Query 030594
Match_columns 175
No_of_seqs 133 out of 841
Neff 5.6
Searched_HMMs 29240
Date Tue Mar 26 02:21:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030594.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030594hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1jer_A Cucumber stellacyanin; 100.0 1.8E-43 6.1E-48 275.5 5.6 105 16-120 2-112 (138)
2 1ws8_A Mavicyanin; oxidized fo 100.0 2.8E-41 9.6E-46 253.5 5.6 104 16-119 1-107 (109)
3 1x9u_A Umecyanin; cupredoxin, 100.0 2.2E-40 7.5E-45 251.2 6.1 103 18-120 2-109 (116)
4 2cbp_A Cucumber basic protein; 100.0 7.5E-39 2.6E-43 235.2 6.1 95 18-115 1-96 (96)
5 1f56_A Plantacyanin; cupredoxi 100.0 1.4E-34 4.8E-39 210.7 7.4 90 18-115 1-91 (91)
6 1qhq_A Protein (auracyanin); e 99.3 5.4E-12 1.8E-16 95.8 8.5 95 15-115 14-139 (140)
7 1bxv_A Plastocyanin; copper pr 99.2 1.7E-11 5.8E-16 85.6 6.1 84 19-115 4-91 (91)
8 2cal_A Rusticyanin; iron respi 99.1 6.7E-11 2.3E-15 92.3 5.4 75 40-115 62-154 (154)
9 1pmy_A Pseudoazurin; electron 99.0 1.9E-09 6.4E-14 81.4 7.9 82 23-117 11-95 (123)
10 2gim_A Plastocyanin; beta shee 99.0 3.2E-09 1.1E-13 76.2 8.8 87 19-115 5-105 (106)
11 1paz_A Pseudoazurin precursor; 98.9 2E-09 6.9E-14 81.2 7.4 82 23-117 11-95 (123)
12 1iuz_A Plastocyanin; electron 98.9 1.4E-09 4.8E-14 77.7 5.6 90 18-115 2-98 (98)
13 1plc_A Plastocyanin; electron 98.9 4.2E-09 1.4E-13 74.9 8.1 89 19-115 2-99 (99)
14 2aan_A Auracyanin A; cupredoxi 98.9 1.7E-08 5.7E-13 76.4 10.0 94 15-115 16-139 (139)
15 1kdj_A Plastocyanin; electron 98.9 5.8E-09 2E-13 74.4 7.0 88 19-115 2-102 (102)
16 3erx_A Pseudoazurin; copper pr 98.8 4.2E-09 1.4E-13 79.6 6.2 79 27-118 15-96 (123)
17 1b3i_A PETE protein, protein ( 98.8 9.5E-09 3.3E-13 72.7 7.7 88 19-115 4-97 (97)
18 1byp_A Protein (plastocyanin); 98.8 1.4E-08 4.7E-13 72.1 7.8 89 19-115 2-99 (99)
19 3tu6_A Pseudoazurin (blue copp 98.8 7.8E-09 2.7E-13 78.6 6.8 83 23-118 12-98 (127)
20 3ef4_A Pseudoazurin, blue copp 98.7 2.4E-08 8.1E-13 75.8 7.7 81 23-116 10-95 (124)
21 2plt_A Plastocyanin; electron 98.7 1.8E-08 6E-13 71.3 6.3 90 18-115 2-98 (98)
22 1pcs_A Plastocyanin; electron 98.7 5E-08 1.7E-12 69.0 6.9 89 19-115 4-98 (98)
23 3cvb_A Plastocyanin; cupredoxi 98.3 1.7E-06 5.8E-11 61.4 6.7 87 19-115 4-104 (105)
24 2ux6_A Pseudoazurin; type-1 co 98.2 2.8E-06 9.6E-11 63.6 5.7 80 23-117 11-93 (122)
25 3c75_A Amicyanin; copper prote 98.1 6.7E-06 2.3E-10 62.1 7.6 76 27-115 54-132 (132)
26 4hci_A Cupredoxin 1; structura 98.1 1.2E-06 3.9E-11 62.6 2.2 83 15-115 11-100 (100)
27 2ov0_A Amicyanin; beta-sandwic 98.1 6.7E-06 2.3E-10 59.2 6.1 83 15-115 16-105 (105)
28 1id2_A Amicyanin; beta barrel, 97.9 2.7E-05 9.3E-10 56.2 7.1 85 17-115 19-106 (106)
29 3ay2_A Lipid modified azurin p 97.9 2E-05 6.7E-10 62.5 6.8 91 18-115 43-166 (167)
30 1cuo_A Protein (azurin ISO-2); 97.9 6.3E-05 2.2E-09 56.9 8.9 90 19-115 4-128 (129)
31 1iko_P Ephrin-B2; greek KEY, g 97.8 7.3E-06 2.5E-10 65.9 1.9 78 43-120 26-144 (178)
32 2iaa_C Azurin; quinoprotein, t 97.6 0.00029 9.8E-09 53.3 8.2 90 19-115 3-127 (128)
33 1nwp_A Azurin; electron transp 97.6 0.00022 7.5E-09 53.9 7.2 90 19-115 4-128 (128)
34 2ccw_A Azurin II, AZN-2; elect 97.5 0.00046 1.6E-08 52.1 8.9 90 19-115 4-128 (129)
35 2cua_A Protein (CUA); CUA cent 97.3 0.0006 2E-08 51.8 6.8 66 40-116 61-135 (135)
36 1iby_A Nitrosocyanin; RED copp 97.2 0.00026 8.9E-09 51.0 3.6 65 40-115 39-111 (112)
37 3czu_B Ephrin-A1; ATP-binding, 97.1 0.00097 3.3E-08 53.6 6.1 76 41-119 50-163 (182)
38 3d12_B Ephrin-B3; beta propell 96.9 0.0013 4.6E-08 50.8 5.5 74 42-115 23-140 (141)
39 1shx_A Ephrin-A5; ephrin signa 96.9 0.0025 8.4E-08 49.2 6.6 75 41-118 23-135 (138)
40 2x11_B Ephrin-A5; receptor-sig 96.8 0.0022 7.6E-08 51.3 6.3 76 41-119 52-165 (177)
41 2vsm_B Ephrin-B2; developmenta 96.7 0.0016 5.4E-08 50.3 4.3 74 43-116 25-139 (140)
42 2wo3_B Ephrin-A2; transferase- 96.0 0.012 4E-07 46.3 5.7 75 42-119 33-146 (157)
43 2dv6_A Nitrite reductase; elec 95.2 0.019 6.7E-07 50.1 5.1 77 39-119 55-135 (447)
44 3s8f_B Cytochrome C oxidase su 95.2 0.044 1.5E-06 43.1 6.6 69 39-116 93-168 (168)
45 1fwx_A Nitrous oxide reductase 94.2 0.064 2.2E-06 49.9 5.9 67 40-117 514-593 (595)
46 3sbq_A Nitrous-oxide reductase 94.0 0.064 2.2E-06 50.2 5.6 73 27-116 552-637 (638)
47 3hei_B Ephrin-A1; EPH receptor 93.7 0.082 2.8E-06 40.3 4.8 73 42-115 23-131 (132)
48 3fsa_A Azurin; copper, cupredo 93.5 0.76 2.6E-05 34.5 9.7 86 20-115 5-125 (125)
49 1oe1_A Dissimilatory copper-co 83.4 1.3 4.5E-05 37.1 4.8 76 40-118 66-154 (336)
50 1mzy_A Copper-containing nitri 83.3 1.3 4.5E-05 37.0 4.7 75 40-117 65-153 (333)
51 1oe1_A Dissimilatory copper-co 78.0 2 7E-05 35.8 4.2 37 84-120 285-322 (336)
52 2bw4_A Copper-containing nitri 72.8 3.8 0.00013 34.2 4.5 75 41-118 73-160 (340)
53 1kbv_A ANIA, major outer membr 72.7 3.1 0.00011 34.9 3.9 75 40-117 71-157 (327)
54 2zoo_A Probable nitrite reduct 71.5 1.4 4.9E-05 38.2 1.6 75 40-118 61-148 (442)
55 3gdc_A Multicopper oxidase; be 71.0 4.8 0.00016 33.1 4.6 78 40-118 67-156 (288)
56 3l6w_A Hemocyanin 1; cupredoxi 70.1 5.3 0.00018 36.3 5.0 81 26-115 405-491 (491)
57 1mzy_A Copper-containing nitri 67.6 3.8 0.00013 34.2 3.4 35 85-119 286-321 (333)
58 2gsm_B Cytochrome C oxidase su 62.6 11 0.00039 31.1 5.3 68 41-116 173-246 (262)
59 3hb3_B Cytochrome C oxidase su 62.2 11 0.00037 32.0 5.2 69 42-118 192-266 (298)
60 1yel_A AT1G16640; CESG, protei 61.4 2.1 7.3E-05 30.1 0.5 19 38-56 73-91 (104)
61 3gdc_A Multicopper oxidase; be 56.9 3.9 0.00013 33.6 1.5 32 85-116 257-288 (288)
62 1sdd_A Coagulation factor V; c 53.7 1.8 6.3E-05 36.0 -1.1 77 40-117 216-301 (306)
63 1fft_B Ubiquinol oxidase; elec 52.7 13 0.00045 31.7 4.1 68 40-115 152-225 (315)
64 3cg8_A Laccase; oxidoreductase 52.6 13 0.00045 31.4 4.1 31 89-119 279-309 (343)
65 4i1k_A B3 domain-containing tr 51.8 4.2 0.00014 30.8 0.8 25 38-62 112-137 (146)
66 2zwn_A Two-domain type laccase 51.2 21 0.00073 29.8 5.2 78 42-119 38-129 (339)
67 1cyx_A CYOA; electron transpor 46.6 18 0.00061 29.1 3.8 67 41-115 43-115 (205)
68 1kbv_A ANIA, major outer membr 44.4 13 0.00043 31.1 2.7 34 85-118 275-309 (327)
69 1v54_B Cytochrome C oxidase po 44.0 18 0.00063 29.2 3.5 67 42-116 143-215 (227)
70 3g5w_A Multicopper oxidase typ 43.7 53 0.0018 27.2 6.5 79 40-118 35-127 (318)
71 2bw4_A Copper-containing nitri 43.0 21 0.00072 29.6 3.9 36 85-120 292-328 (340)
72 3iuw_A Activating signal coint 42.9 9.7 0.00033 26.5 1.4 15 41-55 36-51 (83)
73 1aoz_A Ascorbate oxidase; oxid 38.5 69 0.0024 28.5 6.8 77 40-118 35-125 (552)
74 3t6v_A Laccase; beta barrel, o 35.5 1.1E+02 0.0037 27.1 7.5 35 84-118 96-131 (495)
75 2uxt_A Protein SUFI, SUFI; oxi 35.2 35 0.0012 29.7 4.2 74 41-118 52-140 (451)
76 1zpu_A Iron transport multicop 34.6 68 0.0023 28.6 6.0 77 40-118 35-126 (534)
77 2zoo_A Probable nitrite reduct 33.8 24 0.00082 30.3 2.8 35 85-119 265-300 (442)
78 3sqr_A Laccase; multicopper ox 33.8 66 0.0022 29.4 5.9 34 84-117 155-188 (580)
79 1sdd_B Coagulation factor V; c 33.2 21 0.00071 32.6 2.4 33 85-117 296-328 (647)
80 3kw8_A Laccase, putative coppe 31.8 25 0.00085 28.5 2.5 31 90-120 239-269 (276)
81 3pxl_A Laccase; 4-copper prote 31.6 1.4E+02 0.0047 26.5 7.5 35 84-118 95-130 (499)
82 2k75_A Uncharacterized protein 30.8 20 0.00068 25.3 1.5 29 19-52 41-69 (106)
83 2xu9_A Laccase; oxidoreductase 30.0 62 0.0021 27.9 4.9 75 42-116 50-135 (439)
84 1sdd_A Coagulation factor V; c 30.0 64 0.0022 26.4 4.7 35 84-118 122-168 (306)
85 3tas_A Small laccase, multi-co 29.3 99 0.0034 25.4 5.8 29 90-118 114-148 (313)
86 2vb2_X Copper protein, cation 28.9 19 0.00065 24.9 1.1 22 35-56 54-75 (88)
87 2qcp_X Cation efflux system pr 28.8 19 0.00066 24.3 1.1 19 38-56 49-67 (80)
88 2r7e_B Coagulation factor VIII 28.1 32 0.0011 32.5 2.8 29 90-118 269-299 (770)
89 1xne_A Hypothetical protein PF 28.0 13 0.00046 27.1 0.2 12 41-52 33-44 (113)
90 2dv6_A Nitrite reductase; elec 27.3 40 0.0014 28.8 3.1 34 85-118 402-435 (447)
91 3t9w_A Small laccase, multi-co 26.5 26 0.00088 28.9 1.7 32 89-120 260-291 (299)
92 3tas_A Small laccase, multi-co 26.1 71 0.0024 26.2 4.4 31 90-120 245-275 (313)
93 1w0n_A Endo-1,4-beta-xylanase 24.9 1.4E+02 0.0048 22.3 5.3 63 45-120 42-119 (131)
94 1v10_A Laccase; multicopper bl 23.7 92 0.0031 27.6 4.9 77 42-118 58-151 (521)
95 3g5w_A Multicopper oxidase typ 23.4 60 0.0021 26.8 3.4 34 85-118 239-278 (318)
96 3aw5_A Multicopper oxidase; be 22.8 33 0.0011 29.9 1.8 76 40-119 39-129 (448)
97 2hzs_I RNA polymerase II media 21.9 0.79 2.7E-05 25.2 -5.6 17 40-56 4-20 (27)
98 2z0t_A Putative uncharacterize 21.8 30 0.001 25.0 1.1 11 41-51 32-42 (109)
99 3zx1_A Oxidoreductase, putativ 21.4 1E+02 0.0035 27.3 4.6 79 42-120 85-175 (481)
100 2dig_A Lamin-B receptor; tudor 20.5 78 0.0027 21.2 2.8 46 40-89 10-57 (68)
101 2l55_A SILB,silver efflux prot 20.3 44 0.0015 22.7 1.6 23 34-56 39-61 (82)
No 1
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=1.8e-43 Score=275.48 Aligned_cols=105 Identities=33% Similarity=0.681 Sum_probs=99.6
Q ss_pred cceEEEecCCCCCcCC---CCcccccCCCceEeCCEEEEEECCC-CeEEEe-CcccCCCCCCCCCCCCCCCCCcEEEe-c
Q 030594 16 YAVEYTVGDTSGWTQG---FDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRV-SESDYNNCASSNALESHDDGNTRINL-K 89 (175)
Q Consensus 16 ~a~~~~VGg~~GWt~~---~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V-~~~~Y~~C~~~~~~~~~s~G~~~v~l-~ 89 (175)
+|++|+|||+.||+++ .||++||++++|+|||+|+|+|..+ |+|+|| ++++|+.|+..+++..+++|+++|+| +
T Consensus 2 ~a~~~~VGg~~GW~~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~HsV~~V~~~~~y~~C~~s~p~~~~~~G~~~v~L~~ 81 (138)
T 1jer_A 2 QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDACNFVNSDNDVERTSPVIERLD 81 (138)
T ss_dssp CCCEEETTGGGCSSCCSSTTHHHHHHHTCCEETTCEEEECCCTTTCCCEEESCHHHHHHTCCTTSCCCCCCCSCEEEECC
T ss_pred CceEEEECCcCcCcCCCCccchhhhhcCCcCcCCCEEEEeecCCCceEEEeCchhhcCccCCCCccccccCCCeEEEecc
Confidence 5789999999999999 6899999999999999999999988 999999 99999999999999999999999999 9
Q ss_pred CCccEEEEcCCCCCCCCCCeEEEEeecCCCC
Q 030594 90 APGTQYFICPTAGHCPGGMKLAVTVVAASPP 120 (175)
Q Consensus 90 ~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 120 (175)
++|++||||++++||++||||+|+|.+..++
T Consensus 82 ~~G~~YFicg~~gHC~~GmKl~I~V~~~~~~ 112 (138)
T 1jer_A 82 ELGMHYFVCTVGTHCSNGQKLSINVVAANAT 112 (138)
T ss_dssp SSEEEEEECCSTTTGGGTCEEEEEEECCC--
T ss_pred CCcCEEEEcCCCCccccCCEEEEEEcCCCCC
Confidence 9999999999999999999999999988765
No 2
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=100.00 E-value=2.8e-41 Score=253.51 Aligned_cols=104 Identities=41% Similarity=0.791 Sum_probs=97.7
Q ss_pred cceEEEecCCCCCcCC--CCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCc
Q 030594 16 YAVEYTVGDTSGWTQG--FDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPG 92 (175)
Q Consensus 16 ~a~~~~VGg~~GWt~~--~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G 92 (175)
+|++|+|||+.||+++ .||++||++++|++||+|+|+|.++ |+|+||++++|++|+.++++..+++|+++|+|+++|
T Consensus 1 ~a~~~~VG~~~GW~~~~~~~Y~~Wa~~~~F~vGD~LvF~y~~~~hsV~~V~~~~y~~C~~~~p~~~~~~G~~~v~L~~~G 80 (109)
T 1ws8_A 1 MATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPG 80 (109)
T ss_dssp CCCEEETTGGGCSCSSSCCCHHHHHHTSCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCSSCSEEECSSEEEEECCSSE
T ss_pred CCcEEEeCCCCCccCCCCcChhHhhcCCcCcCCCEEEEeecCCCceEEEEChHHCCcccCCCcccccCCCCEEEEECCCc
Confidence 4789999999999998 7999999999999999999999999 999999999999999999999999999999999999
Q ss_pred cEEEEcCCCCCCCCCCeEEEEeecCCC
Q 030594 93 TQYFICPTAGHCPGGMKLAVTVVAASP 119 (175)
Q Consensus 93 ~~YFiC~v~~HC~~GmKl~I~V~~~~~ 119 (175)
++||||++++||++||||+|+|.+.++
T Consensus 81 ~~yFic~~~gHC~~GmKl~I~V~~~~s 107 (109)
T 1ws8_A 81 TFYFLCGIPGHCQLGQKVEIKVDPGSS 107 (109)
T ss_dssp EEEEECCSTTTTTTTCEEEEEECC---
T ss_pred CEEEECCCCCcccCCCEEEEEEcCCCC
Confidence 999999999999999999999987654
No 3
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=100.00 E-value=2.2e-40 Score=251.17 Aligned_cols=103 Identities=34% Similarity=0.698 Sum_probs=94.7
Q ss_pred eEEEecCCCCCcCC---CCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCcc
Q 030594 18 VEYTVGDTSGWTQG---FDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGT 93 (175)
Q Consensus 18 ~~~~VGg~~GWt~~---~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~ 93 (175)
++|+|||+.||+++ .||++||++++|++||+|+|+|.++ |+|+||++++|+.|+..+++..+++|+++|+|+++|+
T Consensus 2 ~~~~VG~~~GW~~~~~~~~Y~~Wa~~~~f~vGD~L~F~y~~~~HsV~~V~~~~y~~C~~~~~~~~~~~G~~~v~l~~~G~ 81 (116)
T 1x9u_A 2 EDYDVGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPISHMTTPPVKIMLNTTGP 81 (116)
T ss_dssp CEEETTGGGCSSCCSSTTHHHHHHTTCCEETTCEEEECCCTTTCCEEEECHHHHHTTCCSSCSEEECSSSEEEECCSCEE
T ss_pred eEEEECCcCcCcCCCCCcchhhccccccCcCCCEEEEEecCCCCeEEEEChhhcCccCCCCCccccCCCCeEEEECCCCC
Confidence 57999999999986 5799999999999999999999988 9999999999999999999989999999999999999
Q ss_pred EEEEcCCCCCCCCCCeEEE-EeecCCCC
Q 030594 94 QYFICPTAGHCPGGMKLAV-TVVAASPP 120 (175)
Q Consensus 94 ~YFiC~v~~HC~~GmKl~I-~V~~~~~~ 120 (175)
+||||++++||++||||+| +|.+.+++
T Consensus 82 ~yFic~~~~HC~~Gmkl~In~V~~~~~~ 109 (116)
T 1x9u_A 82 QYYICTVGDHCRVGQKLSINVVGAGGAG 109 (116)
T ss_dssp EEEECCSTTTTTTTCEEEEEEECC----
T ss_pred EEEECCCCCccccCCEEEEEEECCCCCC
Confidence 9999999999999999999 88766544
No 4
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=100.00 E-value=7.5e-39 Score=235.25 Aligned_cols=95 Identities=39% Similarity=0.835 Sum_probs=91.3
Q ss_pred eEEEecCCCCCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEE
Q 030594 18 VEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYF 96 (175)
Q Consensus 18 ~~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YF 96 (175)
++|+|||+.||++ +|++||++++|++||+|+|+|.++ |+|+||++++|++|+.++++..+++|+++|+| ++|++||
T Consensus 1 ~~~~VG~~~GW~~--~y~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L-~~g~~yF 77 (96)
T 2cbp_A 1 AVYVVGGSGGWTF--NTESWPKGKRFRAGDILLFNYNPSMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKL-PKGQSYF 77 (96)
T ss_dssp CEEETTGGGCSCS--SCTTTTTTCCBCTTCEEEEECCTTTCCEEEECHHHHHHTCCCTTCEEECSSEEEEEC-CSEEEEE
T ss_pred CEEEECCcCCCcc--ChhhhccCceEcCCCEEEEEecCCCCEEEEECHHHCCccCCCCCcccccCCCeEEEe-cCCCEEE
Confidence 4799999999997 699999999999999999999998 99999999999999999999899999999999 8999999
Q ss_pred EcCCCCCCCCCCeEEEEee
Q 030594 97 ICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 97 iC~v~~HC~~GmKl~I~V~ 115 (175)
||++++||++||||+|+|+
T Consensus 78 ic~~~~HC~~Gmkl~I~Vl 96 (96)
T 2cbp_A 78 ICNFPGHCQSGMKIAVNAL 96 (96)
T ss_dssp ECCSTTTGGGTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 9999999999999999995
No 5
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=100.00 E-value=1.4e-34 Score=210.72 Aligned_cols=90 Identities=39% Similarity=0.795 Sum_probs=85.5
Q ss_pred eEEEecCCCCCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEE
Q 030594 18 VEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYF 96 (175)
Q Consensus 18 ~~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YF 96 (175)
++|+| ||+++ ++||++++|++||+|+|+|.++ |+|+||++++|++|+.++++..+++|+++|+|+ +|++||
T Consensus 1 ~~y~V----gW~~~---~~Wa~~~~f~vGD~L~F~y~~~~hsV~~v~~~~y~~C~~~~~~~~~~~G~~~v~L~-~g~~yF 72 (91)
T 1f56_A 1 AVYNI----GWSFN---VNGARGKSFRAGDVLVFKYIKGQHNVVAVNGRGYASCSAPRGARTYSSGQDRIKLT-RGQNYF 72 (91)
T ss_dssp CEEEE----ECSSS---CBSCTTCCBCTTCEEEEECCBTTBCEEEECHHHHHTTCCCTTCEEECSSEEEEECC-SEEEEE
T ss_pred CEEEE----eCCCC---CcCcCCccEeCCCEEEEEccCCCCeEEEECHHHcCCcCCCCCcccccCCCcEEEeC-CCCeEE
Confidence 46889 89987 8999999999999999999988 999999999999999999998999999999996 899999
Q ss_pred EcCCCCCCCCCCeEEEEee
Q 030594 97 ICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 97 iC~v~~HC~~GmKl~I~V~ 115 (175)
||++++||++||||+|+|.
