114
+ S+ G I LK PGT YF+C GHC G K+ + V
Sbjct: 61 SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKV 101
>sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1 OS=Arabidopsis thaliana GN=At2g25060
PE=1 SV=2
Length = 182
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 3 TALLILLLVAPAVYAVEYTVGDTSG-W----TQGFDYTSWVSGKTFKVGDVLVFNY-GGL 56
A+ L+ + A E TVG SG W + + +T W FKVGD +VF Y G
Sbjct: 14 VAIFSLIFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGK 73
Query: 57 HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVA 116
V V++ YN+C ++N L ++ DG T++ L G YFI GHC G KL++ V++
Sbjct: 74 DSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVIS 133
>sp|Q39131|LAML_ARATH Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1
Length = 172
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 1 MATALLILLLVA---PAVYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYG-GL 56
+ TA+++ L+A P V A +YTVG+ W +YT W GK F +GD L F +
Sbjct: 7 LITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQ 66
Query: 57 HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQ-YFICPTAGHCPGGMKLAVTVV 115
H + V+++DY C + + + + G R + T+ Y++ G C GGMKL+V V
Sbjct: 67 HNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVE 126
Query: 116 AASPPGTNTPSGSPPSTPATTG 137
PP + P + S TG
Sbjct: 127 KLPPPPKSAPVKNIGSVSMVTG 148
>sp|P00303|BABL_CUCSA Basic blue protein OS=Cucumis sativus PE=1 SV=1
Length = 96
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 20 YTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYG-GLHKVDRVSESDYNNCASSNALES 78
Y VG + GWT F+ SW GK F+ GD+L+FNY +H V V++ ++ C + +
Sbjct: 3 YVVGGSGGWT--FNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60
Query: 79 HDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVV 115
+ G +I L G YFIC GHC GMK+AV +
Sbjct: 61 YTSGRDQIKL-PKGQSYFICNFPGHCQSGMKIAVNAL 96
>sp|P42849|UMEC_ARMRU Umecyanin OS=Armoracia rusticana PE=1 SV=1
Length = 115
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 19 EYTVGDTSGWTQGFD---YTSWVSGKTFKVGDVLVFNYG-GLHKVDRVSESDYNNCASSN 74
+Y VG W + D Y +W +GKTF+VGD L F++ G+H V V++ ++NC N
Sbjct: 2 DYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKEN 61
Query: 75 ALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVV 115
+ +I L G QY+IC HC G KL++ VV
Sbjct: 62 PISHMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSINVV 102
>sp|P93329|NO20_MEDTR Early nodulin-20 OS=Medicago truncatula GN=ENOD20 PE=3 SV=1
Length = 268
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 19 EYTVGDTSG-WT----QGFDYTSWVSGKTFKVGDVLVFNYGG-LHKVDRVSESDYNNCAS 72
+Y VGD+ W T W S F VGD + F Y V V E DY+ C
Sbjct: 26 DYLVGDSENSWKFPLPTRHALTRWASNYQFIVGDTITFQYNNKTESVHEVEEEDYDRCGI 85
Query: 73 SNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAA 117
H DGNT + LK G +FI HC G+KLAV V+ A
Sbjct: 86 RGEHVDHYDGNTMVVLKKTGIHHFISGKKRHCRLGLKLAVVVMVA 130
>sp|P93328|NO16_MEDTR Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1
