Query 030603
Match_columns 174
No_of_seqs 110 out of 1257
Neff 8.2
Searched_HMMs 29240
Date Tue Mar 26 02:35:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030603.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030603hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2igv_A Peptidyl-prolyl CIS-tra 100.0 8.2E-58 2.8E-62 344.8 22.0 172 1-172 1-172 (173)
2 1a58_A Cyclophilin; isomerase, 100.0 1.4E-56 4.8E-61 339.2 22.9 170 3-172 6-177 (177)
3 2he9_A NK-tumor recognition pr 100.0 3E-56 1E-60 340.8 22.5 174 1-174 17-192 (192)
4 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.5E-56 1.2E-60 337.4 22.7 170 2-171 8-179 (179)
5 2z6w_A Peptidyl-prolyl CIS-tra 100.0 4.8E-56 1.6E-60 332.9 22.0 165 1-172 1-165 (165)
6 3pmp_A Cyclophilin A; peptidyl 100.0 9.3E-56 3.2E-60 331.2 21.8 164 2-172 1-164 (164)
7 1qng_A Peptidyl-prolyl CIS-tra 100.0 6.8E-56 2.3E-60 333.5 20.3 169 2-171 2-170 (170)
8 2poy_A Peptidyl-prolyl CIS-tra 100.0 1.3E-55 4.5E-60 335.7 21.3 169 2-170 18-186 (186)
9 2cmt_A Peptidyl-prolyl CIS-tra 100.0 2.1E-55 7.3E-60 331.1 21.9 165 1-172 8-172 (172)
10 2r99_A Peptidyl-prolyl CIS-tra 100.0 3.3E-55 1.1E-59 330.5 22.2 165 1-172 9-173 (173)
11 1mzw_A Cyclophilin H, U-snRNP- 100.0 3.3E-55 1.1E-59 331.6 20.0 168 2-171 9-177 (177)
12 3rdd_A Peptidyl-prolyl CIS-tra 100.0 7.8E-55 2.7E-59 331.3 21.2 165 1-172 20-184 (184)
13 2haq_A Cyclophilin; rotamase, 100.0 7.6E-55 2.6E-59 327.8 20.3 163 1-171 9-172 (172)
14 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.9E-54 6.4E-59 331.3 21.9 166 1-173 25-192 (193)
15 3ich_A Peptidyl-prolyl CIS-tra 100.0 3.2E-53 1.1E-57 323.2 20.3 163 3-172 15-178 (188)
16 4fru_A Cyclophilin B, peptidyl 100.0 4E-53 1.4E-57 322.5 20.3 163 3-172 12-175 (185)
17 1z81_A Cyclophilin; structural 100.0 3E-53 1E-57 331.1 19.8 168 2-171 58-229 (229)
18 2c3b_A Ppiase, cyclophilin; is 100.0 2.6E-52 8.9E-57 314.4 14.3 160 5-171 4-172 (172)
19 2ose_A Probable peptidyl-proly 100.0 6.2E-51 2.1E-55 319.8 18.2 170 2-173 13-208 (234)
20 1ihg_A Cyclophilin 40; ppiase 100.0 5.2E-50 1.8E-54 333.7 21.3 171 3-173 15-186 (370)
21 2x7k_A Peptidyl-prolyl CIS-tra 100.0 6E-49 2E-53 294.5 18.0 154 2-171 10-165 (166)
22 2b71_A Cyclophilin-like protei 100.0 1.4E-48 4.8E-53 298.9 18.3 155 3-173 38-194 (196)
23 2fu0_A Cyclophilin, putative; 100.0 1.9E-48 6.4E-53 290.2 18.2 154 3-172 5-160 (160)
24 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.8E-48 9.4E-53 296.4 19.3 162 1-171 21-191 (191)
25 2poe_A Cyclophilin-like protei 100.0 2.6E-48 8.8E-53 295.5 18.8 148 15-173 23-176 (185)
26 1zkc_A Peptidyl-prolyl CIS-tra 100.0 6.6E-48 2.3E-52 295.2 19.4 148 15-173 26-176 (197)
27 2ok3_A Peptidyl-prolyl CIS-tra 100.0 5.1E-48 1.7E-52 288.4 18.3 148 15-173 7-157 (161)
28 2k7n_A Peptidyl-prolyl CIS-tra 100.0 2.7E-48 9.2E-53 298.4 17.2 156 2-173 10-167 (203)
29 3bo7_A Peptidyl-prolyl CIS-tra 100.0 1.3E-47 4.5E-52 295.3 18.1 148 15-173 13-174 (201)
30 2a2n_A Peptidylprolyl isomeras 100.0 1.1E-47 3.8E-52 289.9 15.7 157 3-170 16-175 (176)
31 1v9t_A Cyclophilin B; beta bar 100.0 7.9E-47 2.7E-51 283.3 16.2 153 2-172 3-166 (166)
32 2hq6_A Serologically defined c 100.0 1.7E-46 5.8E-51 285.3 17.4 154 3-173 24-181 (185)
33 1lop_A Cyclophilin A; rotamase 100.0 3.7E-46 1.3E-50 279.1 14.0 145 15-172 6-164 (164)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 8.6E-46 2.9E-50 278.0 15.5 151 3-171 3-167 (167)
35 3bkp_A Cyclophilin; malaria, i 100.0 3.6E-45 1.2E-49 286.5 16.5 154 3-173 21-194 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 2.2E-37 7.5E-42 255.5 8.8 148 3-167 170-355 (369)
37 3kop_A Uncharacterized protein 95.8 0.088 3E-06 38.9 9.5 32 7-40 23-55 (188)
38 2nnz_A Hypothetical protein; b 94.9 0.066 2.2E-06 38.7 6.3 105 8-150 32-143 (153)
39 1zx8_A Hypothetical protein TM 79.9 8.8 0.0003 26.9 7.3 97 18-151 22-125 (136)
40 1x7f_A Outer surface protein; 46.7 12 0.00042 30.8 2.9 52 98-150 324-376 (385)
41 2p0o_A Hypothetical protein DU 44.2 13 0.00045 30.5 2.6 53 98-151 298-351 (372)
42 2k9u_B Filamin-binding LIM pro 33.3 28 0.00094 16.9 1.8 12 114-125 8-19 (26)
43 3dhx_A Methionine import ATP-b 21.6 1.6E+02 0.0053 19.0 4.6 27 12-40 59-85 (106)
No 1
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=8.2e-58 Score=344.83 Aligned_cols=172 Identities=74% Similarity=1.258 Sum_probs=164.7
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++++.|+|+||||++.||++|+||++||++.++.++.|+..||+|+.||||+|+||||+||+..+++.
T Consensus 1 ~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (173)
T 2igv_A 1 MSRSKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGT 80 (173)
T ss_dssp CCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCC
Confidence 89999999999999999999999999999999999999999877766677888999999999999999999999878888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++.++++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 81 gg~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~ 160 (173)
T 2igv_A 81 GGESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPV 160 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|+
T Consensus 161 ~~v~I~~~g~l~ 172 (173)
T 2igv_A 161 KDCMIADCGQLK 172 (173)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEEEc
Confidence 999999999995
No 2
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.4e-56 Score=339.22 Aligned_cols=170 Identities=59% Similarity=0.988 Sum_probs=160.3
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCC-CccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMS-GKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~-g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
||+||||+.+++++.|+|+||||++.||++|+||++||++.++.+.. |+..||+|+.||||+|+|||||||+..+++.+
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 85 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTG 85 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSC
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCC
Confidence 89999999999999999999999999999999999999987765432 55557999999999999999999998788888
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTS 160 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~ 160 (174)
++++++..+++|+..++|+.+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++|.
T Consensus 86 g~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~ 165 (177)
T 1a58_A 86 GESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPL 165 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988 9999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|.
T Consensus 166 ~~v~I~~~G~l~ 177 (177)
T 1a58_A 166 ADVVILNCGELV 177 (177)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCeEEEEeEEEC
Confidence 999999999984
No 3
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-56 Score=340.78 Aligned_cols=174 Identities=55% Similarity=0.956 Sum_probs=161.1
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCC-CCCccccccCCEEEEeecCceEeeCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-MSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNG 79 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~-~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~ 79 (174)
+.||+||||+.+.+|+.|+|+||||++.||++|+||++||++.++.+ ..|+..||+|+.||||+|+||||+||+..+++
T Consensus 17 ~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 17 RGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp --CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 35999999999999999999999999999999999999999887654 23456679999999999999999999987888
Q ss_pred CCCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CC
Q 030603 80 TGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GR 158 (174)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~ 158 (174)
.+++++++.++++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++
T Consensus 97 ~gg~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~ 176 (192)
T 2he9_A 97 KGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASR 176 (192)
T ss_dssp SCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSC
T ss_pred CCCCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred cccceEEeEeeeeccC
Q 030603 159 TSQTVVIEDCGQLAEK 174 (174)
Q Consensus 159 P~~~i~I~~~g~l~~~ 174 (174)
|.++|+|.+||+|.+|
T Consensus 177 P~~~v~I~~~g~l~~~ 192 (192)
T 2he9_A 177 PYADVRVIDCGVLATK 192 (192)
T ss_dssp BSSCEEEEEEEECC--
T ss_pred CcCCeEEEEeEEEccC
Confidence 9999999999999875
No 4
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.5e-56 Score=337.44 Aligned_cols=170 Identities=57% Similarity=0.995 Sum_probs=160.3
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCC-CCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG-MSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~-~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
.||+||||+.+.+|+.|+|+|+||++.||++|+||++||++.++.+ ..++..||+|+.||||+|+||||+||+..+++.
