AmiGO: BLAST Results


BLAST match view associations BLAST with AT1G75560 AT1G75560 AT1G75560	protein from Arabidopsis thaliana	2.6e-57
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Translational activator for mRNAs with internal ribosome entry sites	gene from Saccharomyces cerevisiae	4.4e-25
BLAST match view associations BLAST with CNBP CNBP CNBP cDNA FLJ61146, highly similar to Cellular nucleic acid-binding protein	protein from Homo sapiens	6.0e-22
BLAST match view associations BLAST with cnbpb cnbpb cnbpb CCHC-type zinc finger, nucleic acid binding protein b	gene_product from Danio rerio	1.2e-21
BLAST match view associations BLAST with CNBP CNBP CNBP Uncharacterized protein	protein from Canis lupus familiaris	1.6e-21
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	1.1e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp cellular nucleic acid binding protein	protein from Mus musculus	1.7e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	2.2e-20
BLAST match view associations BLAST with Q4R501 Q4R501 Q4R501 Brain cDNA, clone: QnpA-14556, similar to human zinc finger protein 9 (a cellular retroviral nucleicacid binding protein) (ZNF9),	protein from Macaca fascicularis	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Pongo abelii	2.2e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp CCHC-type zinc finger, nucleic acid binding protein	gene from Rattus norvegicus	2.2e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp Cellular nucleic acid-binding protein	protein from Rattus norvegicus	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Bos taurus	2.2e-20
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Bos taurus	3.6e-20
BLAST match view associations BLAST with cnbpa cnbpa cnbpa CCHC-type zinc finger, nucleic acid binding protein a	gene_product from Danio rerio	3.6e-20
BLAST match view associations BLAST with MGG_05948 MGG_05948 MGG_05948 Zinc knuckle domain-containing protein	protein from Magnaporthe oryzae 70-15	5.8e-20
BLAST match view associations BLAST with GIS2 GIS2 GIS2	gene_product from Candida albicans	5.0e-19
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Putative uncharacterized protein GIS2	protein from Candida albicans SC5314	5.0e-19
BLAST match view associations BLAST with MGG_13778 MGG_13778 MGG_13778 Zinc finger protein GIS2	protein from Magnaporthe oryzae 70-15	2.7e-18
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	3.7e-17
BLAST match view associations BLAST with DDB_G0293328 DDB_G0293328 DDB_G0293328 Cellular nucleic acid-binding protein	gene from Dictyostelium discoideum	6.0e-17
BLAST match view associations BLAST with CG3800 CG3800 CG3800	protein from Drosophila melanogaster	3.2e-16
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Canis lupus familiaris	6.6e-16
BLAST match view associations BLAST with CSDP1 CSDP1 CSDP1 AT4G36020	protein from Arabidopsis thaliana	3.0e-15
BLAST match view associations BLAST with glh-4 glh-4 glh-4	gene from Caenorhabditis elegans	5.3e-15
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Zinc finger CCHC domain-containing protein 13	protein from Homo sapiens	5.7e-15
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	3.4e-14
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	3.4e-14
BLAST match view associations BLAST with CSP3 CSP3 CSP3 AT2G17870	protein from Arabidopsis thaliana	9.6e-13
BLAST match view associations BLAST with AT3G43590 AT3G43590 AT3G43590	protein from Arabidopsis thaliana	9.8e-12
BLAST match view associations BLAST with zcchc7 zcchc7 zcchc7 zinc finger, CCHC domain containing 7	gene_product from Danio rerio	1.6e-11
BLAST match view associations BLAST with K08D12.3 K08D12.3 K08D12.3	gene from Caenorhabditis elegans	1.9e-11
BLAST match view associations BLAST with AIR2 AIR2 AIR2 RNA-binding subunit of the TRAMP nuclear RNA surveillance complex	gene from Saccharomyces cerevisiae	1.4e-10
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	2.4e-10
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	2.4e-10
BLAST match view associations BLAST with AIR1 AIR1 AIR1 Zinc knuckle protein	gene from Saccharomyces cerevisiae	5.1e-10
BLAST match view associations BLAST with orf19.4844 orf19.4844 orf19.4844	gene_product from Candida albicans	8.5e-09
BLAST match view associations BLAST with P0016H04.11 P0016H04.11 P0016H04.11 Putative uncharacterized protein P0016H04.11	protein from Oryza sativa Japonica Group	1.2e-08
BLAST match view associations BLAST with MGG_09256 MGG_09256 MGG_09256 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.3e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Sus scrofa	8.3e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Bos taurus	8.4e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Zinc finger CCHC domain-containing protein 3	protein from Homo sapiens	8.4e-08
BLAST match view associations BLAST with Zcchc3 Zcchc3 Zcchc3 zinc finger, CCHC domain containing 3	gene from Rattus norvegicus	1.1e-07
BLAST match view associations BLAST with AT5G52380 AT5G52380 AT5G52380	protein from Arabidopsis thaliana	1.6e-07
BLAST match view associations BLAST with AT3G42860 AT3G42860 AT3G42860	protein from Arabidopsis thaliana	2.0e-07
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Uncharacterized protein	protein from Sus scrofa	2.2e-07
BLAST match view associations BLAST with F07E5.5 F07E5.5 F07E5.5	gene from Caenorhabditis elegans	7.3e-07
BLAST match view associations BLAST with F40F12.9 F40F12.9 F40F12.9	gene from Caenorhabditis elegans	5.5e-06
BLAST match view associations BLAST with gag gag gag Gag polyprotein	protein from Equine infectious anemia virus (CLONE 1369)	1.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Uncharacterized protein	protein from Canis lupus familiaris	2.2e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Homo sapiens	2.5e-05
BLAST match view associations BLAST with AT5G36240 AT5G36240 AT5G36240	protein from Arabidopsis thaliana	2.8e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 Zinc finger CCHC domain-containing protein 7	protein from Rattus norvegicus	4.0e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	gene from Rattus norvegicus	4.7e-05
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	5.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	protein from Mus musculus	0.00015
BLAST match view associations BLAST with AT2G12880 AT2G12880 AT2G12880	protein from Arabidopsis thaliana	0.00035
BLAST match view associations BLAST with RS2Z32 RS2Z32 RS2Z32 AT3G53500	protein from Arabidopsis thaliana	0.00035
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030604
        (174 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2005719 - symbol:AT1G75560 species:3702 "Arabi...   447  2.6e-57   2
SGD|S000005199 - symbol:GIS2 "Translational activator for...   196  4.4e-25   2
UNIPROTKB|B4DP17 - symbol:CNBP "cDNA FLJ61146, highly sim...   185  6.0e-22   2
ZFIN|ZDB-GENE-030131-7782 - symbol:cnbpb "CCHC-type zinc ...   182  1.2e-21   2
UNIPROTKB|E2RPD7 - symbol:CNBP "Uncharacterized protein" ...   191  1.6e-21   2
UNIPROTKB|F8WFK2 - symbol:Cnbp "Cellular nucleic acid-bin...   191  1.6e-21   2
UNIPROTKB|O42395 - symbol:CNBP "Cellular nucleic acid-bin...   183  1.1e-20   2
MGI|MGI:88431 - symbol:Cnbp "cellular nucleic acid bindin...   181  1.7e-20   2
POMBASE|SPAC13D6.02c - symbol:byr3 "zinc finger protein B...   169  1.7e-20   2
UNIPROTKB|F1N8C2 - symbol:CNBP "Cellular nucleic acid-bin...   185  2.2e-20   2
UNIPROTKB|P62633 - symbol:CNBP "Cellular nucleic acid-bin...   185  2.2e-20   2
UNIPROTKB|Q4R501 - symbol:Q4R501 "Brain cDNA, clone: QnpA...   185  2.2e-20   2
UNIPROTKB|Q5R5R5 - symbol:CNBP "Cellular nucleic acid-bin...   185  2.2e-20   2
RGD|621807 - symbol:Cnbp "CCHC-type zinc finger, nucleic ...   185  2.2e-20   2
UNIPROTKB|P62634 - symbol:Cnbp "Cellular nucleic acid-bin...   185  2.2e-20   2
UNIPROTKB|Q3T0Q6 - symbol:CNBP "Cellular nucleic acid-bin...   185  2.2e-20   2
UNIPROTKB|G3MZ41 - symbol:ZCCHC13 "Uncharacterized protei...   188  3.6e-20   2
ZFIN|ZDB-GENE-030131-5045 - symbol:cnbpa "CCHC-type zinc ...   173  3.6e-20   2
UNIPROTKB|G4N4A8 - symbol:MGG_05948 "Zinc knuckle domain-...   152  5.8e-20   2
CGD|CAL0002417 - symbol:GIS2 species:5476 "Candida albica...   161  5.0e-19   2
UNIPROTKB|Q59YJ9 - symbol:GIS2 "Putative uncharacterized ...   161  5.0e-19   2
UNIPROTKB|G4MRA3 - symbol:MGG_13778 "Zinc finger protein ...   141  2.7e-18   2
UNIPROTKB|F1NI84 - symbol:CNBP "Cellular nucleic acid-bin...   181  3.7e-17   2
DICTYBASE|DDB_G0293328 - symbol:DDB_G0293328 "Cellular nu...   146  6.0e-17   2
FB|FBgn0034802 - symbol:CG3800 species:7227 "Drosophila m...   150  3.2e-16   2
ASPGD|ASPL0000040986 - symbol:AN9093 species:162425 "Emer...   201  3.7e-16   1
UNIPROTKB|J9NRQ2 - symbol:ZCCHC13 "Uncharacterized protei...   181  6.6e-16   2
TAIR|locus:2135139 - symbol:CSDP1 "cold shock domain prot...   168  3.0e-15   2
WB|WBGene00001601 - symbol:glh-4 species:6239 "Caenorhabd...   158  5.3e-15   2
UNIPROTKB|Q8WW36 - symbol:ZCCHC13 "Zinc finger CCHC domai...   173  5.7e-15   2
ASPGD|ASPL0000028407 - symbol:AN5111 species:162425 "Emer...   184  7.2e-15   2
WB|WBGene00001599 - symbol:glh-2 species:6239 "Caenorhabd...    99  3.4e-14   3
UNIPROTKB|Q966L9 - symbol:glh-2 "ATP-dependent RNA helica...    99  3.4e-14   3
TAIR|locus:2827810 - symbol:CSP3 "cold shock domain prote...   125  9.6e-13   2
TAIR|locus:2079859 - symbol:AT3G43590 species:3702 "Arabi...   116  9.8e-12   2
ZFIN|ZDB-GENE-030102-2 - symbol:zcchc7 "zinc finger, CCHC...   136  1.6e-11   2
WB|WBGene00019537 - symbol:K08D12.3 species:6239 "Caenorh...   128  1.9e-11   2
SGD|S000002334 - symbol:AIR2 "RNA-binding subunit of the ...   112  1.4e-10   2
WB|WBGene00001598 - symbol:glh-1 species:6239 "Caenorhabd...   105  2.4e-10   2
UNIPROTKB|P34689 - symbol:glh-1 "ATP-dependent RNA helica...   105  2.4e-10   2
SGD|S000001341 - symbol:AIR1 "Zinc knuckle protein" speci...   116  5.1e-10   2
POMBASE|SPBP35G2.08c - symbol:air1 "zinc knuckle TRAMP co...   132  6.0e-10   2
CGD|CAL0005378 - symbol:orf19.4844 species:5476 "Candida ...   108  8.5e-09   2
UNIPROTKB|Q65XV7 - symbol:P0016H04.11 "Os05g0111000 prote...   143  1.2e-08   1
UNIPROTKB|G4MQ81 - symbol:MGG_09256 "Uncharacterized prot...   111  1.3e-08   3
UNIPROTKB|F1PQG8 - symbol:ZCCHC3 "Uncharacterized protein...   130  3.8e-08   1
UNIPROTKB|J9P281 - symbol:ZCCHC3 "Uncharacterized protein...   130  4.2e-08   1
UNIPROTKB|F1S7I8 - symbol:ZCCHC3 "Uncharacterized protein...   130  8.3e-08   1
UNIPROTKB|A1A4J3 - symbol:ZCCHC3 "Zinc finger, CCHC domai...   130  8.4e-08   1
UNIPROTKB|Q9NUD5 - symbol:ZCCHC3 "Zinc finger CCHC domain...   130  8.4e-08   1
RGD|1585203 - symbol:Zcchc3 "zinc finger, CCHC domain con...   129  1.1e-07   1
TAIR|locus:2156647 - symbol:AT5G52380 species:3702 "Arabi...   124  1.6e-07   1
TAIR|locus:2078526 - symbol:AT3G42860 species:3702 "Arabi...   126  2.0e-07   1
UNIPROTKB|F1ST82 - symbol:ZCCHC7 "Uncharacterized protein...   110  2.2e-07   2
WB|WBGene00017210 - symbol:F07E5.5 species:6239 "Caenorha...   121  7.3e-07   1
WB|WBGene00043995 - symbol:F40F12.9 species:6239 "Caenorh...   105  5.5e-06   1
UNIPROTKB|P69730 - symbol:gag "Gag polyprotein" species:1...   112  1.0e-05   1
UNIPROTKB|E2RIR0 - symbol:ZCCHC7 "Uncharacterized protein...   104  2.2e-05   2
UNIPROTKB|Q8N3Z6 - symbol:ZCCHC7 "Zinc finger CCHC domain...   109  2.5e-05   1
TAIR|locus:2183607 - symbol:AT5G36240 species:3702 "Arabi...    88  2.8e-05   2
UNIPROTKB|F1M989 - symbol:Zcchc7 "Zinc finger CCHC domain...    91  4.0e-05   2
RGD|1310467 - symbol:Zcchc7 "zinc finger, CCHC domain con...    91  4.7e-05   2
UNIPROTKB|D6RAT4 - symbol:CNBP "Cellular nucleic acid-bin...    96  5.0e-05   1
UNIPROTKB|F1MUH8 - symbol:ZCCHC7 "Zinc finger CCHC domain...   107  6.0e-05   2
UNIPROTKB|Q2KIN0 - symbol:ZCCHC7 "Zinc finger CCHC domain...   107  6.0e-05   2
MGI|MGI:2442912 - symbol:Zcchc7 "zinc finger, CCHC domain...    89  0.00015   2
TAIR|locus:2057295 - symbol:AT2G12880 species:3702 "Arabi...    88  0.00035   1
TAIR|locus:2083936 - symbol:RS2Z32 "arginine/serine-rich ...   103  0.00035   1


>TAIR|locus:2005719 [details] [associations]
            symbol:AT1G75560 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006457 "protein folding" evidence=RCA] [GO:0009408 "response
            to heat" evidence=RCA] [GO:0009644 "response to high light
            intensity" evidence=RCA] [GO:0034976 "response to endoplasmic
            reticulum stress" evidence=RCA] [GO:0042542 "response to hydrogen
            peroxide" evidence=RCA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:BT005709
            EMBL:AK118306 EMBL:AK175193 EMBL:AK175269 EMBL:AK175304
            EMBL:AK175841 EMBL:AK176208 EMBL:AK176516 EMBL:AK176616
            EMBL:AK176626 IPI:IPI00543969 RefSeq:NP_001077828.1
            RefSeq:NP_565112.1 UniGene:At.34758 ProteinModelPortal:Q8GXC5
            SMR:Q8GXC5 PaxDb:Q8GXC5 PRIDE:Q8GXC5 EnsemblPlants:AT1G75560.1
            EnsemblPlants:AT1G75560.2 GeneID:843892 KEGG:ath:AT1G75560
            TAIR:At1g75560 InParanoid:Q8GXC5 OMA:NEGICHS PhylomeDB:Q8GXC5
            ProtClustDB:CLSN2689214 ArrayExpress:Q8GXC5 Genevestigator:Q8GXC5
            Uniprot:Q8GXC5
        Length = 257

 Score = 447 (162.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 73/93 (78%), Positives = 83/93 (89%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 60
             +ASNC NEGICHSCGK+GHRARDCS      GDLRLCNNC+K GH+AADCTNDKACKNCR
Sbjct:   104 VASNCSNEGICHSCGKSGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADCTNDKACKNCR 163

Query:    61 KTGHIARDCQNEPVCNLCNIAGHVARQCPKGDS 93
              +GHIARDC+N+PVCN+C+I+GHVAR CPKGDS
Sbjct:   164 TSGHIARDCRNDPVCNICSISGHVARHCPKGDS 196

 Score = 235 (87.8 bits), Expect = 5.0e-35, Sum P(2) = 5.0e-35
 Identities = 40/84 (47%), Positives = 55/84 (65%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC 69
             +C++C + GH ARDCS       ++ +CNNC  PGHIAA+CT +  C NCR+ GH+A +C
Sbjct:    56 LCNNCKRPGHFARDCS-------NVSVCNNCGLPGHIAAECTAESRCWNCREPGHVASNC 108

Query:    70 QNEPVCNLCNIAGHVARQCPKGDS 93
              NE +C+ C  +GH AR C   DS
Sbjct:   109 SNEGICHSCGKSGHRARDCSNSDS 132

 Score = 193 (73.0 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
 Identities = 36/94 (38%), Positives = 53/94 (56%)

Query:     2 ASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRK 61
             A +C N  +C++CG  GH A +C+   +       C NC +PGH+A++C+N+  C +C K
Sbjct:    67 ARDCSNVSVCNNCGLPGHIAAECTAESR-------CWNCREPGHVASNCSNEGICHSCGK 119

Query:    62 TGHIARDCQNEP-------VCNLCNIAGHVARQC 88
             +GH ARDC N         +CN C   GH+A  C
Sbjct:   120 SGHRARDCSNSDSRAGDLRLCNNCFKQGHLAADC 153

 Score = 188 (71.2 bits), Expect = 4.2e-30, Sum P(2) = 4.2e-30
 Identities = 37/95 (38%), Positives = 51/95 (53%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND------- 53
             +A+ C  E  C +C + GH A +CS      G   +C++C K GH A DC+N        
Sbjct:    85 IAAECTAESRCWNCREPGHVASNCSNE----G---ICHSCGKSGHRARDCSNSDSRAGDL 137

Query:    54 KACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQC 88
             + C NC K GH+A DC N+  C  C  +GH+AR C
Sbjct:   138 RLCNNCFKQGHLAADCTNDKACKNCRTSGHIARDC 172

 Score = 160 (61.4 bits), Expect = 2.6e-57, Sum P(2) = 2.6e-57
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query:   134 MGHMSRDCVG--PLIICRNCGGRGHMAYECPSGRIADRGYRRY 174
             +  MSRD  G   +IIC NCGGRGH AYECPS R+ADRG+RRY
Sbjct:   215 LSRMSRDREGVSAMIICHNCGGRGHRAYECPSARVADRGFRRY 257