Length = 180
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 1 MATALLILLLVAPAVYAV-------EYTVGDT-SGWT----QGFDYTSWVSGKTFKVGDV 48
MA++ ILL++ +++ + +Y +GD+ + W + W S F VGD
Sbjct: 1 MASSSPILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDT 60
Query: 49 LVFNYGG-LHKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGG 107
++F Y V V+E DY C ++ H DGNT++ L G +FI T HC G
Sbjct: 61 ILFEYDNETESVHEVNEHDYIMCHTNGEHVEHHDGNTKVVLDKIGVYHFISGTKRHCKMG 120
Query: 108 MKLAVTV 114
+KLAV V
Sbjct: 121 LKLAVVV 127
>sp|Q9T076|ENL2_ARATH Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520
PE=1 SV=1
Length = 349
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 3/123 (2%)
Query: 3 TALLILLLVAPAVYAVEYTVGDTSGWTQG--FDYTSWVSGKTFKVGDVLVFNYG-GLHKV 59
T LL L + A ++ VG + W +Y SW F V D L F+Y G V
Sbjct: 14 TILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSV 73
Query: 60 DRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAASP 119
V+++DY+ C + N ++ DDG++ I+L G YFI +C G KL V V++A
Sbjct: 74 LEVNKADYDACNTKNPIKRVDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARI 133
Query: 120 PGT 122
P T
Sbjct: 134 PST 136
>sp|P29602|CPC_CUCSA Cucumber peeling cupredoxin OS=Cucumis sativus PE=1 SV=3
Length = 137
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 12/108 (11%)
Query: 20 YTVGDTSGWTQ----GFDYTSWVSGKTFKVGDVLVFNY-GGLHKVDRV-SESDYNNCA-- 71
+ VGD +GW+ F Y+ W +GKTF+VGD L FN+ H V + ++ ++ C
Sbjct: 5 HIVGDNTGWSVPSSPNF-YSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFV 63
Query: 72 -SSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAAS 118
S N +E R L G YF+C HC G KL++ VVAA+
Sbjct: 64 NSDNDVERTSPVIER--LDELGMHYFVCTVGTHCSNGQKLSINVVAAN 109
>sp|Q02917|NO552_SOYBN Early nodulin-55-2 OS=Glycine max GN=ENOD55-2 PE=2 SV=1
Length = 187
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 5 LLILLLVAPAVYAVEYTVGDTS-GW----TQGFDYTSWVSGKTFKVGDVLVFNYGGL-HK 58
+L + L+ A +Y VG + W ++ + W + FK+GD L+F Y
Sbjct: 14 MLAMCLLISTSEAEKYVVGGSEKSWKFPLSKPDSLSHWANSHRFKIGDTLIFKYEKRTES 73
Query: 59 VDRVSESDYNNCASSNALE-SHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAA 117
V +E+DY C + + GNT++ L PG ++FI HC G+KLAV V+++
Sbjct: 74 VHEGNETDYEGCNTVGKYHIVFNGGNTKVMLTKPGFRHFISGNQSHCQMGLKLAVLVISS 133
Query: 118 SPPGTN 123
+ N
Sbjct: 134 NKTKKN 139
>sp|Q8LC95|ENL3_ARATH Early nodulin-like protein 3 OS=Arabidopsis thaliana GN=At5g25090
PE=1 SV=2
Length = 186
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 1 MATALLILLLVAPAVYAVEYTVG-DTSGW----TQGFDYTSWVSGKTFKVGDVLVFNYGG 55
+AT LI L+ V + E VG TS W + W F+VGD LV+ Y
Sbjct: 7 VATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTLVWKYDE 66
Query: 56 LHK-VDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTV 114
V +V++ Y NC ++N ++ +G+T++ L+ G +FI + +C G KL + V
Sbjct: 67 EKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGEKLHIVV 126
Query: 115 VAA 117
+++
Sbjct: 127 MSS 129