T Consensus 73 ic~~~~HC~~Gmkl~I~v~ 91 (91)
T 1f56_A 73 ICSFPGHCGGGMKIAINAK 91 (91)
T ss_dssp ECCSTTTTTTTCEEEEEEC
T ss_pred EcCCCCccccCCEEEEEEC
Confidence 9999999999999999984
No 6
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=99.31 E-value=5.4e-12 Score=95.78 Aligned_cols=95 Identities=22% Similarity=0.337 Sum_probs=66.2
Q ss_pred ccceEEEecCC-CCCcCCCCcccccCCCceEeCCEEEEEECC-----C-CeEEEeCcc-cCCC--------------C--
Q 030594 15 VYAVEYTVGDT-SGWTQGFDYTSWVSGKTFKVGDVLVFNYGG-----L-HKVDRVSES-DYNN--------------C-- 70 (175)
Q Consensus 15 a~a~~~~VGg~-~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~-----~-HsV~~V~~~-~Y~~--------------C-- 70 (175)
+...++.|+-. .+|.+.+ +..+++.||+++|.|.+ . |+++..+.. ++.. .
T Consensus 14 ~~~~~v~V~~~~~~~~F~P------~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (140)
T 1qhq_A 14 TPAQTVEVRAAPDALAFAQ------TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPP 87 (140)
T ss_dssp CCSEEEEEEBCSSSSSBSC------SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCC
T ss_pred CCCEEEEEEEeCCCceEeC------CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCc
Confidence 44567777753 4588876 36799999999999866 3 999887421 1111 0
Q ss_pred -CCC------CCCCCCCCCCcEEEecCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 71 -ASS------NALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 71 -~~~------~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+.. ..+....++..+|+++++|.|||+|++.+||..|||..|+|.
T Consensus 88 ~~~~~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 88 PDTPNALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TTCTTEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccccccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 000 011122233456788899999999999999999999999996
No 7
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=99.21 E-value=1.7e-11 Score=85.62 Aligned_cols=84 Identities=17% Similarity=0.227 Sum_probs=61.5
Q ss_pred EEEecCC-CCCcCCCCcccccCCCceEeCCEEEEEECC-C-CeEEEeCcccCCCCCCCCCCCCCCCC-CcEEEecCCccE
Q 030594 19 EYTVGDT-SGWTQGFDYTSWVSGKTFKVGDVLVFNYGG-L-HKVDRVSESDYNNCASSNALESHDDG-NTRINLKAPGTQ 94 (175)
Q Consensus 19 ~~~VGg~-~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~-~-HsV~~V~~~~Y~~C~~~~~~~~~s~G-~~~v~l~~~G~~ 94 (175)
++.+|++ .+|.+.++ ..++++||+|+|.+.. . |+|.......+. ........| ...++++++|.|
T Consensus 4 ~v~~~~~~~~~~f~P~------~i~v~~Gd~V~~~n~~~~~H~v~~~~~~~~~-----~~~~~~~~g~~~~~~f~~~G~y 72 (91)
T 1bxv_A 4 AIKMGADNGMLAFEPS------TIEIQAGDTVQWVNNKLAPHNVVVEGQPELS-----HKDLAFSPGETFEATFSEPGTY 72 (91)
T ss_dssp EEEESCTTSCSSEESS------EEEECTTCEEEEEECSSCCEEEEETTCGGGC-----EEEEECSTTCEEEEECCSCEEE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCcEEEEeCCCccC-----cccceeCCCCEEEEEeCCCEEE
Confidence 4567754 56888763 6789999999999986 4 999876532221 011122333 467889999999
Q ss_pred EEEcCCCCCCCCCCeEEEEee
Q 030594 95 YFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 95 YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+|+|. .||..||+..|+|.
T Consensus 73 ~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 73 TYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp EEECT--TTGGGTCEEEEEEC
T ss_pred EEEeC--CCccCCCEEEEEEC
Confidence 99999 89999999999984
No 8
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.10 E-value=6.7e-11 Score=92.35 Aligned_cols=75 Identities=20% Similarity=0.304 Sum_probs=57.5
Q ss_pred CCceEeCCEEEEEECC---C--CeEEEe-CcccCCCCCCCCCCC-------CCCCC---Cc--EEEecCCccEEEEcCCC
Q 030594 40 GKTFKVGDVLVFNYGG---L--HKVDRV-SESDYNNCASSNALE-------SHDDG---NT--RINLKAPGTQYFICPTA 101 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~---~--HsV~~V-~~~~Y~~C~~~~~~~-------~~s~G---~~--~v~l~~~G~~YFiC~v~ 101 (175)
..++++||+|+|++.+ . |++..+ ....|+.|.....+. ....| .. +|++ ++|.|||+|.++
T Consensus 62 ~i~V~~GD~V~~~~tN~~~~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~pGtY~y~C~~~ 140 (154)
T 2cal_A 62 TLEIPAGATVDVTFINTNKGFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-TAGTYYYVCQIP 140 (154)
T ss_dssp EEEECTTCEEEEEEEECCTTCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-CSEEEEEECCST
T ss_pred EEEEeCCCEEEEEEEcCCCCeeeEEEEeecCcchhccccccccccccccccccCCCCceEEEEEEEE-CCceEEEECCCC
Confidence 4688999999999964 2 999998 456777787654321 11222 23 5677 999999999999
Q ss_pred CCCCCCCeEEEEee
Q 030594 102 GHCPGGMKLAVTVV 115 (175)
Q Consensus 102 ~HC~~GmKl~I~V~ 115 (175)
+||+.|||..|+|.
T Consensus 141 gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 141 GMAATGMFGKIVVK 154 (154)
T ss_dssp TTGGGTCEEEEEEC
T ss_pred CHHHCCCEEEEEEC
Confidence 99999999999984
No 9
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.96 E-value=1.9e-09 Score=81.35 Aligned_cols=82 Identities=22% Similarity=0.204 Sum_probs=59.3
Q ss_pred cCCCCCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCC-CCCCCC-CcEEEecCCccEEEEcC
Q 030594 23 GDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNAL-ESHDDG-NTRINLKAPGTQYFICP 99 (175)
Q Consensus 23 Gg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~-~~~s~G-~~~v~l~~~G~~YFiC~ 99 (175)
|++.++.+.++ ..++++||+|+|.+... |+|+... .|...+.. .....| ...++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~n~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~ 79 (123)
T 1pmy_A 11 GPGGMMVFDPA------LVRLKPGDSIKFLPTDKGHNVETIK-----GMAPDGADYVKTTVGQEAVVKFDKEGVYGFKCA 79 (123)
T ss_dssp ETTEEEEEESS------EEEECTTCEEEEECSSSSCCCEECT-----TSSCTTCCCCBCCTTSCEEEECCSCEEEEEECS
T ss_pred cCCCCceEeCC------EEEECCCCEEEEEECCCCcEEEEec-----ccCCCCccceecCCCCEEEEEeCCCeEEEEEeC
Confidence 54445777663 67899999999999887 9998752 22222111 011122 35789999999999998
Q ss_pred CCCCCCCCCeEEEEeecC
Q 030594 100 TAGHCPGGMKLAVTVVAA 117 (175)
Q Consensus 100 v~~HC~~GmKl~I~V~~~ 117 (175)
.||..||+..|+|.+.
T Consensus 80 --~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 80 --PHYMMGMVALVVVGDK 95 (123)
T ss_dssp --TTTTTTCEEEEEESSC
T ss_pred --CccccCCEEEEEEcCC
Confidence 5999999999999854
No 10
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.96 E-value=3.2e-09 Score=76.16 Aligned_cols=87 Identities=22% Similarity=0.224 Sum_probs=60.5
Q ss_pred EEEecCC-CCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccCC-----C--CCCCCCCCCCCCC-CcEEE
Q 030594 19 EYTVGDT-SGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDYN-----N--CASSNALESHDDG-NTRIN 87 (175)
Q Consensus 19 ~~~VGg~-~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y~-----~--C~~~~~~~~~s~G-~~~v~ 87 (175)
++.+|.+ .++.+.++ ..++++||+|+|.+... |++...+....+ . +.. ... ....| ...++
T Consensus 5 ~V~~~~~~~~~~F~P~------~i~v~~Gd~V~~~n~~~~~H~~~~~~~~~~~~~g~~~~~~~~-~~~-~~~pG~~~~~~ 76 (106)
T 2gim_A 5 TVKLGSDKGLLVFEPA------KLTIKPGDTVEFLNNKVPPHNVVFDAALNPAKSADLAKSLSH-KQL-LMSPGQSTSTT 76 (106)
T ss_dssp EEEESCTTCCSSEESS------EEEECTTCEEEEEECSSSCCCBEECSSSSTTCCHHHHHHHCB-CSC-CCSTTCEEEEE
T ss_pred EEEEEecCCcceEcCC------EEEECCCCEEEEEECCCCCceEEEeCCCCcccccccchhccc-cce-eeCCCCEEEEE
Confidence 4567643 57888763 67899999999998864 999865322110 0 000 111 12233 35778
Q ss_pred e---cCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 88 L---KAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 88 l---~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+ +++|.|+|+|. .||+.||+..|+|.
T Consensus 77 f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 77 FPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 8 89999999999 89999999999985
No 11
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.94 E-value=2e-09 Score=81.16 Aligned_cols=82 Identities=18% Similarity=0.216 Sum_probs=58.9
Q ss_pred cCCCCCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCCC-CCCCC-CcEEEecCCccEEEEcC
Q 030594 23 GDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNALE-SHDDG-NTRINLKAPGTQYFICP 99 (175)
Q Consensus 23 Gg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~~-~~s~G-~~~v~l~~~G~~YFiC~ 99 (175)
|++.++.+.++ ..++++||+|+|.+... |+|+... .|...+... ....| ...++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~~~~~~H~v~~~~-----~~~p~~~~~~~~~pG~t~~~tF~~~G~y~y~C~ 79 (123)
T 1paz_A 11 GAEGAMVFEPA------YIKANPGDTVTFIPVDKGHNVESIK-----DMIPEGAEKFKSKINENYVLTVTQPGAYLVKCT 79 (123)
T ss_dssp ETTEEEEEESS------EEEECTTCEEEEEESSSSCCCEECT-----TCSCTTCCCCBCCTTCCEEEECCSCEEEEEECT
T ss_pred cCCCCceEeCC------EEEECCCCEEEEEECCCCeEEEEec-----ccCCCCccceecCCCCEEEEEeCCCEEEEEEeC
Confidence 54445777663 67899999999999887 9998741 222221110 01122 35789999999999998
Q ss_pred CCCCCCCCCeEEEEeecC
Q 030594 100 TAGHCPGGMKLAVTVVAA 117 (175)
Q Consensus 100 v~~HC~~GmKl~I~V~~~ 117 (175)
.||..||+..|+|.+.
T Consensus 80 --~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 80 --PHYAMGMIALIAVGDS 95 (123)
T ss_dssp --TTGGGTCEEEEEESSS
T ss_pred --CcccCCCEEEEEEcCC
Confidence 5999999999999753
No 12
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.92 E-value=1.4e-09 Score=77.67 Aligned_cols=90 Identities=19% Similarity=0.217 Sum_probs=61.3
Q ss_pred eEEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcc---cCCCCCCCCCCCCCCCCC-cEEEecC
Q 030594 18 VEYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSES---DYNNCASSNALESHDDGN-TRINLKA 90 (175)
Q Consensus 18 ~~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~---~Y~~C~~~~~~~~~s~G~-~~v~l~~ 90 (175)
.++.+|+ +.++.+.++ ..++++||+|+|.+... |+|+..+.. .++.+...........|. ..+++++
T Consensus 2 ~~V~m~~~~~~~~F~P~------~i~v~~GdtV~~~n~~~~~H~v~~~~~~~p~g~~~~~~~~~~~~~~~g~~~~~tf~~ 75 (98)
T 1iuz_A 2 QIVKLGGDDGSLAFVPS------KISVAAGEAIEFVNNAGFPHNIVFDEDAVPAGVDADAISYDDYLNSKGETVVRKLST 75 (98)
T ss_dssp EEEEESCTTSCCSEESS------EEEECTTCEEEEEECSSCCEEEEECTTSSCTTCCHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEEecCCCCcEEeCC------EEEECCCCEEEEEECCCCCEEEEEeCCCCccccccccccccccccCCCCEEEEEcCC
Confidence 4555664 456888763 67899999999998875 999876321 122111110001223343 4788999
Q ss_pred CccEEEEcCCCCCCCCCCeEEEEee
Q 030594 91 PGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 91 ~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+|.|+|+|.. ||..||+..|.|.
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999985 9999999999984
No 13
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.92 E-value=4.2e-09 Score=74.91 Aligned_cols=89 Identities=20% Similarity=0.221 Sum_probs=60.8
Q ss_pred EEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcc---cCCCCCCC--CCCCCCCCC-CcEEEec
Q 030594 19 EYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSES---DYNNCASS--NALESHDDG-NTRINLK 89 (175)
Q Consensus 19 ~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~---~Y~~C~~~--~~~~~~s~G-~~~v~l~ 89 (175)
++.+|+ +.++.+.++ ..++++||+|+|++... |+|+..+.. ..+.+... ........| ...++++
T Consensus 2 ~v~m~~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~v~~~~~~~p~~~~~~~~~~~~~~~~~~~G~~~~~tf~ 75 (99)
T 1plc_A 2 DVLLGADDGSLAFVPS------EFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVDASKISMSEEDLLNAKGETFEVALS 75 (99)
T ss_dssp EEEESCTTCCSCEESS------EEEECTTCEEEEEECSSCCBCCEECTTSSCTTCCHHHHCCCTTCCBCSTTCEEEEECC
T ss_pred EEEEecCCCcceEeCC------EEEECCCCEEEEEECCCCceEEEEeCCCCcccccccccccccCccccCCCCEEEEEEC
Confidence 456665 345777663 67899999999998875 999876431 11111100 000112333 3578999
Q ss_pred CCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 90 APGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 90 ~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
++|.|+|+|. .||+.||+..|+|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 89999999999984
No 14
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.86 E-value=1.7e-08 Score=76.39 Aligned_cols=94 Identities=20% Similarity=0.286 Sum_probs=63.8
Q ss_pred ccceEEEec-CCCCCcCCCCcccccCCCceEeCCEEEEEECC-----CCeEEEeCcc------------------cCCCC
Q 030594 15 VYAVEYTVG-DTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGG-----LHKVDRVSES------------------DYNNC 70 (175)
Q Consensus 15 a~a~~~~VG-g~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~-----~HsV~~V~~~------------------~Y~~C 70 (175)
+...++.|| ...++.+.++ ..+++.||+++|+|.+ .|+++..... +|..|
T Consensus 16 ~~~~~V~v~~~~~~~~F~p~------~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~ 89 (139)
T 2aan_A 16 SGPVTIEIGSKGEELAFDKT------ELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA 89 (139)
T ss_dssp -CCEEEEEEBCTTSSSBSCS------EEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS
T ss_pred CcCEEEEEEecCCccEEcCC------eEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCc
Confidence 344566774 2346777763 6789999999988853 4998887432 56666
Q ss_pred CCCCCC---CCCCCCC-cE--EEecCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 71 ASSNAL---ESHDDGN-TR--INLKAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 71 ~~~~~~---~~~s~G~-~~--v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
...+.+ .....|. .. |+++++|.|+|+|.+..||. ||+-.|+|.
T Consensus 90 ~~~~~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 90 DKSNIIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CCTTEEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred ccccccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 533211 1123342 34 44458999999999999999 999999884
No 15
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.85 E-value=5.8e-09 Score=74.42 Aligned_cols=88 Identities=25% Similarity=0.326 Sum_probs=60.8
Q ss_pred EEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccCC----CCCCC-----CCCCCCCCC-CcE
Q 030594 19 EYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDYN----NCASS-----NALESHDDG-NTR 85 (175)
Q Consensus 19 ~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y~----~C~~~-----~~~~~~s~G-~~~ 85 (175)
++.+|. +.++.+.++ ..++++||+++|.+... |+++....+..+ .|... ... ....| ...
T Consensus 2 ~V~~g~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pG~~~~ 74 (102)
T 1kdj_A 2 KVEVGDEVGNFKFYPD------SITVSAGEAVEFTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDL-LSEDEPSFK 74 (102)
T ss_dssp EEEESCTTCCCCEESS------EEEECTTCCEEEEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCC-BBTTBCEEE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCeEEEEeCcccccccccchhhcccccccce-ecCCCCEEE
Confidence 456775 356777663 67899999999998874 999876322221 01000 111 12333 357
Q ss_pred EEecCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 86 INLKAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 86 v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
++++++|.|+|+|. .||+.||+..|+|.