T Consensus 8 ~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 87 (179)
T 2wfi_A 8 QRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGR 87 (179)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCCCCC
Confidence 3999999999999999999999999999999999999999887654 244566799999999999999999999878888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRT 159 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P 159 (174)
+++++++..+++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++|
T Consensus 88 gg~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P 167 (179)
T 2wfi_A 88 GGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKP 167 (179)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCB
T ss_pred CCCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999987 999
Q ss_pred ccceEEeEeeee
Q 030603 160 SQTVVIEDCGQL 171 (174)
Q Consensus 160 ~~~i~I~~~g~l 171 (174)
.++|+|.+||+|
T Consensus 168 ~~~v~I~~~G~l 179 (179)
T 2wfi_A 168 FAEVRILSCGEL 179 (179)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEeCeeC
Confidence 999999999987
No 5
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=4.8e-56 Score=332.87 Aligned_cols=165 Identities=72% Similarity=1.221 Sum_probs=155.9
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++|+.|+|+||||++.||++|+||++||+|.++.+ |+|+.|||++|+||+|+||+..+++.
T Consensus 1 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g~ 73 (165)
T 2z6w_A 1 MGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGT 73 (165)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCC-------STTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCcc-------CcCCEEEEEECCCEEEeCCccCCCCC
Confidence 78999999999999999999999999999999999999998765432 99999999999999999999877888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++.++++|+..++|.++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+++++.+++|.
T Consensus 74 gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~ 153 (165)
T 2z6w_A 74 GGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTS 153 (165)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCS
T ss_pred CCCcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCC
Confidence 88899999999999899999999999999999999999999999999999999999999999999999999998779999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|+
T Consensus 154 ~~v~I~~~g~l~ 165 (165)
T 2z6w_A 154 KKIVITDCGQLS 165 (165)
T ss_dssp SCEEEEEEEECC
T ss_pred CcEEEEEeEEEC
Confidence 999999999984
No 6
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=9.3e-56 Score=331.21 Aligned_cols=164 Identities=62% Similarity=1.079 Sum_probs=156.2
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
+||+|||||.+++|+.|+|+||||++.||++|+||++||++.++.+ |+|+.|||++|+||+|+||+..+++.+
T Consensus 1 ~~p~vf~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g~g 73 (164)
T 3pmp_A 1 AMANVFFNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFG-------YKDSIFHRVIPQFMLQGGDFTRHNGTG 73 (164)
T ss_dssp CCCCEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCc-------ccCCEEEEEECCCeEEeCCCCCCCCCC
Confidence 5999999999999999999999999999999999999998765533 999999999999999999987788899
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCccc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ 161 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~~ 161 (174)
+.++++.++++|+..++|..+|+||||+.++++++|||||++.+.|+||++|+|||+|++|||||++|++++++.++|.+
T Consensus 74 g~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~ 153 (164)
T 3pmp_A 74 GKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNA 153 (164)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred ceEEeEeeeec
Q 030603 162 TVVIEDCGQLA 172 (174)
Q Consensus 162 ~i~I~~~g~l~ 172 (174)
+|+|.+||+|+
T Consensus 154 ~v~I~~cg~l~ 164 (164)
T 3pmp_A 154 TIKITDCGTVA 164 (164)
T ss_dssp CEEEEEEEEC-
T ss_pred CEEEEeCeEEC
Confidence 99999999984
No 7
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=6.8e-56 Score=333.51 Aligned_cols=169 Identities=67% Similarity=1.187 Sum_probs=159.3
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.||+||||+.+++++.|+|+||||++.||++|+||++||++. +.++.|+..+|+++.||||+|+||||+||+..+++.+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 80 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSG 80 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCC
Confidence 489999999999999999999999999999999999999864 3345667777999999999999999999998788888
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCccc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ 161 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~~ 161 (174)
+.++++.++++|+..++|.++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+++++.+++|.+
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~ 160 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKR 160 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSS
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997799999
Q ss_pred ceEEeEeeee
Q 030603 162 TVVIEDCGQL 171 (174)
Q Consensus 162 ~i~I~~~g~l 171 (174)
+|+|.+||+|
T Consensus 161 ~v~I~~cG~l 170 (170)
T 1qng_A 161 SVVITDCGEL 170 (170)
T ss_dssp CEEEEEEEEC
T ss_pred CeEEEeceeC
Confidence 9999999987
No 8
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=1.3e-55 Score=335.70 Aligned_cols=169 Identities=68% Similarity=1.141 Sum_probs=160.8
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.||+||||+.+++++.|+|+||||++.||++|+||++||++.++.+..|+..+|+|+.||||+|+||||+||+..+++.+
T Consensus 18 ~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~g 97 (186)
T 2poy_A 18 GNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTG 97 (186)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSC
T ss_pred CCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCC
Confidence 58999999999999999999999999999999999999998777767788888999999999999999999998788888
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCccc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ 161 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~~ 161 (174)
+.++++.++++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+++++++++|.+
T Consensus 98 g~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~ 177 (186)
T 2poy_A 98 GESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTK 177 (186)
T ss_dssp CCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSS
T ss_pred CCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998899999
Q ss_pred ceEEeEeee
Q 030603 162 TVVIEDCGQ 170 (174)
Q Consensus 162 ~i~I~~~g~ 170 (174)
+|+|.+||+
T Consensus 178 ~v~I~~cG~ 186 (186)
T 2poy_A 178 SVCITASGV 186 (186)
T ss_dssp CEEEEEEEC
T ss_pred CEEEEeCCC
Confidence 999999995
No 9
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=2.1e-55 Score=331.11 Aligned_cols=165 Identities=67% Similarity=1.219 Sum_probs=155.7
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++|+.|+|+||||++.||++|+||++||++.++.+ |+|+.||||+|+||||+||+..+++.
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~G~ 80 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGT 80 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBEEEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCce-------ECCCEEEEEECCCEEEcCCccCCCCC
Confidence 46999999999999999999999999999999999999998754422 99999999999999999999878888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++.++++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 81 gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~ 160 (172)
T 2cmt_A 81 GGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVK 160 (172)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCS
T ss_pred CCCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|+
T Consensus 161 ~~v~I~~~g~l~ 172 (172)
T 2cmt_A 161 EPVIISRCGELI 172 (172)
T ss_dssp SCEEEEEEEEEC
T ss_pred CCEEEEEeEeEC
Confidence 999999999984
No 10
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=3.3e-55 Score=330.51 Aligned_cols=165 Identities=64% Similarity=1.129 Sum_probs=156.1
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++|+.|+|+||||++.||++|+||++||++.++. +|+|+.|||++|+||||+||+..+++.
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~ 81 (173)
T 2r99_A 9 RSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGF-------GFKGSSFHRIIPQFMCQGGDFTNHNGT 81 (173)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSC-------CSTTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCc-------eecCCEEEEeeCCCEEEeCCcCCCCCC
Confidence 5699999999999999999999999999999999999999876542 299999999999999999999877888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++..+++|+..++|..+|+||||+.++++++|||||++.++|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 82 gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~ 161 (173)
T 2r99_A 82 GGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPK 161 (173)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCS
T ss_pred CCCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCC
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|.
T Consensus 162 ~~v~I~~cG~l~ 173 (173)
T 2r99_A 162 QKVIIADCGEYV 173 (173)
T ss_dssp SCEEEEEEEECC
T ss_pred CCeEEEEeeeEC
Confidence 999999999984
No 11
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=3.3e-55 Score=331.56 Aligned_cols=168 Identities=59% Similarity=1.046 Sum_probs=158.7
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.||+||||+.+++|+.|+|+||||++.||++|+||++||+++.+. .|+..+|+|+.||||+|+|||||||+..+++.+
T Consensus 9 ~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~--~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 9 VNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRK--DGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEE--TTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCC--cCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 489999999999999999999999999999999999999887643 456667999999999999999999998788888
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTS 160 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~ 160 (174)
+.++++.++++|+..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++|.
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~ 166 (177)
T 1mzw_A 87 VASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPK 166 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBS
T ss_pred CCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999976 9999
Q ss_pred cceEEeEeeee
Q 030603 161 QTVVIEDCGQL 171 (174)
Q Consensus 161 ~~i~I~~~g~l 171 (174)
++|+|.+||+|
T Consensus 167 ~~v~I~~cG~l 177 (177)
T 1mzw_A 167 LPVVISQCGEM 177 (177)
T ss_dssp SCEEEEEEEEC
T ss_pred CCEEEEeceeC
Confidence 99999999987
No 12
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=7.8e-55 Score=331.26 Aligned_cols=165 Identities=73% Similarity=1.234 Sum_probs=157.1
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++++.|+|+|+||++.||++|+||++||+++++.+ |+|+.|||++|+|||||||+..+++.
T Consensus 20 ~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~ 92 (184)
T 3rdd_A 20 MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGT 92 (184)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcc-------cCCCEEEEccCCcEEEeCCCCCCCCC
Confidence 57999999999999999999999999999999999999998776543 99999999999999999998878889
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++..+++|+..++|..+|+||||+.++++++|||||++++.|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 93 gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~ 172 (184)
T 3rdd_A 93 GGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTS 172 (184)
T ss_dssp CCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCS
T ss_pred CCcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+||+|+
T Consensus 173 ~~v~I~~cG~l~ 184 (184)
T 3rdd_A 173 KKITIADCGQLE 184 (184)
T ss_dssp SCEEEEEEEECC
T ss_pred CCeEEEeCeEEC
Confidence 999999999985
No 13
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=7.6e-55 Score=327.77 Aligned_cols=163 Identities=59% Similarity=0.991 Sum_probs=154.6
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++|+.|+|+||||++.||++|+||++||+|.++.+ |+|+.|||++|+|||||||+..+++.