>sp|Q5JNJ5|ENL1_ORYSJ Early nodulin-like protein 1 OS=Oryza sativa subsp. japonica
GN=ENODL1 PE=1 SV=1
Length = 237
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 4 ALLILLLVAPAVYAVEYTVGDTSGWT----QGFDYTSWVSGKTFKVGDVLVF----NYGG 55
A+L L+ V + A + G GW + F+Y W F+V D +VF GG
Sbjct: 15 AVLGLVAVFSSSEAYVFYAGGRDGWVVDPAESFNY--WAERNRFQVNDTIVFLHDDEVGG 72
Query: 56 LHKVDRVSESDYNNCASSNALESHDD---GNTRINLKAPGTQYFICPTAGHCPGGMKLAV 112
V +V+E D++ C++ N ++ +D G + G +FI C G KL +
Sbjct: 73 --SVLQVTEGDFDTCSTGNPVQRLEDVAAGRSVFRFDRSGPFFFISGDEDRCQKGQKLYI 130
Query: 113 TVVAASPPGTNTPSGSPPSTPATTGTPPSTTS 144
V+A P PS +P PA P S+ S
Sbjct: 131 IVMAVRP---TKPSEAP--EPAGAAGPVSSKS 157
>sp|Q05544|NO551_SOYBN Early nodulin-55-1 (Fragment) OS=Glycine max GN=ENOD55-1 PE=2 SV=1
Length = 137
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 59 VDRVSESDYNNCASSNALESH---DDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVV 115
V V+E+DY C + + H +DGNT++ L G ++FI HC G+KL V V+
Sbjct: 9 VHEVNETDYEQCNTVG--KEHVLFNDGNTKVMLTKSGFRHFISGNQSHCQMGLKLMVVVM 66
Query: 116 AASPP 120
+ +
Sbjct: 67 SNNTK 71
>sp|C5JIS0|FCJ1_AJEDS Formation of crista junctions protein 1 OS=Ajellomyces dermatitidis
(strain SLH14081) GN=FCJ1 PE=3 SV=1
Length = 665
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 99 PTAGHCPGGMKLAVTVVAASPPGTNTPSGSPPSTPATTGT-PPSTTSSPPNGAA 151
P A P + A + PPG N P P++P+T T P T S PP A
Sbjct: 35 PNAAATPELSQKATNSTSTKPPGPNDPDVRSPASPSTGSTLHPETVSKPPQSPA 88
>sp|C5GFG7|FCJ1_AJEDR Formation of crista junctions protein 1 OS=Ajellomyces dermatitidis
(strain ER-3 / ATCC MYA-2586) GN=FCJ1 PE=3 SV=1
Length = 653
Score = 39.3 bits (90), Expect = 0.015, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 99 PTAGHCPGGMKLAVTVVAASPPGTNTPSGSPPSTPATTGT-PPSTTSSPPNGAA 151
P A P + A + PPG N P P++P+T T P T S PP A
Sbjct: 23 PNAAATPELSQKATNSTSTKPPGPNDPDVRSPASPSTGSTLHPETVSKPPQSPA 76
>sp|P19158|IRA2_YEAST Inhibitory regulator protein IRA2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=IRA2 PE=1 SV=2
Length = 3079
Score = 37.4 bits (85), Expect = 0.044, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 11/104 (10%)
Query: 56 LHKVDRVSESDYNNCASSNALESHDDGNTRINLKA-PGTQYFICPTAGHCPGG----MKL 110
++ + V S N + N+L S NL + P + + P A H GG ++
Sbjct: 905 MNTLSLVGSSTSRNSDNVNSLNSSPK-----NLSSDPYLSHLVAPRARHALGGPSSIIRN 959
Query: 111 AVTVVAASPPGTNTPSG-SPPSTPATTGTPPSTTSSPPNGAACF 153
+ SPPGT S P T + + TP + T+S P +A F
Sbjct: 960 KIPTTLTSPPGTEKSSPVQRPQTESISATPMAITNSTPLSSAAF 1003
>sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=PRP5 PE=3 SV=2
Length = 1184
Score = 35.8 bits (81), Expect = 0.14, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 116 AASPPGTNTPSGSPPSTPATTGTPPSTTSSP 146
A +P +P+GS PSTPA TPP + P
Sbjct: 203 AGTPGSGASPAGSVPSTPAVAATPPPREAKP 233
>sp|P00304|MPAA3_AMBEL Pollen allergen Amb a 3 OS=Ambrosia artemisiifolia var. elatior
PE=1 SV=2
Length = 101