T Consensus 75 ~tf~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 75 AKVSTPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp ECCCSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred EEeCCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 88899999999999 99999999999984
No 16
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.84 E-value=4.2e-09 Score=79.63 Aligned_cols=79 Identities=22% Similarity=0.203 Sum_probs=58.4
Q ss_pred CCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCC--CCCCCCCCcEEEecCCccEEEEcCCCCC
Q 030594 27 GWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNA--LESHDDGNTRINLKAPGTQYFICPTAGH 103 (175)
Q Consensus 27 GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~--~~~~s~G~~~v~l~~~G~~YFiC~v~~H 103 (175)
...+.+ +..++++||+|+|.+.+. |+|+..+. +...+. ...-......++++++|.|+|+|. .|
T Consensus 15 ~~~F~P------~~i~V~~GdtV~f~~~~~~H~v~~~~~-----~~P~g~~~f~~~pg~t~s~TF~~pG~y~y~C~--~H 81 (123)
T 3erx_A 15 AMVFEP------AFVRAEPGDVINFVPTDKSHNVEAIKE-----ILPEGVESFKSKINESYTLTVTEPGLYGVKCT--PH 81 (123)
T ss_dssp EEEEES------SEEEECTTEEEEEEESSTTCCCEECTT-----SSCTTCCCCBCCTTCCEEEEECSCEEEEEECG--GG
T ss_pred cEeEeC------CEEEECCCCEEEEEECCCCceEEEcCC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEeC--CC
Confidence 377766 377999999999999887 99987532 222211 111112346889999999999999 79
Q ss_pred CCCCCeEEEEeecCC
Q 030594 104 CPGGMKLAVTVVAAS 118 (175)
Q Consensus 104 C~~GmKl~I~V~~~~ 118 (175)
|..||+-.|+|...+
T Consensus 82 ~~~GM~G~I~V~~~~ 96 (123)
T 3erx_A 82 FGMGMVGLVQVGDAP 96 (123)
T ss_dssp TTTTCEEEEEESSSC
T ss_pred CcCCcEEEEEECCCC
Confidence 999999999998633
No 17
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.84 E-value=9.5e-09 Score=72.65 Aligned_cols=88 Identities=20% Similarity=0.228 Sum_probs=60.3
Q ss_pred EEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCccc---CCCCCCCCCCCCCCCCCcEEEecCCc
Q 030594 19 EYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESD---YNNCASSNALESHDDGNTRINLKAPG 92 (175)
Q Consensus 19 ~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~---Y~~C~~~~~~~~~s~G~~~v~l~~~G 92 (175)
+..+|+ +.++.+.++ ..++++||+|+|.+... |++...+... .+.+.... ..........++++++|
T Consensus 4 ~V~~~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~tf~~~G 76 (97)
T 1b3i_A 4 QIKMGTDKYAPLYEPK------ALSISAGDTVEFVMNKVGPHNVIFDKVPAGESAPALSNTK-LAIAPGSFYSVTLGTPG 76 (97)
T ss_dssp EEEEEETTTEEEEESS------EEEECTTCEEEEEECSSCCCCBEEEECCTTSCHHHHCBCC-CCCSCSCCEEEECCSCS
T ss_pred EEEEeccCCccEEeCC------EEEECCCCEEEEEECCCCCeEEEEeCCCCccccccccccc-eecCCCCEEEEEeCCCe
Confidence 455664 356777663 67899999999998874 9998764321 00011111 11112234678899999
Q ss_pred cEEEEcCCCCCCCCCCeEEEEee
Q 030594 93 TQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 93 ~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.|+|+|. .||+.||+..|+|.
T Consensus 77 ~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 77 TYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp EEEEECS--STTTTTCEEEEEEC
T ss_pred EEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999 89999999999984
No 18
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.81 E-value=1.4e-08 Score=72.06 Aligned_cols=89 Identities=21% Similarity=0.217 Sum_probs=60.9
Q ss_pred EEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcc---cCCCCCCC--CCCCCCCCC-CcEEEec
Q 030594 19 EYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSES---DYNNCASS--NALESHDDG-NTRINLK 89 (175)
Q Consensus 19 ~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~---~Y~~C~~~--~~~~~~s~G-~~~v~l~ 89 (175)
++.+|+ +.++.+.++ ..++++||+|+|++... |++...+.. .++.+... ........| ...++++
T Consensus 2 ~V~~~~~~~~~~F~P~------~i~v~~G~tV~~~n~~~~~H~~~~~~~~~p~g~~~~~~~~~~~~~~~~~G~~~~~~f~ 75 (99)
T 1byp_A 2 EVLLGSSDGGLAFVPS------DLSIASGEKITFKNNAGFPHNDLFDKKEVPAGVDVTKISMPEEDLLNAPGEEYSVTLT 75 (99)
T ss_dssp EEEESCTTSCCSEESS------EEEECTTEEEEEEECSSCCBCCEECTTSSCTTCCHHHHSCCTTCCBCSTTCEEEEEEC
T ss_pred EEEEecCCCcceEeCC------EEEECCCCEEEEEECCCCcceEEEeCCCCccccccccccccccceeeCCCCEEEEEeC
Confidence 456664 456777663 57899999999998875 999876421 12222110 000112333 3578899
Q ss_pred CCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 90 APGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 90 ~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
++|.|.|+|. .||+.||+..|+|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 89999999999984
No 19
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.81 E-value=7.8e-09 Score=78.60 Aligned_cols=83 Identities=18% Similarity=0.180 Sum_probs=60.4
Q ss_pred cCCC-CCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCC--CCCCCCCcEEEecCCccEEEEc
Q 030594 23 GDTS-GWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNAL--ESHDDGNTRINLKAPGTQYFIC 98 (175)
Q Consensus 23 Gg~~-GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~--~~~s~G~~~v~l~~~G~~YFiC 98 (175)
|.+. +..+.++ ..++++||+|.|.+.+. |+|+..+. +...... ..-......++++++|.|+|+|
T Consensus 12 g~~g~~~~F~P~------~i~V~~GDtVtf~n~~~~H~v~~~~~-----~~P~g~~~f~s~pGet~s~TF~~pG~y~y~C 80 (127)
T 3tu6_A 12 AADGRVMAFEPA------VIRAQPGDTVTFVAKDKGHNSALMKG-----GAPEGAETWKGKINEEITVTLSKPGVYMYQC 80 (127)
T ss_dssp CTTSCEEEEESS------EEEECTTCEEEEECSSSSCCCEECTT-----CSCTTCCCCBCCTTCCCEEECCSCEEEEEEC
T ss_pred CCCCcccEEeCC------EEEECCCCEEEEEECCCCceEEEccC-----cCCCCccceecCCCCEEEEEeCCCeEEEEEe
Confidence 5443 4777763 77999999999999987 99987532 1111111 0111223689999999999999
Q ss_pred CCCCCCCCCCeEEEEeecCC
Q 030594 99 PTAGHCPGGMKLAVTVVAAS 118 (175)
Q Consensus 99 ~v~~HC~~GmKl~I~V~~~~ 118 (175)
. .||..||+-.|+|.+.+
T Consensus 81 ~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 81 A--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp T--TTGGGTCEEEEEESSCT
T ss_pred C--CCCcCCcEEEEEECcCC
Confidence 9 69999999999998654
No 20
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.75 E-value=2.4e-08 Score=75.78 Aligned_cols=81 Identities=20% Similarity=0.173 Sum_probs=60.3
Q ss_pred cCCCC--CcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCC-CCCCCC-CcEEEecCCccEEEE
Q 030594 23 GDTSG--WTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNAL-ESHDDG-NTRINLKAPGTQYFI 97 (175)
Q Consensus 23 Gg~~G--Wt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~-~~~s~G-~~~v~l~~~G~~YFi 97 (175)
+|++| +.+.|+ ..++++||+|.|.+... |+|+..+. +...+.. .....| ...++++++|.|.|+
T Consensus 10 ~g~~G~~~~F~P~------~i~V~~GDTV~f~n~~~~Hnv~~~~~-----~~p~g~~~~~~~pg~t~s~TF~~~G~y~Y~ 78 (124)
T 3ef4_A 10 KDDAGNTMVFQPG------FVKVEAGDTVKFVPTDKSHNAESVRE-----VWPEGVAPVKGGFSKEVVFNAEKEGLYVLK 78 (124)
T ss_dssp ECTTSCEEEEESS------EEEECTTCEEEEECSSSSCCCEECTT-----TSCTTSCCCBCCTTCCEEEECCSSEEEEEE
T ss_pred cCCCCceeEEeCC------EEEECCCCEEEEEECCCCccEEEeCC-----cCCCCccccccCCCCEEEEEeCCCeEEEEE
Confidence 44455 888773 78999999999999887 99987532 2222211 011222 368899999999999
Q ss_pred cCCCCCCCCCCeEEEEeec
Q 030594 98 CPTAGHCPGGMKLAVTVVA 116 (175)
Q Consensus 98 C~v~~HC~~GmKl~I~V~~ 116 (175)
|. .||..||+-.|+|..
T Consensus 79 C~--~H~~~GM~G~I~V~~ 95 (124)
T 3ef4_A 79 CA--PHYGMGMVVLVQVGK 95 (124)
T ss_dssp CT--TTGGGTCEEEEEESS
T ss_pred cC--CCCcCCCEEEEEECC
Confidence 97 799999999999986
No 21
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.74 E-value=1.8e-08 Score=71.25 Aligned_cols=90 Identities=20% Similarity=0.190 Sum_probs=60.9
Q ss_pred eEEEecC-CCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcc---cCCCCCCCCCCCCCCCC-CcEEEecC
Q 030594 18 VEYTVGD-TSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSES---DYNNCASSNALESHDDG-NTRINLKA 90 (175)
Q Consensus 18 ~~~~VGg-~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~---~Y~~C~~~~~~~~~s~G-~~~v~l~~ 90 (175)
.++.+|+ +.++.+.++ ..++++||+|+|.+... |++...+.. +++.+...........| ...+++++
T Consensus 2 ~~V~m~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p~~~~~~~~~~~~~~~~pG~~~~~tf~~ 75 (98)
T 2plt_A 2 ATVKLGADSGALEFVPK------TLTIKSGETVNFVNNAGFPHNIVFDEDAIPSGVNADAISRDDYLNAPGETYSVKLTA 75 (98)
T ss_dssp EEEEESCTTCCSSEESS------EEEECTTCEEEEEECSSCCEEEEECGGGSCTTCCHHHHCEEEEECSTTCEEEEECCS
T ss_pred EEEEEecCCCCceEeCC------EEEECCCCEEEEEECCCCceEEEEeCCCCCCccccccccccceecCCCCEEEEEeCC
Confidence 4566764 346777763 57899999999998875 999876321 11111000000112333 34788999
Q ss_pred CccEEEEcCCCCCCCCCCeEEEEee
Q 030594 91 PGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 91 ~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+|.|+|+|. .||+.||+..|+|.
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999984
No 22
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.67 E-value=5e-08 Score=68.98 Aligned_cols=89 Identities=19% Similarity=0.193 Sum_probs=59.4
Q ss_pred EEEecCC-CCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccC--CCCCCCCCCCCCCCC-CcEEEecCCc
Q 030594 19 EYTVGDT-SGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDY--NNCASSNALESHDDG-NTRINLKAPG 92 (175)
Q Consensus 19 ~~~VGg~-~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y--~~C~~~~~~~~~s~G-~~~v~l~~~G 92 (175)
++.+|.+ .++.+.++ ..++++||+++|.+... |++...+...- +.............| ...++++++|
T Consensus 4 ~V~~~~~~~~~~F~P~------~i~v~~G~~V~~~n~~~~~H~~~~~~~~~pg~~~~~~~~~~~~~~pG~~~~~tf~~~G 77 (98)
T 1pcs_A 4 TVKMGSDSGALVFEPS------TVTIKAGEEVKWVNNKLSPHNIVFDADGVPADTAAKLSHKGLLFAAGESFTSTFTEPG 77 (98)
T ss_dssp EEEESCTTSCSSEESS------EEEECTTCEEEEEECSSCCEEEEECCSSSCHHHHHHHCEEEEECSTTCEEEEECCSCE
T ss_pred EEEEecCCCccEEeCC------EEEECCCCEEEEEECCCCCcEEEEeCCCCCccccccccccccccCCCCEEEEEcCCCe
Confidence 4566643 56777763 57899999999998764 99987532100 000000000112223 3577889999
Q ss_pred cEEEEcCCCCCCCCCCeEEEEee
Q 030594 93 TQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 93 ~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.|+|+|. .||..||+..|+|.
T Consensus 78 ~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 78 TYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp EEEEECG--GGTTTTCEEEEEEC
T ss_pred EEEEEcC--CccccCCeEEEEEC
Confidence 9999999 79999999999984
No 23
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.29 E-value=1.7e-06 Score=61.37 Aligned_cols=87 Identities=22% Similarity=0.222 Sum_probs=58.0
Q ss_pred EEEecCC-CCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccCCCCCC-------CCCCCCCCCC-CcEEE
Q 030594 19 EYTVGDT-SGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDYNNCAS-------SNALESHDDG-NTRIN 87 (175)
Q Consensus 19 ~~~VGg~-~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y~~C~~-------~~~~~~~s~G-~~~v~ 87 (175)
++.+|.+ .+..+.++ ..+++.||+|+|..... |++..-... ..+.. .........| ...++
T Consensus 4 ~V~~~~~~~~~~f~p~------~i~v~~Gd~V~~~N~~~~~H~v~~~~~~--~~~~~g~~~~~~~~~~~~i~pG~~~~~~ 75 (105)
T 3cvb_A 4 TVKMGADSGLFQFEPA------NVTVHPGDTVKWVNNKLPPHNILFDDKQ--VPGASKELADKLSHSQLMFSPGESYEIT 75 (105)
T ss_dssp EEEESCTTCCSCEESS------EEEECTTEEEEEEECSSCCEEEEECTTS--SGGGCHHHHHHHCEEEEECSTTCEEEEE
T ss_pred EEEEeecCCccEEeCC------EEEEcCCCEEEEEECCCCCCeEEEeCCC--CCcccccccccccccccccCCCCeEEEE
Confidence 4567643 56777653 57899999999988754 998775321 11200 0000112223 34667
Q ss_pred e---cCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 88 L---KAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 88 l---~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
+ +++|+|+|.|. .|+..||+-.|.|.
T Consensus 76 f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 76 FSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp ECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred EecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 7 78999999999 79999999999985
No 24
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=98.15 E-value=2.8e-06 Score=63.65 Aligned_cols=80 Identities=23% Similarity=0.238 Sum_probs=55.6
Q ss_pred cCCCCCcCCCCcccccCCCceEeCCEEEEEECCC-CeEEEeCcccCCCCCCCCCC--CCCCCCCcEEEecCCccEEEEcC
Q 030594 23 GDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL-HKVDRVSESDYNNCASSNAL--ESHDDGNTRINLKAPGTQYFICP 99 (175)
Q Consensus 23 Gg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~-HsV~~V~~~~Y~~C~~~~~~--~~~s~G~~~v~l~~~G~~YFiC~ 99 (175)
|++.+..+.++ ..++++||+|.|.+... |+|+..+. +-..+.. ..-......++++++|.|+|+|.
T Consensus 11 g~~g~~~F~P~------~i~V~~GdtV~f~n~d~~H~v~~~~~-----~~p~~~~~~~~~~g~t~~~tF~~~G~y~y~C~ 79 (122)
T 2ux6_A 11 GKDGAMVFEPA------SLKVAPGDTVTFIPTDKGHNVETIKG-----MIPDGAEAFKSKINENYKVTFTAPGVYGVKCT 79 (122)
T ss_dssp ETTEEEEEESS------EEEECTTEEEEEEESSSSCCCEECTT-----CSCTTCCCCBCCTTCCEEEEECSCEEEEEEET
T ss_pred CCCCCceEeCC------EEEECCCCEEEEEECCCCcEEEEccc-----ccCCCcceeecCCCCEEEEEeCCCEEEEEEeC
Confidence 54434666553 67899999999999877 99987531 1111111 01112235789999999999998
Q ss_pred CCCCCCCCCeEEEEeecC
Q 030594 100 TAGHCPGGMKLAVTVVAA 117 (175)
Q Consensus 100 v~~HC~~GmKl~I~V~~~ 117 (175)
. |+. |+-.|+|.+.
T Consensus 80 ~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 80 P--HPF--MVGVVQVGDA 93 (122)
T ss_dssp T--EEE--EEEEEEESSS
T ss_pred C--Ccc--CEEEEEEeCC
Confidence 7 887 9999999764
No 25
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.14 E-value=6.7e-06 Score=62.07 Aligned_cols=76 Identities=20% Similarity=0.164 Sum_probs=51.2
Q ss_pred CCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccCCCCCCCCCCCCCCCC-CcEEEecCCccEEEEcCCCCC
Q 030594 27 GWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDYNNCASSNALESHDDG-NTRINLKAPGTQYFICPTAGH 103 (175)
Q Consensus 27 GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y~~C~~~~~~~~~s~G-~~~v~l~~~G~~YFiC~v~~H 103 (175)
++.+.+ +..++++||+|.|..... |+|+..+...- .=.... .....| ...++++++|.|.|+|.. |
T Consensus 54 ~~~F~P------~~i~V~~GdtV~~~N~d~~~H~v~~~~~~~g-~~~~~s--~~l~pG~t~~~tF~~~G~y~y~C~~--H 122 (132)
T 3c75_A 54 KMKYLT------PEVTIKAGETVYWVNGEVMPHNVAFKKGIVG-EDAFRG--EMMTKDQAYAITFNEAGSYDYFCTP--H 122 (132)
T ss_dssp TTEESS------SEEEECTTCEEEEEECSSSCBCCEECTTTSS-SSCEEC--CCBCTTEEEEEEECSCEEEEEECSS--C
T ss_pred eeEEeC------CEEEECCCCEEEEEECCCCceEEEEeCCCCC-cccccc--cccCCCCEEEEEcCCCEEEEEEeCC--C
Confidence 466655 367899999999998765 99987542210 000000 112223 347788999999999996 7
Q ss_pred CCCCCeEEEEee
Q 030594 104 CPGGMKLAVTVV 115 (175)
Q Consensus 104 C~~GmKl~I~V~ 115 (175)
. ||+..|.|.
T Consensus 123 ~--gM~G~I~V~ 132 (132)
T 3c75_A 123 P--FMRGKVIVE 132 (132)
T ss_dssp T--TCEEEEEEC
T ss_pred c--CCEEEEEEC
Confidence 6 999999884
No 26
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.08 E-value=1.2e-06 Score=62.60 Aligned_cols=83 Identities=19% Similarity=0.108 Sum_probs=51.8
Q ss_pred ccceEEEecCCCCCcCCCCcccccCCCceEeCCEEEEEECCC----CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEE
Q 030594 15 VYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL----HKVDRVSESDYNNCASSNALESHDDG---NTRIN 87 (175)
Q Consensus 15 a~a~~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~----HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~ 87 (175)
+.++++.|--. .+.+.+ +..++++||+++|.+.+. |++..-+.. .+ .....| ...++
T Consensus 11 a~~~~v~V~~~-~~~F~P------~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~-~~--------~~~~pg~~~~~~~t 74 (100)
T 4hci_A 11 ASAKVIEVELN-DDYFNP------NVITIPINESTTLLLKNKGKSEHTFTIKKLG-ID--------VVVESGKEKNITVK 74 (100)
T ss_dssp ---CCEEEEEE-TTEEES------SEEEECTTSCEEEEEEECSSSCEEEEEGGGT-EE--------EEECTTCEEEEEEC
T ss_pred CCCcEEEEEEE-CCEEeC------CEEEECCCCEEEEEEEcCCCceEEEEEecCC-cc--------eeecCCcceeEEEe
Confidence 34444544321 245655 367999999999987532 666542111 00 011222 23567
Q ss_pred ecCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 88 LKAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 88 l~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
++++|.|.|+|. .||..||+-.|+|.
T Consensus 75 ~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 75 PKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cccCceEEEECc--cccCCCCEEEEEEC
Confidence 789999999996 69999999999984
No 27
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=98.07 E-value=6.7e-06 Score=59.23 Aligned_cols=83 Identities=19% Similarity=0.132 Sum_probs=56.3
Q ss_pred ccceEEEecCCCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCccc----CCCCCCCCCCCCCCCC-CcEEE
Q 030594 15 VYAVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESD----YNNCASSNALESHDDG-NTRIN 87 (175)
Q Consensus 15 a~a~~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~----Y~~C~~~~~~~~~s~G-~~~v~ 87 (175)
+.+.++.|.- ++|.+.++ ..++++||+|+|..... |+|...+..+ ++.. ....| ...++
T Consensus 16 ~~a~~~~V~~-~~~~F~P~------~i~v~~Gd~V~~~N~d~~~H~v~~~~~~~g~~~~~~~-------~~~pG~~~~~t 81 (105)
T 2ov0_A 16 VADGAIVVDI-AKMKYETP------ELHVKVGDTVTWINREAMPHNVHFVAGVLGEAALKGP-------MMKKEQAYSLT 81 (105)
T ss_dssp CCTTCEEEEE-ETTEESSS------EEEECTTCEEEEEECSSSCBCCEECTTTSSSSCEECC-------CBCTTEEEEEE
T ss_pred CCCcCEEEEE-eecEEcCC------EEEECCCCEEEEEECCCCCEEEEEcCCCCCccccccc-------ccCCCCEEEEE
Confidence 3455565543 35777663 67899999999998765 9998653211 1111 12223 34678
Q ss_pred ecCCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 88 LKAPGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 88 l~~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
++++|.|+|.|.. |- ||+-.|.|.
