Your job contains 1 sequence.
>030598
MADTKFNNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREH
DPLGRDVELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNS
FLRTAGIDSLVIVGVQTPNCIRQTVFDAVELDYKSITIIVDATAAATPEIHAGM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030598
(174 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2094927 - symbol:AT3G16190 species:3702 "Arabi... 562 2.1e-54 1
TIGR_CMR|CHY_0679 - symbol:CHY_0679 "isochorismatase fami... 201 3.7e-16 1
TIGR_CMR|SPO_1471 - symbol:SPO_1471 "isochorismatase fami... 153 4.5e-11 1
UNIPROTKB|P75897 - symbol:rutB "peroxyureidoacrylate / ur... 138 2.2e-09 1
TIGR_CMR|BA_3315 - symbol:BA_3315 "isochorismatase family... 137 2.2e-09 1
DICTYBASE|DDB_G0271336 - symbol:DDB_G0271336 species:4468... 136 2.9e-09 1
UNIPROTKB|Q88FY5 - symbol:nicF "Maleamate amidohydrolase"... 134 4.7e-09 1
TIGR_CMR|BA_0016 - symbol:BA_0016 "isochorismatase family... 132 7.6e-09 1
TIGR_CMR|SPO_1828 - symbol:SPO_1828 "isochorismatase fami... 126 4.1e-08 1
UNIPROTKB|Q50575 - symbol:pncA "Pyrazinamidase/nicotinami... 120 1.4e-07 1
ASPGD|ASPL0000002190 - symbol:AN6124 species:162425 "Emer... 126 2.1e-07 1
TIGR_CMR|CPS_0771 - symbol:CPS_0771 "isochorismatase fami... 122 3.9e-07 1
TIGR_CMR|SPO_3572 - symbol:SPO_3572 "isochorismatase fami... 117 5.8e-07 1
UNIPROTKB|Q9KLN1 - symbol:VC_A0712 "Pyrazinamidase/nicoti... 90 3.3e-06 2
TIGR_CMR|VC_A0712 - symbol:VC_A0712 "pyrazinamidase/nicot... 90 3.3e-06 2
UNIPROTKB|P21369 - symbol:pncA "pyrazinamidase / nicotina... 94 7.9e-06 2
TIGR_CMR|BA_2963 - symbol:BA_2963 "isochorismatase family... 96 3.3e-05 2
SGD|S000003005 - symbol:PNC1 "Nicotinamidase that convert... 79 3.9e-05 2
DICTYBASE|DDB_G0295669 - symbol:DDB_G0295669 "isochorisma... 108 4.3e-05 1
TAIR|locus:2166948 - symbol:NIC3 "nicotinamidase 3" speci... 109 4.4e-05 1
TIGR_CMR|GSU_2290 - symbol:GSU_2290 "pyrazinamidase/nicot... 108 6.4e-05 1
TIGR_CMR|SPO_3580 - symbol:SPO_3580 "isochorismatase fami... 107 0.00011 1
UNIPROTKB|P0ADI4 - symbol:entB species:83333 "Escherichia... 108 0.00016 1
UNIPROTKB|G4MQX0 - symbol:MGG_04726 "Isochorismatase fami... 81 0.00032 2
TAIR|locus:2166958 - symbol:NIC2 "nicotinamidase 2" speci... 103 0.00034 1
TIGR_CMR|GSU_0569 - symbol:GSU_0569 "isochorismatase fami... 100 0.00067 1
TIGR_CMR|BA_2371 - symbol:BA_2371 "isochorismatase" speci... 104 0.00068 1
UNIPROTKB|P0ADI7 - symbol:yecD "predicted hydrolase" spec... 100 0.00076 1
TIGR_CMR|VC_0771 - symbol:VC_0771 "vibriobactin-specific ... 103 0.00091 1
>TAIR|locus:2094927 [details] [associations]
symbol:AT3G16190 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008152 "metabolic process"
evidence=IEA;ISS] InterPro:IPR000868 Pfam:PF00857 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016787 Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 HOGENOM:HOG000078668 HSSP:O58727
EMBL:AY058125 EMBL:AY086380 EMBL:AY143919 IPI:IPI00522135
RefSeq:NP_566539.1 UniGene:At.21500 ProteinModelPortal:Q93Z51
SMR:Q93Z51 IntAct:Q93Z51 STRING:Q93Z51 PaxDb:Q93Z51 PRIDE:Q93Z51
EnsemblPlants:AT3G16190.1 GeneID:820865 KEGG:ath:AT3G16190
TAIR:At3g16190 InParanoid:Q93Z51 OMA:NFPNCPR PhylomeDB:Q93Z51
ProtClustDB:CLSN2688438 Genevestigator:Q93Z51 Uniprot:Q93Z51
Length = 196
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 112/172 (65%), Positives = 134/172 (77%)
Query: 1 MADTKFNNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREH 60
MA+ ++ NTALLVIDMQNDFI + + +V GGK+IVPNVI+ VE+ARQ GILV+WVVREH
Sbjct: 1 MAE-RWRNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREH 59
Query: 61 DPLGRDVELFRQHLYSTGTVGPTSKGSPGAELVDGLEI-KEGDYKVVKMRFSAFFATHLN 119
D GRDVELFR+H YS+ VGP KG+ GAELVDGL I +E DYK+VK RFSAFF+T+L+
Sbjct: 60 DRQGRDVELFRRHNYSSEKVGPVIKGTVGAELVDGLMINEEDDYKIVKTRFSAFFSTNLH 119
Query: 120 SFLRTAGIDSLVIVGVQTPNCIRQTVFDAVELDYKSXXXXXXXXXXXXPEIH 171
SFL+T+G+ LVI GVQTPNCIRQTVFDAV LDY + PEIH
Sbjct: 120 SFLQTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIH 171
>TIGR_CMR|CHY_0679 [details] [associations]
symbol:CHY_0679 "isochorismatase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=ISS] InterPro:IPR000868 Pfam:PF00857
GO:GO:0003824 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
HOGENOM:HOG000078666 RefSeq:YP_359534.1 ProteinModelPortal:Q3AEA0
STRING:Q3AEA0 GeneID:3728153 KEGG:chy:CHY_0679 PATRIC:21274491
OMA:ENLICCG ProtClustDB:CLSK941315
BioCyc:CHYD246194:GJCN-679-MONOMER Uniprot:Q3AEA0
Length = 191
Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 55/147 (37%), Positives = 78/147 (53%)
Query: 5 KFNNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLG 64
K + +++IDM NDFI + +R G+ IVPN+ K VE A ++GI VV+V H
Sbjct: 2 KGDRHCIVIIDMLNDFIGPNAPLRCPDGEKIVPNLQKLVEFAHENGINVVFVQEAHRKND 61
Query: 65 RDVELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKE--GDYKVVKMRFSAFFATHLNSFL 122
D + H KG+ G++ + L E GDY V K R SAF T L+ +L
Sbjct: 62 ADFRVRPVHAV---------KGTWGSDFIPELRPDEEKGDYIVQKRRHSAFAYTDLDLYL 112
Query: 123 RTAGIDSLVIVGVQTPNCIRQTVFDAV 149
R ID++V+ GV T C+R T DA+