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Query: 20 YTVG--DTSGWTQGFD---YTSWVSGKTFKVGDVLVFNY-GGLHKVDRV-SESDYNNCAS 72
Y VG + GW D Y W + + FK DVL FN+ G V V E Y+ C
Sbjct: 4 YLVGGPELGGWKLQSDPRAYALWSARQQFKTTDVLWFNFTTGEDSVAEVWREEAYHACDI 63
Query: 73 SNALESHDDGNTRINLKAPGTQYFIC 98
+ + G R L PG+ +FIC
Sbjct: 64 KDPIRLEPGGPDRFTLLTPGS-HFIC 88
>sp|Q0CCL1|RSP5_ASPTN Probable E3 ubiquitin-protein ligase hulA OS=Aspergillus terreus
(strain NIH 2624 / FGSC A1156) GN=hulA PE=3 SV=1
Length = 808
Score = 35.0 bits (79), Expect = 0.24, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 44 KVGDVLVFNYGGLHKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQ----YFICP 99
++GDV+ GG + R + +N L N NL P T
Sbjct: 95 RIGDVIDLQMGGDEMLTRDLKKSNDNLVVHGKLII----NLSTNLSTPNTNQANGLHRSN 150
Query: 100 TAGHCPGGMKLAVTVVAASP------PGTNTPSGSPPSTPATTGTPPSTTSSPPNGAA 151
G+ VT ASP P + PS +P P+TT PS+T +P NGAA
Sbjct: 151 LQSSTSSGLVPQVTAPHASPGPSQLDPTASNPSLNPQRVPSTT--RPSSTVAPVNGAA 206
>sp|Q1LUA6|TRIO_DANRE Triple functional domain protein OS=Danio rerio GN=trio PE=3 SV=1
Length = 3028
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 120 PGTNTPSGSPPSTPATTGTPPSTTSSPPNGAACFFCSL 157
PGT +P SP +TPA + P + P G++ F+ S+
Sbjct: 2376 PGTVSPMASPLATPAFKDSIPPCSPGPKTGSSSFWSSV 2413
>sp|Q705F9|VL2_BPV3 Minor capsid protein L2 OS=Bovine papillomavirus type 3 GN=L2 PE=3
SV=1
Length = 518
Score = 34.3 bits (77), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 14/114 (12%)
Query: 46 GDVLVFNYGGLHKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCP 105
GDVL N G + D E DYN S LE +R ++ + G P
Sbjct: 400 GDVL--NEGNIEFPDSTLEDDYNEDFSRARLEITTSARSRTSI--------VTVQEGIPP 449
Query: 106 GGMKL----AVTVVAASPPGTNTPSGSPPSTPATTGTPPSTTSSPPNGAACFFC 155
G +KL A T+V P +N P P T P + G A FF
Sbjct: 450 GSVKLFINDAETIVTPHGPESNDTDRYQPFIPVTPAATPDIIITFEEGTATFFL 503
>sp|Q80TZ9|RERE_MOUSE Arginine-glutamic acid dipeptide repeats protein OS=Mus musculus
GN=Rere PE=1 SV=3
Length = 1558
Score = 33.5 bits (75), Expect = 0.67, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 66 DYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAASPPGT-NT 124
D +N ++S ++ S D + + A P A P G A + + +PPGT
Sbjct: 705 DQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPSG---AASAPSTAPPGTPQL 761
Query: 125 PSGSPPSTPATTGTPPS---TTSSPPN 148
P+ P TP+ T PP TS PPN
Sbjct: 762 PTQGP--TPSATAVPPQGSPATSQPPN 786
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 9/46 (19%)
Query: 114 VVAASPPGTNTPSG-------SPPSTPA--TTGTPPSTTSSPPNGA 150
++ A PP PSG +PP TP T G PS T+ PP G+
Sbjct: 733 MLQAQPPALQAPSGAASAPSTAPPGTPQLPTQGPTPSATAVPPQGS 778
>sp|Q54UW4|Y0777_DICDI Bromodomain-containing protein DDB_G0280777 OS=Dictyostelium
discoideum GN=DDB_G0280777 PE=4 SV=1
Length = 1823
Score = 32.3 bits (72), Expect = 1.6, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 119 PPGTNTPSGSPPSTPATTGTPPSTTSSP--PNGAAC 152
P NTP SPP TP + T + +S+P P A C
Sbjct: 479 PNLLNTPLSSPPYTPCSPSTISTVSSTPTTPQSADC 514