T Consensus 82 f~~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 82 FTEAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp ECSCEEEEEECSS--CT--TCEEEEEEC
T ss_pred eCCCEEEEEEeCC--CC--CCEEEEEEC
Confidence 8999999999987 54 999999883
No 28
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.93 E-value=2.7e-05 Score=56.25 Aligned_cols=85 Identities=21% Similarity=0.182 Sum_probs=55.1
Q ss_pred ceEEEecCCCCCcCCCCcccccCCCceEeCCEEEEEECCC--CeEEEeCcccCCCCCCCCCCCCCCCC-CcEEEecCCcc
Q 030594 17 AVEYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL--HKVDRVSESDYNNCASSNALESHDDG-NTRINLKAPGT 93 (175)
Q Consensus 17 a~~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~--HsV~~V~~~~Y~~C~~~~~~~~~s~G-~~~v~l~~~G~ 93 (175)
+.++.|.-. ++.+.+ +..++++||+|.|..... |+|+..+... ..=.... .....| ...++++++|.
T Consensus 19 ~~~~~V~~~-~~~F~P------~~i~V~~G~tV~~~N~d~~~H~v~~~~~~~-~~~~~~s--~~l~~g~~~~~tf~~~G~ 88 (106)
T 1id2_A 19 ADAVVVGIE-KMKYLT------PEVTIKAGETVYWVNGEVMPHNVAFKKGIV-GEDAFRG--EMMTKDQAYAITFNEAGS 88 (106)
T ss_dssp TTCEEEEEE-TTEESS------SEEEECTTCEEEEEECSSSCBCCEECTTTS-SSSCEEC--CCBCTTEEEEEEECSCEE
T ss_pred CccEEEEEE-ecEEeC------CEEEECCCCEEEEEECCCCcEEEEEeCCCC-Ccccccc--cccCCCCEEEEEeCCCEE
Confidence 344554432 466665 367899999999998765 9997653221 0000000 112223 35788899999
Q ss_pred EEEEcCCCCCCCCCCeEEEEee
Q 030594 94 QYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 94 ~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
|.|+|.. |. ||+..|.|.
T Consensus 89 y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 89 YDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp EEEECSS--CT--TCEEEEEEC
T ss_pred EEEEeCC--CC--CCEEEEEEC
Confidence 9999997 77 999999883
No 29
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=97.93 E-value=2e-05 Score=62.51 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=57.6
Q ss_pred eEEEecCCCCCcCCCCcccccCCCce-EeCCEEEEEEC--C-------CCeEEEeCccc---------------CCCCCC
Q 030594 18 VEYTVGDTSGWTQGFDYTSWVSGKTF-KVGDVLVFNYG--G-------LHKVDRVSESD---------------YNNCAS 72 (175)
Q Consensus 18 ~~~~VGg~~GWt~~~~Y~~Wa~~~~F-~vGDsLvF~y~--~-------~HsV~~V~~~~---------------Y~~C~~ 72 (175)
.++.|+..+++.+.++ ..++ +.||++.|.|. . .|+++..+..+ |..=+.
T Consensus 43 ~~V~I~~~d~m~F~P~------~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d 116 (167)
T 3ay2_A 43 CAATVESNDNMQFNTK------DIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDD 116 (167)
T ss_dssp CEEEEEECTTSCBSCS------EEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTC
T ss_pred eEEEEEeCCCceEecc------eEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccc
Confidence 4677776667888763 4566 67997666663 2 28988764332 211010
Q ss_pred CCCC---CCCCCCC-cEEEec----CCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 73 SNAL---ESHDDGN-TRINLK----APGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 73 ~~~~---~~~s~G~-~~v~l~----~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.+.+ .....|. ..++++ ++|.|+|+|.+++|=+ |||-.|+|.
T Consensus 117 ~~vl~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 117 ARVVAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp TTEEEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred cchhccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 1001 1223333 356665 7899999999999988 999999986
No 30
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=97.89 E-value=6.3e-05 Score=56.92 Aligned_cols=90 Identities=16% Similarity=0.225 Sum_probs=56.6
Q ss_pred EEEecCCCCCcCCCCcccccCCCceEeC-CEEEEEEC--C-------CCeEEEeCcc----------------cCCCCCC
Q 030594 19 EYTVGDTSGWTQGFDYTSWVSGKTFKVG-DVLVFNYG--G-------LHKVDRVSES----------------DYNNCAS 72 (175)
Q Consensus 19 ~~~VGg~~GWt~~~~Y~~Wa~~~~F~vG-DsLvF~y~--~-------~HsV~~V~~~----------------~Y~~C~~ 72 (175)
++.|+....+.+.+ +..+++.| |.+.|.+. . .|+++..+.. +|..=+.
T Consensus 4 ~v~i~~~d~m~F~p------~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~ 77 (129)
T 1cuo_A 4 ETTVTSGDTMTYST------RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGD 77 (129)
T ss_dssp EEEEEECSSSCCSC------SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTC
T ss_pred EEEEEeCCCceEcc------CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccc
Confidence 45555445678776 36788999 97666663 2 2998877433 2211011
Q ss_pred CCCC---CCCCCCC-cEEEec-----CCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 73 SNAL---ESHDDGN-TRINLK-----APGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 73 ~~~~---~~~s~G~-~~v~l~-----~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.+.+ .....|. ..++++ ++|.|+|+|+.++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 78 KRVIAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCSEECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred ccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 1101 1223332 344443 8999999999999999 899999986
No 31
>1iko_P Ephrin-B2; greek KEY, glycosylation, signaling protein; HET: NAG MAN; 1.92A {Mus musculus} SCOP: b.6.1.5
Probab=97.77 E-value=7.3e-06 Score=65.86 Aligned_cols=78 Identities=21% Similarity=0.312 Sum_probs=51.6
Q ss_pred eEeCCEEEEEECC---------C-CeEEEeCcccCCCCCCCCC-C--CCCC--CCCcEEEec-------------CCc-c
Q 030594 43 FKVGDVLVFNYGG---------L-HKVDRVSESDYNNCASSNA-L--ESHD--DGNTRINLK-------------APG-T 93 (175)
Q Consensus 43 F~vGDsLvF~y~~---------~-HsV~~V~~~~Y~~C~~~~~-~--~~~s--~G~~~v~l~-------------~~G-~ 93 (175)
.++||.|.+--.. . +.|++|++++|+.|+.... . ..-+ .+...|++. ++| +
T Consensus 26 v~igD~LdIiCP~~~~~~~~~~E~~~LY~Vs~~~y~~C~~~~~~~~l~~C~~P~~~~kftikFq~fsP~p~GlEF~pg~~ 105 (178)
T 1iko_P 26 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCARPDQDVKFTIKFQEFSPNLWGLEFQKNKD 105 (178)
T ss_dssp CCTTCEEEEECCCCCSSSCSCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCCEEEEECCSSCSSTTCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 4569999887432 2 6789999999999988632 1 1112 222333332 467 7
Q ss_pred EEEEcCCC-----------CCCC-CCCeEEEEeecCCCC
Q 030594 94 QYFICPTA-----------GHCP-GGMKLAVTVVAASPP 120 (175)
Q Consensus 94 ~YFiC~v~-----------~HC~-~GmKl~I~V~~~~~~ 120 (175)
|||||.-. ++|. .+|||.|.|...+..
T Consensus 106 YY~IstS~G~~~gl~~~~gG~C~t~~Mkl~ikV~~~~~~ 144 (178)
T 1iko_P 106 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGQDASS 144 (178)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETCC---
T ss_pred eEEEecCCcccccccccCCCccccceeEEEEEeecCCCC
Confidence 99999853 6897 599999999776543
No 32
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.58 E-value=0.00029 Score=53.26 Aligned_cols=90 Identities=17% Similarity=0.250 Sum_probs=53.9
Q ss_pred EEEecCCCCCcCCCCcccccCCCce-EeCCEEEEEECC---------CCeEEEeCcc----------------cCCCCCC
Q 030594 19 EYTVGDTSGWTQGFDYTSWVSGKTF-KVGDVLVFNYGG---------LHKVDRVSES----------------DYNNCAS 72 (175)
Q Consensus 19 ~~~VGg~~GWt~~~~Y~~Wa~~~~F-~vGDsLvF~y~~---------~HsV~~V~~~----------------~Y~~C~~ 72 (175)
++.|+...++.+.++ ..++ +.||++.|.|.+ .|+++..+.. +|..=+-
T Consensus 3 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 76 (128)
T 2iaa_C 3 DVSIEGNDSMQFNTK------SIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGD 76 (128)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTC
T ss_pred EEEEEeCCCceEecC------EEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhcccccccccccc
Confidence 345555556887763 3344 559977777642 2998876432 2211011
Q ss_pred CCCC---CCCCCCC-cEEEec----CCc-cEEEEcCCCCCCCCCCeEEEEee
Q 030594 73 SNAL---ESHDDGN-TRINLK----APG-TQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 73 ~~~~---~~~s~G~-~~v~l~----~~G-~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.+.+ .....|. ..++++ ++| .|.|+|++++|=+ |||-.|+|.
T Consensus 77 ~~~~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 77 ERVIAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTEEEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred chhhccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 1101 1123332 345554 678 4999999999999 999999985
No 33
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.55 E-value=0.00022 Score=53.91 Aligned_cols=90 Identities=21% Similarity=0.268 Sum_probs=55.0
Q ss_pred EEEecCCCCCcCCCCcccccCCCce-EeCCEEEEEECC---------CCeEEEeCccc----------------CCCCCC
Q 030594 19 EYTVGDTSGWTQGFDYTSWVSGKTF-KVGDVLVFNYGG---------LHKVDRVSESD----------------YNNCAS 72 (175)
Q Consensus 19 ~~~VGg~~GWt~~~~Y~~Wa~~~~F-~vGDsLvF~y~~---------~HsV~~V~~~~----------------Y~~C~~ 72 (175)
++.|+...++.+.++ ..++ +.||++.|.|.+ .|+++..+..+ |..=+.
T Consensus 4 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~ 77 (128)
T 1nwp_A 4 KVTVDSTDQMSFNTK------DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGD 77 (128)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTC
T ss_pred EEEEEeCCCccEecC------EEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhcccccccccccc
Confidence 455665557888763 4566 779987777742 29988764321 111000
Q ss_pred CCCC---CCCCCCC-cEEEec----CCcc-EEEEcCCCCCCCCCCeEEEEee
Q 030594 73 SNAL---ESHDDGN-TRINLK----APGT-QYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 73 ~~~~---~~~s~G~-~~v~l~----~~G~-~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
...+ .....|. ..++++ ++|. |.|+|++++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 78 ARVIAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTEEEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred chhheeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 0001 1223332 345554 5676 999999999999 999999883
No 34
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.54 E-value=0.00046 Score=52.11 Aligned_cols=90 Identities=17% Similarity=0.266 Sum_probs=53.0
Q ss_pred EEEecCCCCCcCCCCcccccCCCce-EeCCEEEEEECC---------CCeEEEeCcc----------------cCCCCCC
Q 030594 19 EYTVGDTSGWTQGFDYTSWVSGKTF-KVGDVLVFNYGG---------LHKVDRVSES----------------DYNNCAS 72 (175)
Q Consensus 19 ~~~VGg~~GWt~~~~Y~~Wa~~~~F-~vGDsLvF~y~~---------~HsV~~V~~~----------------~Y~~C~~ 72 (175)
++.|+...+..+.++ ..++ +.||++.|.+.+ .|+++..+.. +|..=+-
T Consensus 4 ~v~v~~~d~m~F~p~------~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (129)
T 2ccw_A 4 EATVESNDAMQYNVK------EIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGD 77 (129)
T ss_dssp EEEEEECTTSCBSCS------EEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTC
T ss_pred EEEEEeCCCccEecc------eEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhccccccccccc
Confidence 455555556777753 3344 449977666642 2998876433 2211011
Q ss_pred CCCC---CCCCCCC-cEEEec----CCcc-EEEEcCCCCCCCCCCeEEEEee
Q 030594 73 SNAL---ESHDDGN-TRINLK----APGT-QYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 73 ~~~~---~~~s~G~-~~v~l~----~~G~-~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
.+.+ .....|. ..++++ ++|. |+|+|.+++|=+ |||-.|+|.
T Consensus 78 ~~~~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 78 TRVIAHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTEEEECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred ccceeeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 1101 1123332 345544 5665 999999999988 999999985
No 35
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=97.29 E-value=0.0006 Score=51.81 Aligned_cols=66 Identities=21% Similarity=0.291 Sum_probs=45.7
Q ss_pred CCceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEEecCCccEEEEcCCCCCCC---CCCeE
Q 030594 40 GKTFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDG---NTRINLKAPGTQYFICPTAGHCP---GGMKL 110 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~l~~~G~~YFiC~v~~HC~---~GmKl 110 (175)
..++.+||.++|..++. |++..-+.. . .. ....| ...++++++|.|+|.|.. +|- .+|+.
T Consensus 61 ~l~Vp~G~~V~~~vts~DV~Hsf~ip~~~-~-------k~-d~~PG~~~~~~~~~~~~G~y~~~C~e--~CG~~H~~M~g 129 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPDVIHGFHVEGTN-I-------NV-EVLPGEVSTVRYTFKRPGEYRIICNQ--YCGLGHQNMFG 129 (135)
T ss_dssp SEEEETTSEEEEEEEBSSSCEEEEETTSS-C-------EE-EECBTBCEEEEEECCSCEEEEEECCS--CCSTTSTTCEE
T ss_pred EEEEcCCCEEEEEEEeCCccceEEecCCC-c-------ee-EeCCCCcEEEEEEcCCCEEEEEECcc--cCCCCcCCCEE
Confidence 67899999999999654 877542211 0 01 11123 247889999999999986 443 68999
Q ss_pred EEEeec
Q 030594 111 AVTVVA 116 (175)
Q Consensus 111 ~I~V~~ 116 (175)
.|.|.+
T Consensus 130 ~v~V~~ 135 (135)
T 2cua_A 130 TIVVKE 135 (135)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999863
No 36
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=97.18 E-value=0.00026 Score=50.96 Aligned_cols=65 Identities=15% Similarity=0.096 Sum_probs=42.6
Q ss_pred CCceEeCCEEEEEECCC----CeEEEeCcccCCCCCCCCCCCCCCCCC-c--EEEecCCccEEEEcCCCCCCC-CCCeEE
Q 030594 40 GKTFKVGDVLVFNYGGL----HKVDRVSESDYNNCASSNALESHDDGN-T--RINLKAPGTQYFICPTAGHCP-GGMKLA 111 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~----HsV~~V~~~~Y~~C~~~~~~~~~s~G~-~--~v~l~~~G~~YFiC~v~~HC~-~GmKl~ 111 (175)
..+++.||.++|.+.+. |++..-+.. . ......|. . .|+.+++|.|+|.|.. ||. .+|+..
T Consensus 39 ~i~v~~G~~V~~~~~n~d~~~H~~~i~~~~------~---~~~i~pG~~~~~~f~~~~~G~y~~~C~~--~~~~~~M~g~ 107 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKSPISEGFSIDAFG------V---QEVIKAGETKTISFTADKAGAFTIWCQL--HPKNIHLPGT 107 (112)
T ss_dssp EEEEETTCEEEEEEEECSSSCEEEEEGGGT------E---EEEECTTCEEEEEEECCSCEEEEEBCSS--SCTTTBCCEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEcCCC------c---eeEeCCCCEEEEEEECCCCEEEEEECCC--CCchHHCEEE
Confidence 56899999999987533 776532211 0 11112232 2 4444899999999986 775 349999
Q ss_pred EEee
Q 030594 112 VTVV 115 (175)
Q Consensus 112 I~V~ 115 (175)
|.|.
T Consensus 108 i~V~ 111 (112)
T 1iby_A 108 LNVV 111 (112)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9986
No 37
>3czu_B Ephrin-A1; ATP-binding, kinase, nucleotide-binding, receptor, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG MAN; 2.65A {Homo sapiens} PDB: 3mbw_B*
Probab=97.06 E-value=0.00097 Score=53.63 Aligned_cols=76 Identities=18% Similarity=0.328 Sum_probs=47.8
Q ss_pred CceEeCCEEEEEECCC------------CeEEEeCcccCCCCCCCC-CCCCC-------CCCCcEEEec-----------
Q 030594 41 KTFKVGDVLVFNYGGL------------HKVDRVSESDYNNCASSN-ALESH-------DDGNTRINLK----------- 89 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~~------------HsV~~V~~~~Y~~C~~~~-~~~~~-------s~G~~~v~l~----------- 89 (175)
..+++||.|-+--... ..+++|++++|++|+... +...+ ..|..+|++.
T Consensus 50 i~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~e~y~sC~~~~~~~~~~~C~~P~~~~~p~kftikFQ~FSP~p~Gl 129 (182)
T 3czu_B 50 IHVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGK 129 (182)
T ss_dssp EEECTTCEEEEECCCCC--CCCGGGSCCEEEEEECHHHHHHTCCCCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSC
T ss_pred EEeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhhhccCCCCCcEEEEeCCCCCCCCCcEEEEEEEEcCCCCCCe
Confidence 3577899998864321 457889999999998764 21111 1233333222
Q ss_pred --CCc-cEEEEcC----CCCCCCCCCeEEEEeecCCC
Q 030594 90 --APG-TQYFICP----TAGHCPGGMKLAVTVVAASP 119 (175)
Q Consensus 90 --~~G-~~YFiC~----v~~HC~~GmKl~I~V~~~~~ 119 (175)
++| .||||+. .++.| |||.|.|.....
T Consensus 130 EF~pG~dYY~ISts~~~~gg~C---mrL~v~V~~k~~ 163 (182)
T 3czu_B 130 EFKEGHSYYYISKPIHQHEDRC---LRLKVTVSGKIT 163 (182)
T ss_dssp CCCTTCEEEEEEEESSSCCCSC---CEEEEEECC---
T ss_pred eEeCCCeEEEEEccCCCCCCcc---eEEEEEEecCCC
Confidence 567 6889985 34566 999999986654
No 38
>3d12_B Ephrin-B3; beta propeller, protein-receptor complex, envelope protein, glycoprotein, hemagglutinin, hydrolase, membrane, signal-AN transmembrane; HET: NAG BMA MAN BGC LXZ NGA GL0 GLC LXB NGZ GXL; 3.00A {Mus musculus}
Probab=96.91 E-value=0.0013 Score=50.81 Aligned_cols=74 Identities=23% Similarity=0.260 Sum_probs=48.7
Q ss_pred ceEeCCEEEEEECC------------C-CeEEEeCcccCCCCCCCC-CCCCC----CCCCcEEEec-------------C
Q 030594 42 TFKVGDVLVFNYGG------------L-HKVDRVSESDYNNCASSN-ALESH----DDGNTRINLK-------------A 90 (175)
Q Consensus 42 ~F~vGDsLvF~y~~------------~-HsV~~V~~~~Y~~C~~~~-~~~~~----s~G~~~v~l~-------------~ 90 (175)
.+++||.|-+--.. . ..+++|++++|++|+... +...+ ..+...|++. +
T Consensus 23 ~V~i~D~ldIiCP~~~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~p~G~EF~ 102 (141)
T 3d12_B 23 YPQIGDRLDLLCPRARPPGPHSSPSYEFYKLYLVEGAQGRRCEAPPAPNLLLTCDRPDLDLRFTIKFQEYSPNLWGHEFR 102 (141)
T ss_dssp CCCTTCEEEEEECCCSSCCTTCCSSCCCCEEEEECSHHHHTTBCCSSCEEEEECCCSSSCEEEEEESSSCCSCCSCCCCC
T ss_pred EecCCCEEEEECCCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCeEEEEeCCCCCCeEEEEEEEEcCCCCCceeee
Confidence 56788999887432 2 567899999999998863 22111 1222222211 4
Q ss_pred Cc-cEEEEcCCC-----------CCCC-CCCeEEEEee
Q 030594 91 PG-TQYFICPTA-----------GHCP-GGMKLAVTVV 115 (175)
Q Consensus 91 ~G-~~YFiC~v~-----------~HC~-~GmKl~I~V~ 115 (175)
+| .||||+.-. +-|. ++|||.|.|.