Sbjct: 113 REEKIDTVVVTGVWTNVCVRSTASDAL 139
>TIGR_CMR|SPO_1471 [details] [associations]
symbol:SPO_1471 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 RefSeq:YP_166712.1
ProteinModelPortal:Q5LTE3 GeneID:3195693 KEGG:sil:SPO1471
PATRIC:23376259 OMA:SICVESS ProtClustDB:CLSK933561 Uniprot:Q5LTE3
Length = 206
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 54/159 (33%), Positives = 74/159 (46%)
Query: 1 MADTK---FNNTALLVIDMQNDFILDDGLM-RVDGGKAIV---P-NVIKAVEIARQHGIL 52
M+D K TALL ID+QNDF+ +G R G A + P + V R G L
Sbjct: 1 MSDPKTWTLAQTALLTIDLQNDFLHPEGAYGRAGQGAAAIAALPARIAPLVAALRAKGGL 60
Query: 53 VVWVVREHDPLGRDVELFRQHLYSTG---TVGPTSKGSPGAELVDGLEIKEGDYKVVKMR 109
+ P R L HL + T G + GS G +LVD L+ D+ V K+
Sbjct: 61 YISAQFTLVPGPRGEPLISPHLKALRPFLTRGDFAPGSFGHQLVDALQ--PADFTVEKVA 118
Query: 110 FSAFFATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDA 148
+SAF+ T L LR GI L++ G+ T + T+ DA
Sbjct: 119 YSAFYQTRLEYILRAMGIRQLIVGGIVTNGGVASTLRDA 157
>UNIPROTKB|P75897 [details] [associations]
symbol:rutB "peroxyureidoacrylate / ureidoacrylate amido
hydrolase" species:83333 "Escherichia coli K-12" [GO:0016811
"hydrolase activity, acting on carbon-nitrogen (but not peptide)
bonds, in linear amides" evidence=IEA;IDA] [GO:0006212 "uracil
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=IMP] [GO:0019740 "nitrogen utilization"
evidence=IMP] HAMAP:MF_00830 InterPro:IPR000868 InterPro:IPR019916
Pfam:PF00857 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016811 GO:GO:0019740 GO:GO:0006212
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335 PIR:A64843
RefSeq:NP_415531.2 RefSeq:YP_489284.1 ProteinModelPortal:P75897
SMR:P75897 DIP:DIP-28106N PRIDE:P75897
EnsemblBacteria:EBESCT00000003324 EnsemblBacteria:EBESCT00000016330
GeneID:12933003 GeneID:945699 KEGG:ecj:Y75_p0984 KEGG:eco:b1011
PATRIC:32117251 EchoBASE:EB3618 EcoGene:EG13858
HOGENOM:HOG000078669 KO:K09020 OMA:MQNAYAS ProtClustDB:CLSK879924
BioCyc:EcoCyc:G6522-MONOMER BioCyc:ECOL316407:JW5139-MONOMER
BioCyc:MetaCyc:G6522-MONOMER Genevestigator:P75897
TIGRFAMs:TIGR03614 Uniprot:P75897
Length = 230
Score = 138 (53.6 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 43/133 (32%), Positives = 63/133 (47%)
Query: 33 KAIVPNVIKAVEIARQHGILVVWVVREHDPL-----GRDVELF-RQHLYSTGTVGPT--- 83
+ ++ N+ AV AR G+L++W D G F + + T P
Sbjct: 47 RPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQG 106
Query: 84 ---SKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGIDSLVIVGVQTPNC 140
+KGS +LVD L + GD + K R+S FF T L+S LR+ GI LV G+ T C
Sbjct: 107 KLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTGIATNVC 166
Query: 141 IRQTVFDAVELDY 153
+ T+ D L+Y
Sbjct: 167 VESTLRDGFFLEY 179
>TIGR_CMR|BA_3315 [details] [associations]
symbol:BA_3315 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 RefSeq:NP_845603.1
RefSeq:YP_019949.1 RefSeq:YP_029329.1 ProteinModelPortal:Q81NA0
DNASU:1088502 EnsemblBacteria:EBBACT00000008316
EnsemblBacteria:EBBACT00000015234 EnsemblBacteria:EBBACT00000019862
GeneID:1088502 GeneID:2816812 GeneID:2848885 KEGG:ban:BA_3315
KEGG:bar:GBAA_3315 KEGG:bat:BAS3072 HOGENOM:HOG000093890
OMA:NTMREND ProtClustDB:CLSK584524
BioCyc:BANT260799:GJAJ-3134-MONOMER
BioCyc:BANT261594:GJ7F-3243-MONOMER Uniprot:Q81NA0
Length = 193
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVW---VVREHDPLGRD 66
A+L D+Q D + + R+ +A P ++ ++ R++ + ++ + E DP
Sbjct: 4 AVLTNDLQYDLV-NKNEDRIAAVEAFTPKMVSFLDTMRENDVSIIHLQLINLEDDP---- 58
Query: 67 VELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAG 126
+ Y G P +KGS GAE++ + E D + K + S FF T+L+ L+ G
Sbjct: 59 ----KAERY--GDFLPVTKGSKGAEILPEF-LHEKDIIMEKNKDSGFFETNLDETLKKLG 111
Query: 127 IDSLVIVGVQTPNCIRQTVFD 147
+D+++I G+QT C++ T D
Sbjct: 112 VDTIIITGMQTQICVQTTAAD 132
>DICTYBASE|DDB_G0271336 [details] [associations]
symbol:DDB_G0271336 species:44689 "Dictyostelium
discoideum" [GO:0008152 "metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 dictyBase:DDB_G0271336 GO:GO:0003824 EMBL:AAFI02000006
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
RefSeq:XP_645638.1 ProteinModelPortal:Q55BH4 STRING:Q55BH4
EnsemblProtists:DDB0202872 GeneID:8617830 KEGG:ddi:DDB_G0271336
InParanoid:Q55BH4 OMA:YSGFRET Uniprot:Q55BH4
Length = 183
Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 40/151 (26%), Positives = 79/151 (52%)
Query: 10 ALLVIDMQNDFILDDGLMRVDG-GKAIVPNVIKAVEIARQHGI--LVVWVVREHDPLGRD 66
AL++IDM ND + G++ + I+P++ + +E AR++ L+V+ H R+
Sbjct: 3 ALIIIDMVNDLV--SGVLANEKYANEIIPSIQRLIENARKNPTEWLIVYSNDAHKEDDRE 60
Query: 67 VELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVV--KMRFSAFFATHLNS-FLR 123
++++ +H +G+ GA+++D L+ + D +++ K + AF T L F +
Sbjct: 61 MKVWGKH---------AMEGTEGAQVIDSLKPMDTDNEIISPKRFYGAFDLTGLGEIFEK 111
Query: 124 TAGIDSLVIVGVQTPNCIRQTVFDAVELDYK 154
G+ +V+VG T C+R T + A Y+
Sbjct: 112 RGGVTEVVLVGQHTHCCVRHTAYGAFMRGYE 142
>UNIPROTKB|Q88FY5 [details] [associations]
symbol:nicF "Maleamate amidohydrolase" species:160488
"Pseudomonas putida KT2440" [GO:0008152 "metabolic process"