 Score = 104 (41.7 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 20/51 (39%), Positives = 28/51 (54%)

Query:   124 HDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSG--RIADRGYR 172
             +D  C++C   GH++RDC    + C  C   GH+A  CP G    +DRG R
Sbjct:   155 NDKACKNCRTSGHIARDCRNDPV-CNICSISGHVARHCPKGDSNYSDRGSR 204

 Score = 101 (40.6 bits), Expect = 0.00063, P = 0.00063
 Identities = 16/35 (45%), Positives = 23/35 (65%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             +C +C + GH +RDC   + +C NCG  GH+A EC
Sbjct:    56 LCNNCKRPGHFARDCSN-VSVCNNCGLPGHIAAEC 89

 Score = 101 (40.6 bits), Expect = 0.00063, P = 0.00063
 Identities = 29/104 (27%), Positives = 48/104 (46%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT------NDK 54
             +A++C N+  C +C  +GH ARDC           +CN C   GH+A  C       +D+
Sbjct:   149 LAADCTNDKACKNCRTSGHIARDCRNDP-------VCNICSISGHVARHCPKGDSNYSDR 201

Query:    55 ACK----NCRKTG--HIARDCQNEP---VCNLCNIAGHVARQCP 89
               +      ++ G   ++RD +      +C+ C   GH A +CP
Sbjct:   202 GSRVRDGGMQRGGLSRMSRDREGVSAMIICHNCGGRGHRAYECP 245

 Score = 46 (21.3 bits), Expect = 2.6e-45, Sum P(2) = 2.6e-45
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query:   126 VICRSCNQMGHMSRDC 141
             +IC +C   GH + +C
Sbjct:   229 IICHNCGGRGHRAYEC 244


>SGD|S000005199 [details] [associations]
            symbol:GIS2 "Translational activator for mRNAs with internal
            ribosome entry sites" species:4932 "Saccharomyces cerevisiae"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA;IDA] [GO:0000932 "cytoplasmic mRNA
            processing body" evidence=IDA] [GO:0003729 "mRNA binding"
            evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0042788 "polysomal ribosome" evidence=IPI] [GO:0045182
            "translation regulator activity" evidence=IDA] [GO:0045727
            "positive regulation of translation" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 SGD:S000005199 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003729 EMBL:BK006947 GO:GO:0045182
            GO:GO:0042788 GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0045727 EMBL:X96722 HOGENOM:HOG000186262
            KO:K09250 GeneTree:ENSGT00510000047065 EMBL:Z71531 EMBL:AY558002
            PIR:S63228 RefSeq:NP_014144.1 ProteinModelPortal:P53849 SMR:P53849
            DIP:DIP-2669N IntAct:P53849 MINT:MINT-2732013 STRING:P53849
            PaxDb:P53849 PeptideAtlas:P53849 EnsemblFungi:YNL255C GeneID:855466
            KEGG:sce:YNL255C CYGD:YNL255c OMA:QCYNCGE OrthoDB:EOG4SJ8Q6
            NextBio:979403 Genevestigator:P53849 GermOnline:YNL255C
            Uniprot:P53849
        Length = 153

 Score = 196 (74.1 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
 Identities = 37/85 (43%), Positives = 48/85 (56%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-----KACKNCRKTGHI 65
             C+ CGK GH A DC +        RLC NC KPGH+  DCT       K C NC +TGH+
Sbjct:     6 CYVCGKIGHLAEDCDSE-------RLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHV 58

Query:    66 ARDCQNEPVCNLCNIAGHVARQCPK 90
               +C  +   N CN  GH++R+CP+
Sbjct:    59 RSECTVQRCFN-CNQTGHISRECPE 82

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 31/86 (36%), Positives = 49/86 (56%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRL-CNNCYKPGHIAADCTNDKA-----CKNCRKTGH 64
             C +C +TGH +R+C    ++    ++ C  C  P H+A DC  +       C  C + GH
Sbjct:    67 CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGH 126

Query:    65 IARDCQNEPVCNLCNIAGHVARQCPK 90
             ++RDCQN+ +C  CN  GH+++ CPK
Sbjct:   127 MSRDCQNDRLCYNCNETGHISKDCPK 152

 Score = 177 (67.4 bits), Expect = 4.3e-23, Sum P(2) = 4.3e-23
 Identities = 35/103 (33%), Positives = 56/103 (54%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR 60
             +A +C +E +C++C K GH   DC+  +    + + C NC + GH+ ++CT  + C NC 
Sbjct:    15 LAEDCDSERLCYNCNKPGHVQTDCT--MPRTVEFKQCYNCGETGHVRSECTVQR-CFNCN 71

Query:    61 KTGHIARDCQNEPV---------CNLCNIAGHVARQCPKGDSL 94
             +TGHI+R+C  EP          C  C    H+A+ C K D +
Sbjct:    72 QTGHISRECP-EPKKTSRFSKVSCYKCGGPNHMAKDCMKEDGI 113

 Score = 120 (47.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 22/59 (37%), Positives = 29/59 (49%)

Query:    35 RLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPV-----CNLCNIAGHVARQC 88
             + C  C K GH+A DC +++ C NC K GH+  DC          C  C   GHV  +C
Sbjct:     4 KACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSEC 62

 Score = 105 (42.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query:    52 NDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQC 88
             + KAC  C K GH+A DC +E +C  CN  GHV   C
Sbjct:     2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDC 38

 Score = 104 (41.7 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query:   122 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 162
             G   + C +C Q GHMSRDC    + C NC   GH++ +CP
Sbjct:   112 GISGLKCYTCGQAGHMSRDCQNDRL-CYNCNETGHISKDCP 151

 Score = 94 (38.1 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
 Identities = 18/41 (43%), Positives = 23/41 (56%)

Query:   128 CRSCNQMGHMSRDCVGPL-------IICRNCGGRGHMAYEC 161
             C +CNQ GH+SR+C  P        + C  CGG  HMA +C
Sbjct:    67 CFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDC 107

 Score = 81 (33.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSGRIADR 169
             C +C + GH+  +C   +  C NC   GH++ ECP  +   R
Sbjct:    49 CYNCGETGHVRSECT--VQRCFNCNQTGHISRECPEPKKTSR 88

 Score = 79 (32.9 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query:   123 YHDVICRSCNQMGHMSRDCVGPLII----CRNCGGRGHMAYECPSGRI 166
             +  V C  C    HM++DC+    I    C  CG  GHM+ +C + R+
Sbjct:    89 FSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQNDRL 136


>UNIPROTKB|B4DP17 [details] [associations]
            symbol:CNBP "cDNA FLJ61146, highly similar to Cellular
            nucleic acid-binding protein" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 HOVERGEN:HBG000397 EMBL:AC108673 EMBL:AC135587
            UniGene:Hs.518249 HGNC:HGNC:13164 ChiTaRS:CNBP EMBL:AK298154
            IPI:IPI00977873 SMR:B4DP17 STRING:B4DP17 Ensembl:ENST00000500450
            UCSC:uc011bku.2 Uniprot:B4DP17
        Length = 160

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    46 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 103

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   104 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 135

 Score = 183 (69.5 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
 Identities = 37/93 (39%), Positives = 49/93 (52%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR-----LCNNCYKPGHIAADCT-NDKACKNCRKTGH 64
             C  CG++GH AR+C T    G  +R     +C  C + GH+A DC   + AC NC + GH
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRDICYRCGESGHLAKDCDLQEDACYNCGRGGH 65

Query:    65 IARDC-----QNEPVCNLCNIAGHVARQCPKGD 92
             IA+DC     + E  C  C   GH+AR C   D
Sbjct:    66 IAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 98

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    36 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 89

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:    90 LARDCDHADEQKCYSCGEFGHIQKDCTK 117

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    78 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 131

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   132 NCSKTSEVNCYRCGESGHLAREC 154

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:    90 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 141

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   142 YRCGESGHLARECTIE 157

 Score = 87 (35.7 bits), Expect = 6.0e-22, Sum P(2) = 6.0e-22
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   102 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 133

 Score = 75 (31.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   118 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 154

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   138 EVNCYRCGESGHLAREC 154


>ZFIN|ZDB-GENE-030131-7782 [details] [associations]
            symbol:cnbpb "CCHC-type zinc finger, nucleic acid
            binding protein b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            ZFIN:ZDB-GENE-030131-7782 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
            InterPro:IPR025836 Pfam:PF14392 EMBL:CR855375 IPI:IPI00862287
            Ensembl:ENSDART00000104520 Bgee:E7FCQ0 Uniprot:E7FCQ0
        Length = 243

 Score = 182 (69.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 37/90 (41%), Positives = 48/90 (53%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR------LCNNCYKPGHIAADCTN-DKACKNCRKTG 63
             C  CG+TGH  ++C    +  G  R       C  C +PGH+A DC   + AC NC + G
Sbjct:    88 CFGCGRTGHWIKNCPNAGRGRGKGRGRGKDLFCYRCGEPGHVARDCERTEDACYNCGRGG 147

Query:    64 HIARDC-----QNEPVCNLCNIAGHVARQC 88
             HI+RDC     + E VC  C  AGH+AR C
Sbjct:   148 HISRDCKEPKKEREQVCYNCGKAGHMARDC 177

 Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 36/97 (37%), Positives = 52/97 (53%)

Query:     1 MASNCHN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH +RDC    +     ++C NC K GH+A DC   N++ C 
Sbjct:   129 VARDCERTEDACYNCGRGGHISRDCKEPKKERE--QVCYNCGKAGHMARDCDHANEQKCY 186

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKGDSL 94
             +C   GHI + C+    C  C   GHVA QC K   +
Sbjct:   187 SCGGFGHIQKGCEKVK-CYRCGEIGHVAVQCSKASEV 222

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 33/83 (39%), Positives = 44/83 (53%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E +C++CGK GH ARDC  H       + C +C   GHI   C   K C  C + GH+A 
Sbjct:   161 EQVCYNCGKAGHMARDCD-HANE----QKCYSCGGFGHIQKGCEKVK-CYRCGEIGHVAV 214

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
              C   +E  C  C  +GHVA++C
Sbjct:   215 QCSKASEVNCYNCGKSGHVAKEC 237

 Score = 97 (39.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+SRDC  P      +C NCG  GHMA +C
Sbjct:   140 CYNCGRGGHISRDCKEPKKEREQVCYNCGKAGHMARDC 177

 Score = 85 (35.0 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query:   122 GYHDVICRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYEC 161
             G   V C  C ++GH++  C     + C NCG  GH+A EC
Sbjct:   197 GCEKVKCYRCGEIGHVAVQCSKASEVNCYNCGKSGHVAKEC 237

 Score = 82 (33.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
 Identities = 15/36 (41%), Positives = 21/36 (58%)

Query:   127 ICRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYEC 161
             +C +C + GHM+RDC       C +CGG GH+   C
Sbjct:   163 VCYNCGKAGHMARDCDHANEQKCYSCGGFGHIQKGC 198

 Score = 66 (28.3 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
 Identities = 21/85 (24%), Positives = 31/85 (36%)

Query:    20 RARDCSTHVQSGGDLRLCNNCYKPG-HIAADCTNDKACKNCRKTGHIARDCQN------- 71
             RA+      Q GG          P   + ++  +   C  C +TGH  ++C N       
Sbjct:    51 RAQTACGAAQRGGTENKQQRVTSPSCRVKSEDMSSNECFGCGRTGHWIKNCPNAGRGRGK 110

Query:    72 ------EPVCNLCNIAGHVARQCPK 90
                   +  C  C   GHVAR C +
Sbjct:   111 GRGRGKDLFCYRCGEPGHVARDCER 135


>UNIPROTKB|E2RPD7 [details] [associations]
            symbol:CNBP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
            GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000047065 OMA:CPNGQGG EMBL:AAEX03012021
            UniGene:Cfa.4499 ProteinModelPortal:E2RPD7 PRIDE:E2RPD7
            Ensembl:ENSCAFT00000006937 NextBio:20852160 Uniprot:E2RPD7
        Length = 179

 Score = 191 (72.3 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 38/88 (43%), Positives = 49/88 (55%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC   +Q   D+  C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCD--LQE--DVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 108

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   109 LARDCDHADEQKCYSCGEFGHIQKDCTK 136

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    97 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 150

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   151 NCSKTSEVNCYRCGESGHLAREC 173

 Score = 178 (67.7 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 36/95 (37%), Positives = 53/95 (55%)

Query:     1 MASNCH-NEGI--CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKA 55
             +A +C   E +  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ 
Sbjct:    63 LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQK 120

Query:    56 CKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 CYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 154

 Score = 132 (51.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 27/65 (41%), Positives = 35/65 (53%)

Query:    36 LCNNCYKPGHIAADCT--ND-KACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQ 87
             +C  C + GH+A DC    D +AC NC + GHIA+DC     + E  C  C   GH+AR 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112

Query:    88 CPKGD 92
             C   D
Sbjct:   113 CDHAD 117

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   109 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 160

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   161 YRCGESGHLARECTIE 176

 Score = 117 (46.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
 Identities = 29/88 (32%), Positives = 40/88 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPV--CNLCNIAGHVARQC--PK 90
             DC   E V  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDVEACYNCGRGGHIAKDCKEPK 93

 Score = 87 (35.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   121 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 152

 Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query:   127 ICRSCNQMGHMSRDC--VGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC     +  C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDC 89

 Score = 83 (34.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    76 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 113

 Score = 75 (31.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   137 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173

 Score = 54 (24.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   157 EVNCYRCGESGHLAREC 173


>UNIPROTKB|F8WFK2 [details] [associations]
            symbol:Cnbp "Cellular nucleic acid-binding protein"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            RGD:621807 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GeneTree:ENSGT00510000047065
            IPI:IPI00201505 ProteinModelPortal:F8WFK2 SMR:F8WFK2
            Ensembl:ENSRNOT00000013884 Uniprot:F8WFK2
        Length = 179

 Score = 191 (72.3 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 38/88 (43%), Positives = 49/88 (55%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC   +Q   D+  C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCD--LQE--DVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 108

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   109 LARDCDHADEQKCYSCGEFGHIQKDCTK 136

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    97 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 150

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   151 NCSKTSEVNCYRCGESGHLAREC 173

 Score = 178 (67.7 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 36/95 (37%), Positives = 53/95 (55%)

Query:     1 MASNCH-NEGI--CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKA 55
             +A +C   E +  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ 
Sbjct:    63 LAKDCDLQEDVEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQK 120

Query:    56 CKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 CYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 154

 Score = 132 (51.5 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 27/65 (41%), Positives = 35/65 (53%)

Query:    36 LCNNCYKPGHIAADCT--ND-KACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQ 87
             +C  C + GH+A DC    D +AC NC + GHIA+DC     + E  C  C   GH+AR 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARD 112

Query:    88 CPKGD 92
             C   D
Sbjct:   113 CDHAD 117

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   109 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 160

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   161 YRCGESGHLARECTIE 176

 Score = 117 (46.2 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
 Identities = 29/88 (32%), Positives = 40/88 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPV--CNLCNIAGHVARQC--PK 90
             DC   E V  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDVEACYNCGRGGHIAKDCKEPK 93

 Score = 87 (35.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   121 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 152

 Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query:   127 ICRSCNQMGHMSRDC--VGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC     +  C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDVEACYNCGRGGHIAKDC 89

 Score = 83 (34.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    76 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 113

 Score = 75 (31.5 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   137 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 173

 Score = 54 (24.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   157 EVNCYRCGESGHLAREC 173


>UNIPROTKB|O42395 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
            GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0006351
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
            OrthoDB:EOG45HRZN EMBL:AF004942 IPI:IPI00582111 RefSeq:NP_990238.1
            UniGene:Gga.3333 ProteinModelPortal:O42395 STRING:O42395
            GeneID:395731 KEGG:gga:395731 InParanoid:O42395 NextBio:20815799
            ArrayExpress:O42395 Uniprot:O42395
        Length = 172

 Score = 183 (69.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 37/88 (42%), Positives = 48/88 (54%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC   +Q     + C NC + GHIA DC   K      C NC K GH
Sbjct:    47 ICYRCGESGHLAKDCD--LQED---KACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 101

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   102 LARDCDHADEQKCYSCGEFGHIQKDCTK 129

 Score = 180 (68.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query:     1 MASNC--HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C    +  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C
Sbjct:    57 LAKDCDLQEDKACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKC 114

Query:    57 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
              +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   115 YSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 147

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    90 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 143

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   144 NCSKTSEVNCYRCGESGHLAREC 166

 Score = 145 (56.1 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
 Identities = 28/64 (43%), Positives = 35/64 (54%)

Query:    36 LCNNCYKPGHIAADCT--NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQC 88
             +C  C + GH+A DC    DKAC NC + GHIA+DC     + E  C  C   GH+AR C
Sbjct:    47 ICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106

Query:    89 PKGD 92
                D
Sbjct:   107 DHAD 110

 Score = 140 (54.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
 Identities = 29/84 (34%), Positives = 42/84 (50%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC- 69
             C  CG+TGH AR+C T +  G  +R      + G      +    C  C ++GH+A+DC 
Sbjct:     6 CFKCGRTGHWARECPTGIGRGRGMRSRG---RAGFQFMSSSLPDICYRCGESGHLAKDCD 62

Query:    70 -QNEPVCNLCNIAGHVARQC--PK 90
              Q +  C  C   GH+A+ C  PK
Sbjct:    63 LQEDKACYNCGRGGHIAKDCKEPK 86

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   102 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 153

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   154 YRCGESGHLARECTIE 169

 Score = 87 (35.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   114 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 145

 Score = 87 (35.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query:   127 ICRSCNQMGHMSRDC-VGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC +     C NCG  GH+A +C
Sbjct:    47 ICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDC 82

 Score = 86 (35.3 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query:   125 DVICRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             D  C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    66 DKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106

 Score = 75 (31.5 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   130 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166

 Score = 53 (23.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C   GH AR+CP G
Sbjct:     6 CFKCGRTGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   150 EVNCYRCGESGHLAREC 166