T Consensus 9 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~ 81 (172)
T 2haq_A 9 EVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFG-------YKDSIFHRVIQNFMIQGGDFTNFDGT 81 (172)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCC-------STTCBCCEEETTTEEEECCTTTSSSS
T ss_pred CCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcc-------cCCCEEEEEECCCEEecCCccCCCCC
Confidence 46899999999999999999999999999999999999998765432 99999999999999999997778888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRT 159 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P 159 (174)
++.++++.++++|+..++|. +|+||||+.++++++|||||++.++|+||++|+|||+|++||+||++|++++++. ++|
T Consensus 82 gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P 160 (172)
T 2haq_A 82 GGKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRP 160 (172)
T ss_dssp CCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCB
T ss_pred CCccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcC
Confidence 88999999999998899999 9999999999999999999999999999999999999999999999999999988 799
Q ss_pred ccceEEeEeeee
Q 030603 160 SQTVVIEDCGQL 171 (174)
Q Consensus 160 ~~~i~I~~~g~l 171 (174)
.++|+|.+||+|
T Consensus 161 ~~~v~I~~~g~l 172 (172)
T 2haq_A 161 VKPVKIVASGEL 172 (172)
T ss_dssp SSCEEEEEEEEC
T ss_pred CCCeEEEEeEEC
Confidence 999999999987
No 14
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.9e-54 Score=331.26 Aligned_cols=166 Identities=60% Similarity=1.006 Sum_probs=157.0
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGT 80 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~ 80 (174)
|.||+||||+.+++|+.|+|+|+||++.||++|+||++||++.++.+ |+|+.||||+|+|+|||||+..+++.
T Consensus 25 ~~~p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~ 97 (193)
T 3k2c_A 25 EASGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGT 97 (193)
T ss_dssp -CTTCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSS-------STTCBEEEEETTTEEEECCTTTSSSS
T ss_pred cCCCEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCc-------ccCCEEEEEeCCCEEEeCCCCCCCCc
Confidence 56999999999999999999999999999999999999998765432 99999999999999999998878888
Q ss_pred CCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcc
Q 030603 81 GGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTS 160 (174)
Q Consensus 81 ~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~ 160 (174)
++.++++..+++|+..++|..+|+|||++.++++++|||||++++.|+||++|+|||+|++|||||++|+++++++++|.
T Consensus 98 gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~ 177 (193)
T 3k2c_A 98 GGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVK 177 (193)
T ss_dssp CCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCC
T ss_pred CCcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred --cceEEeEeeeecc
Q 030603 161 --QTVVIEDCGQLAE 173 (174)
Q Consensus 161 --~~i~I~~~g~l~~ 173 (174)
++|+|.+||+|..
T Consensus 178 ~~~~v~I~~cG~l~~ 192 (193)
T 3k2c_A 178 KGYRIEIRDCGVLGS 192 (193)
T ss_dssp TTCCEEEEEEEECC-
T ss_pred cCccEEEEEceEeCC
Confidence 9999999999974
No 15
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.2e-53 Score=323.18 Aligned_cols=163 Identities=60% Similarity=1.075 Sum_probs=154.6
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+|+|||||.+++|+.|+|+|+||++.||++|+||++||++.++.+ |+|+.||||+|+|||||||+..+++.++
T Consensus 15 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 87 (188)
T 3ich_A 15 TVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGG 87 (188)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCS-------STTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCcc-------ccCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 689999999999999999999999999999999999998765432 9999999999999999999777888889
Q ss_pred CcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCccc
Q 030603 83 ESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQ 161 (174)
Q Consensus 83 ~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~~ 161 (174)
.++++.++++|+..++|+.+|+||||+.++++++|||||++.++|+||++|+|||+|++||+||++|++++++. ++|.+
T Consensus 88 ~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~ 167 (188)
T 3ich_A 88 KSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLK 167 (188)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSS
T ss_pred ccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECC
Confidence 99999999999889999999999999999999999999999999999999999999999999999999999988 79999
Q ss_pred ceEEeEeeeec
Q 030603 162 TVVIEDCGQLA 172 (174)
Q Consensus 162 ~i~I~~~g~l~ 172 (174)
+|+|.+||+|.
T Consensus 168 ~v~I~~~~~l~ 178 (188)
T 3ich_A 168 DVIIADCGKIE 178 (188)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEeEEEe
Confidence 99999999983
No 16
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=4e-53 Score=322.47 Aligned_cols=163 Identities=59% Similarity=1.049 Sum_probs=155.5
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+|+||||+.+++++.|+|+||||++.||++|+||++||++.+|. +|+|+.|||++|+|||||||+..+++.++
T Consensus 12 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~-------~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 84 (185)
T 4fru_A 12 TVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGF-------GYKDSKFHRVIKDFMIQGGDFTRGDGTGG 84 (185)
T ss_dssp EEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSC-------CSTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCC-------eEcCCEEEEeeCCCeEEECCCCCCCCCCC
Confidence 78999999999999999999999999999999999999875432 49999999999999999999988888999
Q ss_pred CcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCccc
Q 030603 83 ESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQ 161 (174)
Q Consensus 83 ~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~~ 161 (174)
.++++..+++|+..++|..+|+|||++.++++++|||||++.+.|+||++|+|||+|++||+||++|++++++. ++|.+
T Consensus 85 ~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~ 164 (185)
T 4fru_A 85 KSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLK 164 (185)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSS
T ss_pred ccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 99999
Q ss_pred ceEEeEeeeec
Q 030603 162 TVVIEDCGQLA 172 (174)
Q Consensus 162 ~i~I~~~g~l~ 172 (174)
+|+|.+||+|.
T Consensus 165 ~v~I~~~g~l~ 175 (185)
T 4fru_A 165 DVTIADCGKIE 175 (185)
T ss_dssp CEEEEEEEEEE
T ss_pred CEEEEEceEEe
Confidence 99999999985
No 17
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3e-53 Score=331.12 Aligned_cols=168 Identities=51% Similarity=0.931 Sum_probs=159.1
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.||+||||+.+++|+.|+|+||||++.||++|+||++||+++++. .|+..+|+|+.||||+|+|||||||+..+++.+
T Consensus 58 ~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~--~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 58 SNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKV--NNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp TCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBS--SSSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCC--cCCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 489999999999999999999999999999999999999987653 256668999999999999999999998788899
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEE--cChHHHHHHHhCCCCC--C
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVV--DGYSVIKDMEKVGSES--G 157 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~--~G~~vl~~I~~~~~~~--~ 157 (174)
+.++++.++++|+..++|.++|+||||+.+|++++|||||++.++|+||++|+|||+|+ +||+||++|++++++. +
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~ 215 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIY 215 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999999999987 8
Q ss_pred CcccceEEeEeeee
Q 030603 158 RTSQTVVIEDCGQL 171 (174)
Q Consensus 158 ~P~~~i~I~~~g~l 171 (174)
+|.++|+|.+||+|
T Consensus 216 ~P~~~V~I~~cG~l 229 (229)
T 1z81_A 216 KPKIPINVVECGEL 229 (229)
T ss_dssp CBSSCEEEEEEEEC
T ss_pred CCCCCeEEEeCeeC
Confidence 99999999999987
No 18
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-52 Score=314.40 Aligned_cols=160 Identities=66% Similarity=1.094 Sum_probs=122.0
Q ss_pred eEEEEEEEC--C---EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCC
Q 030603 5 RVFFDILIG--K---MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNG 79 (174)
Q Consensus 5 ~v~~di~~~--~---t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~ 79 (174)
+|||||.++ + |++|+|+|+||++.||++|+||++||++.++.+ |+++.|||++|+||||+||+..+++
T Consensus 4 ~vf~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~-------Y~g~~fhRvi~~f~iQgGd~~~~~g 76 (172)
T 2c3b_A 4 QVFFDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEG-------YRESTFHRIIPNFMIQGGDFTRGNG 76 (172)
T ss_dssp CEEEEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTS-------STTCBCCEEETTTEEEECC------
T ss_pred EEEEEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcc-------cCCCEEEEEeCCCEEEeCCcCCCCC
Confidence 899999998 4 667999999999999999999999998765433 9999999999999999999766788
Q ss_pred CCCCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEc--ChHHHHHHHhCCCCCC
Q 030603 80 TGGESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVD--GYSVIKDMEKVGSESG 157 (174)
Q Consensus 80 ~~~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~--G~~vl~~I~~~~~~~~ 157 (174)
.+++++++.++++|+..++|+.+|+||||+.+|++++|||||++.++|+||++|+|||+|++ ||+||++|++++++.+
T Consensus 77 ~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~ 156 (172)
T 2c3b_A 77 TGGRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSG 156 (172)
T ss_dssp ----------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTS
T ss_pred CCCcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCC
Confidence 88899999999999889999999999999999999999999999999999999999999999 9999999999999884
Q ss_pred --CcccceEEeEeeee
Q 030603 158 --RTSQTVVIEDCGQL 171 (174)
Q Consensus 158 --~P~~~i~I~~~g~l 171 (174)
+|.++|+|.+||+|
T Consensus 157 ~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 157 SVRSNTRPKIVNCGEL 172 (172)
T ss_dssp CCCSSSCCEEEEEEEC
T ss_pred CccCCCCeEEEeCeeC
Confidence 99999999999987
No 19
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=6.2e-51 Score=319.80 Aligned_cols=170 Identities=29% Similarity=0.504 Sum_probs=148.2
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCC------CC----CccccccCCEEEEeecCceEee
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIG------MS----GKPLHYKGSTFHRIIPNFMCQG 71 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~------~~----g~~~~y~g~~f~ri~~~~~iq~ 71 (174)
.||+|||||.+++|+.|+|+||||++.||++|+||++||++.+.+. +. |+...|+|+.||||+|+|||||
T Consensus 13 ~~p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQg 92 (234)
T 2ose_A 13 KNPRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVS 92 (234)
T ss_dssp SSCEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEE
T ss_pred CCCEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEc
Confidence 4899999999999999999999999999999999999998762110 11 3222399999999999999999
Q ss_pred CCCCCCCCCCCCcccCCc-----cCCCccCCCCCCCeEEEeee----cCCCCCcceEEEEccC------CCCCCCCceEE
Q 030603 72 GDFTRGNGTGGESIYGMK-----FADENFKMKHTGPGILSMAN----AGPNTNGSQFFICTQK------TPWLDGKHVVF 136 (174)
Q Consensus 72 G~~~~~~~~~~~~~~~~~-----~~~e~~~~~~~~~G~v~~~~----~~~~~~~s~FfItl~~------~~~ld~~~~vf 136 (174)
||+..+++.++.++++.. +. ++.++|..+|+||||+ .++++++|||||++.+ .|+||++|+||
T Consensus 93 Gd~~~g~G~Gg~siyg~~~~p~~f~--~~~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVF 170 (234)
T 2ose_A 93 GDIYNSNGSSAGTVYCDEPIPPVFG--DYFYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVI 170 (234)
T ss_dssp CCCC----CCCCCTTTTCCBCCCCC--SCCCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEE
T ss_pred CCccCCCCCCCccccCCccCccccc--CcCccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEE
Confidence 997778888888888876 44 4578998999999999 8899999999999999 99999999999
Q ss_pred EEEEcChHHHHHHHhCCCCC-CCcccceEEeEeeeecc
Q 030603 137 GKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDCGQLAE 173 (174)
Q Consensus 137 G~V~~G~~vl~~I~~~~~~~-~~P~~~i~I~~~g~l~~ 173 (174)
|+|++|||||++|++++++. ++|.++|+|.+|++|.+
T Consensus 171 G~Vv~GmdVv~~I~~~~t~~~~~P~~~V~I~~~~~l~~ 208 (234)
T 2ose_A 171 GQVYGGLDVLDKINSMIKPYAGRKYPTFSIGKCGAYLD 208 (234)
T ss_dssp EEEEECHHHHHHHHHHTCCCTTCCCCCEEEEEEEECCC
T ss_pred EEEeCCHHHHHHHHhCCcCCCCCccCCEEEEEEEEecC
Confidence 99999999999999999988 99999999999999975
No 20
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=5.2e-50 Score=333.71 Aligned_cols=171 Identities=66% Similarity=1.097 Sum_probs=162.4
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCC-CccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMS-GKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~-g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
||+||||+.+++++.|+|+|+||++.||+||+||++||++.++.+.. |+..||+|+.||||+|+|||||||+..+++.+
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 89999999999999999999999999999999999999998776533 66678999999999999999999998888999
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCccc
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQ 161 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~~ 161 (174)
+.++++.++++|+..++|+.+|+|||++.+|++++||||||+.+.|+||++|+|||+|++||+|+++|+.++++.++|..