>sp|Q9QYC1|PCX1_MOUSE Pecanex-like protein 1 OS=Mus musculus GN=Pcnx PE=2 SV=3
Length = 2344
Score = 32.3 bits (72), Expect = 1.7, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 27/125 (21%)
Query: 25 TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGLHKVDRVSESDYNNCASSNALESHDDGNT 84
T+ ++ D + G +G++ F H++ + + C S +E D G
Sbjct: 2002 TTSYSDSHDQLKEILGGPISLGNIRNFIVSTWHRLRKGCGA---GCNSGGNIEDSDTGG- 2057
Query: 85 RINLKAPGTQYFICPTAGHCPGGMKLAVTVVAASPPGTNTPSGSP--PSTPATTGTPPST 142
GT CPG + V AS P N GS P A +G P T
Sbjct: 2058 -------GTS---------CPGN-----SAVTASDPHNNVSQGSTGHPGQGAGSGLHPPT 2096
Query: 143 TSSPP 147
TS PP
Sbjct: 2097 TSYPP 2101
>sp|Q9P2R6|RERE_HUMAN Arginine-glutamic acid dipeptide repeats protein OS=Homo sapiens
GN=RERE PE=1 SV=2
Length = 1566
Score = 32.0 bits (71), Expect = 1.9, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 15/87 (17%)
Query: 66 DYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAASPPGTNTP 125
D +N ++S ++ S D + + A P A P G+ T P
Sbjct: 705 DQDNRSTSPSIPSPQDNESDSDSSAQQQMLQAQPPALQAPTGV-------------TPAP 751
Query: 126 SGSPPSTPA--TTGTPPSTTSSPPNGA 150
S +PP TP T G PS T+ PP G+
Sbjct: 752 SSAPPGTPQLPTPGPTPSATAVPPQGS 778
>sp|P27197|AURB_CHLAA Auracyanin-B OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM
635 / J-10-fl) GN=Caur_1950 PE=1 SV=2
Length = 235
Score = 30.4 bits (67), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 68 NNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTV 114
N A + L + + G+ APGT +IC GH GMK +TV
Sbjct: 187 NALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTV 233
>sp|A3LZ57|SEC16_PICST COPII coat assembly protein SEC16 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SEC16 PE=3 SV=2
Length = 2212
Score = 30.0 bits (66), Expect = 7.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 122 TNTPSGSPPSTPATTGTPPSTTSSPPNGAA 151
T PSG P + T PPS + P NGA
Sbjct: 2128 TAAPSGPPSAPSGVTSGPPSIGTGPSNGAG 2157
>sp|Q9HMR7|DP2S_HALSA DNA polymerase II small subunit OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=polB PE=3 SV=2
Length = 508
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 116 AASPPGTNTPSGSPPSTPATTGTPPSTTSSPPN 148
A+S T+ P+ +PP ATT T PS T +PPN
Sbjct: 66 ASSAAQTSAPASTPPDE-ATTHTDPSATDTPPN 97
>sp|B0R7U1|DP2S_HALS3 DNA polymerase II small subunit OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=polB PE=3 SV=1
Length = 508
Score = 29.6 bits (65), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 116 AASPPGTNTPSGSPPSTPATTGTPPSTTSSPPN 148
A+S T+ P+ +PP ATT T PS T +PPN
Sbjct: 66 ASSAAQTSAPASTPPDE-ATTHTDPSATDTPPN 97
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,759,141
Number of Sequences: 539616
Number of extensions: 3285589
Number of successful extensions: 28317
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 24676
Number of HSP's gapped (non-prelim): 3394
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)