T Consensus 103 pG~~YY~ISts~G~~~gl~~~~gG~C~t~~Mkl~i~V~ 140 (141)
T 3d12_B 103 SHHDYYIIATSDGTREGLESLQGGVCLTRGMKVLLRVG 140 (141)
T ss_dssp TTCEEEEEECSCSSTTTTTCCBCSHHHHTCCEEEEECC
T ss_pred CCCeEEEEecCCCCcccccccCCCccccceEEEEEEec
Confidence 66 689998633 4796 5899999985
No 39
>1shx_A Ephrin-A5; ephrin signaling, hormone-growth factor complex; HET: NAG; 2.10A {Mus musculus} SCOP: b.6.1.5 PDB: 1shw_A* 3mx0_B*
Probab=96.85 E-value=0.0025 Score=49.16 Aligned_cols=75 Identities=20% Similarity=0.314 Sum_probs=48.7
Q ss_pred CceEeCCEEEEEECC----------C-CeEEEeCcccCCCCCCCCCC-CCC--C-----CCCcEEEec------------
Q 030594 41 KTFKVGDVLVFNYGG----------L-HKVDRVSESDYNNCASSNAL-ESH--D-----DGNTRINLK------------ 89 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~----------~-HsV~~V~~~~Y~~C~~~~~~-~~~--s-----~G~~~v~l~------------ 89 (175)
..+++||.|-+--.. . ..+++|++++|++|+..... ..+ + .+...|++.
T Consensus 23 i~V~i~D~lDIiCP~~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFq~fsP~p~G~E 102 (138)
T 1shx_A 23 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 102 (138)
T ss_dssp EEECTTCEEEEECCCCCTTCCSTTCCCEEEEEECHHHHHTTCSSSSEEEEEEECCTTCTTSSCEEEEECCSCCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEEcCCCCCcee
Confidence 357789999886421 2 56789999999999875532 111 1 144444322
Q ss_pred -CCc-cEEEEcCC-----CCCCCCCCeEEEEeecCC
Q 030594 90 -APG-TQYFICPT-----AGHCPGGMKLAVTVVAAS 118 (175)
Q Consensus 90 -~~G-~~YFiC~v-----~~HC~~GmKl~I~V~~~~ 118 (175)
++| .||||+.- ++-| |||.|.|....
T Consensus 103 F~pG~~YY~ISts~~~~~g~~C---lrL~V~V~p~~ 135 (138)
T 1shx_A 103 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTN 135 (138)
T ss_dssp CCTTEEEEEEEEESSCCSCSCC---CEEEEEECCTT
T ss_pred ecCCCeEEEEEcCCCCCCCCce---eEEEEEEEccc
Confidence 477 58899752 2346 99999998754
No 40
>2x11_B Ephrin-A5; receptor-signaling protein complex, developmental protein, signaling platform, kinase, transferase, neurogenesis, receptor, cataract; 4.83A {Homo sapiens}
Probab=96.83 E-value=0.0022 Score=51.33 Aligned_cols=76 Identities=20% Similarity=0.298 Sum_probs=49.9
Q ss_pred CceEeCCEEEEEECC----------C-CeEEEeCcccCCCCCCCCCC-CCC-------CCCCcEEEec------------
Q 030594 41 KTFKVGDVLVFNYGG----------L-HKVDRVSESDYNNCASSNAL-ESH-------DDGNTRINLK------------ 89 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~----------~-HsV~~V~~~~Y~~C~~~~~~-~~~-------s~G~~~v~l~------------ 89 (175)
..+++||.|-+--.. . ..+++|++++|++|+..... ..+ ..|...|++.
T Consensus 52 i~V~i~D~LDIiCP~y~~~~~~~~~E~y~LY~Vs~e~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~FSP~p~G~E 131 (177)
T 2x11_B 52 IDVCINDYLDVFCPHYEDSVPEDKTERYVLYMVNFDGYSACDHTSKGFKRWECNRPHSPNGPLKFSEKFQLFTPFSLGFE 131 (177)
T ss_dssp EEECTTCEEEEECCCCCSSSCSSSCCCEEEEEECHHHHHHTCCTTTEEEEEEECCTTCSSSSCEEEEECCSSCSSTTCCC
T ss_pred EEecCCCEEEEECCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCcEEEEeCCCCCCCCCeEEEEEEEEcCCCCCCcc
Confidence 457789999886421 2 56789999999999875532 111 1234444322
Q ss_pred -CCc-cEEEEcCCC-----CCCCCCCeEEEEeecCCC
Q 030594 90 -APG-TQYFICPTA-----GHCPGGMKLAVTVVAASP 119 (175)
Q Consensus 90 -~~G-~~YFiC~v~-----~HC~~GmKl~I~V~~~~~ 119 (175)
++| .||||+.-. +-| |||.|.|.....
T Consensus 132 F~pG~~YYyISTS~~~~~g~~C---lrLkV~V~p~~~ 165 (177)
T 2x11_B 132 FRPGREYFYISSAIPDNGRRSC---LKLKVFVRPTNS 165 (177)
T ss_dssp CCTTEEEEEEEEESSCCCSSSC---CEEEEEECCTTT
T ss_pred ccCCCeEEEEecCCCCCCCCcc---eEEEEEEEcCCC
Confidence 467 688997522 346 999999988764
No 41
>2vsm_B Ephrin-B2; developmental protein, henipavirus, neurogenesis, glycoprotein, paramyxovirus, envelope protein, cell surface receptor, hendra, virion; HET: NAG; 1.80A {Homo sapiens} PDB: 2wo2_B* 2i85_A 3gxu_B 2vsk_B 2hle_B 1kgy_E
Probab=96.68 E-value=0.0016 Score=50.29 Aligned_cols=74 Identities=22% Similarity=0.328 Sum_probs=48.8
Q ss_pred eEeCCEEEEEECCC----------CeEEEeCcccCCCCCCCC-CCCCC----CCCCcEEEec-------------CCc-c
Q 030594 43 FKVGDVLVFNYGGL----------HKVDRVSESDYNNCASSN-ALESH----DDGNTRINLK-------------APG-T 93 (175)
Q Consensus 43 F~vGDsLvF~y~~~----------HsV~~V~~~~Y~~C~~~~-~~~~~----s~G~~~v~l~-------------~~G-~ 93 (175)
.++||.|.+--... ..+++|++++|+.|+... +...+ ..+...+++. ++| +
T Consensus 25 v~i~D~ldIiCP~~~~~~~~~~E~~~lY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~kft~kFq~fsP~~~G~eF~~g~~ 104 (140)
T 2vsm_B 25 PQIGDKLDIICPKVDSKTVGQYEYYKVYMVDKDQADRCTIKKENTPLLNCAKPDQDIKFTIKFQEFSPNLWGLEFQKNKD 104 (140)
T ss_dssp CCTTCEEEEEECCCC---CCCCCBEEEEEECHHHHHHTBCCTTCCCSEEECCTTSCEEEEEESSSCCSCSSCCCCCTTEE
T ss_pred ecCCCEEEEECCCCCCCCCCCceEEEEEEECHHHhhhcccCCCCcEEEEecCCCCCEEEEEEEEecCCCCCcccccCCCc
Confidence 45789998875322 567889999999998863 22111 1233333322 466 6
Q ss_pred EEEEcCCC-----------CCCC-CCCeEEEEeec
Q 030594 94 QYFICPTA-----------GHCP-GGMKLAVTVVA 116 (175)
Q Consensus 94 ~YFiC~v~-----------~HC~-~GmKl~I~V~~ 116 (175)
||||+.-. +-|. ++|||.|.|..
T Consensus 105 YY~Ists~g~~~gl~~~~gG~C~t~~mkl~i~V~~ 139 (140)
T 2vsm_B 105 YYIISTSNGSLEGLDNQEGGVCQTRAMKILMKVGH 139 (140)
T ss_dssp EEEECCCCBSGGGTTCCBSHHHHHSCCEEEEEETC
T ss_pred eEEEecCCCCccccccccCCccccceEEEEEEecC
Confidence 88998633 4796 58999999864
No 42
>2wo3_B Ephrin-A2; transferase-signaling protein complex, EFN, EPHA4, KINA ephrin, complex, membrane, cell surface receptor, tyrosine- kinase, glycoprotein; HET: NAG; 2.35A {Homo sapiens}
Probab=95.97 E-value=0.012 Score=46.27 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=46.8
Q ss_pred ceEeCCEEEEEECCC------------CeEEEeCcccCCCCCCCCCCC-CC-----C--CCCcEEEec------------
Q 030594 42 TFKVGDVLVFNYGGL------------HKVDRVSESDYNNCASSNALE-SH-----D--DGNTRINLK------------ 89 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~------------HsV~~V~~~~Y~~C~~~~~~~-~~-----s--~G~~~v~l~------------ 89 (175)
.+++||.|-+--... ..+++|++++|++|+...... .+ . .|...|++.
T Consensus 33 ~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~p~~~~kftikFQ~fSP~p~G~E 112 (157)
T 2wo3_B 33 EVSINDYLDIYCPHYGAPLPPAERMEHYVLYMVNGEGHASCDHRQRGFKRWECNRPAAPGGPLKFSEKFQLFTPFSLGFE 112 (157)
T ss_dssp EECTTCEEEEECCCCCSSCCCGGGSCCEEEEEECHHHHHHTCCTTSEEEEEEECCTTCTTSSCEEEEECCSSCSSTTSCC
T ss_pred EeccCCEEEEECCCCCCCCCCCCCceEEEEEEECHHHhccccCCCCCCEEEEeCCCCCCCCCeEEEEEEEECCCCCCCee
Confidence 477899998875322 347899999999998865321 11 1 133333221
Q ss_pred -CCc-cEEEEcCC-----CCCCCCCCeEEEEeecCCC
Q 030594 90 -APG-TQYFICPT-----AGHCPGGMKLAVTVVAASP 119 (175)
Q Consensus 90 -~~G-~~YFiC~v-----~~HC~~GmKl~I~V~~~~~ 119 (175)
++| .||||+.- ++-| |||.|.|.....
T Consensus 113 F~pG~~YY~ISTS~g~~~gg~C---~rlkV~V~~~~~ 146 (157)
T 2wo3_B 113 FRPGHEYYYISATPPNAVDRPC---LRLKVYVRPTQE 146 (157)
T ss_dssp CCTTCEEEEEEECTTCSCCTTC---CEEEEEECCCC-
T ss_pred eeCCCeEEEEEecCCCCCCCcc---eeEEEEEEcCCC
Confidence 467 68999863 2456 588888776553
No 43
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=95.25 E-value=0.019 Score=50.10 Aligned_cols=77 Identities=16% Similarity=0.197 Sum_probs=51.7
Q ss_pred CCCceEeCCEEEEEECCC----CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCCCCCeEEEEe
Q 030594 39 SGKTFKVGDVLVFNYGGL----HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPGGMKLAVTV 114 (175)
Q Consensus 39 ~~~~F~vGDsLvF~y~~~----HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V 114 (175)
...+++.||+|+|++.+. |++..-.......|... --.+-...|+++++|+|||.|....|=..||+..|.|
T Consensus 55 p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~~~~~~i~----pG~~~~~~f~~~~~Gt~~y~~~~~~h~~~Gm~G~i~V 130 (447)
T 2dv6_A 55 PTLVVHEGETVQVNLVNGEGAQHDVVVDQYAARSAIVNG----KNASSTFSFVASKVGEFNYYCSIAGHRQAGMEGNIQV 130 (447)
T ss_dssp CCEEEETTCEEEEEEECSSSSCBCCEETTTTEECCCBCS----TTBEEEEEEECCSCEEEEEECCSTTHHHHTCEEEEEE
T ss_pred CeEEEcCCCEEEEEEEcCCCCceEEEEccCCcccceecC----CCCeEEEEEEcCCCEEEEEEeCCCChhhCCCEEEEEE
Confidence 357899999999988654 66643222221223221 1111224567789999999999988877899999999
Q ss_pred ecCCC
Q 030594 115 VAASP 119 (175)
Q Consensus 115 ~~~~~ 119 (175)
.....
T Consensus 131 ~~~~~ 135 (447)
T 2dv6_A 131 LPGNR 135 (447)
T ss_dssp ESSCC
T ss_pred eCCcc
Confidence 87543
No 44
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.24 E-value=0.044 Score=43.15 Aligned_cols=69 Identities=20% Similarity=0.246 Sum_probs=45.9
Q ss_pred CCCceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEEecCCccEEEEcCC-CCCCCCCCeEE
Q 030594 39 SGKTFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDG---NTRINLKAPGTQYFICPT-AGHCPGGMKLA 111 (175)
Q Consensus 39 ~~~~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~l~~~G~~YFiC~v-~~HC~~GmKl~ 111 (175)
+...+.+|+.++|..++. |+...-+.. -.. ....| ...++.+++|.||+.|.. -++-..+|+..
T Consensus 93 n~l~VP~G~~Vr~~vTS~DViHsf~IP~lg--------ik~-da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~ 163 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSPDVIHGFHVEGTN--------INV-EVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGT 163 (168)
T ss_dssp SSEEEETTSEEEEEEECSSSCEEEEETTSS--------CEE-EECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEE
T ss_pred CEEEEeCCCeEEEEEecCCceEEEEECCCC--------eEE-EecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEE
Confidence 356899999999998765 777652211 000 01122 246788999999999985 23334579999
Q ss_pred EEeec
Q 030594 112 VTVVA 116 (175)
Q Consensus 112 I~V~~ 116 (175)
|.|.+
T Consensus 164 V~V~e 168 (168)
T 3s8f_B 164 IVVKE 168 (168)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99863
No 45
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=94.18 E-value=0.064 Score=49.86 Aligned_cols=67 Identities=18% Similarity=0.132 Sum_probs=45.1
Q ss_pred CCceEeCCEEEEEECC----C---CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEEecCCccEEEEcCC---CCCCCC
Q 030594 40 GKTFKVGDVLVFNYGG----L---HKVDRVSESDYNNCASSNALESHDDG---NTRINLKAPGTQYFICPT---AGHCPG 106 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~----~---HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~l~~~G~~YFiC~v---~~HC~~ 106 (175)
..++++||.++|...+ . |++..-+.. . .+ ....| ...|+++++|.|||.|.. ..| .
T Consensus 514 ~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~g-v-~~-------~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H--~ 582 (595)
T 1fwx_A 514 SFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYG-V-AM-------EIGPQMTSSVTFVAANPGVYWYYCQWFCHALH--M 582 (595)
T ss_dssp EEEEETTCEEEEEEEECCCSTTCCEEEEETTTT-E-EE-------EECTTCEEEEEEECCSCEEEEEECCSCCSTTC--T
T ss_pred EEEEECCCEEEEEEEeCCCCCCceeeEEecCCC-c-ce-------eeCCCCeEEEEEECCCCEEEEEECCCCCCCCc--c
Confidence 5678999999999765 1 666542211 0 01 11222 246788999999999984 245 4
Q ss_pred CCeEEEEeecC
Q 030594 107 GMKLAVTVVAA 117 (175)
Q Consensus 107 GmKl~I~V~~~ 117 (175)
||+..|.|.+.
T Consensus 583 gM~G~IiV~p~ 593 (595)
T 1fwx_A 583 EMRGRMLVEPK 593 (595)
T ss_dssp TCEEEEEEECC
T ss_pred CCEEEEEEEcC
Confidence 99999999764
No 46
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.03 E-value=0.064 Score=50.19 Aligned_cols=73 Identities=18% Similarity=0.207 Sum_probs=48.9
Q ss_pred CCcCCCCcccccCCCceEeCCEEEEEECC-----C--CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEEecCCccEEE
Q 030594 27 GWTQGFDYTSWVSGKTFKVGDVLVFNYGG-----L--HKVDRVSESDYNNCASSNALESHDDG---NTRINLKAPGTQYF 96 (175)
Q Consensus 27 GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~-----~--HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~l~~~G~~YF 96 (175)
.|.+.++ ..++.+||.++|..++ . |+...-+.. .......| ...|+.+++|.|||
T Consensus 552 ~~~FsP~------eI~VP~GdtVrfiLTN~D~veDViHSF~IPslG---------IK~DaiPGrtnsvtFtadkPGvY~y 616 (638)
T 3sbq_A 552 APAFGVQ------EFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHG---------VSMEISPQQTSSITFVADKPGLHWY 616 (638)
T ss_dssp TTEESCC------EEEEETTCEEEEEEEECCCSTTCCEEEEETTTT---------EEEEECTTCEEEEEEECCSCEEEEE
T ss_pred cccccCC------EEEEecCceeEEEEecCCcCCCceeeeEecCCC---------ceeeeCCCCeEEEEEEcCCCEEEEE
Confidence 3555553 6789999999998765 3 777642211 00011222 24678899999999
Q ss_pred EcCCCCCCCC---CCeEEEEeec
Q 030594 97 ICPTAGHCPG---GMKLAVTVVA 116 (175)
Q Consensus 97 iC~v~~HC~~---GmKl~I~V~~ 116 (175)
+|+. +|-. +|+..|.|.+
T Consensus 617 ~CSE--~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 617 YCSW--FCHALHMEMVGRMMVEP 637 (638)
T ss_dssp ECCS--CCSTTCTTCEEEEEEEC
T ss_pred ECCC--cCCCCcccceEEEEEec
Confidence 9996 6654 5999999975
No 47
>3hei_B Ephrin-A1; EPH receptor tyrosine kinase, cell membrane, disulfi glycoprotein, GPI-anchor, lipoprotein, membrane, ATP-bindin kinase; 2.00A {Homo sapiens} SCOP: b.6.1.0
Probab=93.74 E-value=0.082 Score=40.32 Aligned_cols=73 Identities=19% Similarity=0.267 Sum_probs=44.3
Q ss_pred ceEeCCEEEEEECC-----------C-CeEEEeCcccCCCCCCCC-CCCCC-------CCCCcEEEec------------
Q 030594 42 TFKVGDVLVFNYGG-----------L-HKVDRVSESDYNNCASSN-ALESH-------DDGNTRINLK------------ 89 (175)
Q Consensus 42 ~F~vGDsLvF~y~~-----------~-HsV~~V~~~~Y~~C~~~~-~~~~~-------s~G~~~v~l~------------ 89 (175)
.+++||.|-+--.. . ..+++|++++|++|+... +...+ ..|...|++.
T Consensus 23 ~V~i~D~LDIiCP~y~~~~~~~~~~E~y~LY~Vs~~~y~~C~~~~~~~~~~~C~~P~~~~~~~kft~kFQ~FSP~p~G~E 102 (132)
T 3hei_B 23 HVQLNDYVDIICPHYEDHSVADAAMEQYILYLVEHEEYQLCQPQSKDQVRWQCNRPSAKHGPEKLSEKFQRFTPFTLGKE 102 (132)
T ss_dssp EECTTCEEEEECCCCCTTSSCGGGCCCEEEEEECHHHHHHTCCSCGGGEEEEECCTTCTTSCCEEEEECCSCCSCTTSCC
T ss_pred EeCCCCeEEEECCCCCCCCCCCCCccEEEEEEeCHHHhccccCCCCCcEEEEeCCCCCCCCceEEEEEEEEcCCCCCCee
Confidence 46789999876532 2 457889999999999765 22111 1233344322
Q ss_pred -CCc-cEEEEcCCCCCCCC--CCeEEEEee
Q 030594 90 -APG-TQYFICPTAGHCPG--GMKLAVTVV 115 (175)
Q Consensus 90 -~~G-~~YFiC~v~~HC~~--GmKl~I~V~ 115 (175)
++| .||||+. +.|=.. =+||.|.|.