>MGI|MGI:88431 [details] [associations]
            symbol:Cnbp "cellular nucleic acid binding protein"
            species:10090 "Mus musculus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0003727
            "single-stranded RNA binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            MGI:MGI:88431 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
            GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            CTD:7555 HOVERGEN:HBG000397 ChiTaRS:CNBP EMBL:L12693 EMBL:Z11870
            EMBL:X63866 EMBL:Z11871 EMBL:U20326 EMBL:AY176064 EMBL:AK075760
            EMBL:AK078427 EMBL:BC058723 IPI:IPI00137229 IPI:IPI00330767
            IPI:IPI00454151 PIR:I48297 PIR:I48298 PIR:I49259
            RefSeq:NP_001103215.1 RefSeq:NP_038521.1 UniGene:Mm.290251
            ProteinModelPortal:P53996 SMR:P53996 IntAct:P53996 STRING:P53996
            PhosphoSite:P53996 PaxDb:P53996 PRIDE:P53996
            Ensembl:ENSMUST00000032138 Ensembl:ENSMUST00000113619 GeneID:12785
            KEGG:mmu:12785 InParanoid:P53996 OMA:CPNGQGG NextBio:282182
            Bgee:P53996 CleanEx:MM_CNBP Genevestigator:P53996
            GermOnline:ENSMUSG00000030057 Uniprot:P53996
        Length = 178

 Score = 181 (68.8 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 36/88 (40%), Positives = 45/88 (51%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC            C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDEA-----CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 107

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   108 LARDCDHADEQKCYSCGEFGHIQKDCTK 135

 Score = 180 (68.4 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
 Identities = 35/94 (37%), Positives = 52/94 (55%)

Query:     1 MASNC--HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C    +  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C
Sbjct:    63 LAKDCDLQEDEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKC 120

Query:    57 KNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
              +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 YSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 153

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    96 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 149

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   150 NCSKTSEVNCYRCGESGHLAREC 172

 Score = 141 (54.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 27/64 (42%), Positives = 35/64 (54%)

Query:    36 LCNNCYKPGHIAADCT--NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQC 88
             +C  C + GH+A DC    D+AC NC + GHIA+DC     + E  C  C   GH+AR C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112

Query:    89 PKGD 92
                D
Sbjct:   113 DHAD 116

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   108 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 159

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   160 YRCGESGHLARECTIE 175

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/87 (32%), Positives = 40/87 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DC--QNEPVCNLCNIAGHVARQC--PK 90
             DC  Q +  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDEACYNCGRGGHIAKDCKEPK 92

 Score = 87 (35.7 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   120 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 151

 Score = 87 (35.7 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query:   127 ICRSCNQMGHMSRDC-VGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC +     C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDC 88

 Score = 86 (35.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query:   125 DVICRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             D  C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    72 DEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112

 Score = 75 (31.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   136 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172

 Score = 54 (24.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   156 EVNCYRCGESGHLAREC 172


>POMBASE|SPAC13D6.02c [details] [associations]
            symbol:byr3 "zinc finger protein Byr3" species:4896
            "Schizosaccharomyces pombe" [GO:0000747 "conjugation with cellular
            fusion" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0031137 "regulation of conjugation with cellular fusion"
            evidence=IGI] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 PomBase:SPAC13D6.02c GO:GO:0005829 EMBL:CU329670
            GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
            GO:GO:0008270 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GO:GO:0000747 EMBL:S45038 PIR:T37622 RefSeq:NP_593680.1
            ProteinModelPortal:P36627 STRING:P36627 PRIDE:P36627
            EnsemblFungi:SPAC13D6.02c.1 GeneID:2542829 KEGG:spo:SPAC13D6.02c
            HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS OrthoDB:EOG4K0TXR
            NextBio:20803871 GO:GO:0031137 Uniprot:P36627
        Length = 179

 Score = 169 (64.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 33/87 (37%), Positives = 47/87 (54%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN---DKACKNCRKTGHIAR 67
             C++CG+ GH+AR+C+     G    +C NC + GH A++CT    +K C  C   GH+ R
Sbjct:    19 CYNCGENGHQARECT----KGS---ICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVR 71

Query:    68 DCQNEP------VCNLCNIAGHVARQC 88
             DC + P       C  C   GH+AR C
Sbjct:    72 DCPSSPNPRQGAECYKCGRVGHIARDC 98

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 38/88 (43%), Positives = 46/88 (52%)

Query:    11 CHSCGKTGHRARDCSTH-VQSGGDL---RLCNNCY---KPGHIAADCTNDKACKNCRKTG 63
             C+ CG+ GH ARDC T+  QSGG     R   NCY     GH A DCT    C +C K G
Sbjct:    85 CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSCGKIG 144

Query:    64 HIARDCQNEP---VCNLCNIAGHVARQC 88
             H + +CQ      +C  CN  GH+A  C
Sbjct:   145 HRSFECQQASDGQLCYKCNQPGHIAVNC 172

 Score = 149 (57.5 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
 Identities = 26/56 (46%), Positives = 31/56 (55%)

Query:    37 CNNCYKPGHIAADCTNDKACKNCRKTGHIARDC---QNEPVCNLCNIAGHVARQCP 89
             C NC + GH A +CT    C NC +TGH A +C   Q E  C  C  AGH+ R CP
Sbjct:    19 CYNCGENGHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCP 74

 Score = 139 (54.0 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 34/110 (30%), Positives = 45/110 (40%)

Query:     2 ASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK------A 55
             A  C    IC++C +TGH+A +C+   Q     + C  C   GH+  DC +         
Sbjct:    29 ARECTKGSICYNCNQTGHKASECTEPQQE----KTCYACGTAGHLVRDCPSSPNPRQGAE 84

Query:    56 CKNCRKTGHIARDCQNEPV--------------CNLCNIAGHVARQCPKG 91
             C  C + GHIARDC+                  C  C   GH AR C  G
Sbjct:    85 CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG 134

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query:     2 ASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN 52
             A +C   G+ C+SCGK GHR+ +C    Q   D +LC  C +PGHIA +CT+
Sbjct:   128 ARDC-TMGVKCYSCGKIGHRSFEC----QQASDGQLCYKCNQPGHIAVNCTS 174

 Score = 97 (39.2 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
 Identities = 19/50 (38%), Positives = 25/50 (50%)

Query:   127 ICRSCNQMGHMSRDCVGPLI--ICRNCGGRGHMAYECPSGRIADRGYRRY 174
             IC +CNQ GH + +C  P     C  CG  GH+  +CPS     +G   Y
Sbjct:    37 ICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECY 86

 Score = 87 (35.7 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query:   128 CRSCNQMGHMSRDC-VGPLIICRNCGGRGHMAYEC 161
             C +C   GH +RDC +G  + C +CG  GH ++EC
Sbjct:   118 CYACGSYGHQARDCTMG--VKCYSCGKIGHRSFEC 150

 Score = 73 (30.8 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query:   126 VICRSCNQMGHMSRDC--VGPLIICRNCGGRGHMAYECPS 163
             V C SC ++GH S +C       +C  C   GH+A  C S
Sbjct:   135 VKCYSCGKIGHRSFECQQASDGQLCYKCNQPGHIAVNCTS 174

 Score = 62 (26.9 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
 Identities = 9/20 (45%), Positives = 14/20 (70%)

Query:   127 ICRSCNQMGHMSRDCVGPLI 146
             +C  CNQ GH++ +C  P+I
Sbjct:   158 LCYKCNQPGHIAVNCTSPVI 177

 Score = 62 (26.9 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
 Identities = 16/50 (32%), Positives = 22/50 (44%)

Query:   128 CRSCNQMGHMSRDCV-------GPL------IICRNCGGRGHMAYECPSG 164
             C  C ++GH++RDC        G        + C  CG  GH A +C  G
Sbjct:    85 CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMG 134

 Score = 54 (24.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
 Identities = 10/19 (52%), Positives = 11/19 (57%)

Query:    73 PVCNLCNIAGHVARQCPKG 91
             P C  C   GH AR+C KG
Sbjct:    17 PRCYNCGENGHQARECTKG 35


>UNIPROTKB|F1N8C2 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 OMA:FQFMSSS GeneTree:ENSGT00510000047065
            IPI:IPI00582111 EMBL:AADN02013931 Ensembl:ENSGALT00000036274
            ArrayExpress:F1N8C2 Uniprot:F1N8C2
        Length = 171

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    57 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 114

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   115 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 146

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    47 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 100

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   101 LARDCDHADEQKCYSCGEFGHIQKDCTK 128

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    89 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 142

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   143 NCSKTSEVNCYRCGESGHLAREC 165

 Score = 140 (54.3 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
 Identities = 29/83 (34%), Positives = 41/83 (49%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C  CG+TGH AR+C T +  G  +R      + G      +    C  C ++GH+A+DC 
Sbjct:     6 CFKCGRTGHWARECPTGIGRGRGMRSRG---RAGFQFMSSSLPDICYRCGESGHLAKDCD 62

Query:    71 -NEPVCNLCNIAGHVARQC--PK 90
               E  C  C   GH+A+ C  PK
Sbjct:    63 LQEDACYNCGRGGHIAKDCKEPK 85

 Score = 137 (53.3 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    47 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 106

Query:    90 KGD 92
               D
Sbjct:   107 HAD 109

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   101 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 152

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   153 YRCGESGHLARECTIE 168

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    47 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 81

 Score = 87 (35.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   113 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 144

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    68 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 105

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   129 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 165

 Score = 53 (23.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 10/17 (58%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C   GH AR+CP G
Sbjct:     6 CFKCGRTGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   149 EVNCYRCGESGHLAREC 165


>UNIPROTKB|P62633 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005783 "endoplasmic reticulum"
            evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0006695 "cholesterol biosynthetic process" evidence=TAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
            EMBL:CH471052 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0006695 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250 CTD:7555
            HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:M28372 EMBL:U19765
            EMBL:AY329622 EMBL:AK054592 EMBL:DQ092367 EMBL:DQ091187
            EMBL:AK314380 EMBL:BT019613 EMBL:AC108673 EMBL:AC135587
            EMBL:BC000288 EMBL:BC014911 EMBL:BC093058 IPI:IPI00430812
            IPI:IPI00430813 IPI:IPI00430814 IPI:IPI00895911 IPI:IPI00967344
            PIR:A32760 RefSeq:NP_001120665.1 RefSeq:NP_001120666.1
            RefSeq:NP_001120668.1 RefSeq:NP_003409.1 UniGene:Hs.518249
            ProteinModelPortal:P62633 SMR:P62633 IntAct:P62633 STRING:P62633
            PhosphoSite:P62633 DMDM:50401852 PaxDb:P62633 PRIDE:P62633
            DNASU:7555 Ensembl:ENST00000422453 Ensembl:ENST00000446936
            Ensembl:ENST00000451728 Ensembl:ENST00000502976
            Ensembl:ENST00000504813 GeneID:7555 KEGG:hsa:7555 UCSC:uc003elq.4
            UCSC:uc003elr.4 GeneCards:GC03M128886 HGNC:HGNC:13164 MIM:116955
            MIM:602668 neXtProt:NX_P62633 Orphanet:606 PharmGKB:PA37737
            InParanoid:P62633 PhylomeDB:P62633 ChiTaRS:CNBP GenomeRNAi:7555
            NextBio:29559 ArrayExpress:P62633 Bgee:P62633 CleanEx:HS_CNBP
            Genevestigator:P62633 GermOnline:ENSG00000169714 Uniprot:P62633
        Length = 177

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDCTK 134

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    95 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 148

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   149 NCSKTSEVNCYRCGESGHLAREC 171

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112

Query:    90 KGD 92
               D
Sbjct:   113 HAD 115

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   159 YRCGESGHLARECTIE 174

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/86 (32%), Positives = 39/86 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPVCNLCNIAGHVARQC--PK 90
             DC   E  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDACYNCGRGGHIAKDCKEPK 91

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 54 (24.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   155 EVNCYRCGESGHLAREC 171


>UNIPROTKB|Q4R501 [details] [associations]
            symbol:Q4R501 "Brain cDNA, clone: QnpA-14556, similar to
            human zinc finger protein 9 (a cellular retroviral nucleicacid
            binding protein) (ZNF9)," species:9541 "Macaca fascicularis"
            [GO:0005634 "nucleus" evidence=ISS] [GO:0005783 "endoplasmic
            reticulum" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005783 GO:GO:0005829 GO:GO:0005634 GO:GO:0046872
            GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOVERGEN:HBG000397 EMBL:AB169743
            EMBL:AB174174 ProteinModelPortal:Q4R501 SMR:Q4R501 PRIDE:Q4R501
            Uniprot:Q4R501
        Length = 177

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDCTK 134

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    95 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 148

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   149 NCSKTSEVNCYRCGESGHLAREC 171

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112

Query:    90 KGD 92
               D
Sbjct:   113 HAD 115

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   159 YRCGESGHLARECTIE 174

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/86 (32%), Positives = 39/86 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPVCNLCNIAGHVARQC--PK 90
             DC   E  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDACYNCGRGGHIAKDCKEPK 91

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 54 (24.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   155 EVNCYRCGESGHLAREC 171


>UNIPROTKB|Q5R5R5 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0005829
            "cytosol" evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0003677 GO:GO:0008284 GO:GO:0008270
            GO:GO:0045944 GO:GO:0006351 Gene3D:4.10.60.10 SUPFAM:SSF57756
            KO:K09250 CTD:7555 GeneTree:ENSGT00510000047065 HOVERGEN:HBG000397
            OMA:CPNGQGG EMBL:CR860791 RefSeq:NP_001126703.1 UniGene:Pab.18652
            ProteinModelPortal:Q5R5R5 SMR:Q5R5R5 PRIDE:Q5R5R5
            Ensembl:ENSPPYT00000015613 GeneID:100173703 KEGG:pon:100173703
            InParanoid:Q5R5R5 Uniprot:Q5R5R5
        Length = 177

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDCTK 134

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    95 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 148

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   149 NCSKTSEVNCYRCGESGHLAREC 171

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112

Query:    90 KGD 92
               D
Sbjct:   113 HAD 115

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   159 YRCGESGHLARECTIE 174

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/86 (32%), Positives = 39/86 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPVCNLCNIAGHVARQC--PK 90
             DC   E  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDACYNCGRGGHIAKDCKEPK 91

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 54 (24.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   155 EVNCYRCGESGHLAREC 171


>RGD|621807 [details] [associations]
            symbol:Cnbp "CCHC-type zinc finger, nucleic acid binding protein"
            species:10116 "Rattus norvegicus" [GO:0003697 "single-stranded DNA
            binding" evidence=IDA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005783
            "endoplasmic reticulum" evidence=ISO;ISS] [GO:0005829 "cytosol"
            evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISO;ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;ISS] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 RGD:621807 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0003727 GO:GO:0045944 GO:GO:0006351
            GO:GO:0003697 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 CTD:7555 HOVERGEN:HBG000397
            OrthoDB:EOG45HRZN EMBL:D45254 EMBL:AF242550 EMBL:AY329624
            EMBL:AB158421 EMBL:AB158422 EMBL:BC062225 IPI:IPI00201505
            PIR:JC2512 RefSeq:NP_072120.1 UniGene:Rn.6187
            ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
            PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
            InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
            Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
        Length = 177

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDCTK 134

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    95 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 148

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   149 NCSKTSEVNCYRCGESGHLAREC 171

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112

Query:    90 KGD 92
               D
Sbjct:   113 HAD 115

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   159 YRCGESGHLARECTIE 174

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/86 (32%), Positives = 39/86 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPVCNLCNIAGHVARQC--PK 90
             DC   E  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDACYNCGRGGHIAKDCKEPK 91

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 54 (24.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   155 EVNCYRCGESGHLAREC 171


>UNIPROTKB|P62634 [details] [associations]
            symbol:Cnbp "Cellular nucleic acid-binding protein"
            species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
            evidence=ISS] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 RGD:621807 GO:GO:0005783 GO:GO:0005829 GO:GO:0005634
            GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0003727
            GO:GO:0045944 GO:GO:0006351 GO:GO:0003697 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            CTD:7555 HOVERGEN:HBG000397 OrthoDB:EOG45HRZN EMBL:D45254
            EMBL:AF242550 EMBL:AY329624 EMBL:AB158421 EMBL:AB158422
            EMBL:BC062225 IPI:IPI00201505 PIR:JC2512 RefSeq:NP_072120.1
            UniGene:Rn.6187 ProteinModelPortal:P62634 SMR:P62634 STRING:P62634
            PhosphoSite:P62634 PRIDE:P62634 GeneID:64530 KEGG:rno:64530
            InParanoid:P62634 NextBio:613366 ArrayExpress:P62634
            Genevestigator:P62634 GermOnline:ENSRNOG00000010239 Uniprot:P62634
        Length = 177

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    63 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 120

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   121 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 152

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    53 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 106

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDCTK 134

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    95 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 148

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   149 NCSKTSEVNCYRCGESGHLAREC 171

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 112

Query:    90 KGD 92
               D
Sbjct:   113 HAD 115

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   107 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 158

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   159 YRCGESGHLARECTIE 174

 Score = 124 (48.7 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 28/86 (32%), Positives = 39/86 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNN---CYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C  CG++GH AR+C T    G  +R           G      +    C  C ++GH+A+
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAK 65

Query:    68 DCQ-NEPVCNLCNIAGHVARQC--PK 90
             DC   E  C  C   GH+A+ C  PK
Sbjct:    66 DCDLQEDACYNCGRGGHIAKDCKEPK 91

 Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:    53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 87

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   119 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 150

 Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C + GH+++DC  P       C NCG  GH+A +C
Sbjct:    74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   135 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 171

 Score = 54 (24.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C  +GH AR+CP G
Sbjct:     6 CFKCGRSGHWARECPTG 22

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   155 EVNCYRCGESGHLAREC 171


>UNIPROTKB|Q3T0Q6 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9913 "Bos taurus" [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0005783 GO:GO:0005829
            GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262 KO:K09250
            OMA:FQFMSSS EMBL:BC102298 IPI:IPI00697831 RefSeq:NP_001029396.1
            UniGene:Bt.9541 ProteinModelPortal:Q3T0Q6 STRING:Q3T0Q6
            PRIDE:Q3T0Q6 Ensembl:ENSBTAT00000016130 GeneID:504831
            KEGG:bta:504831 CTD:7555 GeneTree:ENSGT00510000047065
            HOVERGEN:HBG000397 InParanoid:Q3T0Q6 OrthoDB:EOG45HRZN
            NextBio:20866851 Uniprot:Q3T0Q6
        Length = 170

 Score = 185 (70.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 36/93 (38%), Positives = 52/93 (55%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    56 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 113

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   114 SCGEFGHIQKDC-TKVKCYRCGETGHVAINCSK 145

 Score = 180 (68.4 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:    46 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 99

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:   100 LARDCDHADEQKCYSCGEFGHIQKDCTK 127

 Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H     D + C +C + GHI  DCT  K C  C +TGH+A 
Sbjct:    88 EQCCYNCGKPGHLARDCD-HA----DEQKCYSCGEFGHIQKDCTKVK-CYRCGETGHVAI 141

Query:    68 DCQ--NEPVCNLCNIAGHVARQC 88
             +C   +E  C  C  +GH+AR+C
Sbjct:   142 NCSKTSEVNCYRCGESGHLAREC 164

 Score = 163 (62.4 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
 Identities = 37/103 (35%), Positives = 49/103 (47%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR---------------LCNNCYKPGHIAADCT-NDK 54
             C  CG++GH AR+C T    G  +R               +C  C + GH+A DC   + 
Sbjct:     6 CFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDCDLQED 65

Query:    55 ACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCPKGD 92
             AC NC + GHIA+DC     + E  C  C   GH+AR C   D
Sbjct:    66 ACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHAD 108

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 29/76 (38%), Positives = 45/76 (59%)

Query:     1 MASNC-H-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKAC 56
             +A +C H +E  C+SCG+ GH  +DC T V+       C  C + GH+A +C  T++  C
Sbjct:   100 LARDCDHADEQKCYSCGEFGHIQKDC-TKVK-------CYRCGETGHVAINCSKTSEVNC 151

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+AR+C  E
Sbjct:   152 YRCGESGHLARECTIE 167

 Score = 87 (35.7 bits), Expect = 7.3e-20, Sum P(2) = 7.3e-20
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   112 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 143

 Score = 75 (31.5 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C + GH++ +C     + C  CG  GH+A EC
Sbjct:   128 VKCYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164

 Score = 52 (23.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C  C + GH++R+C
Sbjct:   148 EVNCYRCGESGHLAREC 164


>UNIPROTKB|G3MZ41 [details] [associations]
            symbol:ZCCHC13 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000047065 OMA:SSKECFK EMBL:DAAA02072583
            Ensembl:ENSBTAT00000001124 Uniprot:G3MZ41
        Length = 175

 Score = 188 (71.2 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
 Identities = 37/92 (40%), Positives = 53/92 (57%)

Query:     2 ASNCHN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--DKACKN 58
             A +C   + IC++CGK+GH A+DC+   + G   R C  C +PGH+A DC    ++ C +
Sbjct:    62 AKDCDLLDDICYNCGKSGHIAKDCAEPKREGE--RCCYTCGRPGHLARDCDRQEERKCYS 119

Query:    59 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C K+GHI + C  +  C  C   GHVA  C K
Sbjct:   120 CGKSGHIQKYC-TQVKCYRCGEIGHVAINCRK 150

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 35/84 (41%), Positives = 47/84 (55%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CG+ GH ARDC    +     R C +C K GHI   CT  K C  C + GH+A 
Sbjct:    93 ERCCYTCGRPGHLARDCDRQEE-----RKCYSCGKSGHIQKYCTQVK-CYRCGEIGHVAI 146

Query:    68 DCQ--NEPVCNLCNIAGHVARQCP 89
             +C+  NE  C  C  +GH+ R+CP
Sbjct:   147 NCRKMNEVNCYRCGESGHLTRECP 170

 Score = 176 (67.0 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 37/86 (43%), Positives = 45/86 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CGK GH A+DC        D+  C NC K GHIA DC   K      C  C + GH
Sbjct:    51 ICYRCGKFGHYAKDCDLL----DDI--CYNCGKSGHIAKDCAEPKREGERCCYTCGRPGH 104

Query:    65 IARDC--QNEPVCNLCNIAGHVARQC 88
             +ARDC  Q E  C  C  +GH+ + C
Sbjct:   105 LARDCDRQEERKCYSCGKSGHIQKYC 130

 Score = 122 (48.0 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 31/86 (36%), Positives = 40/86 (46%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA---CKNCRKTGHIAR 67
             C  CG+ GH A  CS     GG  R        GH  A C++      C  C K GH A+
Sbjct:    10 CFKCGRVGHWAPACS----KGGGAR-GRGARGRGH-GAQCSSTTLPVICYRCGKFGHYAK 63

Query:    68 DCQN-EPVCNLCNIAGHVARQC--PK 90
             DC   + +C  C  +GH+A+ C  PK
Sbjct:    64 DCDLLDDICYNCGKSGHIAKDCAEPK 89

 Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:     1 MASNC--HNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKAC 56
             +A +C    E  C+SCGK+GH  + C T V+       C  C + GH+A +C   N+  C
Sbjct:   105 LARDCDRQEERKCYSCGKSGHIQKYC-TQVK-------CYRCGEIGHVAINCRKMNEVNC 156

Query:    57 KNCRKTGHIARDCQNE 72
               C ++GH+ R+C  E
Sbjct:   157 YRCGESGHLTRECPIE 172

 Score = 95 (38.5 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 17/36 (47%), Positives = 22/36 (61%)

Query:   126 VICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             VIC  C + GH ++DC     IC NCG  GH+A +C
Sbjct:    50 VICYRCGKFGHYAKDCDLLDDICYNCGKSGHIAKDC 85

 Score = 88 (36.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query:   125 DVICRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             D IC +C + GH+++DC  P       C  CG  GH+A +C
Sbjct:    69 DDICYNCGKSGHIAKDCAEPKREGERCCYTCGRPGHLARDC 109

 Score = 77 (32.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYECP 162
             V C  C ++GH++ +C     + C  CG  GH+  ECP
Sbjct:   133 VKCYRCGEIGHVAINCRKMNEVNCYRCGESGHLTRECP 170

 Score = 74 (31.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ + C    + C  CG  GH+A  C
Sbjct:   117 CYSCGKSGHIQKYCTQ--VKCYRCGEIGHVAINC 148

 Score = 68 (29.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 20/63 (31%), Positives = 27/63 (42%)

Query:    37 CNNCYKPGHIAADCTNDKACKN--CRKTGHIARDCQNE--PV-CNLCNIAGHVARQCPKG 91
             C  C + GH A  C+     +    R  GH A+ C +   PV C  C   GH A+ C   
Sbjct:    10 CFKCGRVGHWAPACSKGGGARGRGARGRGHGAQ-CSSTTLPVICYRCGKFGHYAKDCDLL 68

Query:    92 DSL 94
             D +
Sbjct:    69 DDI 71

 Score = 53 (23.7 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
 Identities = 7/18 (38%), Positives = 13/18 (72%)

Query:   124 HDVICRSCNQMGHMSRDC 141
             ++V C  C + GH++R+C
Sbjct:   152 NEVNCYRCGESGHLTREC 169

 Score = 40 (19.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 7/18 (38%), Positives = 9/18 (50%)

Query:    52 NDKACKNCRKTGHIARDC 69
             + K C  C + GH A  C
Sbjct:     6 SSKECFKCGRVGHWAPAC 23


>ZFIN|ZDB-GENE-030131-5045 [details] [associations]
            symbol:cnbpa "CCHC-type zinc finger, nucleic acid
            binding protein a" species:7955 "Danio rerio" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0060322 "head development" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP] [GO:0014036
            "neural crest cell fate specification" evidence=IMP] [GO:0051216
            "cartilage development" evidence=IMP] [GO:0003697 "single-stranded
            DNA binding" evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            ZFIN:ZDB-GENE-030131-5045 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
            GO:GO:0003697 GO:GO:0051216 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 HOVERGEN:HBG000397 GO:GO:0060322 GO:GO:0014036
            InterPro:IPR025836 Pfam:PF14392 EMBL:AY228240 IPI:IPI00481422
            UniGene:Dr.31379 STRING:Q801Z9 InParanoid:Q801Z9
            ArrayExpress:Q801Z9 Uniprot:Q801Z9
        Length = 163

 Score = 173 (66.0 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 36/90 (40%), Positives = 47/90 (52%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR------LCNNCYKPGHIAADCTN-DKACKNCRKTG 63
             C  CG++GH  ++C    +  G  R       C  C + GHIA DC   + AC NC ++G
Sbjct:     8 CFGCGRSGHWIKNCPNAGRGRGRGRGRGKDLFCYRCGEQGHIARDCEQTEDACYNCHRSG 67

Query:    64 HIARDC-----QNEPVCNLCNIAGHVARQC 88
             HI+RDC     + E  C  C  AGHVAR C
Sbjct:    68 HISRDCKEPKKEREQCCYNCGKAGHVARDC 97

 Score = 165 (63.1 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
 Identities = 34/93 (36%), Positives = 50/93 (53%)

Query:     1 MASNCHN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++C ++GH +RDC    +     + C NC K GH+A DC   N++ C 
Sbjct:    49 IARDCEQTEDACYNCHRSGHISRDCKEPKKERE--QCCYNCGKAGHVARDCDHANEQKCY 106

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             +C   GH  + C ++  C  C   GHVA QC K
Sbjct:   107 SCGGFGHFQKLC-DKVKCYRCGEIGHVAVQCSK 138

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 32/83 (38%), Positives = 39/83 (46%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             E  C++CGK GH ARDC  H       + C +C   GH    C   K C  C + GH+A 
Sbjct:    81 EQCCYNCGKAGHVARDCD-HANE----QKCYSCGGFGHFQKLCDKVK-CYRCGEIGHVAV 134

Query:    68 DCQN--EPVCNLCNIAGHVARQC 88
              C    E  C  C   GH+AR C
Sbjct:   135 QCSKATEVNCYNCGKTGHLARDC 157

 Score = 92 (37.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             C +C++ GH+SRDC  P       C NCG  GH+A +C
Sbjct:    60 CYNCHRSGHISRDCKEPKKEREQCCYNCGKAGHVARDC 97

 Score = 90 (36.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query:   125 DVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             D+ C  C + GH++RDC      C NC   GH++ +C
Sbjct:    37 DLFCYRCGEQGHIARDCEQTEDACYNCHRSGHISRDC 73

 Score = 80 (33.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query:   126 VICRSCNQMGHMSRDCVGPLII-CRNCGGRGHMAYEC 161
             V C  C ++GH++  C     + C NCG  GH+A +C
Sbjct:   121 VKCYRCGEIGHVAVQCSKATEVNCYNCGKTGHLARDC 157

 Score = 57 (25.1 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query:   125 DVICRSCNQMGHMSRDC 141
             +V C +C + GH++RDC
Sbjct:   141 EVNCYNCGKTGHLARDC 157

 Score = 37 (18.1 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query:    75 CNLCNIAGHVARQCP 89
             C  C  +GH  + CP
Sbjct:     8 CFGCGRSGHWIKNCP 22


>UNIPROTKB|G4N4A8 [details] [associations]
            symbol:MGG_05948 "Zinc knuckle domain-containing protein"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CM001233 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
            RefSeq:XP_003711783.1 ProteinModelPortal:G4N4A8
            EnsemblFungi:MGG_05948T0 GeneID:2684027 KEGG:mgr:MGG_05948
            Uniprot:G4N4A8
        Length = 199

 Score = 152 (58.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 32/70 (45%), Positives = 38/70 (54%)

Query:    29 QSGG-DLRLCNNCYKPGHIAADCTNDKA--CKNCRKTGHIARDCQNEP----VCNLCNIA 81
             QSGG   R C  C +P H A DC N  A  C NC   GHI+R C  EP    +C  C+  
Sbjct:     7 QSGGAGGRTCYTCGQPNHQARDCPNRGAAKCYNCGGEGHISRACPEEPKDQKICYRCSQP 66

Query:    82 GHVARQCPKG 91
             GH++R CP G
Sbjct:    67 GHISRDCPSG 76

 Score = 141 (54.7 bits), Expect = 8.1e-19, Sum P(2) = 8.1e-19
 Identities = 35/100 (35%), Positives = 46/100 (46%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND----KACKNCRKTGHIA 66
             C++CG+  H+ARDC       G  + C NC   GHI+  C  +    K C  C + GHI+
Sbjct:    16 CYTCGQPNHQARDCPNR----GAAK-CYNCGGEGHISRACPEEPKDQKICYRCSQPGHIS 70

Query:    67 RDC--------------QNEPV-CNLCNIAGHVARQCPKG 91
             RDC              Q+    C  C   GH+AR C KG
Sbjct:    71 RDCPSGGAGGGGGGGGGQSSGAECYKCGEVGHIARNCSKG 110

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 26/65 (40%), Positives = 35/65 (53%)

Query:    30 SGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQN-----EPVCNLCNIAGHV 84
             +GG  + C +C   GH++ DC N   C NC +TGH +RDC       E +C  C   GHV
Sbjct:   135 AGG--KTCYSCGGVGHMSRDCVNGSKCYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHV 192

Query:    85 ARQCP 89
               +CP
Sbjct:   193 QAECP 197

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 22/53 (41%), Positives = 35/53 (66%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND 53
             M+ +C N   C++CG+TGH +RDCS    +G   ++C  C +PGH+ A+C N+
Sbjct:   149 MSRDCVNGSKCYNCGETGHFSRDCSKRSTTGE--KMCYKCQQPGHVQAECPNN 199

 Score = 130 (50.8 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
 Identities = 29/83 (34%), Positives = 37/83 (44%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             C+ CG+ GH AR+CS     GG           Y  G+        K C +C   GH++R
Sbjct:    94 CYKCGEVGHIARNCSKGGYGGGGGGGYSGGGGGYGGGYGGG--AGGKTCYSCGGVGHMSR 151

Query:    68 DCQNEPVCNLCNIAGHVARQCPK 90
             DC N   C  C   GH +R C K
Sbjct:   152 DCVNGSKCYNCGETGHFSRDCSK 174

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHI 65
             C+SCG  GH +RDC     +G     C NC + GH + DC     T +K C  C++ GH+
Sbjct:   140 CYSCGGVGHMSRDCV----NGSK---CYNCGETGHFSRDCSKRSTTGEKMCYKCQQPGHV 192

Query:    66 ARDCQN 71
               +C N
Sbjct:   193 QAECPN 198

 Score = 99 (39.9 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 18/34 (52%), Positives = 21/34 (61%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC  +GHMSRDCV     C NCG  GH + +C
Sbjct:   140 CYSCGGVGHMSRDCVNGSK-CYNCGETGHFSRDC 172

 Score = 78 (32.5 bits), Expect = 8.9e-18, Sum P(2) = 8.9e-18
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query:   128 CRSCNQMGHMSRDC-----VGPLIICRNCGGRGHMAYECPS 163
             C +C + GH SRDC      G  + C  C   GH+  ECP+
Sbjct:   159 CYNCGETGHFSRDCSKRSTTGEKM-CYKCQQPGHVQAECPN 198

 Score = 60 (26.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 9/17 (52%), Positives = 13/17 (76%)

Query:   148 CRNCGGRGHMAYECPSG 164
             C +CGG GHM+ +C +G
Sbjct:   140 CYSCGGVGHMSRDCVNG 156

 Score = 45 (20.9 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
 Identities = 6/15 (40%), Positives = 9/15 (60%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C  C Q GH+  +C
Sbjct:   182 MCYKCQQPGHVQAEC 196


>CGD|CAL0002417 [details] [associations]
            symbol:GIS2 species:5476 "Candida albicans" [GO:0070417
            "cellular response to cold" evidence=IMP] [GO:0003676 "nucleic acid
            binding" evidence=NAS] [GO:0071470 "cellular response to osmotic
            stress" evidence=IMP] [GO:0035690 "cellular response to drug"
            evidence=IMP] [GO:0042788 "polysomal ribosome" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0000747 "conjugation with cellular fusion"
            evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
            fusion" evidence=IEA] [GO:0045727 "positive regulation of
            translation" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0045182
            "translation regulator activity" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 CGD:CAL0002417
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0035690
            EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470 GO:GO:0070417
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
            RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
            GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
            KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
        Length = 175

 Score = 161 (61.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 33/91 (36%), Positives = 45/91 (49%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-----CKNCRKTGHI 65
             C+ CG+ GH A DC        + RLC NC+KPGH + DC + K      C +C   GHI
Sbjct:     9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62

Query:    66 ARDCQNEPV---CNLCNIAGHVARQCPKGDS 93
               +C N+     C  C   GH+++ C    S
Sbjct:    63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPS 93

 Score = 137 (53.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query:     1 MASNCHNEG-ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA---C 56
             +A +C  E  +C++C K GH + DC    Q+    + C +C   GHI  +C N      C
Sbjct:    18 VADDCQQEERLCYNCHKPGHESNDCPDPKQNTA--KQCYSCGDVGHIQTECPNQAQGAKC 75

Query:    57 KNCRKTGHIARDCQNEP 73
              NC + GHI+++C + P
Sbjct:    76 YNCGQFGHISKNCDSAP 92

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 33/110 (30%), Positives = 51/110 (46%)

Query:     3 SNCHNE--GI-CHSCGKTGHRARDCSTHVQSGGDL--------RLCNN-CYK---PGHIA 47
             + C N+  G  C++CG+ GH +++C +   S  +         R     CYK   P H A
Sbjct:    64 TECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFA 123

Query:    48 ADC-TNDKACKNCRKTGHIARDCQNEP--------VCNLCNIAGHVARQC 88
              DC  N   C  C K GHI++DC +           C  C  +GH++++C
Sbjct:   124 RDCQANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173

 Score = 123 (48.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query:    35 RLCNNCYKPGHIAADCTND-KACKNCRKTGHIARDC----QNEPV-CNLCNIAGHVARQC 88
             R C  C + GH+A DC  + + C NC K GH + DC    QN    C  C   GH+  +C
Sbjct:     7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66

Query:    89 P 89
             P
Sbjct:    67 P 67

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query:     2 ASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIAADCT 51
             A +C    + C++CGK GH ++DC  H  +GG     + C NC K GHI+ +CT
Sbjct:   123 ARDCQANTVKCYACGKVGHISKDC--HSSAGGSNFSAKTCYNCGKSGHISKECT 174

 Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 22/78 (28%), Positives = 31/78 (39%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C+SCG  GH   +C    Q       C NC + GHI+ +C +  +  N   +        
Sbjct:    53 CYSCGDVGHIQTECPNQAQGAK----CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRA 108

Query:    71 NEPVCNLCNIAGHVARQC 88
             +   C  C    H AR C
Sbjct:   109 SGTTCYKCGGPNHFARDC 126

 Score = 81 (33.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query:   126 VICRSCNQMGHMSRDC---VG----PLIICRNCGGRGHMAYEC 161
             V C +C ++GH+S+DC    G        C NCG  GH++ EC
Sbjct:   131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173

 Score = 78 (32.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C  C    H +RDC    + C  CG  GH++ +C S
Sbjct:   113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148

 Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query:   148 CRNCGGRGHMAYECPSGRI 166
             C  CGG  H A +C +  +
Sbjct:   113 CYKCGGPNHFARDCQANTV 131


>UNIPROTKB|Q59YJ9 [details] [associations]
            symbol:GIS2 "Putative uncharacterized protein GIS2"
            species:237561 "Candida albicans SC5314" [GO:0003676 "nucleic acid
            binding" evidence=NAS] [GO:0035690 "cellular response to drug"
            evidence=IMP] [GO:0070417 "cellular response to cold" evidence=IMP]
            [GO:0071470 "cellular response to osmotic stress" evidence=IMP]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            CGD:CAL0002417 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            GO:GO:0035690 EMBL:AACQ01000100 EMBL:AACQ01000097 GO:GO:0071470
            GO:GO:0070417 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 RefSeq:XP_714599.1
            RefSeq:XP_714730.1 ProteinModelPortal:Q59YJ9 STRING:Q59YJ9
            GeneID:3643638 GeneID:3643744 KEGG:cal:CaO19.10692
            KEGG:cal:CaO19.3182 Uniprot:Q59YJ9
        Length = 175

 Score = 161 (61.7 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 33/91 (36%), Positives = 45/91 (49%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-----CKNCRKTGHI 65
             C+ CG+ GH A DC        + RLC NC+KPGH + DC + K      C +C   GHI
Sbjct:     9 CYKCGEVGHVADDCQQ------EERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHI 62

Query:    66 ARDCQNEPV---CNLCNIAGHVARQCPKGDS 93
               +C N+     C  C   GH+++ C    S
Sbjct:    63 QTECPNQAQGAKCYNCGQFGHISKNCDSAPS 93

 Score = 137 (53.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
 Identities = 26/77 (33%), Positives = 41/77 (53%)

Query:     1 MASNCHNEG-ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA---C 56
             +A +C  E  +C++C K GH + DC    Q+    + C +C   GHI  +C N      C
Sbjct:    18 VADDCQQEERLCYNCHKPGHESNDCPDPKQNTA--KQCYSCGDVGHIQTECPNQAQGAKC 75

Query:    57 KNCRKTGHIARDCQNEP 73
              NC + GHI+++C + P
Sbjct:    76 YNCGQFGHISKNCDSAP 92

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 33/110 (30%), Positives = 51/110 (46%)

Query:     3 SNCHNE--GI-CHSCGKTGHRARDCSTHVQSGGDL--------RLCNN-CYK---PGHIA 47
             + C N+  G  C++CG+ GH +++C +   S  +         R     CYK   P H A
Sbjct:    64 TECPNQAQGAKCYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRASGTTCYKCGGPNHFA 123

Query:    48 ADC-TNDKACKNCRKTGHIARDCQNEP--------VCNLCNIAGHVARQC 88
              DC  N   C  C K GHI++DC +           C  C  +GH++++C
Sbjct:   124 RDCQANTVKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173

 Score = 123 (48.4 bits), Expect = 4.5e-15, Sum P(2) = 4.5e-15
 Identities = 24/61 (39%), Positives = 31/61 (50%)

Query:    35 RLCNNCYKPGHIAADCTND-KACKNCRKTGHIARDC----QNEPV-CNLCNIAGHVARQC 88
             R C  C + GH+A DC  + + C NC K GH + DC    QN    C  C   GH+  +C
Sbjct:     7 RTCYKCGEVGHVADDCQQEERLCYNCHKPGHESNDCPDPKQNTAKQCYSCGDVGHIQTEC 66

Query:    89 P 89
             P
Sbjct:    67 P 67

 Score = 116 (45.9 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 22/54 (40%), Positives = 32/54 (59%)

Query:     2 ASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGD---LRLCNNCYKPGHIAADCT 51
             A +C    + C++CGK GH ++DC  H  +GG     + C NC K GHI+ +CT
Sbjct:   123 ARDCQANTVKCYACGKVGHISKDC--HSSAGGSNFSAKTCYNCGKSGHISKECT 174

 Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 22/78 (28%), Positives = 31/78 (39%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C+SCG  GH   +C    Q       C NC + GHI+ +C +  +  N   +        
Sbjct:    53 CYSCGDVGHIQTECPNQAQGAK----CYNCGQFGHISKNCDSAPSSTNNAPSFKRPSGRA 108

Query:    71 NEPVCNLCNIAGHVARQC 88
             +   C  C    H AR C
Sbjct:   109 SGTTCYKCGGPNHFARDC 126

 Score = 81 (33.6 bits), Expect = 5.0e-19, Sum P(2) = 5.0e-19
 Identities = 17/43 (39%), Positives = 24/43 (55%)

Query:   126 VICRSCNQMGHMSRDC---VG----PLIICRNCGGRGHMAYEC 161
             V C +C ++GH+S+DC    G        C NCG  GH++ EC
Sbjct:   131 VKCYACGKVGHISKDCHSSAGGSNFSAKTCYNCGKSGHISKEC 173

 Score = 78 (32.5 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C  C    H +RDC    + C  CG  GH++ +C S
Sbjct:   113 CYKCGGPNHFARDCQANTVKCYACGKVGHISKDCHS 148

 Score = 49 (22.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query:   148 CRNCGGRGHMAYECPSGRI 166
             C  CGG  H A +C +  +
Sbjct:   113 CYKCGGPNHFARDCQANTV 131


>UNIPROTKB|G4MRA3 [details] [associations]
            symbol:MGG_13778 "Zinc finger protein GIS2" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:CM001231 KO:K09250 RefSeq:XP_003710840.1
            ProteinModelPortal:G4MRA3 EnsemblFungi:MGG_13778T0 GeneID:5048998
            KEGG:mgr:MGG_13778 Uniprot:G4MRA3
        Length = 230

 Score = 141 (54.7 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 33/92 (35%), Positives = 42/92 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHI 65
             C+ CG  GH A  CS+        RLC NC +PGH +  C     T  K C +C+  GH+
Sbjct:     9 CYKCGNVGHYAEVCSSAE------RLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHV 62

Query:    66 ARDCQNEPV--------CNLCNIAGHVARQCP 89
               DC    +        C  C   GH+AR CP
Sbjct:    63 QADCPTLRLSGAGSNGRCYSCGQPGHLARACP 94

 Score = 120 (47.3 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 32/101 (31%), Positives = 41/101 (40%)

Query:     3 SNCHNEGICHSCGKTGHRARDCSTH--VQSGGDLRLCNNCYKPGHIA----ADCTNDKAC 56
             S   + G C+SCG+ GH AR C        G    +    Y  G+      A       C
Sbjct:    72 SGAGSNGRCYSCGQPGHLARACPNPNGANMGRGAPVPRGGYGGGYGGRGGFAGGARPATC 131

Query:    57 KNCRKTGHIARDCQNEPV-CNLCNIAGHVARQC--PKGDSL 94
               C    H ARDCQ + + C  C   GH++R C  P G  L
Sbjct:   132 YKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPL 172

 Score = 119 (46.9 bits), Expect = 3.7e-07, P = 3.7e-07
 Identities = 26/63 (41%), Positives = 30/63 (47%)

Query:    37 CNNCYKPGHIAADC-TNDKACKNCRKTGHIARDC---QNEPV------CNLCNIAGHVAR 86
             C  C  P H A DC      C  C K GHI+RDC      P+      C  C  AGH++R
Sbjct:   131 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISR 190

Query:    87 QCP 89
             QCP
Sbjct:   191 QCP 193

 Score = 107 (42.7 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
 Identities = 24/85 (28%), Positives = 41/85 (48%)

Query:     2 ASNCHN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--------N 52
             A  C + E +C++C + GH +  C   +    + + C +C   GH+ ADC         +
Sbjct:    19 AEVCSSAERLCYNCKQPGHESNGCP--LPRTTEAKQCYHCQGLGHVQADCPTLRLSGAGS 76

Query:    53 DKACKNCRKTGHIARDCQNEPVCNL 77
             +  C +C + GH+AR C N    N+
Sbjct:    77 NGRCYSCGQPGHLARACPNPNGANM 101

 Score = 102 (41.0 bits), Expect = 0.00031, P = 0.00031
 Identities = 23/62 (37%), Positives = 34/62 (54%)

Query:     2 ASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDL----RLCNNCYKPGHIAADCTNDKAC 56
             A +C  + + C++CGK GH +RDC+    +GG L    + C  C + GHI+  C   KA 
Sbjct:   141 ARDCQAQAMKCYACGKLGHISRDCTA--PNGGPLNTVGKTCYQCGEAGHISRQCPT-KAT 197

Query:    57 KN 58
              N
Sbjct:   198 AN 199

 Score = 95 (38.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 19/49 (38%), Positives = 28/49 (57%)

Query:   128 CRSCNQMGHMSRDCV----GPLII----CRNCGGRGHMAYECPSGRIAD 168
             C +C ++GH+SRDC     GPL      C  CG  GH++ +CP+   A+
Sbjct:   151 CYACGKLGHISRDCTAPNGGPLNTVGKTCYQCGEAGHISRQCPTKATAN 199

 Score = 95 (38.5 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
 Identities = 20/61 (32%), Positives = 27/61 (44%)

Query:    35 RLCNNCYKPGHIAADCTN-DKACKNCRKTGHIARDCQ-----NEPVCNLCNIAGHVARQC 88
             R C  C   GH A  C++ ++ C NC++ GH +  C          C  C   GHV   C
Sbjct:     7 RACYKCGNVGHYAEVCSSAERLCYNCKQPGHESNGCPLPRTTEAKQCYHCQGLGHVQADC 66

Query:    89 P 89
             P
Sbjct:    67 P 67

 Score = 81 (33.6 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query:   122 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--PSG 164
             G     C  C    H +RDC    + C  CG  GH++ +C  P+G
Sbjct:   125 GARPATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 169

 Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 7/20 (35%), Positives = 8/20 (40%)

Query:    75 CNLCNIAGHVARQCPKGDSL 94
             C  C   GH A  C   + L
Sbjct:     9 CYKCGNVGHYAEVCSSAERL 28


>UNIPROTKB|F1NI84 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0005783
            GO:GO:0005829 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
            GO:GO:0008270 GO:GO:0045944 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AADN02013931
            IPI:IPI00819060 Ensembl:ENSGALT00000008010 ArrayExpress:F1NI84
            Uniprot:F1NI84
        Length = 105

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 35/91 (38%), Positives = 51/91 (56%)

Query:     1 MASNCH-NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--TNDKACK 57
             +A +C   E  C++CG+ GH A+DC    +     + C NC KPGH+A DC   +++ C 
Sbjct:    18 LAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCY 75

Query:    58 NCRKTGHIARDCQNEPVCNLCNIAGHVARQC 88
             +C + GHI +DC  +  C  C   GHVA  C
Sbjct:    76 SCGEFGHIQKDC-TKVKCYRCGETGHVAINC 105

 Score = 180 (68.4 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
 Identities = 36/88 (40%), Positives = 46/88 (52%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CG++GH A+DC     +      C NC + GHIA DC   K      C NC K GH
Sbjct:     8 ICYRCGESGHLAKDCDLQEDA------CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGH 61

Query:    65 IARDCQN--EPVCNLCNIAGHVARQCPK 90
             +ARDC +  E  C  C   GH+ + C K
Sbjct:    62 LARDCDHADEQKCYSCGEFGHIQKDCTK 89

 Score = 137 (53.3 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 26/63 (41%), Positives = 34/63 (53%)

Query:    36 LCNNCYKPGHIAADCT-NDKACKNCRKTGHIARDC-----QNEPVCNLCNIAGHVARQCP 89
             +C  C + GH+A DC   + AC NC + GHIA+DC     + E  C  C   GH+AR C 
Sbjct:     8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCD 67

Query:    90 KGD 92
               D
Sbjct:    68 HAD 70

 Score = 91 (37.1 bits), Expect = 0.00017, P = 0.00017
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH+++DC      C NCG  GH+A +C
Sbjct:     8 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDC 42

 Score = 87 (35.7 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:    74 CYSCGEFGHIQKDCTK--VKCYRCGETGHVAINC 105

 Score = 40 (19.1 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query:   126 VICRSCNQMGHMSRDC 141
             V C  C + GH++ +C
Sbjct:    90 VKCYRCGETGHVAINC 105


>DICTYBASE|DDB_G0293328 [details] [associations]
            symbol:DDB_G0293328 "Cellular nucleic acid-binding
            protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0293328
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AAFI02000201
            RefSeq:XP_629203.1 ProteinModelPortal:Q54BY8 STRING:Q54BY8
            EnsemblProtists:DDB0191881 GeneID:8629162 KEGG:ddi:DDB_G0293328
            InParanoid:Q54BY8 OMA:CKEVGHI ProtClustDB:PTZ00368 Uniprot:Q54BY8
        Length = 131

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 32/97 (32%), Positives = 44/97 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR---LCNNCYKPGHIAADCTN--DKACKNCRKTGHI 65
             C+ C   GH +R+C  + Q   + +    C  C   GH A DC    D  C NC   GHI
Sbjct:    33 CYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGFGHFARDCRRGRDNKCYNCGGLGHI 92

Query:    66 ARDCQNEPV---------CNLCNIAGHVARQCPKGDS 93
             ++DC +            C  CN  GH+A+ CP+  S
Sbjct:    93 SKDCPSPSTRGQGRDAAKCYKCNQPGHIAKACPENQS 129

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 30/94 (31%), Positives = 46/94 (48%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC------TNDKA----CK 57
             E  C+ C + GH +R+C  + ++G   R C  C   GH++ +C      T +K     C 
Sbjct:     6 EKSCYKCKEVGHISRNCPKNPEAGD--RACYVCNVVGHLSRECPQNPQPTFEKKDPIKCY 63

Query:    58 NCRKTGHIARDCQN--EPVCNLCNIAGHVARQCP 89
              C   GH ARDC+   +  C  C   GH+++ CP
Sbjct:    64 QCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCP 97

 Score = 116 (45.9 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
 Identities = 17/43 (39%), Positives = 29/43 (67%)

Query:    53 DKACKNCRKTGHIARDCQNEP-----VCNLCNIAGHVARQCPK 90
             +K+C  C++ GHI+R+C   P      C +CN+ GH++R+CP+
Sbjct:     6 EKSCYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQ 48

 Score = 113 (44.8 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
 Identities = 26/70 (37%), Positives = 36/70 (51%)

Query:    37 CNNCYKPGHIAADC-----TNDKACKNCRKTGHIARDC-QN--------EPV-CNLCNIA 81
             C  C + GHI+ +C       D+AC  C   GH++R+C QN        +P+ C  CN  
Sbjct:     9 CYKCKEVGHISRNCPKNPEAGDRACYVCNVVGHLSRECPQNPQPTFEKKDPIKCYQCNGF 68

Query:    82 GHVARQCPKG 91
             GH AR C +G
Sbjct:    69 GHFARDCRRG 78

 Score = 106 (42.4 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
 Identities = 20/44 (45%), Positives = 25/44 (56%)

Query:   128 CRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYECPSGRIADRG 170
             C  CN  GH +RDC  G    C NCGG GH++ +CPS     +G
Sbjct:    62 CYQCNGFGHFARDCRRGRDNKCYNCGGLGHISKDCPSPSTRGQG 105

 Score = 75 (31.5 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query:   128 CRSCNQMGHMSRDCVGP--------LIICRNCGGRGHMAYECPSGR 165
             C +C  +GH+S+DC  P           C  C   GH+A  CP  +
Sbjct:    83 CYNCGGLGHISKDCPSPSTRGQGRDAAKCYKCNQPGHIAKACPENQ 128


>FB|FBgn0034802 [details] [associations]
            symbol:CG3800 species:7227 "Drosophila melanogaster"
            [GO:0003676 "nucleic acid binding" evidence=ISS;NAS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K09250
            GeneTree:ENSGT00510000047065 OMA:QCYNCGE EMBL:AY075371
            EMBL:AY118596 RefSeq:NP_001188992.1 RefSeq:NP_611739.1
            UniGene:Dm.5513 ProteinModelPortal:Q8T8R1 SMR:Q8T8R1
            MINT:MINT-943666 STRING:Q8T8R1 PaxDb:Q8T8R1 PRIDE:Q8T8R1
            EnsemblMetazoa:FBtr0071994 EnsemblMetazoa:FBtr0303464 GeneID:37646
            KEGG:dme:Dmel_CG3800 UCSC:CG3800-RA FlyBase:FBgn0034802
            InParanoid:Q8T8R1 OrthoDB:EOG40RXZ0 PhylomeDB:Q8T8R1
            GenomeRNAi:37646 NextBio:804714 Bgee:Q8T8R1 Uniprot:Q8T8R1
        Length = 165

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 34/94 (36%), Positives = 45/94 (47%)

Query:     7 NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--NDKACKNCRKTGH 64
             N   C+ C + GH AR C    +       C  C   GHI+ DCT  ++  C  C KTGH
Sbjct:    53 NREKCYKCNQFGHFARACPEEAER------CYRCNGIGHISKDCTQADNPTCYRCNKTGH 106

Query:    65 IARDCQ---NE--PV---CNLCNIAGHVARQCPK 90
               R+C    NE  P    C  CN  GH+++ CP+
Sbjct:   107 WVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPE 140

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 24/64 (37%), Positives = 34/64 (53%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRL-CNNCYKPGHIAADCTN-DKACKNCRKTGHIARD 68
             C+ C KTGH  R+C   V   G   + C  C + GHI+ +C    K C  C K+GH+ R+
Sbjct:    98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRRE 157

Query:    69 CQNE 72
             C  +
Sbjct:   158 CDEK 161

 Score = 123 (48.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
 Identities = 25/67 (37%), Positives = 33/67 (49%)

Query:    31 GGDLRL----CNNCYKPGHIAADCTND-KACKNCRKTGHIARDCQ--NEPVCNLCNIAGH 83
             GG +R     C  C + GH A  C  + + C  C   GHI++DC   + P C  CN  GH
Sbjct:    47 GGGMRRNREKCYKCNQFGHFARACPEEAERCYRCNGIGHISKDCTQADNPTCYRCNKTGH 106

Query:    84 VARQCPK 90
               R CP+
Sbjct:   107 WVRNCPE 113

 Score = 114 (45.2 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
 Identities = 29/89 (32%), Positives = 39/89 (43%)

Query:    11 CHSCGKTGHRARDCSTHVQSG-GDLRLCNNCYKPGHIAADC----TNDKACKNCRKTGHI 65
             C+ C + GH ARDCS     G G +         G    D      N + C  C + GH 
Sbjct:     7 CYKCNRPGHFARDCSLGGGGGPGGVGGGGGGGGGGMRGNDGGGMRRNREKCYKCNQFGHF 66