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~ 174 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAK 174 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESS
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred ceEEeEeeeecc
Q 030603 162 TVVIEDCGQLAE 173 (174)
Q Consensus 162 ~i~I~~~g~l~~ 173 (174)
+|+|.+|+++.+
T Consensus 175 ~v~I~~~g~l~~ 186 (370)
T 1ihg_A 175 LCVIAECGELKE 186 (370)
T ss_dssp CEEEEEEEEECT
T ss_pred eEEEEEEEEecc
Confidence 999999999864
No 21
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=6e-49 Score=294.52 Aligned_cols=154 Identities=47% Similarity=0.835 Sum_probs=144.2
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.+++|.|+ |+.|+|+||||++.||++|+||++||+ .| ||+|+.|||++|+|+|||||+. +++.+
T Consensus 10 ~~~~v~l~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Y~g~~fhRvi~~f~iQgGd~~-~~g~g 73 (166)
T 2x7k_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR-------RG---YYNGTKFHRIIKDFMIQGGDPT-GTGRG 73 (166)
T ss_dssp CCSEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH-------HT---TTTTEECCEEETTTEEEECCTT-SSSSC
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCCHHHHHHHHHHh-------cC---CCCCCEEEEEECCCEEEcCCCC-CCCCC
Confidence 47888888 899999999999999999999999995 33 4999999999999999999986 67788
Q ss_pred CCcccCCccCCCcc-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCc
Q 030603 82 GESIYGMKFADENF-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRT 159 (174)
Q Consensus 82 ~~~~~~~~~~~e~~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P 159 (174)
+.++++..+++|.. .++|..+|+||||+.+|++++|||||+++++|+||++|+|||+|++|||||++|++++++. ++|
T Consensus 74 g~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P 153 (166)
T 2x7k_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRP 153 (166)
T ss_dssp CCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCB
T ss_pred CCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCc
Confidence 88999999999984 7889889999999999999999999999999999999999999999999999999999988 899
Q ss_pred ccceEEeEeeee
Q 030603 160 SQTVVIEDCGQL 171 (174)
Q Consensus 160 ~~~i~I~~~g~l 171 (174)
.++|+|.+|.++
T Consensus 154 ~~~i~I~~~~i~ 165 (166)
T 2x7k_A 154 VDDVKIIKAYPS 165 (166)
T ss_dssp SSCCEEEEEEEC
T ss_pred CCCeEEEEEEEe
Confidence 999999999986
No 22
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=1.4e-48 Score=298.87 Aligned_cols=155 Identities=43% Similarity=0.715 Sum_probs=142.5
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+++|.|+ |+.|+|+|+||++.||++|+||++||+ .| ||+|+.|||++|+|||||||+. +++.++
T Consensus 38 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~-------~g---~Y~g~~FhRVi~~f~iQgGd~~-~~g~gg 101 (196)
T 2b71_A 38 RGYITIY-----TNLGDFEVELYWYHSPKTCLNFYTLCE-------MG---FYDNTIFHRVIPNFVIQGGDPT-GTGKGG 101 (196)
T ss_dssp SCEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHH-------TT---TTTTEEEEEEETTTEEEEEETT-SSSSCC
T ss_pred CcEEEEE-----eCCCCEEEEEeCCCCcHHHHHHHHHhh-------cC---CcCCCEEEEEeCCcEEEcCCCC-CCCCCC
Confidence 5788887 899999999999999999999999995 33 4999999999999999999986 677888
Q ss_pred CcccCCccCCCc-cCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcc
Q 030603 83 ESIYGMKFADEN-FKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTS 160 (174)
Q Consensus 83 ~~~~~~~~~~e~-~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~ 160 (174)
.++++.++++|. ..++|..+|+||||+.+|++++|||||+++++|+||++|+|||+|++||+||++|++++++. ++|.
T Consensus 102 ~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 181 (196)
T 2b71_A 102 KSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPI 181 (196)
T ss_dssp CBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBS
T ss_pred CccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCC
Confidence 899999999995 57889899999999999999999999999999999999999999999999999999999987 9999
Q ss_pred cceEEeEeeeecc
Q 030603 161 QTVVIEDCGQLAE 173 (174)
Q Consensus 161 ~~i~I~~~g~l~~ 173 (174)
++|+|.+|++++|
T Consensus 182 ~~i~I~~~~i~~d 194 (196)
T 2b71_A 182 FDLKILRTSTAVN 194 (196)
T ss_dssp SCCEEEEEEC---
T ss_pred CCeEEEEEEEecC
Confidence 9999999999875
No 23
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=1.9e-48 Score=290.22 Aligned_cols=154 Identities=43% Similarity=0.717 Sum_probs=141.7
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
.++|-++ |+.|+|+||||++.||++|+||++||+ .| ||+|+.|||++|+|||||||+. +++.++
T Consensus 5 ~~~v~~~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg 68 (160)
T 2fu0_A 5 PKSAIIY-----TTMGDIHISLFYKECKKTVQNFSVHSI-------NG---YYNNCIFHRVIKHFMVQTGDPS-GDGTGG 68 (160)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH-------TT---TTTTCBCCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----ecCccEEEEEeCCCChHHHHHHHHHhc-------cC---ccCCCEEEEEECCCEEEeCCcC-CCCCCC
Confidence 4555555 999999999999999999999999995 33 4999999999999999999985 677888
Q ss_pred CcccCCccCCCcc-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcc
Q 030603 83 ESIYGMKFADENF-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTS 160 (174)
Q Consensus 83 ~~~~~~~~~~e~~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~ 160 (174)
+++++.++++|.. .++|.++|+||||+.+|++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++|.
T Consensus 69 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~ 148 (160)
T 2fu0_A 69 ESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPL 148 (160)
T ss_dssp CCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBS
T ss_pred CcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcC
Confidence 8899999999987 6889999999999999999999999999999999999999999999999999999999986 9999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+|.+++
T Consensus 149 ~~v~I~~~~v~~ 160 (160)
T 2fu0_A 149 EDIKILNIKINN 160 (160)
T ss_dssp SCCBEEEEEEC-
T ss_pred CCeEEEEEEEeC
Confidence 999999999864
No 24
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.8e-48 Score=296.35 Aligned_cols=162 Identities=41% Similarity=0.714 Sum_probs=143.3
Q ss_pred CCCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCC--CC---ccccccCCEEEEeecCceEeeCCCC
Q 030603 1 MTNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGM--SG---KPLHYKGSTFHRIIPNFMCQGGDFT 75 (174)
Q Consensus 1 ~~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~--~g---~~~~y~g~~f~ri~~~~~iq~G~~~ 75 (174)
|.+++|.|+ |+.|+|+|+||++.||++|+||++||+|.++.+. .| ...||+|+.||||+|+|||||||+.