T Consensus 103 F~pG~~YY~ISt-~~~~~~~~cl~l~v~v~ 131 (132)
T 3hei_B 103 FKEGHSYYYISK-PIHQHEDRCLRLKVTVK 131 (132)
T ss_dssp CCTTCEEEEEEE-ESSCCCCSCCEEEEEEC
T ss_pred ecCCCcEEEEEc-cCCCCCCcceEEEEEEE
Confidence 467 5888886 322111 168887774
No 48
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.47 E-value=0.76 Score=34.47 Aligned_cols=86 Identities=16% Similarity=0.229 Sum_probs=48.1
Q ss_pred EEecCCCCCcCCCCcccccCCCceEe-CCEEEEEEC--C-------CCeEEEeCcc----------------cCCCCCCC
Q 030594 20 YTVGDTSGWTQGFDYTSWVSGKTFKV-GDVLVFNYG--G-------LHKVDRVSES----------------DYNNCASS 73 (175)
Q Consensus 20 ~~VGg~~GWt~~~~Y~~Wa~~~~F~v-GDsLvF~y~--~-------~HsV~~V~~~----------------~Y~~C~~~ 73 (175)
+.|-.+.+..+.++ ..++.. |++++|.+. . +|+++..+.+ +|-.=+-.
T Consensus 5 v~i~~~d~M~F~p~------~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~ 78 (125)
T 3fsa_A 5 VDIQGNDQMQFNTN------AITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDS 78 (125)
T ss_dssp EEEEBCTTSCBSCS------EEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCT
T ss_pred EEEEccCCcEEecC------EEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCc
Confidence 44444456777652 334433 999876664 3 3999887322 22211111
Q ss_pred CCC---CCCCCCC-cEEEec-----CCccEEEEcCCCCCCCCCCeEEEEee
Q 030594 74 NAL---ESHDDGN-TRINLK-----APGTQYFICPTAGHCPGGMKLAVTVV 115 (175)
Q Consensus 74 ~~~---~~~s~G~-~~v~l~-----~~G~~YFiC~v~~HC~~GmKl~I~V~ 115 (175)
..+ .....|. ..++++ ++|.|-|+|+ +|= |||-.|+|.
T Consensus 79 ~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 79 RVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred cceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 111 1123343 345555 5699999999 786 999999873
No 49
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=83.39 E-value=1.3 Score=37.06 Aligned_cols=76 Identities=21% Similarity=0.337 Sum_probs=47.1
Q ss_pred CCceEeCCEEEEEECC-----C-CeEEEeCcccCCCCCCCCCCCCCCCCC---cEEEecCCccEEEEcCCCC----CCCC
Q 030594 40 GKTFKVGDVLVFNYGG-----L-HKVDRVSESDYNNCASSNALESHDDGN---TRINLKAPGTQYFICPTAG----HCPG 106 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~-----~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~---~~v~l~~~G~~YFiC~v~~----HC~~ 106 (175)
..+++.||+|++++.+ . |++..=.....+ -..+......|. ..|+++++|++||-|...+ |=..
T Consensus 66 ~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~~~---~~~~~~~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 142 (336)
T 1oe1_A 66 TLVVHEGDYVQLTLVNPATNAMPHNVDFHGATGAL---GGAKLTNVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVS 142 (336)
T ss_dssp CEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG---GGGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHT
T ss_pred eEEEcCCCEEEEEEEcCCCCCccccceECCCCCCC---CCcceEEeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhC
Confidence 3578899999988865 3 666542111000 001111123332 4667789999999998754 4457
Q ss_pred CCeEEEEeecCC
Q 030594 107 GMKLAVTVVAAS 118 (175)
Q Consensus 107 GmKl~I~V~~~~ 118 (175)
||.-.|.|....
T Consensus 143 Gl~G~liV~~~~ 154 (336)
T 1oe1_A 143 GMSGTLMVLPRD 154 (336)
T ss_dssp TCEEEEEEECTT
T ss_pred CCeEEEEEecCc
Confidence 999999998644
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=83.26 E-value=1.3 Score=37.05 Aligned_cols=75 Identities=19% Similarity=0.260 Sum_probs=47.1
Q ss_pred CCceEeCCEEEEEECCC------CeEEEeCcccCCCCCCCCCCCCCCCC---CcEEEecCCccEEEEcCCCC-----CCC
Q 030594 40 GKTFKVGDVLVFNYGGL------HKVDRVSESDYNNCASSNALESHDDG---NTRINLKAPGTQYFICPTAG-----HCP 105 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~------HsV~~V~~~~Y~~C~~~~~~~~~s~G---~~~v~l~~~G~~YFiC~v~~-----HC~ 105 (175)
..+++.||+|++++.+. |.+..-.....+.- ........| ...|+++++|++||-|-..+ |=.
T Consensus 65 ~i~~~~Gd~v~v~~~N~~~~~h~Hg~~~~~~~~~~~~---~~~~~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~ 141 (333)
T 1mzy_A 65 LMIVHEGDYVELTLINPPENTMPHNIDFHAATGALGG---GGLTLINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVV 141 (333)
T ss_dssp EEEEETTCEEEEEEEECTTCCSCBCCEETTSCSGGGG---GGGCCBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHH
T ss_pred cEEecCCCEEEEEEEECCCCcccccceecCCCCCCCC---CceeEeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhh
Confidence 35788999999988652 66654221111100 011112233 24677789999999998764 566
Q ss_pred CCCeEEEEeecC
Q 030594 106 GGMKLAVTVVAA 117 (175)
Q Consensus 106 ~GmKl~I~V~~~ 117 (175)
.||.-.+.|...
T Consensus 142 ~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 142 SGMAGCIMVLPR 153 (333)
T ss_dssp TTCEEEEEEECT
T ss_pred CCCEEEEEEccC
Confidence 899999988754
No 51
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=78.05 E-value=2 Score=35.85 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=31.1
Q ss_pred cEEEecCCccEEEEcCCCCCC-CCCCeEEEEeecCCCC
Q 030594 84 TRINLKAPGTQYFICPTAGHC-PGGMKLAVTVVAASPP 120 (175)
Q Consensus 84 ~~v~l~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~~~ 120 (175)
..++++++|.|+|.|....|+ ..||.-.|.|.....+
T Consensus 285 vlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~ 322 (336)
T 1oe1_A 285 ALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWND 322 (336)
T ss_dssp EEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEEEcCCCceEEEEechhhccccCCCeEEEEECCCCCh
Confidence 356788999999999988898 8999999999876543
No 52
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=72.76 E-value=3.8 Score=34.20 Aligned_cols=75 Identities=23% Similarity=0.379 Sum_probs=46.5
Q ss_pred CceEeCCEEEEEECC-----C-CeEEEeCcccCCCCCCCCCCCCCCCCC---cEEEecCCccEEEEcCCCC----CCCCC
Q 030594 41 KTFKVGDVLVFNYGG-----L-HKVDRVSESDYNNCASSNALESHDDGN---TRINLKAPGTQYFICPTAG----HCPGG 107 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~-----~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~---~~v~l~~~G~~YFiC~v~~----HC~~G 107 (175)
.+++.||+|++++.+ . |.+..-.....+ + ..+......|. ..|+++++|++||-|...+ |=..|
T Consensus 73 i~v~~Gd~v~v~~~N~~~~~~~hg~~~~~~~~~~--~-~~~~~~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~G 149 (340)
T 2bw4_A 73 MVVHENDYVELRLINPDTNTLLHNIDFHAATGAL--G-GGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSG 149 (340)
T ss_dssp EEEETTCEEEEEEEECTTCCSCBCCEETTSCSGG--G-GGGGCCBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTT
T ss_pred EEEcCCCEEEEEEEeCCCCCccCcceeCCcCCCC--C-CccceEeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCc
Confidence 578899999998865 2 666542111000 0 01111122332 4677789999999998754 45689
Q ss_pred CeEEEEeecCC
Q 030594 108 MKLAVTVVAAS 118 (175)
Q Consensus 108 mKl~I~V~~~~ 118 (175)
|.-.+.|....
T Consensus 150 l~G~~iV~~~~ 160 (340)
T 2bw4_A 150 MNGAIMVLPRD 160 (340)
T ss_dssp CEEEEEEECTB
T ss_pred CEEEEEEccCc
Confidence 99998887643
No 53
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=72.72 E-value=3.1 Score=34.87 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=44.0
Q ss_pred CCceEeCCEEEEEECCC------CeEEEeCcccCCCCCCCCCCCCCCCCC---cEEEecCCccEEEEcCCC---CCCCCC
Q 030594 40 GKTFKVGDVLVFNYGGL------HKVDRVSESDYNNCASSNALESHDDGN---TRINLKAPGTQYFICPTA---GHCPGG 107 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~------HsV~~V~~~~Y~~C~~~~~~~~~s~G~---~~v~l~~~G~~YFiC~v~---~HC~~G 107 (175)
..+++.||++++++.+. |++..=-....+. .. . ......|. ..|+.+++|++||-|... .|=..|
T Consensus 71 ~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~~dG-~~-~-~~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~G 147 (327)
T 1kbv_A 71 MIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGG-GA-A-ATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANG 147 (327)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG-GT-T-TTCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred eEEEeCCCEEEEEEEECCCCCCceeeEeCccccCCC-CC-c-ceeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcc
Confidence 45789999999987543 4443210000000 00 0 00122232 366778999999999753 344679
Q ss_pred CeEEEEeecC
Q 030594 108 MKLAVTVVAA 117 (175)
Q Consensus 108 mKl~I~V~~~ 117 (175)
|.-.|.|...
T Consensus 148 l~G~~iV~~~ 157 (327)
T 1kbv_A 148 MYGLILVEPK 157 (327)
T ss_dssp CEEEEEEECT
T ss_pred eEEEEEEecC
Confidence 9999999864
No 54
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=71.48 E-value=1.4 Score=38.19 Aligned_cols=75 Identities=20% Similarity=0.258 Sum_probs=44.1
Q ss_pred CCceEeCCEEEEEECCC------CeEEEeCcccCCCCCCCCC-CCCCCCCC---cEEEecCCccEEEEcC---CCCCCCC
Q 030594 40 GKTFKVGDVLVFNYGGL------HKVDRVSESDYNNCASSNA-LESHDDGN---TRINLKAPGTQYFICP---TAGHCPG 106 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~------HsV~~V~~~~Y~~C~~~~~-~~~~s~G~---~~v~l~~~G~~YFiC~---v~~HC~~ 106 (175)
..+++.||+|++++.+. |++..=-....+. .+ ......|. ..|..+++|++||-|- ...|=..
T Consensus 61 ~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~~dG----~~~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~ 136 (442)
T 2zoo_A 61 FIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTGPGG----GAESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIAN 136 (442)
T ss_dssp BEEEETTCEEEEEEEECTTCSSCBCCEETTCCSGGG----GGGGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHT
T ss_pred cEEEeCCCEEEEEEEECCCCCCCCCEEecCCcCCCC----CCccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhC
Confidence 45788999999887532 4443211000000 00 00122232 3667789999999994 3345568
Q ss_pred CCeEEEEeecCC
Q 030594 107 GMKLAVTVVAAS 118 (175)
Q Consensus 107 GmKl~I~V~~~~ 118 (175)
||.-.|.|....
T Consensus 137 Gl~G~~iv~~~~ 148 (442)
T 2zoo_A 137 GMYGLILVEPKE 148 (442)
T ss_dssp TCEEEEEEECTT
T ss_pred ccEEEEEEeCCC
Confidence 999999988543
No 55
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=70.99 E-value=4.8 Score=33.09 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=46.1
Q ss_pred CCceEeCCEEEEEECCC----CeEEEeCcccCCCCCCCCC--CCCCCCC---CcEEEecCCccEEEEcCCC---CCCCCC
Q 030594 40 GKTFKVGDVLVFNYGGL----HKVDRVSESDYNNCASSNA--LESHDDG---NTRINLKAPGTQYFICPTA---GHCPGG 107 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~----HsV~~V~~~~Y~~C~~~~~--~~~~s~G---~~~v~l~~~G~~YFiC~v~---~HC~~G 107 (175)
..+++.||+|++++.+. |++..=-.. ...-+-... ......| ...|+.+++|++||-|-.. .|=..|
T Consensus 67 ~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~-~~~~DG~p~~~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~G 145 (288)
T 3gdc_A 67 TLWAREGDALRIHFTNAGAHPHTIHFHGVH-RATMDGTPGIGAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKG 145 (288)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEESSCC-CGGGSCCTTSTTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTT
T ss_pred cEEEeCCCEEEEEEEeCCCCcccEEecccc-ccccCCCCCccceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCc
Confidence 36789999999988654 444331100 000010000 0011222 2467778999999999875 355689
Q ss_pred CeEEEEeecCC
Q 030594 108 MKLAVTVVAAS 118 (175)
Q Consensus 108 mKl~I~V~~~~ 118 (175)
|.-.|.|.+..
T Consensus 146 l~G~liV~~~~ 156 (288)
T 3gdc_A 146 LYGGFIVEPKE 156 (288)
T ss_dssp CEEEEEEECSS
T ss_pred CeEEEEEeCCc
Confidence 99999987654
No 56
>3l6w_A Hemocyanin 1; cupredoxin domain, copper-binding protein, metal-binding, oxygen binding; 4.00A {Megathura crenulata} PDB: 3qjo_A
Probab=70.11 E-value=5.3 Score=36.33 Aligned_cols=81 Identities=14% Similarity=0.151 Sum_probs=52.8
Q ss_pred CCCcCCCCcccccCCCceEeCCEEEEEECCC---CeEEEe-CcccCCCCCCCCCC-CCCCCCCcEEEecCCccEEEEcCC
Q 030594 26 SGWTQGFDYTSWVSGKTFKVGDVLVFNYGGL---HKVDRV-SESDYNNCASSNAL-ESHDDGNTRINLKAPGTQYFICPT 100 (175)
Q Consensus 26 ~GWt~~~~Y~~Wa~~~~F~vGDsLvF~y~~~---HsV~~V-~~~~Y~~C~~~~~~-~~~s~G~~~v~l~~~G~~YFiC~v 100 (175)
+|-.+++ +..++-|-.|+|.=-.. .-++.+ +.+....|...--. ..|.-| .+..|+ +|.|||..+.
T Consensus 405 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~ 475 (491)
T 3l6w_A 405 KDVNLPP-------KVVVKRGTKIMFMSVDEAVTTPMLNLGSYTAMFKCKVPPFSFHAFELG-KMYSVE-SGDYFMTAST 475 (491)
T ss_pred CCCCCCC-------eeEeecCCEEEEEecccchhhHHHhhhhhhhhhccccCCCccCccccc-ceEecC-CCceEecCCh
Confidence 3456665 56788999999965432 223333 55555679875321 222222 334444 8999999999
Q ss_pred CCCCCCCC-eEEEEee
Q 030594 101 AGHCPGGM-KLAVTVV 115 (175)
Q Consensus 101 ~~HC~~Gm-Kl~I~V~ 115 (175)
.+-|++|- |+.|.|.
T Consensus 476 ~~~~~~~~~~~~~~~~ 491 (491)
T 3l6w_A 476 TELCNDNNLRIHVHVD 491 (491)
T ss_pred HHHHhCCceeEEEEeC
Confidence 99999997 9999883
No 57
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=67.61 E-value=3.8 Score=34.17 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=30.3
Q ss_pred EEEecCCccEEEEcCCCCCC-CCCCeEEEEeecCCC
Q 030594 85 RINLKAPGTQYFICPTAGHC-PGGMKLAVTVVAASP 119 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~~ 119 (175)
.++.+++|.|+|.|-...|+ +.||.-.|.|.....
T Consensus 286 ~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 286 LYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred EEEcCCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 56778999999999999999 999999999986543
No 58
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=62.61 E-value=11 Score=31.08 Aligned_cols=68 Identities=16% Similarity=0.167 Sum_probs=42.8
Q ss_pred CceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCCC---CCeEEEEe
Q 030594 41 KTFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPG---GMKLAVTV 114 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~~---GmKl~I~V 114 (175)
..+.+|+.++|.-++. |+...-+..-=....+. ......++.+++|.||..|+. -|-. .|++.|.|
T Consensus 173 l~lP~g~~v~~~~tS~DViHsf~ip~l~~k~da~PG------~~n~~~~~~~~~G~y~g~Cse--~CG~~H~~M~~~v~v 244 (262)
T 2gsm_B 173 MVVPVNKTVVVQVTGADVIHSWTVPAFGVKQDAVPG------RLAQLWFRAEREGIFFGQCSE--LCGISHAYMPITVKV 244 (262)
T ss_dssp EEEETTSEEEEEEEESSSCEEEEEGGGTEEEEECBT------CCEEEEEECCSCEEEEECCCS--CCSTTGGGCCEEEEE
T ss_pred EEEecCCEEEEEEEECcccceeeecccCceEEecCC------ceeEEEEecCCcEEEEEEChH--hcccCcccCeEEEEE
Confidence 3578999999999765 66654211100000010 111236788999999999984 6754 49998888
Q ss_pred ec
Q 030594 115 VA 116 (175)
Q Consensus 115 ~~ 116 (175)
.+
T Consensus 245 v~ 246 (262)
T 2gsm_B 245 VS 246 (262)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 59
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=62.23 E-value=11 Score=31.97 Aligned_cols=69 Identities=13% Similarity=0.184 Sum_probs=43.0
Q ss_pred ceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCC---CCCeEEEEee
Q 030594 42 TFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCP---GGMKLAVTVV 115 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~---~GmKl~I~V~ 115 (175)
.+.+|+.++|.-++. |+...-+..-=..+.+. ......++.+++|.||..|+. -|- ..|++.|.|.
T Consensus 192 vlP~g~~V~~~ltS~DViHsf~iP~lg~k~daiPG------~~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~vv 263 (298)
T 3hb3_B 192 VVPVGKKVLVQVTATDVIHAWTIPAFAVKQDAVPG------RIAQLWFSVDQEGVYFGQCSE--LCGINHAYMPIVVKAV 263 (298)
T ss_dssp EEESSSEEEEEEEESSSCEEEEEGGGTEEEEECTT------CCEEEEEECSSSEEEEECCCS--CCSTTTTSCCEEEEEE
T ss_pred EEEcCCEEEEEEEeCCccceeeEcccCceEEecCC------ceEEEEEEeCCCEEEEEEccc--ccCcCccCCeeEEEEE
Confidence 566899999998765 76654211000001110 111246788999999999985 564 5699999988
Q ss_pred cCC
Q 030594 116 AAS 118 (175)
Q Consensus 116 ~~~ 118 (175)
+..
T Consensus 264 s~~ 266 (298)
T 3hb3_B 264 SQE 266 (298)
T ss_dssp CHH
T ss_pred cHH
Confidence 643
No 60
>1yel_A AT1G16640; CESG, protein structure initiative, structural genomics, center for eukaryotic structural genomics, unknown function; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=61.39 E-value=2.1 Score=30.12 Aligned_cols=19 Identities=26% Similarity=0.366 Sum_probs=16.1
Q ss_pred cCCCceEeCCEEEEEECCC
Q 030594 38 VSGKTFKVGDVLVFNYGGL 56 (175)
Q Consensus 38 a~~~~F~vGDsLvF~y~~~ 56 (175)
+..+..+.||.|+|+|...
T Consensus 73 v~~~~L~~GD~lvF~~~~~ 91 (104)
T 1yel_A 73 VKDNNLEDGKYLQFIYDRD 91 (104)
T ss_dssp HHHHTCCTTCEEEEEECSS
T ss_pred HHHcCCCCCCEEEEEEcCC
Confidence 3467899999999999876
No 61
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=56.91 E-value=3.9 Score=33.61 Aligned_cols=32 Identities=19% Similarity=0.170 Sum_probs=28.3
Q ss_pred EEEecCCccEEEEcCCCCCCCCCCeEEEEeec
Q 030594 85 RINLKAPGTQYFICPTAGHCPGGMKLAVTVVA 116 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~~ 116 (175)
.+..+.||.|.|.|-+..|=+.||.-.++|.+
T Consensus 257 ~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 257 ELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 45667999999999999999999999999864
No 62
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=53.66 E-value=1.8 Score=35.96 Aligned_cols=77 Identities=10% Similarity=0.141 Sum_probs=31.9
Q ss_pred CCceEeCCEEEEEECCC--C-eEEEeC--cccCCCCC--CCCCCCCCC--CCCcEEEecCCccEEEEcCCCCCCCCCCeE
Q 030594 40 GKTFKVGDVLVFNYGGL--H-KVDRVS--ESDYNNCA--SSNALESHD--DGNTRINLKAPGTQYFICPTAGHCPGGMKL 110 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~--H-sV~~V~--~~~Y~~C~--~~~~~~~~s--~G~~~v~l~~~G~~YFiC~v~~HC~~GmKl 110 (175)
..+++.||+++|+.-+. . ....+. ...++. + ..+.+.... .-...++.+++|.++|.|-+..|-..||..