Query:    66 ARDCQNEPV-CNLCNIAGHVARQCPKGDS 93
             AR C  E   C  CN  GH+++ C + D+
Sbjct:    67 ARACPEEAERCYRCNGIGHISKDCTQADN 95

 Score = 92 (37.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query:   122 GYHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             G  +V C  CN+ GH+S++C      C  CG  GH+  EC
Sbjct:   119 GPTNVSCYKCNRTGHISKNCPETSKTCYGCGKSGHLRREC 158

 Score = 73 (30.8 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query:   128 CRSCNQMGHMSRDCV------GPL-IICRNCGGRGHMAYECP 162
             C  CN+ GH  R+C       GP  + C  C   GH++  CP
Sbjct:    98 CYRCNKTGHWVRNCPEAVNERGPTNVSCYKCNRTGHISKNCP 139


>ASPGD|ASPL0000040986 [details] [associations]
            symbol:AN9093 species:162425 "Emericella nidulans"
            [GO:0045727 "positive regulation of translation" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003729
            "mRNA binding" evidence=IEA] [GO:0045182 "translation regulator
            activity" evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
            evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
            [GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 EMBL:BN001306 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 HOGENOM:HOG000186262 EnsemblFungi:CADANIAT00009521
            OMA:QAGHISR Uniprot:C8VH53
        Length = 233

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 52/168 (30%), Positives = 68/168 (40%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC-----TNDKACKNCRKTGHI 65
             C+ CG  GH A  CS+        RLC NC +PGH ++ C     T  K C NC+  GH+
Sbjct:     8 CYKCGNIGHYAEVCSSSE------RLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHV 61

Query:    66 ARDCQNEPV------CNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXX 119
               DC    +      C  C+  GH+AR CP   S                          
Sbjct:    62 QADCPTLRLNGANGRCYNCSQPGHLARNCPAPAS------GAPRGTGAPRGGFGGGFRGG 115

Query:   120 YVGY-HDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--PSG 164
             Y GY     C  C    H +RDC    + C  CG  GH++ +C  P+G
Sbjct:   116 YGGYPRAATCYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNG 163

 Score = 122 (48.0 bits), Expect = 1.7e-07, P = 1.7e-07
 Identities = 28/70 (40%), Positives = 32/70 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--ND-------KACKNCRK 61
             C+ CG   H ARDC            C  C K GHI+ DCT  N        K C  C +
Sbjct:   125 CYKCGGPNHFARDCQAQAMK------CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQ 178

Query:    62 TGHIARDCQN 71
              GHI+RDC N
Sbjct:   179 AGHISRDCPN 188

 Score = 121 (47.7 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 26/67 (38%), Positives = 32/67 (47%)

Query:    37 CNNCYKPGHIAADC-TNDKACKNCRKTGHIARDC---QNEP------VCNLCNIAGHVAR 86
             C  C  P H A DC      C  C K GHI+RDC      P      VC  C+ AGH++R
Sbjct:   125 CYKCGGPNHFARDCQAQAMKCYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISR 184

Query:    87 QCPKGDS 93
              CP  ++
Sbjct:   185 DCPNNEA 191

 Score = 119 (46.9 bits), Expect = 3.9e-07, P = 3.9e-07
 Identities = 23/59 (38%), Positives = 37/59 (62%)

Query:     2 ASNCHNEGI-CHSCGKTGHRARDCSTHVQSGGDL----RLCNNCYKPGHIAADCTNDKA 55
             A +C  + + C++CGK GH +RDC+    +GG L    ++C  C + GHI+ DC N++A
Sbjct:   135 ARDCQAQAMKCYACGKLGHISRDCTA--PNGGPLSSAGKVCYKCSQAGHISRDCPNNEA 191

 Score = 116 (45.9 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query:     7 NEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN------DKACKNCR 60
             +E +C++C + GH +  C     +  + + C NC   GH+ ADC        +  C NC 
Sbjct:    24 SERLCYNCKQPGHESSSCPRPRTT--ETKQCYNCQGLGHVQADCPTLRLNGANGRCYNCS 81

Query:    61 KTGHIARDC 69
             + GH+AR+C
Sbjct:    82 QPGHLARNC 90

 Score = 107 (42.7 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
 Identities = 27/94 (28%), Positives = 39/94 (41%)

Query:     9 GICHSCGKTGHRARDCSTHVQ-----SGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 63
             G C++C + GH AR+C          +G         ++ G+          C  C    
Sbjct:    75 GRCYNCSQPGHLARNCPAPASGAPRGTGAPRGGFGGGFRGGY--GGYPRAATCYKCGGPN 132

Query:    64 HIARDCQNEPV-CNLCNIAGHVARQC--PKGDSL 94
             H ARDCQ + + C  C   GH++R C  P G  L
Sbjct:   133 HFARDCQAQAMKCYACGKLGHISRDCTAPNGGPL 166

 Score = 95 (38.5 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
 Identities = 20/61 (32%), Positives = 27/61 (44%)

Query:    35 RLCNNCYKPGHIAADCTN-DKACKNCRKTGHIARDCQNEPV-----CNLCNIAGHVARQC 88
             R C  C   GH A  C++ ++ C NC++ GH +  C          C  C   GHV   C
Sbjct:     6 RACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPRPRTTETKQCYNCQGLGHVQADC 65

Query:    89 P 89
             P
Sbjct:    66 P 66

 Score = 93 (37.8 bits), Expect = 6.7e-15, Sum P(2) = 6.7e-15
 Identities = 17/44 (38%), Positives = 26/44 (59%)

Query:   128 CRSCNQMGHMSRDCV----GPLI----ICRNCGGRGHMAYECPS 163
             C +C ++GH+SRDC     GPL     +C  C   GH++ +CP+
Sbjct:   145 CYACGKLGHISRDCTAPNGGPLSSAGKVCYKCSQAGHISRDCPN 188

 Score = 77 (32.2 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query:    54 KACKNCRKTGHIARDCQN-EPVCNLCNIAGHVARQCPK 90
             +AC  C   GH A  C + E +C  C   GH +  CP+
Sbjct:     6 RACYKCGNIGHYAEVCSSSERLCYNCKQPGHESSSCPR 43

 Score = 63 (27.2 bits), Expect = 8.6e-12, Sum P(2) = 8.6e-12
 Identities = 9/15 (60%), Positives = 12/15 (80%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C  C+Q GH+SRDC
Sbjct:   172 VCYKCSQAGHISRDC 186


>UNIPROTKB|J9NRQ2 [details] [associations]
            symbol:ZCCHC13 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000047065 EMBL:AAEX03026520
            Ensembl:ENSCAFT00000049751 OMA:EEQKCYS Uniprot:J9NRQ2
        Length = 146

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 36/92 (39%), Positives = 51/92 (55%)

Query:     2 ASNCHN-EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTN--DKACKN 58
             A NC   E IC++CG++GH A+DC    +     + C  C +PGH+A DC    ++ C +
Sbjct:    58 AKNCDLLEDICYNCGRSGHIAKDCIEPKRERE--QCCYTCGRPGHLARDCDRQEEQKCYS 115

Query:    59 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C + GHI +DC  +  C  C   GHVA  C K
Sbjct:   116 CGEYGHIQKDC-TQVKCYRCGETGHVAINCSK 146

 Score = 172 (65.6 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 34/86 (39%), Positives = 46/86 (53%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK-----ACKNCRKTGH 64
             IC+ CGK+GH A++C   ++      +C NC + GHIA DC   K      C  C + GH
Sbjct:    47 ICYRCGKSGHHAKNCDL-LED-----ICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGH 100

Query:    65 IARDC--QNEPVCNLCNIAGHVARQC 88
             +ARDC  Q E  C  C   GH+ + C
Sbjct:   101 LARDCDRQEEQKCYSCGEYGHIQKDC 126

 Score = 112 (44.5 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 27/83 (32%), Positives = 38/83 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C  CG++GH AR C    + GG           G   +       C  C K+GH A++C 
Sbjct:     6 CFRCGRSGHWARGCP---RVGGSRGRGARGRGRGSPCSSTNLPDICYRCGKSGHHAKNCD 62

Query:    71 N-EPVCNLCNIAGHVARQC--PK 90
               E +C  C  +GH+A+ C  PK
Sbjct:    63 LLEDICYNCGRSGHIAKDCIEPK 85

 Score = 88 (36.0 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query:   127 ICRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYEC 161
             IC +C + GH+++DC+ P       C  CG  GH+A +C
Sbjct:    67 ICYNCGRSGHIAKDCIEPKREREQCCYTCGRPGHLARDC 105

 Score = 86 (35.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C SC + GH+ +DC    + C  CG  GH+A  C
Sbjct:   113 CYSCGEYGHIQKDCTQ--VKCYRCGETGHVAINC 144

 Score = 85 (35.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
 Identities = 15/35 (42%), Positives = 21/35 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             IC  C + GH +++C     IC NCG  GH+A +C
Sbjct:    47 ICYRCGKSGHHAKNCDLLEDICYNCGRSGHIAKDC 81

 Score = 49 (22.3 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 8/18 (44%), Positives = 11/18 (61%)

Query:    52 NDKACKNCRKTGHIARDC 69
             + K C  C ++GH AR C
Sbjct:     2 SSKECFRCGRSGHWARGC 19

 Score = 40 (19.1 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query:   126 VICRSCNQMGHMSRDC 141
             V C  C + GH++ +C
Sbjct:   129 VKCYRCGETGHVAINC 144


>TAIR|locus:2135139 [details] [associations]
            symbol:CSDP1 "cold shock domain protein 1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009409 "response
            to cold" evidence=IGI;IEP] [GO:0003690 "double-stranded DNA
            binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
            evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0009414
            "response to water deprivation" evidence=IEP] [GO:0009651 "response
            to salt stress" evidence=IEP] [GO:0010501 "RNA secondary structure
            unwinding" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
            evidence=IDA] [GO:0009631 "cold acclimation" evidence=IGI]
            [GO:0009165 "nucleotide biosynthetic process" evidence=RCA]
            InterPro:IPR001878 InterPro:IPR002059 InterPro:IPR011129
            Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050 PROSITE:PS50158
            SMART:SM00343 SMART:SM00357 Prosite:PS00352 GO:GO:0005634
            GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
            GO:GO:0046872 GO:GO:0009651 GO:GO:0009414 GO:GO:0008270
            GO:GO:0009631 GO:GO:0003723 EMBL:AL161588 GO:GO:0003690
            GO:GO:0003697 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AL022373
            HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 GO:GO:0010501
            EMBL:AK226815 IPI:IPI00525206 PIR:T05494 RefSeq:NP_195326.1
            UniGene:At.23073 HSSP:P15277 ProteinModelPortal:O65639 SMR:O65639
            STRING:O65639 PaxDb:O65639 PRIDE:O65639 EnsemblPlants:AT4G36020.1
            GeneID:829758 KEGG:ath:AT4G36020 TAIR:At4g36020 eggNOG:COG1278
            InParanoid:O65639 OMA:GRACYNC PhylomeDB:O65639
            ProtClustDB:CLSN2685328 Genevestigator:O65639 GO:GO:0032508
            Uniprot:O65639
        Length = 299

 Score = 168 (64.2 bits), Expect = 2.5e-12, P = 2.5e-12
 Identities = 38/100 (38%), Positives = 49/100 (49%)

Query:     7 NEGICHSCGKTGHRARDCSTHVQSG------GDLRLCNNCYKPGHIAADCTN----DKAC 56
             N+G C++CG  GH ARDC+  V +G      G    C +C   GHIA DC       + C
Sbjct:   197 NDG-CYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGC 255

Query:    57 KNCRKTGHIARDCQ--------NEPVCNLCNIAGHVARQC 88
               C  +GH+ARDC         N+  C  C   GH AR+C
Sbjct:   256 YQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFAREC 295

 Score = 151 (58.2 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 32/71 (45%), Positives = 37/71 (52%)

Query:     9 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--------NDKACKNCR 60
             G C+SCG  GH ARDC+T  Q     R C  C   GH+A DC         ND AC  C 
Sbjct:   230 GTCYSCGGVGHIARDCATKRQPS---RGCYQCGGSGHLARDCDQRGSGGGGNDNACYKCG 286

Query:    61 KTGHIARDCQN 71
             K GH AR+C +
Sbjct:   287 KEGHFARECSS 297

 Score = 131 (51.2 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
 Identities = 33/90 (36%), Positives = 40/90 (44%)

Query:     7 NEGICHSCGKTGHRARDCSTHVQSGGDLRL--------CNNCYKPGHIAADCTNDKACKN 58
             N+G C++CG  GH ARDC+      GD R         C  C   GH A DCT   A  N
Sbjct:   163 NDG-CYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGN 221

Query:    59 CRKTGHIARDCQNEPVCNLCNIAGHVARQC 88
              R  G  +  C +      C   GH+AR C
Sbjct:   222 VRSGGGGSGTCYS------CGGVGHIARDC 245

 Score = 123 (48.4 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
 Identities = 34/89 (38%), Positives = 43/89 (48%)

Query:     8 EGICHSCGKTGHRARDCSTHVQSGGDLRL--------CNNCYKPGHIAADCTNDKACKNC 59
             EG C++CG TGH ARDC++     GD R         C  C   GH+A DCT  K+  N 
Sbjct:   132 EG-CYNCGDTGHFARDCTS--AGNGDQRGATKGGNDGCYTCGDVGHVARDCTQ-KSVGNG 187

Query:    60 RKTGHIARDCQNEPVCNLCNIAGHVARQC 88
              + G +     N+  C  C   GH AR C
Sbjct:   188 DQRGAVKGG--NDG-CYTCGDVGHFARDC 213

 Score = 118 (46.6 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
 Identities = 31/84 (36%), Positives = 39/84 (46%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRL------CNNCYKPGHIAADCTNDKACKNCRKTGH 64
             C++CG+ GH ++DC      GG  R       C NC   GH A DCT+     N  + G 
Sbjct:   102 CYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTS---AGNGDQRG- 157

Query:    65 IARDCQNEPVCNLCNIAGHVARQC 88
              A    N+  C  C   GHVAR C
Sbjct:   158 -ATKGGNDG-CYTCGDVGHVARDC 179

 Score = 94 (38.1 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query:   128 CRSCNQMGHMSRDCVG---PLIICRNCGGRGHMAYEC 161
             C SC  +GH++RDC     P   C  CGG GH+A +C
Sbjct:   232 CYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDC 268

 Score = 83 (34.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
 Identities = 19/55 (34%), Positives = 26/55 (47%)

Query:   128 CRSCNQMGHMSRDCV------------GPLIICRNCGGRGHMAYECPSGRIADRG 170
             C +C  +GH +RDC             G    C +CGG GH+A +C + R   RG
Sbjct:   200 CYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRG 254

 Score = 80 (33.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
 Identities = 20/52 (38%), Positives = 23/52 (44%)

Query:    31 GGDLRLCNNCYKPGHIAADC-------------TNDKACKNCRKTGHIARDC 69
             GG    C NC + GHI+ DC                + C NC  TGH ARDC
Sbjct:    96 GGGGSGCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDC 147

 Score = 75 (31.5 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
 Identities = 17/43 (39%), Positives = 19/43 (44%)

Query:   128 CRSCNQMGHMSRDCV-------GPLIICRNCGGRGHMAYECPS 163
             C  C   GH++RDC        G    C  CG  GH A EC S
Sbjct:   255 CYQCGGSGHLARDCDQRGSGGGGNDNACYKCGKEGHFARECSS 297

 Score = 52 (23.4 bits), Expect = 8.4e-12, Sum P(2) = 8.4e-12
 Identities = 8/20 (40%), Positives = 12/20 (60%)

Query:   122 GYHDVICRSCNQMGHMSRDC 141
             G +D  C  C + GH +R+C
Sbjct:   276 GGNDNACYKCGKEGHFAREC 295

 Score = 39 (18.8 bits), Expect = 0.00082, Sum P(2) = 0.00082
 Identities = 6/17 (35%), Positives = 9/17 (52%)

Query:    75 CNLCNIAGHVARQCPKG 91
             C  C   GH+++ C  G
Sbjct:   102 CYNCGELGHISKDCGIG 118


>WB|WBGene00001601 [details] [associations]
            symbol:glh-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0007276 "gamete generation"
            evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0008432 "JUN kinase binding" evidence=IPI]
            InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003723 GO:GO:0042127 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0007276
            GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
            PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:AF079508 EMBL:FO081191 PIR:T32759 PIR:T43326
            RefSeq:NP_491207.3 ProteinModelPortal:O76743 SMR:O76743
            IntAct:O76743 STRING:O76743 PaxDb:O76743 PRIDE:O76743
            EnsemblMetazoa:T12F5.3.1 EnsemblMetazoa:T12F5.3.2 GeneID:171941
            KEGG:cel:CELE_T12F5.3 UCSC:T12F5.3.1 CTD:171941 WormBase:T12F5.3
            InParanoid:O76743 NextBio:873335 Uniprot:O76743
        Length = 1156

 Score = 158 (60.7 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 35/90 (38%), Positives = 41/90 (45%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIA 66
             C +C + GH A DC       G    C NC   GH A DC   K     C+NC + GH A
Sbjct:   595 CRNCEQLGHFASDCDQPRVPRGP---CRNCGIEGHFAVDCDQPKVPRGPCRNCGQEGHFA 651

Query:    67 RDCQNEPV-------CNLCNIAGHVARQCP 89
             +DCQNE V       C  C   GH   +CP
Sbjct:   652 KDCQNERVRMEPTEPCRRCAEEGHWGYECP 681

 Score = 146 (56.5 bits), Expect = 7.2e-09, P = 7.2e-09
 Identities = 30/86 (34%), Positives = 40/86 (46%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIA 66
             CH+CG+ GH +++C            C NC + GH A+DC   +     C+NC   GH A
Sbjct:   572 CHNCGEEGHISKECDKPKVPRFP---CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFA 628

Query:    67 RDCQNEPV----CNLCNIAGHVARQC 88
              DC    V    C  C   GH A+ C
Sbjct:   629 VDCDQPKVPRGPCRNCGQEGHFAKDC 654

 Score = 129 (50.5 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
 Identities = 29/71 (40%), Positives = 36/71 (50%)