evidence=IDA] [GO:0016811 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in linear amides"
evidence=IDA] [GO:0019439 "aromatic compound catabolic process"
evidence=IDA] InterPro:IPR000868 Pfam:PF00857 GO:GO:0019439
EMBL:AE015451 GenomeReviews:AE015451_GR UniPathway:UPA01010
GO:GO:0016811 Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
RefSeq:NP_746071.1 HSSP:P32400 ProteinModelPortal:Q88FY5
STRING:Q88FY5 GeneID:1046624 KEGG:ppu:PP_3941 PATRIC:19946502
HOGENOM:HOG000078668 KO:K13995 OMA:DAVQHGF ProtClustDB:CLSK909492
BioCyc:MetaCyc:MONOMER-15551 BioCyc:PPUT160488:GIXO-3942-MONOMER
Uniprot:Q88FY5
Length = 213
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 40/147 (27%), Positives = 67/147 (45%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWV-VREHDPLGRDVE 68
ALL+ID + + G A V + +AR G LVV +R P D
Sbjct: 26 ALLMIDFMQGYTTPGAPLYAPGVVAAVEQAAGLLALARDCGTLVVHTNIRYQPPHFADGG 85
Query: 69 LFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
++ + + +G+P A + + + G+ + K SAFFAT L L G+D
Sbjct: 86 VW---VRKAPVMKDMVEGNPLAAFCEAVAPQAGEVVLSKQYASAFFATSLAPLLHAQGVD 142
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDYKS 155
++V+ G T CIR + DA++ +++
Sbjct: 143 TVVLAGCSTSGCIRASAVDAMQHGFRT 169
>TIGR_CMR|BA_0016 [details] [associations]
symbol:BA_0016 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078666 KO:K01463
RefSeq:NP_842587.1 RefSeq:YP_016621.1 RefSeq:YP_026307.1
ProteinModelPortal:Q81W21 DNASU:1086797
EnsemblBacteria:EBBACT00000010721 EnsemblBacteria:EBBACT00000017939
EnsemblBacteria:EBBACT00000020588 GeneID:1086797 GeneID:2816400
GeneID:2851656 KEGG:ban:BA_0016 KEGG:bar:GBAA_0016 KEGG:bat:BAS0019
OMA:NDAYMRE ProtClustDB:CLSK886546
BioCyc:BANT260799:GJAJ-22-MONOMER BioCyc:BANT261594:GJ7F-22-MONOMER
Uniprot:Q81W21
Length = 179
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 42/147 (28%), Positives = 70/147 (47%)
Query: 8 NTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGR-D 66
NTALL+IDM NDF G + + I +++ + + G ++++ +H L R D
Sbjct: 3 NTALLIIDMINDFQFSHGPILAKKCEMITNPILQLKKTMKSFGYPIIYI-NDHYQLWRSD 61
Query: 67 VELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAG 126
++ H + + K +P ++ DY +K +SAF+ T LNS L
Sbjct: 62 IDQLITHCTNEYSENIIHKIAPSSD----------DYIFIKPHYSAFYETPLNSLLGYLK 111
Query: 127 IDSLVIVGVQTPNCIRQTVFDAVELDY 153
I++L++ GV CI T DA +Y
Sbjct: 112 IENLILTGVAGNICILFTANDAHMRNY 138
>TIGR_CMR|SPO_1828 [details] [associations]
symbol:SPO_1828 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 RefSeq:YP_167065.1
ProteinModelPortal:Q5LSE0 GeneID:3193702 KEGG:sil:SPO1828
PATRIC:23376987 OMA:TDQCVES ProtClustDB:CLSK869406 Uniprot:Q5LSE0
Length = 213
Score = 126 (49.4 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 43/122 (35%), Positives = 65/122 (53%)
Query: 35 IVPNVIKAVEIA-RQHGILVVWVVREHDPL-GRDVELFRQHLYSTGTVGPTSKGSPGAEL 92
++PN+ +AV+ A R G+ V++ E L GRD L + TG P KGS ++
Sbjct: 56 VIPNM-QAVQAACRAAGVEVMYTTIESLTLDGRDRSLDYK---ITGFNVP--KGSWDGKV 109
Query: 93 VDGLEIKEGDYKVV-KMRFSAFFATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDAVEL 151
+D + EGD V+ K S F +TH++ LR G+ LVI G+ T C+ + DA +L
Sbjct: 110 IDQIA-PEGDEIVLPKGSSSVFVSTHIDYVLRNLGVRQLVISGLITDQCVESAIRDACDL 168
Query: 152 DY 153
Y
Sbjct: 169 GY 170
>UNIPROTKB|Q50575 [details] [associations]
symbol:pncA "Pyrazinamidase/nicotinamidase" species:1773
"Mycobacterium tuberculosis" [GO:0005506 "iron ion binding"
evidence=IDA] [GO:0006769 "nicotinamide metabolic process"
evidence=IDA] [GO:0008936 "nicotinamidase activity" evidence=IDA]
[GO:0016811 "hydrolase activity, acting on carbon-nitrogen (but not
peptide) bonds, in linear amides" evidence=IDA] [GO:0016999
"antibiotic metabolic process" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0034355 "NAD salvage" evidence=IDA]
InterPro:IPR000868 Pfam:PF00857 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0005506
EMBL:BX842578 GO:GO:0030145 GO:GO:0006769 GO:GO:0016999
Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0034355
HOGENOM:HOG000078666 GO:GO:0008936 KO:K08281 OMA:DKEAYSG
EMBL:AL123456 EMBL:U59967 EMBL:AY743292 EMBL:AY743309 EMBL:FJ151184
EMBL:FJ151191 EMBL:JX303203 EMBL:JX303204 EMBL:JX303205
EMBL:JX303206 EMBL:JX303207 EMBL:JX303209 EMBL:JX303210
EMBL:JX303211 EMBL:JX303215 EMBL:JX303218 EMBL:JX303220
EMBL:JX303222 EMBL:JX303224 EMBL:JX303225 EMBL:JX303226
EMBL:JX303227 EMBL:JX303228 PIR:B70944 RefSeq:NP_216559.1
RefSeq:NP_336568.1 RefSeq:YP_006515455.1 PDB:3PL1 PDBsum:3PL1
SMR:Q50575 EnsemblBacteria:EBMYCT00000000137
EnsemblBacteria:EBMYCT00000070085 GeneID:13316846 GeneID:888260
GeneID:926645 KEGG:mtc:MT2103 KEGG:mtu:Rv2043c KEGG:mtv:RVBD_2043c
PATRIC:18126388 TubercuList:Rv2043c ProtClustDB:CLSK791588
ChEMBL:CHEMBL1697663 Uniprot:Q50575
Length = 186
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 45/149 (30%), Positives = 70/149 (46%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVEL 69
AL+++D+QNDF + G + V GG A+ + + A + +V DP G
Sbjct: 3 ALIIVDVQNDFC-EGGSLAVTGGAALARAISDYLAEAADYHHVVATKDFHIDP-GDHFSG 60