T Consensus 21 ~~~~~v~l~-----t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~ 95 (191)
T 1w74_A 21 LATATATLH-----TNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPT 95 (191)
T ss_dssp CCSEEEEEE-----ETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTT
T ss_pred CCCeEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCC
Confidence 346677776 9999999999999999999999999998876421 11 2346999999999999999999975
Q ss_pred CCCCCCCCcccCCccCCCc-cCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEc--ChHHHHHHHhC
Q 030603 76 RGNGTGGESIYGMKFADEN-FKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVD--GYSVIKDMEKV 152 (174)
Q Consensus 76 ~~~~~~~~~~~~~~~~~e~-~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~--G~~vl~~I~~~ 152 (174)
+++.++ ++.++++|. ..++|..+|+||||+.+|++++|||||++.++|+||++|+|||+|++ ||+||++|+++
T Consensus 96 -g~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~ 171 (191)
T 1w74_A 96 -GTGRGG---PGYKFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKT 171 (191)
T ss_dssp -SSSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTS
T ss_pred -CCCCCC---CCCccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcC
Confidence 555555 477899994 68899999999999999999999999999999999999999999999 99999999999
Q ss_pred CCCC-CCcccceEEeEeeee
Q 030603 153 GSES-GRTSQTVVIEDCGQL 171 (174)
Q Consensus 153 ~~~~-~~P~~~i~I~~~g~l 171 (174)
+++. ++|.++|+|.+|+++
T Consensus 172 ~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 172 ATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp CBCTTSCBSSCCEEEEEEEC
T ss_pred CcCCCCCcCCCeEEEEEEEC
Confidence 9987 999999999999985
No 25
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2.6e-48 Score=295.46 Aligned_cols=148 Identities=45% Similarity=0.748 Sum_probs=139.6
Q ss_pred EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccCCccCCCc
Q 030603 15 MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFADEN 94 (174)
Q Consensus 15 t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (174)
|+.|+|+||||++.||++|+||++||+. | ||+|+.||||+|+||||||++. +++.++.++++.++++|.
T Consensus 23 t~~G~i~ieL~~~~aP~t~~NF~~L~~~-------g---~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 91 (185)
T 2poe_A 23 TNYGDLKFELFCSQCPKACKNFLALSAS-------G---YYKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYFDDEI 91 (185)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT-------T---TTTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCBCCCC
T ss_pred ecCccEEEEEeCCCCcHHHHHHHHHhcc-------C---CCCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 8999999999999999999999999953 3 4999999999999999999987 677888889999999998
Q ss_pred -cCCCCCCCeEEEeeecC----CCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcccceEEeEe
Q 030603 95 -FKMKHTGPGILSMANAG----PNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTSQTVVIEDC 168 (174)
Q Consensus 95 -~~~~~~~~G~v~~~~~~----~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~~~i~I~~~ 168 (174)
..++|..+|+||||+.+ |++++|||||+++++|+||++|+|||+|++||+||++|++++++. ++|.++|+|.+|
T Consensus 92 ~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~ 171 (185)
T 2poe_A 92 YPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDI 171 (185)
T ss_dssp CTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEE
T ss_pred cCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEE
Confidence 68889899999999998 999999999999999999999999999999999999999999987 999999999999
Q ss_pred eeecc
Q 030603 169 GQLAE 173 (174)
Q Consensus 169 g~l~~ 173 (174)
+++.|
T Consensus 172 ~i~~d 176 (185)
T 2poe_A 172 VIHSN 176 (185)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99975
No 26
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.6e-48 Score=295.20 Aligned_cols=148 Identities=50% Similarity=0.842 Sum_probs=139.5
Q ss_pred EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccCCccCCCc
Q 030603 15 MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFADEN 94 (174)
Q Consensus 15 t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (174)
|+.|+|+|+||++.||++|+||++||+ .| ||+|+.||||+|+|||||||+. +++.++.++++.++++|.
T Consensus 26 T~~G~I~ieL~~~~aP~tv~NF~~L~~-------~g---~Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f~dE~ 94 (197)
T 1zkc_A 26 TNKGDLNLELHCDLTPKTCENFIRLCK-------KH---YYDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPFKDEF 94 (197)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH-------TT---TTTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHHh-------cC---CCCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCcccccc
Confidence 899999999999999999999999994 33 4999999999999999999986 677888899999999995
Q ss_pred -cCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC--CCcccceEEeEeeee
Q 030603 95 -FKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES--GRTSQTVVIEDCGQL 171 (174)
Q Consensus 95 -~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~--~~P~~~i~I~~~g~l 171 (174)
..++|..+|+||||+.++++++|||||++.++|+||++|+|||+|++||+||++|++++++. ++|.++|+|.+|+++
T Consensus 95 ~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~ 174 (197)
T 1zkc_A 95 RPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVF 174 (197)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEE
T ss_pred CcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEE
Confidence 68899999999999999999999999999999999999999999999999999999999987 899999999999999
Q ss_pred cc
Q 030603 172 AE 173 (174)
Q Consensus 172 ~~ 173 (174)
.|
T Consensus 175 ~d 176 (197)
T 1zkc_A 175 VD 176 (197)
T ss_dssp EC
T ss_pred cC
Confidence 76
No 27
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=5.1e-48 Score=288.36 Aligned_cols=148 Identities=49% Similarity=0.770 Sum_probs=139.3
Q ss_pred EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccCCccCCCc
Q 030603 15 MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFADEN 94 (174)
Q Consensus 15 t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (174)
|+.|+|+|+||++.||++|+||++||+. | ||+|+.|||++|+|++|||++. +++.++.++++.++++|.
T Consensus 7 T~~G~i~ieL~~~~aP~t~~NF~~L~~~-------g---~Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~~dE~ 75 (161)
T 2ok3_A 7 TDVGDIKIEVFCERTPKTCENFLALCAS-------N---YYNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKFEDEY 75 (161)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHHT-------T---TTTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCBCCCC
T ss_pred eCCccEEEEEcCCCCcHHHHHHHHHhhh-------c---ccCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcccccc
Confidence 8999999999999999999999999953 3 4999999999999999999987 677888899999999997
Q ss_pred c-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC--CCcccceEEeEeeee
Q 030603 95 F-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES--GRTSQTVVIEDCGQL 171 (174)
Q Consensus 95 ~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~--~~P~~~i~I~~~g~l 171 (174)
. .++|+.+|+||||+.++++++|||||+++++|+||++|+|||+|++||+||++|++++++. ++|.++|+|.+|.++
T Consensus 76 ~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~ 155 (161)
T 2ok3_A 76 SEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIH 155 (161)
T ss_dssp CTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEE
T ss_pred CcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEe
Confidence 5 7889899999999999999999999999999999999999999999999999999999887 799999999999999
Q ss_pred cc
Q 030603 172 AE 173 (174)
Q Consensus 172 ~~ 173 (174)
+|
T Consensus 156 ~~ 157 (161)
T 2ok3_A 156 AN 157 (161)
T ss_dssp CC
T ss_pred cC
Confidence 76
No 28
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=2.7e-48 Score=298.41 Aligned_cols=156 Identities=47% Similarity=0.824 Sum_probs=145.6
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.+++|.|+ |++|+|+||||++.||++|+||++||+ .| ||+++.||||+|+||||+||+. +++.+
T Consensus 10 ~~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~-------~g---~Ydg~~FhRVi~~F~iQgGd~~-~~g~g 73 (203)
T 2k7n_A 10 QPPNVYLE-----TSMGIIVLELYWKHAPKTCKNFAELAR-------RG---YYNGTKFHRIIKDFMIQGGDPT-GTGRG 73 (203)
T ss_dssp CCSEEEEE-----ESSCEEEEEECTTTCTTHHHHHHHHHH-------HT---CGGGCEEEEEETTTEEEEECSS-SSSSC
T ss_pred CCCEEEEE-----eCCCcEEEEEccCCCcHHHHHHHHHHh-------cC---ccCCCEEEEEeCCcEEEcCCCC-CCCCC
Confidence 47889988 899999999999999999999999995 33 4999999999999999999986 67778
Q ss_pred CCcccCCccCCCcc-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCc
Q 030603 82 GESIYGMKFADENF-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRT 159 (174)
Q Consensus 82 ~~~~~~~~~~~e~~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P 159 (174)
+.++++..+++|.. .++|..+|+||||+.++++++|||||++.++|+||++|+|||+|++|||||++|++++++. ++|
T Consensus 74 g~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P 153 (203)
T 2k7n_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRP 153 (203)
T ss_dssp CCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEE
T ss_pred CCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCc
Confidence 88899999999984 8889889999999999999999999999999999999999999999999999999999987 899
Q ss_pred ccceEEeEeeeecc
Q 030603 160 SQTVVIEDCGQLAE 173 (174)
Q Consensus 160 ~~~i~I~~~g~l~~ 173 (174)
.++|+|.+|+++++
T Consensus 154 ~~~V~I~~~~v~~~ 167 (203)
T 2k7n_A 154 VDDVKIIKAYPSGG 167 (203)
T ss_dssp CCCCBEEEEEECCC
T ss_pred CCCeEEEEEEEEec
Confidence 99999999999875
No 29
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-47 Score=295.27 Aligned_cols=148 Identities=34% Similarity=0.589 Sum_probs=133.3
Q ss_pred EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeC-----CCCCCCCCCCCccc---
Q 030603 15 MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGG-----DFTRGNGTGGESIY--- 86 (174)
Q Consensus 15 t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G-----~~~~~~~~~~~~~~--- 86 (174)
|+.|+|+|+||++.||++|+||++||+ .| ||+|+.||||+|+|||||| |+. +++.++.+++
T Consensus 13 T~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~ 81 (201)
T 3bo7_A 13 TTQGSLNIELHADMAPRACDSFLRLCA-------VK---YFDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSIS 81 (201)
T ss_dssp ETTEEEEEEECTTTCHHHHHHHHHHHH-------TT---TTTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCC
T ss_pred eCCCCEEEEEcCCCCcHHHHHHHHHHh-------cC---ccCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccc
Confidence 899999999999999999999999995 33 4999999999999999999 876 6677888888
Q ss_pred ----CCccCCCc-cCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCCC-CCcc
Q 030603 87 ----GMKFADEN-FKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSES-GRTS 160 (174)
Q Consensus 87 ----~~~~~~e~-~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~-~~P~ 160 (174)
+.++++|. ..+.|..+|+||||+.++++++|||||++.++|+||++|+|||+|++||+||++|++++++. ++|.