Query:    31 GGDL-RLCNNCYKPGHIAADCTNDKA----CKNCRKTGHIARDCQNEPV----CNLCNIA 81
             GG+  R C+NC + GHI+ +C   K     C+NC + GH A DC    V    C  C I 
Sbjct:   565 GGERPRGCHNCGEEGHISKECDKPKVPRFPCRNCEQLGHFASDCDQPRVPRGPCRNCGIE 624

Query:    82 GHVARQC--PK 90
             GH A  C  PK
Sbjct:   625 GHFAVDCDQPK 635

 Score = 121 (47.7 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 28/83 (33%), Positives = 36/83 (43%)

Query:     2 ASNCHN----EGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-- 55
             AS+C       G C +CG  GH A DC       G    C NC + GH A DC N++   
Sbjct:   605 ASDCDQPRVPRGPCRNCGIEGHFAVDCDQPKVPRGP---CRNCGQEGHFAKDCQNERVRM 661

Query:    56 -----CKNCRKTGHIARDCQNEP 73
                  C+ C + GH   +C   P
Sbjct:   662 EPTEPCRRCAEEGHWGYECPTRP 684

 Score = 109 (43.4 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 20/46 (43%), Positives = 27/46 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLII---CRNCGGRGHMAYECPSGRIADRG 170
             CR+C Q+GH + DC  P +    CRNCG  GH A +C   ++  RG
Sbjct:   595 CRNCEQLGHFASDCDQPRVPRGPCRNCGIEGHFAVDCDQPKVP-RG 639

 Score = 102 (41.0 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:   128 CRSCNQMGHMSRDC------VGPLIICRNCGGRGHMAYECPS 163
             CR+C Q GH ++DC      + P   CR C   GH  YECP+
Sbjct:   641 CRNCGQEGHFAKDCQNERVRMEPTEPCRRCAEEGHWGYECPT 682


>UNIPROTKB|Q8WW36 [details] [associations]
            symbol:ZCCHC13 "Zinc finger CCHC domain-containing protein
            13" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 HOGENOM:HOG000186262
            HOVERGEN:HBG000397 EMBL:BC021176 IPI:IPI00397484 RefSeq:NP_976048.1
            UniGene:Hs.157231 ProteinModelPortal:Q8WW36 SMR:Q8WW36
            IntAct:Q8WW36 MINT:MINT-2879587 PhosphoSite:Q8WW36 DMDM:71152962
            PRIDE:Q8WW36 DNASU:389874 Ensembl:ENST00000339534 GeneID:389874
            KEGG:hsa:389874 UCSC:uc004ebs.4 CTD:389874 GeneCards:GC0XP073524
            HGNC:HGNC:31749 HPA:HPA003382 neXtProt:NX_Q8WW36
            PharmGKB:PA134926925 InParanoid:Q8WW36 OMA:SSKECFK PhylomeDB:Q8WW36
            GenomeRNAi:389874 NextBio:103180 Bgee:Q8WW36 CleanEx:HS_ZCCHC13
            Genevestigator:Q8WW36 GermOnline:ENSG00000187969 Uniprot:Q8WW36
        Length = 166

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 37/92 (40%), Positives = 49/92 (53%)

Query:     2 ASNCHNEG-ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA--CKN 58
             A NC   G IC++CG++GH A+DC    +     + C  C + GH+A DC   K   C +
Sbjct:    57 AKNCVLLGNICYNCGRSGHIAKDCKDPKRERR--QHCYTCGRLGHLARDCDRQKEQKCYS 114

Query:    59 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C K GHI +DC  +  C  C   GHVA  C K
Sbjct:   115 CGKLGHIQKDCA-QVKCYRCGEIGHVAINCSK 145

 Score = 161 (61.7 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
 Identities = 33/85 (38%), Positives = 45/85 (52%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKA-----CKNCRKTGHI 65
             C+ CG++G  A++C   V  G    +C NC + GHIA DC + K      C  C + GH+
Sbjct:    47 CYCCGESGRNAKNC---VLLGN---ICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHL 100

Query:    66 ARDC--QNEPVCNLCNIAGHVARQC 88
             ARDC  Q E  C  C   GH+ + C
Sbjct:   101 ARDCDRQKEQKCYSCGKLGHIQKDC 125

 Score = 90 (36.7 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPSGR 165
             C SC ++GH+ +DC    + C  CG  GH+A  C   R
Sbjct:   112 CYSCGKLGHIQKDCAQ--VKCYRCGEIGHVAINCSKAR 147

 Score = 85 (35.0 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
 Identities = 24/75 (32%), Positives = 33/75 (44%)

Query:    13 SCGKTGHRARDCSTHVQSG------------GDLRLCNNCY---KPGHIAADCTN-DKAC 56
             +CG +GH AR C      G            G   L   CY   + G  A +C      C
Sbjct:     8 ACGHSGHWARGCPRGGAGGRRGGGHGRGSQCGSTTLSYTCYCCGESGRNAKNCVLLGNIC 67

Query:    57 KNCRKTGHIARDCQN 71
              NC ++GHIA+DC++
Sbjct:    68 YNCGRSGHIAKDCKD 82

 Score = 82 (33.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query:   127 ICRSCNQMGHMSRDCVGPLII----CRNCGGRGHMAYEC 161
             IC +C + GH+++DC  P       C  CG  GH+A +C
Sbjct:    66 ICYNCGRSGHIAKDCKDPKRERRQHCYTCGRLGHLARDC 104

 Score = 80 (33.2 bits), Expect = 0.00088, Sum P(2) = 0.00087
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC 161
             C  C + G  +++CV    IC NCG  GH+A +C
Sbjct:    47 CYCCGESGRNAKNCVLLGNICYNCGRSGHIAKDC 80

 Score = 49 (22.3 bits), Expect = 0.00043, Sum P(2) = 0.00043
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query:    78 CNIAGHVARQCPKG 91
             C  +GH AR CP+G
Sbjct:     9 CGHSGHWARGCPRG 22

 Score = 42 (19.8 bits), Expect = 5.7e-15, Sum P(2) = 5.7e-15
 Identities = 6/16 (37%), Positives = 11/16 (68%)

Query:   126 VICRSCNQMGHMSRDC 141
             V C  C ++GH++ +C
Sbjct:   128 VKCYRCGEIGHVAINC 143


>ASPGD|ASPL0000028407 [details] [associations]
            symbol:AN5111 species:162425 "Emericella nidulans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0000747 "conjugation with
            cellular fusion" evidence=IEA] [GO:0031137 "regulation of
            conjugation with cellular fusion" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 EMBL:BN001305 Gene3D:4.10.60.10
            SUPFAM:SSF57756 OMA:FQFMSSS EnsemblFungi:CADANIAT00003095
            Uniprot:C8VEX3
        Length = 171

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 36/91 (39%), Positives = 48/91 (52%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDL--------RLCNNCYKPGHIAADCTNDKACKNCRKT 62
             C+ CG+ GH AR+CS     GG          + C +C   GH+A DCT  + C NC +T
Sbjct:    79 CYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQTCYSCGGFGHMARDCTQGQKCYNCGET 138

Query:    63 GHIARDC----QNEPVCNLCNIAGHVARQCP 89
             GH++RDC    + E VC  C   GH+   CP
Sbjct:   139 GHVSRDCPTEAKGERVCYQCKQPGHIQSACP 169

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 48/164 (29%), Positives = 67/164 (40%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT---NDKACKNCRKTGHIA 66
             +C +CG+  H+ARDC    + G     C NC   GH++ +CT    +K+C  C   GHI+
Sbjct:     7 VCFNCGEATHQARDCP---KKGTPT--CYNCGGQGHVSRECTVAPKEKSCYRCGAVGHIS 61

Query:    67 RDCQNEPVCNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVGYHDV 126
             R+C           AG   R     +                           Y G    
Sbjct:    62 RECPQ---------AGENERPAGGQECYKCGRVGHIARNCSQGGSYGGGFGGGYGGRQQT 112

Query:   127 ICRSCNQMGHMSRDCV-GPLIICRNCGGRGHMAYECPSGRIADR 169
              C SC   GHM+RDC  G    C NCG  GH++ +CP+    +R
Sbjct:   113 -CYSCGGFGHMARDCTQGQK--CYNCGETGHVSRDCPTEAKGER 153

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 26/65 (40%), Positives = 34/65 (52%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND----KACKNCRKTGHIA 66
             C+SCG  GH ARDC T  Q       C NC + GH++ DC  +    + C  C++ GHI 
Sbjct:   113 CYSCGGFGHMARDC-TQGQK------CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQ 165

Query:    67 RDCQN 71
               C N
Sbjct:   166 SACPN 170

 Score = 126 (49.4 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
 Identities = 25/65 (38%), Positives = 34/65 (52%)

Query:    31 GGDLRLCNNCYKPGHIAADCTND--KACKNCRKTGHIARDCQ---NEPVCNLCNIAGHVA 85
             GG  R+C NC +  H A DC       C NC   GH++R+C     E  C  C   GH++
Sbjct:     4 GG--RVCFNCGEATHQARDCPKKGTPTCYNCGGQGHVSRECTVAPKEKSCYRCGAVGHIS 61

Query:    86 RQCPK 90
             R+CP+
Sbjct:    62 RECPQ 66

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 23/53 (43%), Positives = 34/53 (64%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND 53
             MA +C     C++CG+TGH +RDC T  +  G+ R+C  C +PGHI + C N+
Sbjct:   122 MARDCTQGQKCYNCGETGHVSRDCPTEAK--GE-RVCYQCKQPGHIQSACPNN 171

 Score = 105 (42.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
 Identities = 27/88 (30%), Positives = 40/88 (45%)

Query:     8 EGICHSCGKTGHRARDC----STHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 63
             E  C+ CG  GH +R+C         +GG  + C  C + GHIA +C+   +       G
Sbjct:    48 EKSCYRCGAVGHISRECPQAGENERPAGG--QECYKCGRVGHIARNCSQGGSYGGGFGGG 105

Query:    64 HIARDCQNEPVCNLCNIAGHVARQCPKG 91
             +  R    +  C  C   GH+AR C +G
Sbjct:   106 YGGR----QQTCYSCGGFGHMARDCTQG 129

 Score = 76 (31.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query:   128 CRSCNQMGHMSRDCVGPLI---ICRNCGGRGHMAYECPS 163
             C +C + GH+SRDC        +C  C   GH+   CP+
Sbjct:   132 CYNCGETGHVSRDCPTEAKGERVCYQCKQPGHIQSACPN 170

 Score = 43 (20.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 6/15 (40%), Positives = 8/15 (53%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C  C Q GH+   C
Sbjct:   154 VCYQCKQPGHIQSAC 168


>WB|WBGene00001599 [details] [associations]
            symbol:glh-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
            binding" evidence=IPI] [GO:0043621 "protein self-association"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 54
             C +C + GHR+ DC    +   + R+C NC +PGH + DC  ++
Sbjct:   259 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 301

 Score = 99 (39.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 54
             C +C + GHR+ DC    +   + R+C NC +PGH + DC  ++
Sbjct:   373 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 415

 Score = 96 (38.9 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH + DC   K       C NC++ GH +RDC  E
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414

 Score = 96 (38.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH + DC   K       C NC++ GH +RDC  E
Sbjct:   259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300

 Score = 92 (37.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C +C   GH S +C  P   C NCG +GH + ECP+
Sbjct:   455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490

 Score = 84 (34.6 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query:    56 CKNCRKTGHIARDC-----QNEP-VCNLCNIAGHVARQCPK 90
             C NC++ GH + DC     + EP VC  C   GH +R CP+
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413

 Score = 84 (34.6 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query:    56 CKNCRKTGHIARDC-----QNEP-VCNLCNIAGHVARQCPK 90
             C NC++ GH + DC     + EP VC  C   GH +R CP+
Sbjct:   259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299

 Score = 83 (34.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query:   128 CRSCNQMGHMSRDCVGPLI-----ICRNCGGRGHMAYECPSGR 165
             C +C Q GH S DC  P       +C NC   GH + +CP  R
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415

 Score = 59 (25.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C +C Q GH SRDC
Sbjct:   397 VCYNCQQPGHNSRDC 411

 Score = 57 (25.1 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query:    10 ICHSCGKTGHRARDC 24
             +C++C + GH +RDC
Sbjct:   283 VCYNCQQPGHNSRDC 297

 Score = 54 (24.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 162
             C +C + GH S +C  P        G G  A   P
Sbjct:   475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509


>UNIPROTKB|Q966L9 [details] [associations]
            symbol:glh-2 "ATP-dependent RNA helicase glh-2"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
            EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
            ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
            PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
            KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
            HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
            Uniprot:Q966L9
        Length = 974

 Score = 99 (39.9 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 54
             C +C + GHR+ DC    +   + R+C NC +PGH + DC  ++
Sbjct:   259 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 301

 Score = 99 (39.9 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
 Identities = 16/44 (36%), Positives = 26/44 (59%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDK 54
             C +C + GHR+ DC    +   + R+C NC +PGH + DC  ++
Sbjct:   373 CFNCQQPGHRSNDCP-EPKKEREPRVCYNCQQPGHNSRDCPEER 415

 Score = 96 (38.9 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH + DC   K       C NC++ GH +RDC  E
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 414

 Score = 96 (38.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH + DC   K       C NC++ GH +RDC  E
Sbjct:   259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEE 300

 Score = 92 (37.4 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C +C   GH S +C  P   C NCG +GH + ECP+
Sbjct:   455 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 490

 Score = 84 (34.6 bits), Expect = 3.4e-14, Sum P(3) = 3.4e-14
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query:    56 CKNCRKTGHIARDC-----QNEP-VCNLCNIAGHVARQCPK 90
             C NC++ GH + DC     + EP VC  C   GH +R CP+
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 413

 Score = 84 (34.6 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query:    56 CKNCRKTGHIARDC-----QNEP-VCNLCNIAGHVARQCPK 90
             C NC++ GH + DC     + EP VC  C   GH +R CP+
Sbjct:   259 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPE 299

 Score = 83 (34.3 bits), Expect = 7.9e-08, Sum P(2) = 7.9e-08
 Identities = 17/43 (39%), Positives = 21/43 (48%)

Query:   128 CRSCNQMGHMSRDCVGPLI-----ICRNCGGRGHMAYECPSGR 165
             C +C Q GH S DC  P       +C NC   GH + +CP  R
Sbjct:   373 CFNCQQPGHRSNDCPEPKKEREPRVCYNCQQPGHNSRDCPEER 415

 Score = 59 (25.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C +C Q GH SRDC
Sbjct:   397 VCYNCQQPGHNSRDC 411

 Score = 57 (25.1 bits), Expect = 7.9e-11, Sum P(3) = 7.9e-11
 Identities = 7/15 (46%), Positives = 12/15 (80%)

Query:    10 ICHSCGKTGHRARDC 24
             +C++C + GH +RDC
Sbjct:   283 VCYNCQQPGHNSRDC 297

 Score = 54 (24.1 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 162
             C +C + GH S +C  P        G G  A   P
Sbjct:   475 CFNCGEQGHRSNECPNPAKPREGAEGEGPKATYVP 509


>TAIR|locus:2827810 [details] [associations]
            symbol:CSP3 "cold shock domain protein 3" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009409 "response to cold"
            evidence=IEP;IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0009631
            "cold acclimation" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
            evidence=IDA] InterPro:IPR001878 InterPro:IPR002059
            InterPro:IPR011129 Pfam:PF00098 Pfam:PF00313 PRINTS:PR00050
            PROSITE:PS50158 SMART:SM00343 SMART:SM00357 Prosite:PS00352
            GO:GO:0005634 GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
            GO:GO:0009631 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
            SUPFAM:SSF50249 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 InterPro:IPR019844 eggNOG:COG1278
            ProtClustDB:CLSN2685328 GO:GO:0032508 HSSP:O54310 EMBL:AB308041
            EMBL:AY035133 EMBL:AY062985 IPI:IPI00519047 PIR:T00837
            RefSeq:NP_565427.1 UniGene:At.19464 ProteinModelPortal:Q94C69
            SMR:Q94C69 PaxDb:Q94C69 PRIDE:Q94C69 EnsemblPlants:AT2G17870.1
            GeneID:816297 KEGG:ath:AT2G17870 TAIR:At2g17870 InParanoid:Q94C69
            OMA:MEDQSAA PhylomeDB:Q94C69 Genevestigator:Q94C69 Uniprot:Q94C69
        Length = 301

 Score = 125 (49.1 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 29/70 (41%), Positives = 34/70 (48%)

Query:    11 CHSCGKTGHRARDCSTHVQS--GGDLRLCNNCYKPGHIAADCTND---------KACKNC 59
             C+ CG  GH ARDC  +     GG    C  C   GHIA  CT+          +AC  C
Sbjct:   198 CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYEC 257

Query:    60 RKTGHIARDC 69
               TGH+ARDC
Sbjct:   258 GGTGHLARDC 267

 Score = 122 (48.0 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
 Identities = 33/86 (38%), Positives = 39/86 (45%)

Query:     8 EGICHSCGKTGHRARDC--STHVQSGGDL---RLCNNCYKPGHIAADCTNDKACKNCRKT 62
             EG C+ CG  GH ARDC  S    SGG     R C +C + GH+A DC         R  
Sbjct:   129 EGECYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDCRGGSGGN--RYG 186

Query:    63 GHIARDCQNEPVCNLCNIAGHVARQC 88
             G   R    +  C +C   GH AR C
Sbjct:   187 GGGGRGSGGDG-CYMCGGVGHFARDC 211

 Score = 116 (45.9 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 26/72 (36%), Positives = 34/72 (47%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDL--RLCNNCYKPGHIAADCTN-----------DKACK 57
             C++CG  GH A+ C++ + SGG    R C  C   GH+A DC                C 
Sbjct:   226 CYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCF 285

Query:    58 NCRKTGHIARDC 69
              C K GH AR+C
Sbjct:   286 ICGKEGHFAREC 297

 Score = 105 (42.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
 Identities = 31/87 (35%), Positives = 37/87 (42%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC- 69
             C+SCG+ GH A+DC     SGG      N Y  G      +    C  C   GH ARDC 
Sbjct:   163 CYSCGEVGHLAKDCRGG--SGG------NRYGGG--GGRGSGGDGCYMCGGVGHFARDCR 212

Query:    70 QNE--------PVCNLCNIAGHVARQC 88
             QN           C  C   GH+A+ C
Sbjct:   213 QNGGGNVGGGGSTCYTCGGVGHIAKVC 239

 Score = 101 (40.6 bits), Expect = 0.00086, P = 0.00086
 Identities = 21/46 (45%), Positives = 24/46 (52%)