Query: 70 FRQHLYSTGTVGPTSKGSPGAELVDGLE---IKEGDYK-VVKMRFSAFFA-----THLNS 120
YS+ G+PGA+ L+ I+ YK +S F T L +
Sbjct: 61 TPD--YSSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKGAYTGAYSGFEGVDENGTPLLN 118
Query: 121 FLRTAGIDSLVIVGVQTPNCIRQTVFDAV 149
+LR G+D + +VG+ T +C+RQT DAV
Sbjct: 119 WLRQRGVDEVDVVGIATDHCVRQTAEDAV 147
>ASPGD|ASPL0000002190 [details] [associations]
symbol:AN6124 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000868 Pfam:PF00857 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0016787 EMBL:BN001301 Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 ProteinModelPortal:C8V2D3
EnsemblFungi:CADANIAT00006888 OMA:PRNGLTE Uniprot:C8V2D3
Length = 389
Score = 126 (49.4 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/156 (30%), Positives = 67/156 (42%)
Query: 9 TALLVIDMQNDFILDDGLMRVDG-----GKAIVPNVIKAVEIARQHGILVVWVVREHDP- 62
TAL++IDMQ DF G M G + ++P + + + R G V H P
Sbjct: 167 TALVIIDMQKDFCAPGGYMEFQGYDISPARELIPKLQQLLNTFRSAGFPVYHTREGHRPD 226
Query: 63 LGR--DVELFRQHLYSTG----TVGPTSK----GSPGAELVDGLEIKEGDYKVVKMRFSA 112
L E +R S+G + GP + G G + VD L G+ + K A
Sbjct: 227 LSTLSSRETYRSQNNSSGLGIGSPGPLGRLLIRGELGHDTVDELYPLPGEPVIDKPGRGA 286
Query: 113 FFATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDA 148
F T LR GI +LV+ GV T C+ T+ +A
Sbjct: 287 FAYTDFELLLRNKGIKNLVLAGVTTDVCVSTTMREA 322
>TIGR_CMR|CPS_0771 [details] [associations]
symbol:CPS_0771 "isochorismatase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 RefSeq:YP_267520.1
ProteinModelPortal:Q488J4 STRING:Q488J4 DNASU:3522468
GeneID:3522468 KEGG:cps:CPS_0771 PATRIC:21464853
HOGENOM:HOG000251367 OMA:ISKELWT ProtClustDB:CLSK715302
BioCyc:CPSY167879:GI48-857-MONOMER Uniprot:Q488J4
Length = 316
Score = 122 (48.0 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 40/146 (27%), Positives = 66/146 (45%)
Query: 9 TALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVE 68
TAL+++D+QND+ GG+ + N A + A Q L+ ++ P+
Sbjct: 136 TALVLVDLQNDYF--------SGGRFELDNTDSAAKQASQ---LLAHFRQKELPV----- 179
Query: 69 LFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
+ QHL+ S + GAE+ ++ + ++K + +F T L L GID
Sbjct: 180 IHMQHLFEETNAAFFSANTVGAEIESSVKPTANEPVIIKHQIDSFIETTLEQTLVELGID 239
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDYK 154
+LVIVG C++ AV YK
Sbjct: 240 NLVIVGAMAQACVQTLCRSAVNKGYK 265
>TIGR_CMR|SPO_3572 [details] [associations]
symbol:SPO_3572 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078670 RefSeq:YP_168767.1
ProteinModelPortal:Q5LMJ1 GeneID:3196149 KEGG:sil:SPO3572
PATRIC:23380619 OMA:FHEESSE Uniprot:Q5LMJ1
Length = 181
Score = 117 (46.2 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 41/145 (28%), Positives = 64/145 (44%)
Query: 9 TALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVE 68
TAL+++D+QND+ G V G +A + AR+ G+LV+ V H+ +
Sbjct: 4 TALILVDIQNDYF-PGGAWEVPGMEAAAGQAAHLLAAARRDGVLVIHV--RHEFASAEAP 60
Query: 69 LFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
FR P GS GAE+ + + + K R +AF T L L+ I
Sbjct: 61 FFR----------P---GSSGAEIHASVAPTATETVLTKARPNAFVGTALLDLLQGGDIQ 107
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDY 153
++ + G T CI T A +L +
Sbjct: 108 AVTLCGAMTQMCIDATARAAADLGF 132
>UNIPROTKB|Q9KLN1 [details] [associations]
symbol:VC_A0712 "Pyrazinamidase/nicotinamidase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006734 "NADH metabolic process" evidence=ISS] [GO:0008936
"nicotinamidase activity" evidence=ISS] [GO:0016811 "hydrolase
activity, acting on carbon-nitrogen (but not peptide) bonds, in
linear amides" evidence=ISS] InterPro:IPR000868 Pfam:PF00857
EMBL:AE003853 GenomeReviews:AE003853_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 GO:GO:0006734 GO:GO:0008936 KO:K08281 OMA:DKEAYSG
HSSP:O58727 PIR:E82427 RefSeq:NP_233099.1 ProteinModelPortal:Q9KLN1
DNASU:2612028 GeneID:2612028 KEGG:vch:VCA0712 PATRIC:20085970
ProtClustDB:CLSK789004 Uniprot:Q9KLN1
Length = 206
Score = 90 (36.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 89 GAELVDGLEIKEGDYKVVKMR------FSAFF------ATHLNSFLRTAGIDSLVIVGVQ 136
GAE + GL+++ + V K +S FF AT L +L GI + I G+
Sbjct: 88 GAEFIAGLDVQRITHIVTKGTHLDVDSYSGFFDNQRFHATGLAEYLSNQGISEVYIAGLA 147
Query: 137 TPNCIRQTVFDAVELDYKS 155
T C++ T DAV L +K+
Sbjct: 148 TDYCVKYTALDAVSLYFKT 166
Score = 66 (28.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVV-WVVREH 60
ALL++D+QNDF G + V G A+VP VI + +H I W +H
Sbjct: 4 ALLLVDVQNDFS-PSGALPVPDGDAVVP-VINQLLPLFEHVIATKDWHPAKH 53
>TIGR_CMR|VC_A0712 [details] [associations]
symbol:VC_A0712 "pyrazinamidase/nicotinamidase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006734 "NADH
metabolic process" evidence=ISS] [GO:0008936 "nicotinamidase
activity" evidence=ISS] [GO:0016811 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in linear amides"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 EMBL:AE003853
GenomeReviews:AE003853_GR Gene3D:3.40.50.850 SUPFAM:SSF52499
GO:GO:0006734 GO:GO:0008936 KO:K08281 OMA:DKEAYSG HSSP:O58727
PIR:E82427 RefSeq:NP_233099.1 ProteinModelPortal:Q9KLN1
DNASU:2612028 GeneID:2612028 KEGG:vch:VCA0712 PATRIC:20085970