T Consensus 82 ~~~~g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~ 161 (201)
T 3bo7_A 82 GFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPL 161 (201)
T ss_dssp SSTTCCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBS
T ss_pred cccCCCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcC
Confidence 78899995 67889899999999999999999999999999999999999999999999999999999988 9999
Q ss_pred cceEEeEeeeecc
Q 030603 161 QTVVIEDCGQLAE 173 (174)
Q Consensus 161 ~~i~I~~~g~l~~ 173 (174)
++|+|.+|++|.|
T Consensus 162 ~~i~I~~~~v~~d 174 (201)
T 3bo7_A 162 KPPKVEEIIVFKN 174 (201)
T ss_dssp SCCBEEEEEEEEC
T ss_pred CCeEEEEEEEEcC
Confidence 9999999999976
No 30
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.1e-47 Score=289.88 Aligned_cols=157 Identities=46% Similarity=0.723 Sum_probs=141.9
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+|+...+..+.+|+.|+|+|+||++.||++|+||++||+ .| ||+|+.|||++|+|||||||+. +++.++
T Consensus 16 ~~~~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 84 (176)
T 2a2n_A 16 GPKRVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSR-------NG---YYNGHTFHRIIKGFMIQTGDPT-GTGMGG 84 (176)
T ss_dssp SCCCCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHH-------TT---TTTTCBCCEEETTTEEEECCTT-SSSSCC
T ss_pred CCCCCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhh-------cC---ccCCCEEEEEECCcEEEccCCC-CCCCCC
Confidence 344434444555999999999999999999999999995 33 4999999999999999999985 677888
Q ss_pred CcccCCccCCCcc-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHHHHHHhCCCC--CCCc
Q 030603 83 ESIYGMKFADENF-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVIKDMEKVGSE--SGRT 159 (174)
Q Consensus 83 ~~~~~~~~~~e~~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~--~~~P 159 (174)
.++++.++++|.. .++|.++|+||||+.++++++|||||++.++|+||++|+|||+|++|||||++|++++++ .++|
T Consensus 85 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P 164 (176)
T 2a2n_A 85 ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKP 164 (176)
T ss_dssp CCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCB
T ss_pred CcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCcc
Confidence 8999999999987 689999999999999999999999999999999999999999999999999999999998 4999
Q ss_pred ccceEEeEeee
Q 030603 160 SQTVVIEDCGQ 170 (174)
Q Consensus 160 ~~~i~I~~~g~ 170 (174)
.++|+|.+|.+
T Consensus 165 ~~~v~I~~v~v 175 (176)
T 2a2n_A 165 YEDVSIINITV 175 (176)
T ss_dssp SSCCBEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 99999999976
No 31
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=7.9e-47 Score=283.27 Aligned_cols=153 Identities=32% Similarity=0.509 Sum_probs=136.3
Q ss_pred CCCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCC
Q 030603 2 TNPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTG 81 (174)
Q Consensus 2 ~~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~ 81 (174)
.||+|+|+ |+.|+|+|+||++.||++|+||++||+ .| ||+|+.||||+|+|||||||+....+
T Consensus 3 ~~~~v~~~-----t~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Y~g~~FhRvi~~f~iQgGd~~~~~~-- 65 (166)
T 1v9t_A 3 GDPHVLLT-----TSAGNIELELDKQKAPVSVQNFVDYVN-------SG---FYNNTTFHRVIPGFMIQGGGFTEQMQ-- 65 (166)
T ss_dssp CSCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHH-------TT---TTTTCBEEEEETTTEEEESSBCTTCC--
T ss_pred CCeEEEEE-----eCCccEEEEEcCCCCcHHHHHHHHHhc-------cC---CCCCCEEEEEECCcEEEcCCcCcCCC--
Confidence 48999998 999999999999999999999999994 34 49999999999999999999874332
Q ss_pred CCcccCCccCCCccCCCCCCCeEEEeeec-CCCCCcceEEEEccCCCCCCCC-----ceEEEEEEcChHHHHHHHhCCCC
Q 030603 82 GESIYGMKFADENFKMKHTGPGILSMANA-GPNTNGSQFFICTQKTPWLDGK-----HVVFGKVVDGYSVIKDMEKVGSE 155 (174)
Q Consensus 82 ~~~~~~~~~~~e~~~~~~~~~G~v~~~~~-~~~~~~s~FfItl~~~~~ld~~-----~~vfG~V~~G~~vl~~I~~~~~~ 155 (174)
...++.++++|.....++.+|+||||+. +|++++|||||++.+.|+||++ |+|||+|++|||||++|++++++
T Consensus 66 -~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~ 144 (166)
T 1v9t_A 66 -QKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTH 144 (166)
T ss_dssp -BCCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEE
T ss_pred -CCCCCCcccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCC
Confidence 2234667888987767778999999997 5999999999999999999998 99999999999999999999987
Q ss_pred C-----CCcccceEEeEeeeec
Q 030603 156 S-----GRTSQTVVIEDCGQLA 172 (174)
Q Consensus 156 ~-----~~P~~~i~I~~~g~l~ 172 (174)
. ++|.++|+|.+|++++
T Consensus 145 ~~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 145 DVGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp EETTEEEEESSCCBEEEEEECC
T ss_pred CCCccCCCcCCCeEEEEEEEeC
Confidence 5 6899999999999874
No 32
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=1.7e-46 Score=285.32 Aligned_cols=154 Identities=39% Similarity=0.728 Sum_probs=141.8
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+++|+|+ |+.|+|+||||++.||++|+||++||+. | ||+|+.||||+|+|||||||+. +++.++
T Consensus 24 ~~~V~l~-----T~~G~I~ieL~~~~aP~tv~NF~~L~~~-------g---~Y~g~~FhRvi~~f~iQgGd~~-~~g~gg 87 (185)
T 2hq6_A 24 NGKVLLK-----TTAGDIDIELWSKEAPKACRNFIQLCLE-------A---YYDNTIFHRVVPGFIVQGGDPT-GTGSGG 87 (185)
T ss_dssp BCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHT-------T---TTTTEECCEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----eCCccEEEEEeCCCCcHHHHHHHHHhhc-------C---ccCCCEEEEEECCCEEEcCCCC-CCCCCC
Confidence 6788888 8999999999999999999999999953 3 4999999999999999999986 677888
Q ss_pred CcccCCccCCCcc-CCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEEcChHHH--HHHHhCCCCC-CC
Q 030603 83 ESIYGMKFADENF-KMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSVI--KDMEKVGSES-GR 158 (174)
Q Consensus 83 ~~~~~~~~~~e~~-~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~vl--~~I~~~~~~~-~~ 158 (174)
.++++.++++|.. .++|+.+|+||||+.++++++|||||+++++|+||++|+|||+|+ |++++ ++|++++++. ++
T Consensus 88 ~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~ 166 (185)
T 2hq6_A 88 ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDER 166 (185)
T ss_dssp CCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSC
T ss_pred CcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCC
Confidence 8999999999986 688899999999999999999999999999999999999999999 88874 6899999876 99
Q ss_pred cccceEEeEeeeecc
Q 030603 159 TSQTVVIEDCGQLAE 173 (174)
Q Consensus 159 P~~~i~I~~~g~l~~ 173 (174)
|.++|+|.+|++|+|
T Consensus 167 P~~~v~I~~~~v~~~ 181 (185)
T 2hq6_A 167 PHNPHKIKSCEVLFN 181 (185)
T ss_dssp BSSCCEEEEEEEEEC
T ss_pred CCCCeEEEEEEEeCC
Confidence 999999999999976
No 33
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=3.7e-46 Score=279.13 Aligned_cols=145 Identities=30% Similarity=0.529 Sum_probs=130.0
Q ss_pred EeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccCCccCCCc
Q 030603 15 MNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFADEN 94 (174)
Q Consensus 15 t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~~~~~~e~ 94 (174)
|+.|+|+|+||++.||++|+||++||+ .| ||+|+.|||++|+|||||||+..+. +.+.++.++++|.
T Consensus 6 T~~G~i~ieL~~~~aP~t~~NF~~L~~-------~g---~Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~~dE~ 72 (164)
T 1lop_A 6 TNHGDIVIKTFDDKAPETVKNFLDYCR-------EG---FYNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPIKNEA 72 (164)
T ss_dssp ETTEEEEEEECTTTSHHHHHHHHHHHH-------TT---TTTTEECCEEETTTEEEESSEETTT---EECCCCCCBCCCC
T ss_pred eCCCCEEEEEeCCCCcHHHHHHHHHHh-------cC---CCCCCEEEEEeCCceEecCCcccCC---CcCCCCCcccccc
Confidence 899999999999999999999999994 34 4999999999999999999987433 3456678899998
Q ss_pred cCCCCCCCeEEEeeec-CCCCCcceEEEEccCCCCCCCC--------ceEEEEEEcChHHHHHHHhCCCCC-----CCcc
Q 030603 95 FKMKHTGPGILSMANA-GPNTNGSQFFICTQKTPWLDGK--------HVVFGKVVDGYSVIKDMEKVGSES-----GRTS 160 (174)
Q Consensus 95 ~~~~~~~~G~v~~~~~-~~~~~~s~FfItl~~~~~ld~~--------~~vfG~V~~G~~vl~~I~~~~~~~-----~~P~ 160 (174)
....++.+|+||||+. +|++++|||||++.+.|+||++ |+|||+|++|||||++|++++++. ++|.