T Consensus 216 ~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~-dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~ 294 (306)
T 1sdd_A 216 DITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ-NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQA 294 (306)
T ss_dssp CCCCCCC------BBCCCSSSCEECCBCSSTTCEE-TTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBC
T ss_pred ceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee-CCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeE
Confidence 35678899999887654 1 233221 111110 0 000111111 112356778899999999999999999999
Q ss_pred EEEeecC
Q 030594 111 AVTVVAA 117 (175)
Q Consensus 111 ~I~V~~~ 117 (175)
.+.|...
T Consensus 295 ~~~V~~~ 301 (306)
T 1sdd_A 295 YIDIKNC 301 (306)
T ss_dssp CC-----
T ss_pred EEEEecC
Confidence 9888754
No 63
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=52.68 E-value=13 Score=31.69 Aligned_cols=68 Identities=13% Similarity=0.068 Sum_probs=43.3
Q ss_pred CCceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCC---CCCeEEEE
Q 030594 40 GKTFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCP---GGMKLAVT 113 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~---~GmKl~I~ 113 (175)
...+.+|..++|.-++. |+-..-+..-=....+. ......++.+++|.||..|+. -|- ..|++.|.
T Consensus 152 ~l~lP~g~~V~~~lTS~DViHsf~IP~lg~k~DaiPG------r~n~~~~~~~~~G~y~g~CsE--~CG~~Hs~M~~~v~ 223 (315)
T 1fft_B 152 EIAFPANTPVYFKVTSNSVMNSFFIPRLGSQIYAMAG------MQTRLHLIANEPGTYDGISAS--YSGPGFSGMKFKAI 223 (315)
T ss_dssp BCCCCSSSEEEEEECBSSSCEEEEEGGGTEEEEECBT------SCEEEEEECCSCBCCEEBCCS--CCSTTTTTCCEECC
T ss_pred eEEEeCCCEEEEEEEeCCccceeeecccCcEEeecCC------cceeeEEecCCCeEEEEeccc--cchhhHHhccceEE
Confidence 45688999999999865 66654211100001110 111135788999999999984 665 45999988
Q ss_pred ee
Q 030594 114 VV 115 (175)
Q Consensus 114 V~ 115 (175)
|.
T Consensus 224 vv 225 (315)
T 1fft_B 224 AT 225 (315)
T ss_dssp BC
T ss_pred Ee
Confidence 87
No 64
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=52.56 E-value=13 Score=31.39 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=27.3
Q ss_pred cCCccEEEEcCCCCCCCCCCeEEEEeecCCC
Q 030594 89 KAPGTQYFICPTAGHCPGGMKLAVTVVAASP 119 (175)
Q Consensus 89 ~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~ 119 (175)
+.+|.++|-|-+..|=+.||...+.|.....
T Consensus 279 ~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 279 VGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 5789999999999998999999999987654
No 65
>4i1k_A B3 domain-containing transcription factor VRN1; B3 domain beta-barrel, DNA binding protein; 1.60A {Arabidopsis thaliana}
Probab=51.80 E-value=4.2 Score=30.75 Aligned_cols=25 Identities=28% Similarity=0.239 Sum_probs=18.5
Q ss_pred cCCCceEeCCEEEEEECCC-CeEEEe
Q 030594 38 VSGKTFKVGDVLVFNYGGL-HKVDRV 62 (175)
Q Consensus 38 a~~~~F~vGDsLvF~y~~~-HsV~~V 62 (175)
+..+.+++||.++|++... .-+.+|
T Consensus 112 v~dn~L~~GD~cvFeli~~~~~~f~V 137 (146)
T 4i1k_A 112 TLENNLGEGDVCVFELLRTRDFVLKV 137 (146)
T ss_dssp HHHTTCCTTCEEEEEECSSSSCEEEE
T ss_pred HHHcCCCCCCEEEEEEecCCceEEEE
Confidence 3467899999999999875 324444
No 66
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=51.22 E-value=21 Score=29.82 Aligned_cols=78 Identities=19% Similarity=0.259 Sum_probs=0.0
Q ss_pred ceEeCCEEEEEECCC----CeE----EEeCcc---cCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCC--CCC-CC
Q 030594 42 TFKVGDVLVFNYGGL----HKV----DRVSES---DYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAG--HCP-GG 107 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~----HsV----~~V~~~---~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~--HC~-~G 107 (175)
+++.||++++++.+. +++ +.+... |-..=....++.-..+=...|+++++|+|||-|.... |=. .|
T Consensus 38 ~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~G 117 (339)
T 2zwn_A 38 HVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRG 117 (339)
T ss_dssp EEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSC
T ss_pred EEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCC
Q ss_pred CeEEEEeecCCC
Q 030594 108 MKLAVTVVAASP 119 (175)
Q Consensus 108 mKl~I~V~~~~~ 119 (175)
|.-.+.|.+..+
T Consensus 118 l~G~liV~p~~~ 129 (339)
T 2zwn_A 118 MWGPLIVDPKQP 129 (339)
T ss_dssp CEEEEEEECSSC
T ss_pred ceEeEEecCCCc
No 67
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=46.62 E-value=18 Score=29.13 Aligned_cols=67 Identities=19% Similarity=0.200 Sum_probs=41.7
Q ss_pred CceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCC---CCCeEEEEe
Q 030594 41 KTFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCP---GGMKLAVTV 114 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~---~GmKl~I~V 114 (175)
..+.+|+.++|.-++. |+...-...- ..+.- |- ......++.+++|.||..|+. -|- ..|++.|.|
T Consensus 43 l~lP~g~~V~~~lTS~DViHSF~IP~lgv--K~dai-PG---r~n~l~~~~~~pG~y~g~CsE--~CG~~Hs~M~~~v~v 114 (205)
T 1cyx_A 43 IAFPANTPVYFKVTSNSVMHSFFIPRLGS--QIYAM-AG---MQTRLHLIANEPGTYDGICAE--ICGPGHSGMKFKAIA 114 (205)
T ss_dssp EEEETTSCEEEEEEESSSCEEEEEGGGTE--EEEEC-TT---CCEEEEECCSSSEEEEEEECS--CCSTTSTTCCEEEEE
T ss_pred EEEeCCCEEEEEEecCCceeeEEecccCc--EEEec-CC---ceEEEEEEeCCCeEEEEEccc--ccccchhhceEEEEE
Confidence 4677899999998765 6665421110 00000 00 111135678899999999984 564 469999998
Q ss_pred e
Q 030594 115 V 115 (175)
Q Consensus 115 ~ 115 (175)
.
T Consensus 115 v 115 (205)
T 1cyx_A 115 T 115 (205)
T ss_dssp E
T ss_pred E
Confidence 8
No 68
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=44.37 E-value=13 Score=31.06 Aligned_cols=34 Identities=15% Similarity=0.158 Sum_probs=28.5
Q ss_pred EEEecCCccEEEEcCCCCCC-CCCCeEEEEeecCC
Q 030594 85 RINLKAPGTQYFICPTAGHC-PGGMKLAVTVVAAS 118 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~ 118 (175)
.|+.+++|.|+|.|....|| +.||.-.+.|....
T Consensus 275 ~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 275 EFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp EEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred EEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 56778899999999999998 78998888887554
No 69
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=44.05 E-value=18 Score=29.19 Aligned_cols=67 Identities=15% Similarity=0.148 Sum_probs=38.7
Q ss_pred ceEeCCEEEEEECCC---CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEecCCccEEEEcCCCCCCCC---CCeEEEEee
Q 030594 42 TFKVGDVLVFNYGGL---HKVDRVSESDYNNCASSNALESHDDGNTRINLKAPGTQYFICPTAGHCPG---GMKLAVTVV 115 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~---HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~HC~~---GmKl~I~V~ 115 (175)
.+.+|..++|.-++. |+-..=+..-=....+. ......++.+++|.||..|+. -|-. .|.+.|.|.
T Consensus 143 vlP~~~~Vr~~vtS~DViHsf~vP~lg~K~DaiPG------r~n~~~~~~~~~G~y~g~Cse--~CG~~Hs~M~~~v~vv 214 (227)
T 1v54_B 143 VLPMEMTIRMLVSSEDVLHSWAVPSLGLKTDAIPG------RLNQTTLMSSRPGLYYGQCSE--ICGSNHSFMPIVLELV 214 (227)
T ss_dssp EEETTSCEEEEEEESSSCEEEEEGGGTEEEEECTT------CCEEEEECCSSCEEEEECCCS--CCSTTGGGCCEEEEEE
T ss_pred EEecCCEEEEEEEeCcccceeeecccCcEEEecCC------ceEEEEEecCCcEEEEEEehh--hcccccccCeEEEEEE
Confidence 356677777777654 55543211000001110 011135678999999999984 6754 488888876
Q ss_pred c
Q 030594 116 A 116 (175)
Q Consensus 116 ~ 116 (175)
+
T Consensus 215 ~ 215 (227)
T 1v54_B 215 P 215 (227)
T ss_dssp C
T ss_pred c
Confidence 5
No 70
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=43.69 E-value=53 Score=27.19 Aligned_cols=79 Identities=16% Similarity=0.201 Sum_probs=44.2
Q ss_pred CCceEeCCEEEEEECCC----CeEEEe--Ccc---cCCC-CC-CCCCCCCCCCCCcEEEecCCccEEEEcCCCCC-C--C
Q 030594 40 GKTFKVGDVLVFNYGGL----HKVDRV--SES---DYNN-CA-SSNALESHDDGNTRINLKAPGTQYFICPTAGH-C--P 105 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~----HsV~~V--~~~---~Y~~-C~-~~~~~~~~s~G~~~v~l~~~G~~YFiC~v~~H-C--~ 105 (175)
..+++.||+|++++.+. |++.-- ... ..|. -. ...++.-..+-...|+.+++|++||-|-...+ . .
T Consensus 35 ~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~ 114 (318)
T 3g5w_A 35 LIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQHAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTM 114 (318)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHH
T ss_pred eEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhcc
Confidence 35889999999998654 455331 111 0110 00 00011111111246788899999999876421 1 2
Q ss_pred CCCeEEEEeecCC
Q 030594 106 GGMKLAVTVVAAS 118 (175)
Q Consensus 106 ~GmKl~I~V~~~~ 118 (175)
.||.-.|.|....
T Consensus 115 ~Gl~G~lIV~~~~ 127 (318)
T 3g5w_A 115 RGMWGPLIVEPKN 127 (318)
T ss_dssp SCCEEEEEEECSS
T ss_pred CCCEEEEEEcCCC
Confidence 6998888887543
No 71
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=42.99 E-value=21 Score=29.58 Aligned_cols=36 Identities=11% Similarity=0.044 Sum_probs=28.4
Q ss_pred EEEecCCccEEEEcCCCC-CCCCCCeEEEEeecCCCC
Q 030594 85 RINLKAPGTQYFICPTAG-HCPGGMKLAVTVVAASPP 120 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~-HC~~GmKl~I~V~~~~~~ 120 (175)
.+.++++|.|+|.|.... |=..||.-.|.|.....+
T Consensus 292 ~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~~ 328 (340)
T 2bw4_A 292 FYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWND 328 (340)
T ss_dssp EEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred EEECCCCeeeEEEcCchHHHHhCCCEEEEEECCCCch
Confidence 467788999999998873 557899988999865543
No 72
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=42.92 E-value=9.7 Score=26.55 Aligned_cols=15 Identities=40% Similarity=0.981 Sum_probs=11.8
Q ss_pred CceEeCCEEEEE-ECC
Q 030594 41 KTFKVGDVLVFN-YGG 55 (175)
Q Consensus 41 ~~F~vGDsLvF~-y~~ 55 (175)
+.|++||.|+|+ |..
T Consensus 36 r~~~vGD~l~l~E~~~ 51 (83)
T 3iuw_A 36 RNFQVGDILILEEYMN 51 (83)
T ss_dssp SCCCTTCEEEEEEEET
T ss_pred cCCCCCCEEEEEEccC
Confidence 459999999995 643
No 73
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=38.49 E-value=69 Score=28.53 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=48.0
Q ss_pred CCceEeCCEEEEEECCC-----CeEEE--eCcccCCCCCCCCCC----CCCCCC---CcEEEecCCccEEEEcCCCCCCC
Q 030594 40 GKTFKVGDVLVFNYGGL-----HKVDR--VSESDYNNCASSNAL----ESHDDG---NTRINLKAPGTQYFICPTAGHCP 105 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~-----HsV~~--V~~~~Y~~C~~~~~~----~~~s~G---~~~v~l~~~G~~YFiC~v~~HC~ 105 (175)
..+++.||+|+.++.+. +++.- +.... .....+.- .....| .+.|+++++|+|||-|-...+=.
T Consensus 35 ~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~--~~~~DGv~~vtq~~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~ 112 (552)
T 1aoz_A 35 TIRANAGDSVVVELTNKLHTEGVVIHWHGILQRG--TPWADGTASISQCAINPGETFFYNFTVDNPGTFFYHGHLGMQRS 112 (552)
T ss_dssp CEEEETTCEEEEEEEECCSSCCBCEEEETCCCTT--CGGGSCCBTTTBCCBCTTCEEEEEEECCSCEEEEEEECSTTTGG
T ss_pred cEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCC--CcccCCCcccccCCcCCCCeEEEEEECCCCEEEEEEECchhHHh
Confidence 46889999999998654 33322 11100 00011100 001222 24778889999999999887777
Q ss_pred CCCeEEEEeecCC
Q 030594 106 GGMKLAVTVVAAS 118 (175)
Q Consensus 106 ~GmKl~I~V~~~~ 118 (175)
.||--.|.|....
T Consensus 113 ~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 113 AGLYGSLIVDPPQ 125 (552)
T ss_dssp GTCEEEEEEECCT
T ss_pred ccCeeeEEEeCCc
Confidence 8999999998764
No 74
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=35.53 E-value=1.1e+02 Score=27.08 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=28.5
Q ss_pred cEEEe-cCCccEEEEcCCCCCCCCCCeEEEEeecCC
Q 030594 84 TRINL-KAPGTQYFICPTAGHCPGGMKLAVTVVAAS 118 (175)
Q Consensus 84 ~~v~l-~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~ 118 (175)
+.|++ +++|++||-|-...|=..|+.-.|.|....
T Consensus 96 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 131 (495)
T 3t6v_A 96 YNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPN 131 (495)
T ss_dssp EEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEEeCCCCceeeeeccchhHHhcCceEEEEEcCcc
Confidence 46777 679999999988777778999999997543
No 75
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=35.23 E-value=35 Score=29.75 Aligned_cols=74 Identities=15% Similarity=0.078 Sum_probs=45.7
Q ss_pred CceEeCCEEEEEECCC----CeEEE----eCc--ccCCCCCCCCCCCCCCCCCcEEEecC-CccEEEEcCC----CCCCC
Q 030594 41 KTFKVGDVLVFNYGGL----HKVDR----VSE--SDYNNCASSNALESHDDGNTRINLKA-PGTQYFICPT----AGHCP 105 (175)
Q Consensus 41 ~~F~vGDsLvF~y~~~----HsV~~----V~~--~~Y~~C~~~~~~~~~s~G~~~v~l~~-~G~~YFiC~v----~~HC~ 105 (175)
.+++.||+|+.++.+. +++.- +.. ++...|... -..+=.+.|++++ +|++||-|-. ..|=.
T Consensus 52 i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~----PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~ 127 (451)
T 2uxt_A 52 IRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGPLMGGPARMMS----PNADWAPVLPIRQNAATLWYHANTPNRTAQQVY 127 (451)
T ss_dssp EEEETTCEEEEEEEECSSSCBCEEEETCCCCGGGSCSGGGCBC----TTCEECCEEECCSCSEEEEEEECCTTTHHHHHH
T ss_pred EEEeCCCEEEEEEEECCCCCccEEECCccCCCCCCCCCcCcCC----CCCeEEEEEEcCCCCcceEEecCCCCchhhhHh
Confidence 4688999999999765 44422 111 111112211 1111125788886 8999999987 33555
Q ss_pred CCCeEEEEeecCC
Q 030594 106 GGMKLAVTVVAAS 118 (175)
Q Consensus 106 ~GmKl~I~V~~~~ 118 (175)
.||--.+.|....
T Consensus 128 ~Gl~G~liV~~~~ 140 (451)
T 2uxt_A 128 NGLAGMWLVEDEV 140 (451)
T ss_dssp TTCEEEEEEECHH
T ss_pred hcceEEEEEecCc
Confidence 8999999888654
No 76
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=34.62 E-value=68 Score=28.62 Aligned_cols=77 Identities=14% Similarity=0.163 Sum_probs=47.9
Q ss_pred CCceEeCCEEEEEECCC-C----eEEE--eCcccCCCCCCCC-------CCCCCCCCCcEEEec-CCccEEEEcCCCCCC
Q 030594 40 GKTFKVGDVLVFNYGGL-H----KVDR--VSESDYNNCASSN-------ALESHDDGNTRINLK-APGTQYFICPTAGHC 104 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~-H----sV~~--V~~~~Y~~C~~~~-------~~~~~s~G~~~v~l~-~~G~~YFiC~v~~HC 104 (175)
..+++.||+|+.++.+. . ++.- +.+. ......+ ++.-..+=.+.|+++ +.|+|||-|-...|=
T Consensus 35 ~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~--~~~~~DG~~~vtq~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~ 112 (534)
T 1zpu_A 35 DITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQN--GTASMDGVPFLTQCPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQY 112 (534)
T ss_dssp CEEEETTCEEEEEEECCCSSCCBCCEEETCCCT--TCGGGSCCBTTTBCCBCTTCEEEEEEECSSCCEEEEEECCSSSGG
T ss_pred cEEEECCCEEEEEEEeCCCCCCeeEEcCCcccC--CCCcccCCCccccCCcCCCCeEEEEEEeCccceeEEEEEcCcccc
Confidence 46899999999999765 3 2221 1100 0011111 111111112467777 889999999988877
Q ss_pred CCCCeEEEEeecCC
Q 030594 105 PGGMKLAVTVVAAS 118 (175)
Q Consensus 105 ~~GmKl~I~V~~~~ 118 (175)
..||.-.+.|....
T Consensus 113 ~~Gl~G~liV~~~~ 126 (534)
T 1zpu_A 113 EDGMKGLFIIKDDS 126 (534)
T ss_dssp GGTCEEEEEEECTT
T ss_pred cCcceeeEEeCCCC
Confidence 78999999998764
No 77
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=33.84 E-value=24 Score=30.32 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=29.3
Q ss_pred EEEecCCccEEEEcCCCCCC-CCCCeEEEEeecCCC
Q 030594 85 RINLKAPGTQYFICPTAGHC-PGGMKLAVTVVAASP 119 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC-~~GmKl~I~V~~~~~ 119 (175)
.++++++|.|+|.|....|+ ..||...+.|.....
T Consensus 265 ~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 265 EFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp EEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred EEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 56778899999999988887 789988888876654
No 78
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=33.76 E-value=66 Score=29.36 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=28.7
Q ss_pred cEEEecCCccEEEEcCCCCCCCCCCeEEEEeecC
Q 030594 84 TRINLKAPGTQYFICPTAGHCPGGMKLAVTVVAA 117 (175)
Q Consensus 84 ~~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~~~ 117 (175)
++|+++++|+|||-|-.+.|=..|+.-.|.|...
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 5788889999999998877777899888888754
No 79
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=33.17 E-value=21 Score=32.57 Aligned_cols=33 Identities=15% Similarity=0.183 Sum_probs=29.0
Q ss_pred EEEecCCccEEEEcCCCCCCCCCCeEEEEeecC
Q 030594 85 RINLKAPGTQYFICPTAGHCPGGMKLAVTVVAA 117 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~~~ 117 (175)
.+..+++|.+.|.|-+..|-..||...+.|...
T Consensus 296 ~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~~ 328 (647)
T 1sdd_B 296 EMKASKPGWWLLDTEVGEIQRAGMQTPFLIVDR 328 (647)
T ss_dssp EEECCSSEEEEEECCCHHHHTTTCEEEEEEECT
T ss_pred EEEeccceEeecccCcccccccccccceeeecc
Confidence 456788999999999999999999999999753
No 80
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=31.83 E-value=25 Score=28.48 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=27.4
Q ss_pred CCccEEEEcCCCCCCCCCCeEEEEeecCCCC
Q 030594 90 APGTQYFICPTAGHCPGGMKLAVTVVAASPP 120 (175)
Q Consensus 90 ~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 120 (175)
.+|.++|-|-+..|=..||...+.|.....+
T Consensus 239 npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 239 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 5899999999999999999999999887543
No 81
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=31.55 E-value=1.4e+02 Score=26.47 Aligned_cols=35 Identities=11% Similarity=0.212 Sum_probs=28.4
Q ss_pred cEEEe-cCCccEEEEcCCCCCCCCCCeEEEEeecCC
Q 030594 84 TRINL-KAPGTQYFICPTAGHCPGGMKLAVTVVAAS 118 (175)
Q Consensus 84 ~~v~l-~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~ 118 (175)
+.|++ +++|+|||-|-...|=..|+.-.|.|....