ProtClustDB:CLSK789004 Uniprot:Q9KLN1
Length = 206
Score = 90 (36.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 89 GAELVDGLEIKEGDYKVVKMR------FSAFF------ATHLNSFLRTAGIDSLVIVGVQ 136
GAE + GL+++ + V K +S FF AT L +L GI + I G+
Sbjct: 88 GAEFIAGLDVQRITHIVTKGTHLDVDSYSGFFDNQRFHATGLAEYLSNQGISEVYIAGLA 147
Query: 137 TPNCIRQTVFDAVELDYKS 155
T C++ T DAV L +K+
Sbjct: 148 TDYCVKYTALDAVSLYFKT 166
Score = 66 (28.3 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVV-WVVREH 60
ALL++D+QNDF G + V G A+VP VI + +H I W +H
Sbjct: 4 ALLLVDVQNDFS-PSGALPVPDGDAVVP-VINQLLPLFEHVIATKDWHPAKH 53
>UNIPROTKB|P21369 [details] [associations]
symbol:pncA "pyrazinamidase / nicotinamidase" species:83333
"Escherichia coli K-12" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005829
"cytosol" evidence=TAS] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=IEA] [GO:0008936 "nicotinamidase
activity" evidence=IEA] Reactome:REACT_113934 UniPathway:UPA00830
InterPro:IPR000868 Pfam:PF00857 GO:GO:0005829 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:M26934 Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
HOGENOM:HOG000078666 GO:GO:0008936 PIR:H64936 RefSeq:NP_416282.4
RefSeq:YP_490029.1 ProteinModelPortal:P21369 SMR:P21369
DIP:DIP-10520N IntAct:P21369 PRIDE:P21369
EnsemblBacteria:EBESCT00000003619 EnsemblBacteria:EBESCT00000017215
GeneID:12933969 GeneID:946276 KEGG:ecj:Y75_p1743 KEGG:eco:b1768
PATRIC:32118847 EchoBASE:EB1125 EcoGene:EG11135 KO:K08281
OMA:DKEAYSG ProtClustDB:PRK11609 BioCyc:EcoCyc:NICOTINAMID-MONOMER
BioCyc:ECOL316407:JW1757-MONOMER BioCyc:MetaCyc:NICOTINAMID-MONOMER
Genevestigator:P21369 GO:GO:0019363 Uniprot:P21369
Length = 213
Score = 94 (38.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 110 FSAFF------ATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDAVELDYK 154
+SAFF T L+ +LR ID L+++G+ T C++ TV DA++L YK
Sbjct: 120 YSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFTVLDALQLGYK 170
Score = 57 (25.1 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVV 54
ALL++D+QNDF G + V G + V + ++ + G V+
Sbjct: 5 ALLLVDLQNDFCAG-GALAVPEGDSTVDVANRLIDWCQSRGEAVI 48
>TIGR_CMR|BA_2963 [details] [associations]
symbol:BA_2963 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078670
RefSeq:NP_845297.1 RefSeq:YP_019605.1 RefSeq:YP_029010.1
ProteinModelPortal:Q81P55 DNASU:1088097
EnsemblBacteria:EBBACT00000013016 EnsemblBacteria:EBBACT00000017983
EnsemblBacteria:EBBACT00000021000 GeneID:1088097 GeneID:2819948
GeneID:2853180 KEGG:ban:BA_2963 KEGG:bar:GBAA_2963 KEGG:bat:BAS2752
OMA:GPEGSPI ProtClustDB:CLSK916874
BioCyc:BANT260799:GJAJ-2815-MONOMER
BioCyc:BANT261594:GJ7F-2923-MONOMER Uniprot:Q81P55
Length = 176
Score = 96 (38.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 24/73 (32%), Positives = 36/73 (49%)
Query: 82 PTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGIDSLVIVGVQTPNCI 141
P KG+ G ++ + EG+ V K +F T+L L+ GID ++I G+QT C+
Sbjct: 57 PLEKGTDGWKIHAAIAPLEGECVVEKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTQYCV 116
Query: 142 RQTVFDAVELDYK 154
T A YK
Sbjct: 117 DTTTRRACSEGYK 129
Score = 43 (20.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVV----REHDPLGR 65
ALLVID+Q + G M V G+ + + + + R + I V++V ++H PL +
Sbjct: 4 ALLVIDVQAG-MYTAG-MPVHNGEKFLETLQELIGECRSNDIPVIYVQHNGPKDH-PLEK 60
Query: 66 DVELFRQH 73
+ ++ H
Sbjct: 61 GTDGWKIH 68
>SGD|S000003005 [details] [associations]
symbol:PNC1 "Nicotinamidase that converts nicotinamide to
nicotinic acid" species:4932 "Saccharomyces cerevisiae" [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008936 "nicotinamidase activity"
evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005777 "peroxisome" evidence=IEA;IDA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0019363 "pyridine nucleotide
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006348 "chromatin silencing at telomere" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0019358
"nicotinate nucleotide salvage" evidence=ISS] [GO:0001302
"replicative cell aging" evidence=IEP;IMP] UniPathway:UPA00830
InterPro:IPR000868 Pfam:PF00857 SGD:S000003005 GO:GO:0005634
GO:GO:0005777 EMBL:BK006941 GO:GO:0046872 GO:GO:0001302
GO:GO:0000183 GO:GO:0006348 RefSeq:NP_011483.3 GeneID:852851
KEGG:sce:YGL032C Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
GO:GO:0019358 HOGENOM:HOG000078666 OrthoDB:EOG4XSQ09 GO:GO:0008936
EMBL:Z72559 EMBL:AY558481 PIR:S64039 RefSeq:NP_011478.3 PDB:2H0R
PDB:3V8E PDBsum:2H0R PDBsum:3V8E ProteinModelPortal:P53184
SMR:P53184 DIP:DIP-2070N IntAct:P53184 MINT:MINT-522829
STRING:P53184 PaxDb:P53184 PeptideAtlas:P53184 EnsemblFungi:YGL037C
GeneID:852846 KEGG:sce:YGL037C CYGD:YGL037c
GeneTree:ENSGT00530000064935 KO:K01440 OMA:IHCVANT
EvolutionaryTrace:P53184 NextBio:972431 Genevestigator:P53184
GermOnline:YGL037C Uniprot:P53184
Length = 216
Score = 79 (32.9 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 113 FFATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDAVELDYKS 155