T Consensus 73 ~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~ 152 (164)
T 1lop_A 73 NNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPK 152 (164)
T ss_dssp CSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEES
T ss_pred ccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcC
Confidence 7544557999999975 7999999999999999999998 999999999999999999999874 8999
Q ss_pred cceEEeEeeeec
Q 030603 161 QTVVIEDCGQLA 172 (174)
Q Consensus 161 ~~i~I~~~g~l~ 172 (174)
++|+|.+|++++
T Consensus 153 ~~v~I~~~~v~~ 164 (164)
T 1lop_A 153 EDVIIESVTVSE 164 (164)
T ss_dssp SCCEEEEEEECC
T ss_pred CCeEEEEEEEeC
Confidence 999999999974
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=8.6e-46 Score=278.02 Aligned_cols=151 Identities=32% Similarity=0.511 Sum_probs=133.5
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+|+|.|+ |+.|+|+|+||++.||++|+||++||+. | ||+++.|||++|+|||||||+....+
T Consensus 3 ~~~v~l~-----T~~G~i~ieL~~~~aP~t~~NF~~L~~~-------g---~Y~g~~FhRvi~~f~iQgGd~~~~~~--- 64 (167)
T 3s6m_A 3 GSMVELH-----TNHGVIKLELDEAKAPKTVENFLNYVKK-------G---HYDGTIFHRVINGFMIQGGGFEPGLK--- 64 (167)
T ss_dssp CCEEEEE-----ETTEEEEEEECTTTCHHHHHHHHHHHHH-------T---TTTTEECCEEETTTEEEESSEETTTE---
T ss_pred CcEEEEE-----eCCceEEEEEeCCCCcHHHHHHHHHhhh-------c---ccCCCEeEEecCCcEEEeccccCCCC---
Confidence 6788887 9999999999999999999999999953 3 49999999999999999999864322
Q ss_pred CcccCCccCCCccCCCCCCCeEEEeee-cCCCCCcceEEEEccCCCCCCCC--------ceEEEEEEcChHHHHHHHhCC
Q 030603 83 ESIYGMKFADENFKMKHTGPGILSMAN-AGPNTNGSQFFICTQKTPWLDGK--------HVVFGKVVDGYSVIKDMEKVG 153 (174)
Q Consensus 83 ~~~~~~~~~~e~~~~~~~~~G~v~~~~-~~~~~~~s~FfItl~~~~~ld~~--------~~vfG~V~~G~~vl~~I~~~~ 153 (174)
....+.++++|.....++.+|+||||+ .+|++++|||||++.+.++||++ |+|||+|++|||||++|++++
T Consensus 65 ~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~ 144 (167)
T 3s6m_A 65 QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVK 144 (167)
T ss_dssp ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSC
T ss_pred CCCCCCccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCC
Confidence 233466788887655566899999999 57999999999999999999998 999999999999999999999
Q ss_pred CCC-----CCcccceEEeEeeee
Q 030603 154 SES-----GRTSQTVVIEDCGQL 171 (174)
Q Consensus 154 ~~~-----~~P~~~i~I~~~g~l 171 (174)
++. ++|.++|+|.+|.+|
T Consensus 145 t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 145 TGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp BBC---CBTCBSSCCEEEEEEEC
T ss_pred cCCCcccCCCcCCCeEEEEEEEC
Confidence 885 799999999999986
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.6e-45 Score=286.55 Aligned_cols=154 Identities=32% Similarity=0.566 Sum_probs=139.5
Q ss_pred CCeEEEEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCC
Q 030603 3 NPRVFFDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGG 82 (174)
Q Consensus 3 ~p~v~~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~ 82 (174)
+++|.|+ |++|+|+|+||++.||++|+||++||+. | ||+|+.||||+|+|||||||+. +++.++
T Consensus 21 ~~~V~l~-----T~~G~I~ieL~~d~aP~tv~NF~~L~~~-------g---~Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg 84 (232)
T 3bkp_A 21 RGKVVLH-----TSLGDLDVELWARECPLACRNFVQLCLE-------G---YYVNTIFHRVVKDFIVQGGDPT-GTGRGG 84 (232)
T ss_dssp BCEEEEE-----ETTEEEEEEEBTTTCHHHHHHHHHHHHH-------T---TTTTCBEEEEETTTEEEECCTT-SSSSCC
T ss_pred CCEEEEE-----ECCCcEEEEEcCCCCcHHHHHHHHHhhc-------C---ccCCCEEEEEeCCCEEEcCCCC-CCCCCC
Confidence 5678887 8999999999999999999999999953 3 4999999999999999999987 678888
Q ss_pred Cccc--CCccCCCcc-CCCCCCCeEEEeeecCC--------------CCCcceEEEEccCCCCCCCCceEEEEEEcChHH
Q 030603 83 ESIY--GMKFADENF-KMKHTGPGILSMANAGP--------------NTNGSQFFICTQKTPWLDGKHVVFGKVVDGYSV 145 (174)
Q Consensus 83 ~~~~--~~~~~~e~~-~~~~~~~G~v~~~~~~~--------------~~~~s~FfItl~~~~~ld~~~~vfG~V~~G~~v 145 (174)
.+++ +..+++|.. .++|+.+|+||||+.++ ++++|||||++.++|+||++|+|||+|+ ||+|
T Consensus 85 ~si~~~g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v 163 (232)
T 3bkp_A 85 ADTTFDGKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTL 163 (232)
T ss_dssp CCCTTTTCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred CccccCCCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCch
Confidence 8888 888999986 68889999999999986 6999999999999999999999999999 7766
Q ss_pred --HHHHHhCCCCC-CCcccceEEeEeeeecc
Q 030603 146 --IKDMEKVGSES-GRTSQTVVIEDCGQLAE 173 (174)
Q Consensus 146 --l~~I~~~~~~~-~~P~~~i~I~~~g~l~~ 173 (174)
|++|++++++. ++|.++|+|.+|++|++
T Consensus 164 ~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~d 194 (232)
T 3bkp_A 164 YNLMKFNDLEVGKEDRPMTPPFIKSVDVLWN 194 (232)
T ss_dssp HHHHHHTTSCBCGGGCBSSCCBEEEEEEEEC
T ss_pred HHHHHHHcCCcCCCCCcCCCeEEEEEEEEcC
Confidence 89999999977 99999999999999975
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=2.2e-37 Score=255.49 Aligned_cols=148 Identities=24% Similarity=0.355 Sum_probs=117.5
Q ss_pred CCeEEEEEEEC---CEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCC
Q 030603 3 NPRVFFDILIG---KMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNG 79 (174)
Q Consensus 3 ~p~v~~di~~~---~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~ 79 (174)
++.|.|++.+. +++.|+|+|+||++.||+||+||++||+ .| ||+|+.|||+ ++|||||||+. +++
T Consensus 170 ra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~-------~G---fYdGt~FHRV-~gFmIQgGDp~-g~G 237 (369)
T 3rfy_A 170 RASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVE-------RH---FYDGMEIQRS-DGFVVQTGDPE-GPA 237 (369)
T ss_dssp EEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHH-------TT---TTTTEECEEE-EEEEECCCCCC-CCC
T ss_pred CeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhh-------cC---CcCCCeeeee-CCeeEecCCCC-CCC
Confidence 34455554432 2468999999999999999999999995 33 4999999999 99999999986 333
Q ss_pred CC---------------------CCcccCCccCCCc-----cCCCCCCCeEEEeeec--CCCCCcceEEEEc-------c
Q 030603 80 TG---------------------GESIYGMKFADEN-----FKMKHTGPGILSMANA--GPNTNGSQFFICT-------Q 124 (174)
Q Consensus 80 ~~---------------------~~~~~~~~~~~e~-----~~~~~~~~G~v~~~~~--~~~~~~s~FfItl-------~ 124 (174)
.+ +.++++..+.+|. ..++|+.+|+|||++. ++++++|||||++ .
T Consensus 238 ~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~ 317 (369)
T 3rfy_A 238 EGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPS 317 (369)
T ss_dssp SCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSC
T ss_pred CCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCC
Confidence 33 2344555555553 3688999999999997 7999999999999 4
Q ss_pred CCCCCCCCceEEEEEEcChHHHHHHHhCCCCCCCcccceEEeE
Q 030603 125 KTPWLDGKHVVFGKVVDGYSVIKDMEKVGSESGRTSQTVVIED 167 (174)
Q Consensus 125 ~~~~ld~~~~vfG~V~~G~~vl~~I~~~~~~~~~P~~~i~I~~ 167 (174)
+.++||++|+|||+|++|||||++|++. .+...|+|.+
T Consensus 318 ~~~~LDgkytVFG~VveGmdVVdkI~~G-----D~I~sv~I~~ 355 (369)
T 3rfy_A 318 NSNILDGRYAVFGYVTDNEDFLADLKVG-----DVIESIQVVS 355 (369)
T ss_dssp CCSSSCSCEEEEEEEEESTTGGGGCCTT-----CEEEEEEEEE
T ss_pred CCcccCCCeeEEEEEecCHHHHHHHhCC-----CceEEEEEec
Confidence 6899999999999999999999999883 3444455543
No 37
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=95.83 E-value=0.088 Score=38.95 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=25.0
Q ss_pred EEEEEECCEece-EEEEEEcCCCChHHHHHHHHHh
Q 030603 7 FFDILIGKMNKG-RVVMELFADVTPKTAENFRALC 40 (174)
Q Consensus 7 ~~di~~~~t~~G-~i~i~L~~~~aP~~~~nF~~l~ 40 (174)
|+.|.+ +..| .++.+|..+.||+||+.|.++.