T Consensus 95 Y~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~ 130 (499)
T 3pxl_A 95 YDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPN 130 (499)
T ss_dssp EEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTT
T ss_pred EEEEcCCCCceeeeeccchhHHhccceeEEEEcCCc
Confidence 46777 679999999988777778999999997543
No 82
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=30.79 E-value=20 Score=25.28 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=23.4
Q ss_pred EEEecCCCCCcCCCCcccccCCCceEeCCEEEEE
Q 030594 19 EYTVGDTSGWTQGFDYTSWVSGKTFKVGDVLVFN 52 (175)
Q Consensus 19 ~~~VGg~~GWt~~~~Y~~Wa~~~~F~vGDsLvF~ 52 (175)
+.++||+.| . ...+.|-+. |+.||.+.++
T Consensus 41 ~~~l~DeTG-~--I~~tlW~~~--l~~Gdvv~i~ 69 (106)
T 2k75_A 41 QGYIEDDTA-R--IRISSFGKQ--LQDSDVVRID 69 (106)
T ss_dssp EEEEECSSC-E--EEEEEESSC--CCTTEEEEEE
T ss_pred EEEEEcCCC-e--EEEEEEcCc--cCCCCEEEEE
Confidence 468899887 3 346788877 9999999998
No 83
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=30.03 E-value=62 Score=27.88 Aligned_cols=75 Identities=11% Similarity=0.092 Sum_probs=0.0
Q ss_pred ceEeCCEEEEEECCC-CeEEEe-CcccCCCCCCCCCCCCCCCCCc---EEEe--cCCccEEEEcCCCC----CCCCCCeE
Q 030594 42 TFKVGDVLVFNYGGL-HKVDRV-SESDYNNCASSNALESHDDGNT---RINL--KAPGTQYFICPTAG----HCPGGMKL 110 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~-HsV~~V-~~~~Y~~C~~~~~~~~~s~G~~---~v~l--~~~G~~YFiC~v~~----HC~~GmKl 110 (175)
+++.||+|+.++.+. ..-+.+ -..-...-...+.......|.. .|++ +++|++||-|-..+ |=..||.-
T Consensus 50 ~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G 129 (439)
T 2xu9_A 50 RVRPRDTVRLTLENRLPEPTNLHWHGLPISPKVDDPFLEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLG 129 (439)
T ss_dssp EECTTCEEEEEEEECSSSCBCCEEETCCCCTTTSCTTCCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCE
T ss_pred EEeCCCEEEEEEEECCCCCcceEeCCCCCCccccCCcccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeE
Q ss_pred EEEeec
Q 030594 111 AVTVVA 116 (175)
Q Consensus 111 ~I~V~~ 116 (175)
.+.|..
T Consensus 130 ~liV~~ 135 (439)
T 2xu9_A 130 ALVVES 135 (439)
T ss_dssp EEEECC
T ss_pred EEEEcC
No 84
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=29.97 E-value=64 Score=26.40 Aligned_cols=35 Identities=6% Similarity=-0.031 Sum_probs=25.0
Q ss_pred cEEEecCC----------ccEEEEcCCCC--CCCCCCeEEEEeecCC
Q 030594 84 TRINLKAP----------GTQYFICPTAG--HCPGGMKLAVTVVAAS 118 (175)
Q Consensus 84 ~~v~l~~~----------G~~YFiC~v~~--HC~~GmKl~I~V~~~~ 118 (175)
..|++++. |++||-|-... |-..|+.-.|.|....
T Consensus 122 Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~ 168 (306)
T 1sdd_A 122 YEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKG 168 (306)
T ss_dssp EEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTT
T ss_pred EEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCC
Confidence 46666554 79999997654 4457998888887653
No 85
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=29.33 E-value=99 Score=25.36 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=20.2
Q ss_pred CCccEEEEcCCCCC------CCCCCeEEEEeecCC
Q 030594 90 APGTQYFICPTAGH------CPGGMKLAVTVVAAS 118 (175)
Q Consensus 90 ~~G~~YFiC~v~~H------C~~GmKl~I~V~~~~ 118 (175)
..|+|||-|-+... =..||--.|.|....
T Consensus 114 ~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 148 (313)
T 3tas_A 114 SAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 148 (313)
T ss_dssp SCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CceEEEEeecCcccccchhhhhccccCceEeeccc
Confidence 45889998876443 236888888887654
No 86
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=28.86 E-value=19 Score=24.86 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=16.7
Q ss_pred ccccCCCceEeCCEEEEEECCC
Q 030594 35 TSWVSGKTFKVGDVLVFNYGGL 56 (175)
Q Consensus 35 ~~Wa~~~~F~vGDsLvF~y~~~ 56 (175)
.+.+.-..+++||.|.|.+...
T Consensus 54 ~~~~~l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 54 TPQTKMSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp CTTCEECCCCTTCEEEEEEEEE
T ss_pred CChhhhhcCCCCCEEEEEEEEe
Confidence 3444456899999999999744
No 87
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=28.81 E-value=19 Score=24.35 Aligned_cols=19 Identities=26% Similarity=0.392 Sum_probs=14.9
Q ss_pred cCCCceEeCCEEEEEECCC
Q 030594 38 VSGKTFKVGDVLVFNYGGL 56 (175)
Q Consensus 38 a~~~~F~vGDsLvF~y~~~ 56 (175)
+.-..+++||.|.|.+...
T Consensus 49 ~~l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 49 TKMSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp CEECCCCTTCEEEEEEEEE
T ss_pred hhhhcCCCCCEEEEEEEEe
Confidence 3345799999999999744
No 88
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=28.07 E-value=32 Score=32.49 Aligned_cols=29 Identities=7% Similarity=-0.035 Sum_probs=23.7
Q ss_pred CCccEEEEcCCCC--CCCCCCeEEEEeecCC
Q 030594 90 APGTQYFICPTAG--HCPGGMKLAVTVVAAS 118 (175)
Q Consensus 90 ~~G~~YFiC~v~~--HC~~GmKl~I~V~~~~ 118 (175)
.+|++||-|.+.. |...||.-.|.|....
T Consensus 269 ~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 269 DCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred CCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 6799999998765 6778999888888654
No 89
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=27.99 E-value=13 Score=27.08 Aligned_cols=12 Identities=50% Similarity=0.880 Sum_probs=10.3
Q ss_pred CceEeCCEEEEE
Q 030594 41 KTFKVGDVLVFN 52 (175)
Q Consensus 41 ~~F~vGDsLvF~ 52 (175)
+.+++||.|+|+
T Consensus 33 ~~i~vGD~I~f~ 44 (113)
T 1xne_A 33 KDIKRGDKIIFN 44 (113)
T ss_dssp TTCCTTCEEEET
T ss_pred hccCCCCEEEEc
Confidence 468999999994
No 90
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=27.28 E-value=40 Score=28.84 Aligned_cols=34 Identities=9% Similarity=0.110 Sum_probs=28.6
Q ss_pred EEEecCCccEEEEcCCCCCCCCCCeEEEEeecCC
Q 030594 85 RINLKAPGTQYFICPTAGHCPGGMKLAVTVVAAS 118 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~ 118 (175)
.|..+++|.++|-|-...|=..||...+.|....
T Consensus 402 ~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 402 DFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp EEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred EEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 5567889999999999889778999999987554
No 91
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=26.49 E-value=26 Score=28.90 Aligned_cols=32 Identities=25% Similarity=0.331 Sum_probs=27.9
Q ss_pred cCCccEEEEcCCCCCCCCCCeEEEEeecCCCC
Q 030594 89 KAPGTQYFICPTAGHCPGGMKLAVTVVAASPP 120 (175)
Q Consensus 89 ~~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 120 (175)
+.||.+.|-|-+..|=++||...++|.....+
T Consensus 260 dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~~ 291 (299)
T 3t9w_A 260 VGPGMWMYHCHVQNHSDMGMAGMFLVRNADGT 291 (299)
T ss_dssp TCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCeeEEEEcCCHHHHhcCCeEEEEEECCCCC
Confidence 35899999999999999999999999877654
No 92
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=26.08 E-value=71 Score=26.25 Aligned_cols=31 Identities=19% Similarity=0.254 Sum_probs=27.3
Q ss_pred CCccEEEEcCCCCCCCCCCeEEEEeecCCCC
Q 030594 90 APGTQYFICPTAGHCPGGMKLAVTVVAASPP 120 (175)
Q Consensus 90 ~~G~~YFiC~v~~HC~~GmKl~I~V~~~~~~ 120 (175)
.||.+.|-|-+..|=..||.-.++|......
T Consensus 245 nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~~ 275 (313)
T 3tas_A 245 GAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 275 (313)
T ss_dssp CSEEEEEEECSHHHHHTTCEEEEEEECTTCC
T ss_pred CCEeEEEEeCChHHHHCCCeEEEEEECCCCC
Confidence 5899999999999999999999999877654
No 93
>1w0n_A Endo-1,4-beta-xylanase D; hydrolase, carbohydrate-binding module, carbohydrate binding, CBM36; 0.8A {Paenibacillus polymyxa} SCOP: b.18.1.28 PDB: 1ux7_A
Probab=24.92 E-value=1.4e+02 Score=22.31 Aligned_cols=63 Identities=14% Similarity=0.343 Sum_probs=37.7
Q ss_pred eCCEEEEE--ECCC-CeEEEeCcccCCCCCCCCCCCCCCCCCcEEEec----CCccEEEEcCCC--------CCCCCCCe
Q 030594 45 VGDVLVFN--YGGL-HKVDRVSESDYNNCASSNALESHDDGNTRINLK----APGTQYFICPTA--------GHCPGGMK 109 (175)
Q Consensus 45 vGDsLvF~--y~~~-HsV~~V~~~~Y~~C~~~~~~~~~s~G~~~v~l~----~~G~~YFiC~v~--------~HC~~GmK 109 (175)
-||.++|+ |..+ |++-. .-|...+.. .+|.|. +.|++||--.++ .|-..-|+
T Consensus 42 n~D~~~~~~nFa~~~~sfsl------RgasnNsn~-------A~VdLrigg~~~GTfy~~gt~P~v~t~nnv~~~tg~q~ 108 (131)
T 1w0n_A 42 NADYVSYSQYFANSTHNISV------RGASSNAGT-------AKVDLVIGGVTVGSFNFTGKTPTVQTLSNITHATGDQE 108 (131)
T ss_dssp TTCEEEEEEEESSSEEEEEE------EEEESSSSE-------EEEEEEETTEEEEEEEEESSSCEEEEEEEEECCCEEEE
T ss_pred cCCEEEEEEEeccccceEEE------EeccCCCCc-------eEEEEEeCCeeeEEEEeccccceeeeeccccccCCceE
Confidence 47999887 4455 77632 124433222 233332 357888887766 24444589
Q ss_pred EEEEeecCCCC
Q 030594 110 LAVTVVAASPP 120 (175)
Q Consensus 110 l~I~V~~~~~~ 120 (175)
+.+.|.++...
T Consensus 109 vel~vT~dnGt 119 (131)
T 1w0n_A 109 IKLALTSDDGT 119 (131)
T ss_dssp EEEEESCSSSS
T ss_pred EEEEEECCCCc
Confidence 99999877653
No 94
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=23.71 E-value=92 Score=27.57 Aligned_cols=77 Identities=10% Similarity=0.090 Sum_probs=0.0
Q ss_pred ceEeCCEEEEEECCC-C-----eEEEe-CcccCC--CCCCCCC-------CCCCCCCCcEEE-ecCCccEEEEcCCCCCC
Q 030594 42 TFKVGDVLVFNYGGL-H-----KVDRV-SESDYN--NCASSNA-------LESHDDGNTRIN-LKAPGTQYFICPTAGHC 104 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~-H-----sV~~V-~~~~Y~--~C~~~~~-------~~~~s~G~~~v~-l~~~G~~YFiC~v~~HC 104 (175)
+++.||+|+.++.+. . .-+.+ -..-.. .....+. +.-..+=.+.|+ .+++|+|||-|-...|=
T Consensus 58 ~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~ 137 (521)
T 1v10_A 58 TGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQY 137 (521)
T ss_dssp EEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGG
T ss_pred EEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCch
Q ss_pred CCCCeEEEEeecCC
Q 030594 105 PGGMKLAVTVVAAS 118 (175)
Q Consensus 105 ~~GmKl~I~V~~~~ 118 (175)
..||--.+.|....
T Consensus 138 ~~Gl~G~liV~~~~ 151 (521)
T 1v10_A 138 CDGLRGAFVVYDPN 151 (521)
T ss_dssp GGTCEEEEEEECTT
T ss_pred hcCceEEEEEcCCc
No 95
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=23.43 E-value=60 Score=26.84 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=27.0
Q ss_pred EEEecCCccEEEEcCCCCCCC------CCCeEEEEeecCC
Q 030594 85 RINLKAPGTQYFICPTAGHCP------GGMKLAVTVVAAS 118 (175)
Q Consensus 85 ~v~l~~~G~~YFiC~v~~HC~------~GmKl~I~V~~~~ 118 (175)
.+..+.||.+.|-|-+..|-. .||...|.+....
T Consensus 239 ~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 239 ILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 567788999999999999998 4677777776544
No 96
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=22.77 E-value=33 Score=29.88 Aligned_cols=76 Identities=14% Similarity=0.065 Sum_probs=45.2
Q ss_pred CCceEeCCEEEEEECCC----CeEEE----eC-c-ccCCCCCCCCCCCCCCCCCcEEEec-CCccEEEEcCC----CCCC
Q 030594 40 GKTFKVGDVLVFNYGGL----HKVDR----VS-E-SDYNNCASSNALESHDDGNTRINLK-APGTQYFICPT----AGHC 104 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~----HsV~~----V~-~-~~Y~~C~~~~~~~~~s~G~~~v~l~-~~G~~YFiC~v----~~HC 104 (175)
..+++.||+|+.++.+. +++.. +. . +....|... -..+=.+.|++. ++|++||-|-. ..|=
T Consensus 39 ~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~~DG~~~~~i~----PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~ 114 (448)
T 3aw5_A 39 TIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNWHNDAHPSFAIT----PGESYNYSFDVVNRAGTYLYHPHPHGLTAKQF 114 (448)
T ss_dssp EEEEETTCEEEEEEEECSSSCBCEEEETCCCCHHHHTCGGGCBC----TTCEEEEEEECCSCSEEEEEEECCTTTHHHHH
T ss_pred eEEEeCCCEEEEEEEECCCCceeEEeCCccCCCccCCCCCccCC----CCCEEEEEEEcCCCCCceEeccCCCCchHHHH
Confidence 35688999999999765 33322 11 0 000112221 111112467777 78999999973 2344
Q ss_pred CCCCeEEEEeecCCC
Q 030594 105 PGGMKLAVTVVAASP 119 (175)
Q Consensus 105 ~~GmKl~I~V~~~~~ 119 (175)
..||--.+.|.....
T Consensus 115 ~~Gl~G~liV~~~~~ 129 (448)
T 3aw5_A 115 YMGQLGLVIVEDSGS 129 (448)
T ss_dssp HTTCCEEEEEECTTT
T ss_pred hccceEEEEEeCCcc
Confidence 589999999987543
No 97
>2hzs_I RNA polymerase II mediator complex subunit 8; beta barrel, channel, helix, transcription; 2.70A {Saccharomyces cerevisiae}
Probab=21.85 E-value=0.79 Score=25.17 Aligned_cols=17 Identities=47% Similarity=0.798 Sum_probs=13.1
Q ss_pred CCceEeCCEEEEEECCC
Q 030594 40 GKTFKVGDVLVFNYGGL 56 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~ 56 (175)
.+.|.|.|.|.|.|...
T Consensus 4 skpfnvddvlkftftge 20 (27)
T 2hzs_I 4 SKPFNVDDVLKFTFTGE 20 (27)
T ss_dssp --CCCHHHHHHHHHHCC
T ss_pred CCCcChhheEEEEeccc
Confidence 46888999999999876
No 98
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=21.83 E-value=30 Score=25.02 Aligned_cols=11 Identities=36% Similarity=0.981 Sum_probs=9.9
Q ss_pred CceEeCCEEEE
Q 030594 41 KTFKVGDVLVF 51 (175)
Q Consensus 41 ~~F~vGDsLvF 51 (175)
+.+++||.|+|
T Consensus 32 ~~ikvGD~I~f 42 (109)
T 2z0t_A 32 RQIKPGDIIIF 42 (109)
T ss_dssp GGCCTTCEEEE
T ss_pred hcCCCCCEEEE
Confidence 47899999999
No 99
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=21.42 E-value=1e+02 Score=27.31 Aligned_cols=79 Identities=13% Similarity=0.122 Sum_probs=0.0
Q ss_pred ceEeCCEEEEEECCC----CeEEE--eCcccCCCCCCCCCCCCCCCCCcEEEecC--CccEEEEcCC----CCCCCCCCe
Q 030594 42 TFKVGDVLVFNYGGL----HKVDR--VSESDYNNCASSNALESHDDGNTRINLKA--PGTQYFICPT----AGHCPGGMK 109 (175)
Q Consensus 42 ~F~vGDsLvF~y~~~----HsV~~--V~~~~Y~~C~~~~~~~~~s~G~~~v~l~~--~G~~YFiC~v----~~HC~~GmK 109 (175)
+++.||.|+.++.+. ++|.- +.......=....++.-..+=.+.|++.+ +|+|||-|-. ..|=..|+-
T Consensus 85 r~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~pq~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~ 164 (481)
T 3zx1_A 85 EVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLA 164 (481)
T ss_dssp EEETTCEEEEEEEECSSSCBCCEEETCCCCGGGSCCTTSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCC
T ss_pred EEECCcEEEEEEEeCCCCCeeEEecCcccCCccCCCccCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccce
Q ss_pred EEEEeecCCCC
Q 030594 110 LAVTVVAASPP 120 (175)
Q Consensus 110 l~I~V~~~~~~ 120 (175)
-.+.|......
T Consensus 165 G~lIV~~~~~~ 175 (481)
T 3zx1_A 165 GAFVIKAKKDA 175 (481)
T ss_dssp EEEEEECSSCT
T ss_pred EEEEEcCcccc
No 100
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=20.54 E-value=78 Score=21.17 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=28.0
Q ss_pred CCceEeCCEEEEEECCCCeEEEeCcccCCCCCCCCCC--CCCCCCCcEEEec
Q 030594 40 GKTFKVGDVLVFNYGGLHKVDRVSESDYNNCASSNAL--ESHDDGNTRINLK 89 (175)
Q Consensus 40 ~~~F~vGDsLvF~y~~~HsV~~V~~~~Y~~C~~~~~~--~~~s~G~~~v~l~ 89 (175)
..+|++||++.=+|...+.-+++.-..++ ..+++ -.|.+| +..+|.
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSit---s~~~~Y~VkfKdg-T~e~L~ 57 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHD---STSQLYTVKYKDG-TELELK 57 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEE---TTTTEEEEECTTS-CEEEEE
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEec---cCCceEEEEecCC-CEEEec
Confidence 46899999999999933666665333333 44453 345563 444444
No 101
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=20.29 E-value=44 Score=22.68 Aligned_cols=23 Identities=17% Similarity=0.121 Sum_probs=17.7
Q ss_pred cccccCCCceEeCCEEEEEECCC
Q 030594 34 YTSWVSGKTFKVGDVLVFNYGGL 56 (175)
Q Consensus 34 Y~~Wa~~~~F~vGDsLvF~y~~~ 56 (175)
..+.+.-..+++||.|.|.+...
T Consensus 39 v~~~~~l~~lk~Gd~V~F~~~~~ 61 (82)
T 2l55_A 39 APPAGLPQGLKAGDRVAFSFRLD 61 (82)
T ss_dssp CCTTCCCSSCSTTCEEEEEEEEE
T ss_pred cCChhHhhcCCCCCEEEEEEEEC
Confidence 34455567899999999999754
Done!