F T +N +L D + IVGV C++ T A EL YK+
Sbjct: 140 FHKTDMNKYLEKHHTDEVYIVGVALEYCVKATAISAAELGYKT 182
Score = 71 (30.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 11 LLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVELF 70
L+V+DMQNDFI G + V G+ ++ + ++ A + +V V R+ P R +
Sbjct: 4 LIVVDMQNDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIV-VTRDWHP-SRHISFA 61
Query: 71 RQHL----YSTGT 79
+ H YST T
Sbjct: 62 KNHKDKEPYSTYT 74
>DICTYBASE|DDB_G0295669 [details] [associations]
symbol:DDB_G0295669 "isochorismatase hydrolase"
species:44689 "Dictyostelium discoideum" [GO:0008152 "metabolic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 dictyBase:DDB_G0295669 GO:GO:0016787 EMBL:AAFI02000185
Gene3D:3.40.50.850 SUPFAM:SSF52499 RefSeq:XP_001733055.1
ProteinModelPortal:B0G192 EnsemblProtists:DDB0237829 GeneID:8628341
KEGG:ddi:DDB_G0295669 OMA:VVHVRHE Uniprot:B0G192
Length = 183
Score = 108 (43.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVEL 69
AL+++D QND+ + GK + +A+E + LV+ R L V
Sbjct: 4 ALIIVDEQNDYF------KTKNGKFELVGSEEAMERTK----LVLQDFRNKKQLVCHV-- 51
Query: 70 FRQHLYSTGTVGPTSK-GSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
QH++ G GP + GS G E+ +G++ EG+ VK ++F T L + L+ I
Sbjct: 52 --QHVFPKG--GPFFEDGSVGCEIHEGVKPIEGEEIFVKTAINSFIGTGLEAHLKKHNIT 107
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDY 153
LVI G+ + CI A +L +
Sbjct: 108 ELVITGMMSHMCIDSATRGAKDLGW 132
>TAIR|locus:2166948 [details] [associations]
symbol:NIC3 "nicotinamidase 3" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=IEA;ISS] [GO:0008936
"nicotinamidase activity" evidence=IDA] InterPro:IPR000868
Pfam:PF00857 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB007648
Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0008936
HOGENOM:HOG000078670 eggNOG:COG1535 ProtClustDB:PLN02621
EMBL:BT002920 EMBL:BT004341 IPI:IPI00519900 RefSeq:NP_197713.1
UniGene:At.43885 UniGene:At.67217 ProteinModelPortal:Q9FMX8
SMR:Q9FMX8 IntAct:Q9FMX8 PaxDb:Q9FMX8 PRIDE:Q9FMX8
EnsemblPlants:AT5G23220.1 GeneID:832386 KEGG:ath:AT5G23220
TAIR:At5g23220 InParanoid:Q9FMX8 OMA:MAMASCC PhylomeDB:Q9FMX8
ArrayExpress:Q9FMX8 Genevestigator:Q9FMX8 Uniprot:Q9FMX8
Length = 198
Score = 109 (43.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVEL 69
ALLVIDMQN F M K I+ NV+ ++I R+ + V + H D +
Sbjct: 22 ALLVIDMQNHF----SSM----AKPILNNVLTTIDICRRASVPVFFTRHNHKS-PTDHGM 72
Query: 70 FRQHLYSTGTVGPTSKGSPGAELVDGLE--IKEGDYKVVKMRFSAFFATHLNSFLRTAGI 127
+ + G V G+ +E++ ++ + D V K +SAF T L L G+
Sbjct: 73 LGE--WCNGDV--ILDGTTDSEIIQEIQGQVTGPDEMVEKNTYSAFNKTRLQENLEKIGV 128
Query: 128 DSLVIVGVQTPNCIRQTVFDA 148
++++GV T C T +A
Sbjct: 129 KEVIVIGVMTNLCCETTAREA 149
>TIGR_CMR|GSU_2290 [details] [associations]
symbol:GSU_2290 "pyrazinamidase/nicotinamidase, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006734 "NADH
metabolic process" evidence=ISS] [GO:0008936 "nicotinamidase
activity" evidence=ISS] [GO:0016811 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in linear amides"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078666 KO:K08281 OMA:DKEAYSG
HSSP:O58727 RefSeq:NP_953339.1 ProteinModelPortal:Q74AR2
GeneID:2686918 KEGG:gsu:GSU2290 PATRIC:22027439
ProtClustDB:CLSK828798 BioCyc:GSUL243231:GH27-2273-MONOMER
Uniprot:Q74AR2
Length = 201
Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 7 NNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRD 66
N+ ALL++D+QNDF G + V G +VP + + + R G L ++ R+ P R
Sbjct: 3 NDAALLIVDVQNDFC-PGGSLAVPEGDTVVPVLNGYISVFRTAG-LPIFASRDWHP--RM 58
Query: 67 VELFRQH-----LYST-GTVGPT---SKGSPGAELV--DGLEIKEGDYKVVKMRFSAFFA 115
F++H ++ G+ G PG +V G++ + DY + +A
Sbjct: 59 TSHFKEHGGQWPVHCVQGSHGAQFHPDLALPGNAIVISKGMDPERDDYSA--FQGTAADG 116
Query: 116 THLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDAV 149
T L + L GI L + G+ T C++++ + +
Sbjct: 117 TPLPTLLAARGIRHLYLGGLATDYCVKESALEGI 150
>TIGR_CMR|SPO_3580 [details] [associations]
symbol:SPO_3580 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 RefSeq:YP_168775.1 ProteinModelPortal:Q5LMI3
GeneID:3195932 KEGG:sil:SPO3580 PATRIC:23380637 OMA:RRIMIIN
ProtClustDB:CLSK836461 Uniprot:Q5LMI3
Length = 214
Score = 107 (42.7 bits), Expect = 0.00011, P = 0.00011
Identities = 45/145 (31%), Positives = 66/145 (45%)
Query: 9 TALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVE 68
TAL+VIDMQ+DF A+ N+ AV+ AR+ G+ V+ VR+ G
Sbjct: 42 TALVVIDMQSDFTALPVWEAAQLNTAM-ENIRTAVDAARRTGMPVI-AVRQVYKAG---- 95
Query: 69 LFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
L R L G + GSPG L L + D +V K AF +L I
Sbjct: 96 LARL-LNGWFNQGRGNAGSPGIGLDPRLGLAP-DVEVEKSMGDAFSEPAFVRYLEENRIG 153
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDY 153
+L++ G+ +C++ T F A+ Y
Sbjct: 154 TLILTGLDGCHCVKNTAFGALNRGY 178
>UNIPROTKB|P0ADI4 [details] [associations]
symbol:entB species:83333 "Escherichia coli K-12"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IMP] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0009239 "enterobactin biosynthetic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008908 "isochorismatase activity" evidence=IEA]