T Consensus 23 ~i~itl--~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 23 YINITL--EKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp EEEEEE--TTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EEEEEE--ecCCeEEEEEEccccChHHHHHHHHhC
Confidence 555544 3445 4889999999999999999986
No 38
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=94.95 E-value=0.066 Score=38.73 Aligned_cols=105 Identities=18% Similarity=0.220 Sum_probs=59.4
Q ss_pred EEEEECCEeceEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccC
Q 030603 8 FDILIGKMNKGRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYG 87 (174)
Q Consensus 8 ~di~~~~t~~G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~ 87 (174)
+.|.+++ ..++++|+.+.||++++.|+++.- +... +.+. .+..+- +..
T Consensus 32 I~i~~~~---~~~~a~L~D~~aP~Ta~~f~~~LP-------------l~~~-~~~~-g~E~y~--~lp------------ 79 (153)
T 2nnz_A 32 LRIRFES---AECEVELYEEWAPETVRAIADALP-------------IKST-ANRW-GDEIYF--TTQ------------ 79 (153)
T ss_dssp EEEEETT---EEEEECCCTTSCHHHHHHHHHTCS-------------EEEE-EEEE-TTEEEE--CCS------------
T ss_pred EEEEECC---EEEEEEEcCCCCHHHHHHHHHhCC-------------cEEE-HHhh-CCcEEE--ECC------------
Confidence 3344444 569999999999999999999872 1111 2221 111111 110
Q ss_pred CccCC-CccCCCCCCCeEEEeeecCCCCCcceEEEEccCCCCCC------CCceEEEEEEcChHHHHHHH
Q 030603 88 MKFAD-ENFKMKHTGPGILSMANAGPNTNGSQFFICTQKTPWLD------GKHVVFGKVVDGYSVIKDME 150 (174)
Q Consensus 88 ~~~~~-e~~~~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld------~~~~vfG~V~~G~~vl~~I~ 150 (174)
..... |+. .....+|.|+.-..+. .+.|-.++.|... ..-.+||+|.+|++.|.++.
T Consensus 80 ~~l~~~en~-~~~~~~GDI~Yy~pg~-----~LaIFYg~~p~s~~e~~~as~~~~lG~I~~gle~L~~~~ 143 (153)
T 2nnz_A 80 VAVEKEENS-KDVVELGDVAYWIPGK-----AICLFFGKTPISDDKIRPASAVNVIGRIVNSMEGLKGVA 143 (153)
T ss_dssp CCCCCSSCC-BCCCCTTEEEEETTTT-----EEEEESSCCTTCTTSCCCCSSEEEEEECCSCCCCGGGCC
T ss_pred CCCCCCCCC-cccCCCCeEEEeCCCC-----EEEEEECCccccccccccccccEEEEEEccCHHHHhhCC
Confidence 01111 222 2334578888765432 3666666664221 23578999999988776554
No 39
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=79.93 E-value=8.8 Score=26.86 Aligned_cols=97 Identities=19% Similarity=0.219 Sum_probs=55.0
Q ss_pred eEEEEEEcCCCChHHHHHHHHHhcCCCCCCCCCccccccCCEEEEeecCceEeeCCCCCCCCCCCCcccCCccC-CCccC
Q 030603 18 GRVVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSTFHRIIPNFMCQGGDFTRGNGTGGESIYGMKFA-DENFK 96 (174)
Q Consensus 18 G~i~i~L~~~~aP~~~~nF~~l~~~~~~~~~~g~~~~y~g~~f~ri~~~~~iq~G~~~~~~~~~~~~~~~~~~~-~e~~~ 96 (174)
..+..+|+.. |.|++.|.++.- ..+....|. ..+|-..|.. .+ +|+.
T Consensus 22 ~~v~a~L~Dn--p~Ta~~~~~~LP------l~~~~~~~g-~E~y~~~p~~----------------------l~~~e~~- 69 (136)
T 1zx8_A 22 GKCVIDLNEE--YEVVKLLKEKIP------FESVVNTWG-EEIYFSTPVN----------------------VQKMENP- 69 (136)
T ss_dssp CEEEEEEETT--SHHHHHHHHHCS------EEEECEESS-SEEEEECSCC----------------------CCCCSSE-
T ss_pred cEEEEEEcCC--HHHHHHHHHHCC------cEEEHHHhC-CcEEEECCcc----------------------CCCCCCC-
Confidence 5789999754 889999999962 112222242 3333333321 11 1111
Q ss_pred CCCCCCeEEEeeecCCCCCcceEEEEccCCCCCC------CCceEEEEEEcChHHHHHHHh
Q 030603 97 MKHTGPGILSMANAGPNTNGSQFFICTQKTPWLD------GKHVVFGKVVDGYSVIKDMEK 151 (174)
Q Consensus 97 ~~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld------~~~~vfG~V~~G~~vl~~I~~ 151 (174)
......|.|+.-..+. -|.|-.++.|... ....+||+|.+|++.+.++..
T Consensus 70 ~~~~~~GDIaYw~pgg-----~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~~l~~l~~v~~ 125 (136)
T 1zx8_A 70 REVVEIGDVGYWPPGK-----ALCLFFGKTPMSDDKIQPASAVNVIGKIVEGLEDLKKIKD 125 (136)
T ss_dssp ESSBCTTEEEEEGGGT-----EEEEESSCCTTCSSSBCCSSCEEEEEEEEECGGGGGGCCT
T ss_pred CccCCCCcEEEeCCCC-----EEEEEeCCCccccCccccCcCcEEEEEEccCHHHHhhCCC
Confidence 1223477777655432 4666666664322 237899999999887765543
No 40
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=46.71 E-value=12 Score=30.75 Aligned_cols=52 Identities=12% Similarity=0.211 Sum_probs=40.9
Q ss_pred CCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEE-cChHHHHHHH
Q 030603 98 KHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVV-DGYSVIKDME 150 (174)
Q Consensus 98 ~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~-~G~~vl~~I~ 150 (174)
...++|.|.+.+..-..-..|.-|++.+.|. |++.-|+|+|. +-+.+|+-|.
T Consensus 324 ~~r~rGdItIdN~~ygRY~GElQI~l~dlp~-d~r~NVVG~I~~edl~LLd~I~ 376 (385)
T 1x7f_A 324 VLQERGQVVIGNNSFGKYKGELQIILKEMPI-DERKNIVGTIAEEELFLLDYVG 376 (385)
T ss_dssp CCBCTTEEEEECGGGGGGTTCEEEECSCBCC-CTTEEEEEEECGGGGGGGGGCC
T ss_pred CcccCCcEEEeCCCccccccEeeEEcccCCC-CCCeeEEEEECHHHHHHHHhcC
Confidence 3467999999986543445589999999884 78899999999 4677877775
No 41
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=44.16 E-value=13 Score=30.46 Aligned_cols=53 Identities=9% Similarity=0.159 Sum_probs=41.5
Q ss_pred CCCCCeEEEeeecCCCCCcceEEEEccCCCCCCCCceEEEEEE-cChHHHHHHHh
Q 030603 98 KHTGPGILSMANAGPNTNGSQFFICTQKTPWLDGKHVVFGKVV-DGYSVIKDMEK 151 (174)
Q Consensus 98 ~~~~~G~v~~~~~~~~~~~s~FfItl~~~~~ld~~~~vfG~V~-~G~~vl~~I~~ 151 (174)
...++|.|.+.+..-..-..|.-|++.+.| -|++.-|+|+|. +-+.+|+-|..
T Consensus 298 ~~r~rGdItIdN~~ygrY~GElQI~l~dlp-~d~r~NVVG~I~~edl~LLd~I~~ 351 (372)
T 2p0o_A 298 EARPVGTVTIDNEKYGRYMGEIQVTLVDLP-KDEKVNTITRIIDKDQTILPLIKA 351 (372)
T ss_dssp CCBCTTEEEEECGGGGGGTTCEEEESSCBC-CCTTEEEEEEBCGGGGGGGGGCCT
T ss_pred CcccCCeEEEeCCCccccccEeeEEcccCC-CCCCeEEEEEECHHHHHHHHhcCC
Confidence 346789999998654344558999999998 478899999999 46778887753
No 42
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=33.27 E-value=28 Score=16.92 Aligned_cols=12 Identities=25% Similarity=0.252 Sum_probs=8.9
Q ss_pred CCcceEEEEccC
Q 030603 114 TNGSQFFICTQK 125 (174)
Q Consensus 114 ~~~s~FfItl~~ 125 (174)
.--|..||||.+
T Consensus 8 R~aSSvFITLap 19 (26)
T 2k9u_B 8 RVASSVFITLAP 19 (26)
T ss_dssp SCEEEEEEEECC
T ss_pred heeeeEEEEecC
Confidence 345788999975
No 43
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=21.56 E-value=1.6e+02 Score=18.98 Aligned_cols=27 Identities=15% Similarity=0.204 Sum_probs=20.7
Q ss_pred ECCEeceEEEEEEcCCCChHHHHHHHHHh
Q 030603 12 IGKMNKGRVVMELFADVTPKTAENFRALC 40 (174)
Q Consensus 12 ~~~t~~G~i~i~L~~~~aP~~~~nF~~l~ 40 (174)
+.+++.|+++|+|-++ +...++.++..
T Consensus 59 i~~~~~G~L~v~l~G~--~~~~~~ai~~L 85 (106)
T 3dhx_A 59 AGGVKFGIMLTEMHGT--QQDTQAAIAWL 85 (106)
T ss_dssp ETTEEEEEEEEEEESC--HHHHHHHHHHH
T ss_pred ECCeeEEEEEEEEeCC--HHHHHHHHHHH
Confidence 4778999999999986 55566666655
Done!