InterPro:IPR000868 InterPro:IPR016291 Pfam:PF00857
PIRSF:PIRSF001111 PRINTS:PR01398 UniPathway:UPA00017
InterPro:IPR009081 Pfam:PF00550 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:1.10.1200.10 PROSITE:PS50075 PROSITE:PS00012 EMBL:U82598
EMBL:M24148 GO:GO:0016765 EMBL:M24143 GO:GO:0009239 PIR:C91904
RefSeq:NP_415127.1 RefSeq:YP_488884.1 PDB:2FQ1 PDB:3RG2 PDBsum:2FQ1
PDBsum:3RG2 ProteinModelPortal:P0ADI4 SMR:P0ADI4 IntAct:P0ADI4
MINT:MINT-1241343 SWISS-2DPAGE:P0ADI4 PRIDE:P0ADI4
EnsemblBacteria:EBESCT00000003995 EnsemblBacteria:EBESCT00000018134
GeneID:12931911 GeneID:946178 KEGG:ecj:Y75_p0584 KEGG:eco:b0595
PATRIC:32116366 EchoBASE:EB0256 EcoGene:EG10260 eggNOG:COG3433
HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN ProtClustDB:CLSK879705
BioCyc:EcoCyc:ENTB-MONOMER BioCyc:ECOL316407:JW0587-MONOMER
BioCyc:MetaCyc:ENTB-MONOMER SABIO-RK:P0ADI4
EvolutionaryTrace:P0ADI4 Genevestigator:P0ADI4 GO:GO:0008908
Gene3D:3.40.50.850 SUPFAM:SSF52499 Uniprot:P0ADI4
Length = 285
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 41/146 (28%), Positives = 64/146 (43%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVEL 69
ALL+ DMQ+ F+ G + ++ N+ + +QH I V + + + D L
Sbjct: 32 ALLIHDMQDYFVSFWG-ENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRAL 90
Query: 70 FRQHLYSTGTVGPTSKGSPGAE-LVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGID 128
++ GP SP + +VD L D +VK R+SAF + L L+ +G +
Sbjct: 91 LND-MW-----GPGLTRSPEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRN 144
Query: 129 SLVIVGVQTPNCIRQTVFDAVELDYK 154
L+I GV T DA D K
Sbjct: 145 QLIITGVYAHIGCMTTATDAFMRDIK 170
>UNIPROTKB|G4MQX0 [details] [associations]
symbol:MGG_04726 "Isochorismatase family protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000868
InterPro:IPR005123 Pfam:PF00857 PROSITE:PS51471 GO:GO:0016706
Pfam:PF13532 EMBL:CM001231 Gene3D:3.40.50.850 SUPFAM:SSF52499
RefSeq:XP_003710813.1 ProteinModelPortal:G4MQX0
EnsemblFungi:MGG_04726T0 GeneID:2677810 KEGG:mgr:MGG_04726
Uniprot:G4MQX0
Length = 904
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 26/75 (34%), Positives = 35/75 (46%)
Query: 77 TGTVGP--TSKGSPGAELVDGLEI-KEGDYKVVKMRFSAFFATHLNSFLRTAGIDSLVIV 133
TG+ P G+ GAELV + + D +VK ++SAF + L LRT L +
Sbjct: 117 TGSSKPECVRPGTSGAELVSEAAVDSKRDSNLVKTQYSAFASGQLLPLLRTRLATELYVC 176
Query: 134 GVQTPNCIRQTVFDA 148
G T I T DA
Sbjct: 177 GALTNVSIHATALDA 191
Score = 76 (31.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGIL-VVWVVREHDPLGRDVE 68
ALLVID+QNDF G + V + + ++ R G V+WV E+D R VE
Sbjct: 17 ALLVIDLQNDFASPTGALPVTEPEGYIGRILDVAAAFRASGDGDVIWVRSEYDA-PRPVE 75
>TAIR|locus:2166958 [details] [associations]
symbol:NIC2 "nicotinamidase 2" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008152
"metabolic process" evidence=IEA;ISS] [GO:0008936 "nicotinamidase
activity" evidence=IDA] [GO:0019674 "NAD metabolic process"
evidence=IMP] InterPro:IPR000868 Pfam:PF00857 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB007648 Gene3D:3.40.50.850
SUPFAM:SSF52499 GO:GO:0019674 GO:GO:0008936 HOGENOM:HOG000078670
UniGene:At.73054 EMBL:BT004805 EMBL:AK227782 IPI:IPI00537755
RefSeq:NP_197714.1 UniGene:At.31020 ProteinModelPortal:Q9FMX7
SMR:Q9FMX7 IntAct:Q9FMX7 PRIDE:Q9FMX7 EnsemblPlants:AT5G23230.1
GeneID:832387 KEGG:ath:AT5G23230 TAIR:At5g23230 eggNOG:COG1535
InParanoid:Q9FMX7 OMA:KSTYSAF PhylomeDB:Q9FMX7 ProtClustDB:PLN02621
Genevestigator:Q9FMX7 Uniprot:Q9FMX7
Length = 198
Score = 103 (41.3 bits), Expect = 0.00034, P = 0.00034
Identities = 42/142 (29%), Positives = 62/142 (43%)
Query: 10 ALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREH-DPLGRDV- 67
ALLVIDMQN F + I+ N + ++I R+ I V + H P +
Sbjct: 22 ALLVIDMQNHFY--------SMAEPILQNALTTIDICRRASIPVFFTRHNHKSPTDHGML 73
Query: 68 -ELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAG 126
E + L GT S+ P E+ ++ D V K +SAF THL L G
Sbjct: 74 GEWWNGDLILDGTTD--SEIIP--EI--NRQVTGPDEIVEKSTYSAFNNTHLQEKLDKIG 127
Query: 127 IDSLVIVGVQTPNCIRQTVFDA 148
+ ++++GV T C T +A
Sbjct: 128 VKEVIVIGVMTNLCCETTAREA 149
>TIGR_CMR|GSU_0569 [details] [associations]
symbol:GSU_0569 "isochorismatase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0016787
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078670 RefSeq:NP_951627.1
ProteinModelPortal:Q74FN7 GeneID:2685739 KEGG:gsu:GSU0569
PATRIC:22023887 OMA:TDAWIAG ProtClustDB:CLSK824978
BioCyc:GSUL243231:GH27-594-MONOMER Uniprot:Q74FN7
Length = 182
Score = 100 (40.3 bits), Expect = 0.00067, P = 0.00067
Identities = 41/120 (34%), Positives = 56/120 (46%)
Query: 25 GLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREHDPLGRDVELFRQHLYSTGTVGPTS 84
G + V + PN++ A++ A +GI VV VVR H D FR P
Sbjct: 17 GALPVSYPEGSFPNILAAMDTATANGIPVV-VVR-HASRRPDSATFR----------P-- 62
Query: 85 KGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAGIDSLVIVGVQTPNCIRQT 144
GSPG EL + + D + K +F T+L ++LR GID+LVI G T C T
Sbjct: 63 -GSPGWELHPEVARRPFDLLLEKNLPGSFTDTNLEAWLRERGIDTLVISGYMTQMCCDTT 121
>TIGR_CMR|BA_2371 [details] [associations]
symbol:BA_2371 "isochorismatase" species:198094 "Bacillus
anthracis str. Ames" [GO:0008908 "isochorismatase activity"
evidence=ISS] [GO:0019290 "siderophore biosynthetic process"
evidence=ISS] InterPro:IPR000868 InterPro:IPR016291 Pfam:PF00857
PIRSF:PIRSF001111 PRINTS:PR01398 InterPro:IPR009081 Pfam:PF00550
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.10.1200.10 SUPFAM:SSF47336 PROSITE:PS50075
HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN GO:GO:0008908
Gene3D:3.40.50.850 SUPFAM:SSF52499 RefSeq:NP_844753.1
RefSeq:YP_019015.1 RefSeq:YP_028468.1 HSSP:O33409
ProteinModelPortal:Q81QP8 DNASU:1083815
EnsemblBacteria:EBBACT00000009199 EnsemblBacteria:EBBACT00000016713
EnsemblBacteria:EBBACT00000021823 GeneID:1083815 GeneID:2816570
GeneID:2852177 KEGG:ban:BA_2371 KEGG:bar:GBAA_2371 KEGG:bat:BAS2207
ProtClustDB:CLSK887817 BioCyc:BANT260799:GJAJ-2273-MONOMER
BioCyc:BANT261594:GJ7F-2354-MONOMER Uniprot:Q81QP8
Length = 295
Score = 104 (41.7 bits), Expect = 0.00068, P = 0.00068
Identities = 41/129 (31%), Positives = 61/129 (47%)
Query: 11 LLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAV-EIARQHGILVVWVVREHDPLGRDVEL 69
LL+ DMQ F+ D + K + + IK + E ++ GI VV+ + P G+ +E
Sbjct: 33 LLIHDMQEYFL--DAYSDKESPKVELISNIKVIREKCKELGIPVVYTAQ---PGGQTLEQ 87
Query: 70 --FRQHLYSTGT-VGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFLRTAG 126
Q + G GP K ++VD L E D + K R+SAF T+L L G
Sbjct: 88 RGLLQDFWGDGIPAGPDKK-----KIVDELTPDEDDIFLTKWRYSAFKKTNLLEILNEQG 142
Query: 127 IDSLVIVGV 135
D L+I G+
Sbjct: 143 RDQLIICGI 151
>UNIPROTKB|P0ADI7 [details] [associations]
symbol:yecD "predicted hydrolase" species:83333
"Escherichia coli K-12" [GO:0008152 "metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016787 Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 HOGENOM:HOG000078668 EMBL:X53863
PIR:C64949 RefSeq:NP_416381.2 RefSeq:YP_490129.1 PDB:1J2R
PDBsum:1J2R ProteinModelPortal:P0ADI7 SMR:P0ADI7
EnsemblBacteria:EBESCT00000002425 EnsemblBacteria:EBESCT00000016718
GeneID:12930338 GeneID:946384 KEGG:ecj:Y75_p1843 KEGG:eco:b1867
PATRIC:32119057 EchoBASE:EB2280 EcoGene:EG12378 OMA:WELGFSL
ProtClustDB:PRK11440 BioCyc:EcoCyc:EG12378-MONOMER
BioCyc:ECOL316407:JW5307-MONOMER EvolutionaryTrace:P0ADI7
Genevestigator:P0ADI7 Uniprot:P0ADI7
Length = 188
Score = 100 (40.3 bits), Expect = 0.00076, P = 0.00076
Identities = 42/160 (26%), Positives = 69/160 (43%)
Query: 1 MADTKFNNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEIARQHGILVVWVVREH 60
M + TAL+VID+Q +G++ GG P+ A E+ + G L
Sbjct: 1 MLELNAKTTALVVIDLQ------EGILPFAGG----PHT--ADEVVNRAGKLAAKFRASG 48
Query: 61 DPLGRDVELFRQHLYSTGTVGPTSKGSPGAELVDG-------LEIKEGDYKVVKMRFSAF 113
P+ V + Y+ P SP L + L + D +++K ++ AF
Sbjct: 49 QPVFL-VRVGWSADYAEALKQPVDAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAF 107
Query: 114 FATHLNSFLRTAGIDSLVIVGVQTPNCIRQTVFDAVELDY 153
+ T L LR GID++V+ G+ T + T +A EL +
Sbjct: 108 YGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGF 147
>TIGR_CMR|VC_0771 [details] [associations]
symbol:VC_0771 "vibriobactin-specific isochorismatase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008908
"isochorismatase activity" evidence=ISS] [GO:0019290 "siderophore
biosynthetic process" evidence=ISS] InterPro:IPR000868
InterPro:IPR016291 Pfam:PF00857 PIRSF:PIRSF001111 PRINTS:PR01398
UniPathway:UPA00022 InterPro:IPR009081 Pfam:PF00550 EMBL:CP000627
EMBL:CP001235 GenomeReviews:CP001235_GR Gene3D:1.10.1200.10
SUPFAM:SSF47336 PROSITE:PS50075 GenomeReviews:CP000627_GR
eggNOG:COG3433 HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN
GO:GO:0008908 Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0019537
EMBL:AF287252 RefSeq:YP_001216256.1 RefSeq:YP_002819041.1
ProteinModelPortal:A5F3F4 STRING:A5F3F4 GeneID:5135966
GeneID:7774796 KEGG:vco:VC0395_A0300 KEGG:vcr:VC395_0788
ProtClustDB:CLSK874104 Uniprot:A5F3F4
Length = 293
Score = 103 (41.3 bits), Expect = 0.00091, P = 0.00091
Identities = 45/150 (30%), Positives = 67/150 (44%)
Query: 7 NNTALLVIDMQNDFILDDGLMRVDGGKAIVPNVIKAVEI----ARQHGILVVWVVREHDP 62
+ LL+ DMQ F+ D +P++IK ++ A+Q GI VV+ + P
Sbjct: 27 SRAVLLIHDMQEYFV-----HYFDSQAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQ---P 78
Query: 63 LGRDVELFRQHLYSTGTVGPTSKGSPGAELVDGLEIKEGDYKVVKMRFSAFFATHLNSFL 122
+D + L S GP S ++ L + GD ++ K R+SAF + L +L
Sbjct: 79 ANQDPA--ERALLSDFW-GPGL--SEETAIIAPLAPESGDVQLTKWRYSAFKKSPLLDWL 133
Query: 123 RTAGIDSLVIVGVQTPNCIRQTVFDAVELD 152
R G D L+I GV I T DA D
Sbjct: 134 RETGRDQLIITGVYAHIGILSTALDAFMFD 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.140 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 174 162 0.00079 107 3 11 22 0.49 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 29
No. of states in DFA: 588 (63 KB)
Total size of DFA: 138 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.75u 0.28s 15.03t Elapsed: 00:00:01
Total cpu time: 14.75u 0.28s 15.03t Elapsed: 00:00:01
Start: Sat May 11 07:03:39 2013 End: Sat May 11 07:03:40 2013