Query:    11 CHSCGKTGHRARDC----STHVQSGGDLRLCNNCYKPGHIAADCTN 52
             C+ CG TGH ARDC    S     GG    C  C K GH A +CT+
Sbjct:   254 CYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299

 Score = 92 (37.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 29/93 (31%), Positives = 35/93 (37%)

Query:     9 GICHSCGKTGHRARDCS-----THVQSGGDLRL-----CNNCYKPGHIAADCTNDKACKN 58
             G C +CG+ GH A+DC           GG  R      C  C   GH A DC       N
Sbjct:    94 GNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCGDVGHFARDCRQSGG-GN 152

Query:    59 CRKTGHIARDCQNEPVCNLCNIAGHVARQCPKG 91
                 G   R C +      C   GH+A+ C  G
Sbjct:   153 SGGGGGGGRPCYS------CGEVGHLAKDCRGG 179

 Score = 72 (30.4 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
 Identities = 17/44 (38%), Positives = 20/44 (45%)

Query:   128 CRSCNQMGHMSRDCV--------GPLIICRNCGGRGHMAYECPS 163
             C  C  +GH +RDC         G    C  CGG GH+A  C S
Sbjct:   198 CYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTS 241

 Score = 71 (30.1 bits), Expect = 9.6e-13, Sum P(2) = 9.6e-13
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query:   121 VGYHDVICRSCNQMGHMSRDCVGPLI--------ICRNCGGRGHMAYEC 161
             VG     C +C  +GH+++ C   +          C  CGG GH+A +C
Sbjct:   219 VGGGGSTCYTCGGVGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDC 267

 Score = 65 (27.9 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
 Identities = 17/46 (36%), Positives = 19/46 (41%)

Query:   128 CRSCNQMGHMSRDCV----------GPLIICRNCGGRGHMAYECPS 163
             C  C   GH++RDC           G    C  CG  GH A EC S
Sbjct:   254 CYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTS 299


>TAIR|locus:2079859 [details] [associations]
            symbol:AT3G43590 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL391734 EMBL:AY099824 EMBL:BT002203
            IPI:IPI00517919 RefSeq:NP_189945.1 UniGene:At.36254
            ProteinModelPortal:Q9FYD1 SMR:Q9FYD1 IntAct:Q9FYD1 PRIDE:Q9FYD1
            EnsemblPlants:AT3G43590.1 GeneID:823456 KEGG:ath:AT3G43590
            TAIR:At3g43590 HOGENOM:HOG000071063 InParanoid:Q9FYD1 OMA:RECPNSS
            PhylomeDB:Q9FYD1 ProtClustDB:CLSN2684404 ArrayExpress:Q9FYD1
            Genevestigator:Q9FYD1 Uniprot:Q9FYD1
        Length = 551

 Score = 116 (45.9 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
 Identities = 27/80 (33%), Positives = 38/80 (47%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C+SCG+ GH + +C T  +     + C  C    H A  C+    C  C+KTGH A+DC 
Sbjct:   168 CYSCGEQGHTSFNCPTPTKRR---KPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCP 224

Query:    71 NE-------PVCNLCNIAGH 83
             ++        VC  C   GH
Sbjct:   225 DKYKNGSKGAVCLRCGDFGH 244

 Score = 115 (45.5 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 26/96 (27%), Positives = 40/96 (41%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C+ CG+ GH    C  H +   +    N+   P  +  +      C  C + GH AR+C 
Sbjct:   287 CYRCGQLGHSGLACGRHYEESNE----NDSATPERLF-NSREASECYRCGEEGHFARECP 341

Query:    71 N------------EPVCNLCNIAGHVARQCPKGDSL 94
             N            + +C  CN +GH AR+CP    +
Sbjct:   342 NSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQV 377

 Score = 104 (41.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 31/103 (30%), Positives = 38/103 (36%)

Query:     2 ASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCT--------ND 53
             A  C     C+ C KTGHRA+DC    ++G    +C  C   GH    C          D
Sbjct:   201 AKQCSKGHDCYICKKTGHRAKDCPDKYKNGSKGAVCLRCGDFGHDMILCKYEYSKEDLKD 260

Query:    54 KACKNCRKTGHIARDCQNEP--------VCNLCNIAGHVARQC 88
               C  C+  GH+   C  EP         C  C   GH    C
Sbjct:   261 VQCYICKSFGHL---CCVEPGNSLSWAVSCYRCGQLGHSGLAC 300

 Score = 90 (36.7 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
 Identities = 18/57 (31%), Positives = 25/57 (43%)

Query:    37 CNNCYKPGHIAADCTND----KACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCP 89
             C +C + GH + +C       K C  C    H A+ C     C +C   GH A+ CP
Sbjct:   168 CYSCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCP 224

 Score = 76 (31.8 bits), Expect = 9.8e-12, Sum P(2) = 9.8e-12
 Identities = 18/54 (33%), Positives = 24/54 (44%)

Query:   128 CRSCNQMGHMSRDCVGPLII-----------CRNCGGRGHMAYECP-SGRIADR 169
             C  C + GH +R+C     I           C  C G GH A ECP S +++ R
Sbjct:   327 CYRCGEEGHFARECPNSSSISTSHGRESQTLCYRCNGSGHFARECPNSSQVSKR 380

 Score = 62 (26.9 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
 Identities = 15/43 (34%), Positives = 17/43 (39%)

Query:   125 DVICRSCNQMGHMSRDCVGP------LIICRNCGGRGHMAYEC 161
             DV C  C   GH+   CV P       + C  CG  GH    C
Sbjct:   260 DVQCYICKSFGHLC--CVEPGNSLSWAVSCYRCGQLGHSGLAC 300

 Score = 51 (23.0 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C  CN  GH +R+C
Sbjct:   357 LCYRCNGSGHFAREC 371


>ZFIN|ZDB-GENE-030102-2 [details] [associations]
            symbol:zcchc7 "zinc finger, CCHC domain containing 7"
            species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 ZFIN:ZDB-GENE-030102-2
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GeneTree:ENSGT00510000048226 EMBL:BX511134
            EMBL:BX284619 EMBL:CR786570 IPI:IPI00996291
            Ensembl:ENSDART00000129066 ArrayExpress:F1QLY2 Bgee:F1QLY2
            Uniprot:F1QLY2
        Length = 627

 Score = 136 (52.9 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 27/84 (32%), Positives = 40/84 (47%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C +C KTGH +++C T  +    +  C+ C   GH+   C N + C NC   GH + DC 
Sbjct:   276 CRNCNKTGHLSKNCPTLKK----VPCCSLCGLRGHLLRTCPN-RHCSNCSLPGHTSDDCL 330

Query:    71 NEPV----CNLCNIAGHVARQCPK 90
                     C+ C + GH    CP+
Sbjct:   331 ERAFWYKRCHRCGMTGHFIDACPQ 354

 Score = 116 (45.9 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
 Identities = 22/64 (34%), Positives = 37/64 (57%)

Query:    35 RLCNNCYKPGHIAADCT----NDKA--CKNCRKTGHIARDC---QNEPVCNLCNIAGHVA 85
             ++ N  + P H+    T     +K+  C+NC KTGH++++C   +  P C+LC + GH+ 
Sbjct:   249 QIYNKGHGPRHVPNRSTYRYYTEKSITCRNCNKTGHLSKNCPTLKKVPCCSLCGLRGHLL 308

Query:    86 RQCP 89
             R CP
Sbjct:   309 RTCP 312

 Score = 70 (29.7 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query:   128 CRSCNQMGHMSRDCVGPLII---CRNCGGRGHMAYECP 162
             C +C+  GH S DC+        C  CG  GH    CP
Sbjct:   316 CSNCSLPGHTSDDCLERAFWYKRCHRCGMTGHFIDACP 353

 Score = 55 (24.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 8/24 (33%), Positives = 13/24 (54%)

Query:   148 CRNCGGRGHMAYECPSGRIADRGY 171
             C NC  +GH  ++C   R+ +  Y
Sbjct:   383 CYNCSRKGHFGHQCSQRRMYNWSY 406

 Score = 41 (19.5 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
 Identities = 5/14 (35%), Positives = 8/14 (57%)

Query:   128 CRSCNQMGHMSRDC 141
             C +C++ GH    C
Sbjct:   383 CYNCSRKGHFGHQC 396


>WB|WBGene00019537 [details] [associations]
            symbol:K08D12.3 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
            [GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 GO:GO:0009792 GO:GO:0040007
            GO:GO:0002119 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
            GO:GO:0000003 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            HOGENOM:HOG000186262 KO:K09250 OMA:FQFMSSS
            GeneTree:ENSGT00510000047065 EMBL:FO081610 GeneID:176979
            KEGG:cel:CELE_K08D12.3 UCSC:K08D12.3a.1 CTD:176979 NextBio:894830
            RefSeq:NP_741323.1 ProteinModelPortal:Q966I7 SMR:Q966I7
            STRING:Q966I7 PRIDE:Q966I7 EnsemblMetazoa:K08D12.3a.1
            EnsemblMetazoa:K08D12.3a.2 WormBase:K08D12.3a InParanoid:Q966I7
            ArrayExpress:Q966I7 Uniprot:Q966I7
        Length = 151

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 28/86 (32%), Positives = 40/86 (46%)

Query:     9 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARD 68
             G C++CG  GH +RDC +    GG     +  Y            + C NC ++GHI+R+
Sbjct:    67 GSCYNCGGRGHYSRDCPSARSEGG-----SGGYGGRGGEGRSFGGQKCYNCGRSGHISRE 121

Query:    69 CQN-----EPVCNLCNIAGHVARQCP 89
             C       E  C  C   GH++R CP
Sbjct:   122 CTESGSAEEKRCYQCQETGHISRDCP 147

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 18/41 (43%), Positives = 27/41 (65%)

Query:    37 CNNCYKPGHIAADCTN-----DKACKNCRKTGHIARDCQNE 72
             C NC + GHI+ +CT      +K C  C++TGHI+RDC ++
Sbjct:   109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPSQ 149

 Score = 103 (41.3 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 26/88 (29%), Positives = 34/88 (38%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDL-----RLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             C+ C + GH +R+C      GG         C NC + GH + DC    +    R  G  
Sbjct:     6 CYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGSGGGQRGGGGG 65

Query:    66 ARDCQNEPVCNLCNIAGHVARQCPKGDS 93
                C N      C   GH +R CP   S
Sbjct:    66 GGSCYN------CGGRGHYSRDCPSARS 87

 Score = 101 (40.6 bits), Expect = 7.4e-05, P = 7.4e-05
 Identities = 26/93 (27%), Positives = 41/93 (44%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLR------LCNNCYKPGHIAADCTNDKACKNCRKTGH 64
             C++C +TGH +RDC      GG          C NC   GH + DC + ++       G+
Sbjct:    37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSARS--EGGSGGY 94

Query:    65 IARDCQNEPV----CNLCNIAGHVARQCPKGDS 93
               R  +        C  C  +GH++R+C +  S
Sbjct:    95 GGRGGEGRSFGGQKCYNCGRSGHISRECTESGS 127

 Score = 95 (38.5 bits), Expect = 0.00083, P = 0.00083
 Identities = 21/50 (42%), Positives = 25/50 (50%)

Query:   128 CRSCNQMGHMSRDCV------------GPLIICRNCGGRGHMAYECPSGR 165
             C +C + GH SRDC             G    C NCGGRGH + +CPS R
Sbjct:    37 CYNCQETGHFSRDCPKGGSGGGQRGGGGGGGSCYNCGGRGHYSRDCPSAR 86

 Score = 88 (36.0 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query:    52 NDKACKNCRKTGHIARDCQNEP------------VCNLCNIAGHVARQCPKGDS 93
             +D+ C  C++ GHI+R+C N               C  C   GH +R CPKG S
Sbjct:     2 SDRNCYKCQQPGHISRNCPNGESDGGRRGGGGGSTCYNCQETGHFSRDCPKGGS 55

 Score = 75 (31.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query:   128 CRSCNQMGHMSRDCV--GPLII--CRNCGGRGHMAYECPS 163
             C +C + GH+SR+C   G      C  C   GH++ +CPS
Sbjct:   109 CYNCGRSGHISRECTESGSAEEKRCYQCQETGHISRDCPS 148

 Score = 54 (24.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query:   148 CRNCGGRGHMAYECPSGRIAD 168
             C NCG  GH++ EC     A+
Sbjct:   109 CYNCGRSGHISRECTESGSAE 129


>SGD|S000002334 [details] [associations]
            symbol:AIR2 "RNA-binding subunit of the TRAMP nuclear RNA
            surveillance complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0030674 "protein binding, bridging" evidence=IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IDA] [GO:0031499 "TRAMP complex" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IGI;IDA] [GO:0043629 "ncRNA
            polyadenylation" evidence=IDA] [GO:0071039 "nuclear
            polyadenylation-dependent CUT catabolic process" evidence=IGI]
            [GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
            process" evidence=IGI] [GO:0071037 "nuclear
            polyadenylation-dependent snRNA catabolic process" evidence=IGI]
            [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end processing"
            evidence=IGI] [GO:0071038 "nuclear polyadenylation-dependent tRNA
            catabolic process" evidence=IDA] [GO:0071035 "nuclear
            polyadenylation-dependent rRNA catabolic process" evidence=IGI]
            [GO:0006400 "tRNA modification" evidence=IMP] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 SGD:S000002334 GO:GO:0005730
            GO:GO:0046872 GO:GO:0008270 EMBL:BK006938 GO:GO:0030674
            GO:GO:0003723 GO:GO:0006400 eggNOG:COG5082 OrthoDB:EOG4F21BK
            GO:GO:0031499 Gene3D:4.10.60.10 InterPro:IPR016713
            PIRSF:PIRSF018162 SUPFAM:SSF57756 GeneTree:ENSGT00510000048226
            HOGENOM:HOG000000966 KO:K12597 GO:GO:0043629 GO:GO:0071031
            GO:GO:0071039 GO:GO:0071035 GO:GO:0071036 GO:GO:0071037
            GO:GO:0071038 EMBL:Z74223 EMBL:Z67750 PIR:S61037 RefSeq:NP_010106.1
            PDB:2LLI PDB:3NYB PDBsum:2LLI PDBsum:3NYB ProteinModelPortal:Q12476
            SMR:Q12476 DIP:DIP-2543N IntAct:Q12476 MINT:MINT-543316
            STRING:Q12476 PaxDb:Q12476 PeptideAtlas:Q12476 EnsemblFungi:YDL175C
            GeneID:851379 KEGG:sce:YDL175C CYGD:YDL175c
            EvolutionaryTrace:Q12476 NextBio:968516 Genevestigator:Q12476
            GermOnline:YDL175C Uniprot:Q12476
        Length = 344

 Score = 112 (44.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 21/54 (38%), Positives = 27/54 (50%)

Query:    37 CNNCYKPGHIAADCTNDKACKNCRKTG-HIARDCQNEPVCNLCNIAGHVARQCP 89
             CNNC + GH+  DC +   C  C  T  H +R C     C+ C+  GH   QCP
Sbjct:    63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPKAIQCSKCDEVGHYRSQCP 115

 Score = 87 (35.7 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query:    56 CKNCRKTGHIARDCQNEPVCNLCNIAG-HVARQCPK 90
             C NC + GH+ +DC +  +C+ C     H +R CPK
Sbjct:    63 CNNCSQRGHLKKDCPHI-ICSYCGATDDHYSRHCPK 97

 Score = 63 (27.2 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query:   146 IICRNCGGRGHMAYECPSGR 165
             I C NCGG+GH   +C   R
Sbjct:   162 IYCYNCGGKGHFGDDCKEKR 181

 Score = 59 (25.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
 Identities = 11/38 (28%), Positives = 16/38 (42%)

Query:   128 CRSCNQMGHMSRDCVGPL--IICRNCGGRGHMAYECPS 163
             C  C+++GH    C      + C  C  + H    CPS
Sbjct:   101 CSKCDEVGHYRSQCPHKWKKVQCTLCKSKKHSKERCPS 138

 Score = 53 (23.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query:   123 YHDVICRSCNQMGHMSRDC 141
             +H + C +C   GH   DC
Sbjct:   159 FHTIYCYNCGGKGHFGDDC 177


>WB|WBGene00001598 [details] [associations]
            symbol:glh-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
            "post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] [GO:0016070 "RNA metabolic process"
            evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
            "RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
            [GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
            "DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
            Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
            SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
            GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
            PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 105 (42.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 63
             C +C + GHR+ DC    +   + R+C NC +PGH + +CT ++  +  R  G
Sbjct:   160 CFNCQQPGHRSSDCP-EPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211

 Score = 94 (38.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH ++DC   +       C NC++ GH +R+C  E
Sbjct:   160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEE 201

 Score = 92 (37.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C +C   GH S +C  P   C NCG +GH + ECP+
Sbjct:   244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279

 Score = 53 (23.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 162
             C +C + GH S +C  P        G G  A   P
Sbjct:   264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298


>UNIPROTKB|P34689 [details] [associations]
            symbol:glh-1 "ATP-dependent RNA helicase glh-1"
            species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
            InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
            GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
            GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
            EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
            ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
            PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
            KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
            InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
        Length = 763

 Score = 105 (42.0 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 63
             C +C + GHR+ DC    +   + R+C NC +PGH + +CT ++  +  R  G
Sbjct:   160 CFNCQQPGHRSSDCP-EPRKEREPRVCYNCQQPGHTSRECTEERKPREGRTGG 211

 Score = 94 (38.1 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query:    37 CNNCYKPGHIAADCTNDK------ACKNCRKTGHIARDCQNE 72
             C NC +PGH ++DC   +       C NC++ GH +R+C  E
Sbjct:   160 CFNCQQPGHRSSDCPEPRKEREPRVCYNCQQPGHTSRECTEE 201

 Score = 92 (37.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECPS 163
             C +C   GH S +C  P   C NCG +GH + ECP+
Sbjct:   244 CFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPN 279

 Score = 53 (23.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query:   128 CRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYECP 162
             C +C + GH S +C  P        G G  A   P
Sbjct:   264 CFNCGEQGHRSNECPNPAKPREGVEGEGPKATYVP 298


>SGD|S000001341 [details] [associations]
            symbol:AIR1 "Zinc knuckle protein" species:4932
            "Saccharomyces cerevisiae" [GO:0071036 "nuclear
            polyadenylation-dependent snoRNA catabolic process" evidence=IGI]
            [GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
            process" evidence=IGI] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0071035 "nuclear polyadenylation-dependent rRNA
            catabolic process" evidence=IGI] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IGI;IDA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0071031 "nuclear mRNA surveillance of mRNA 3'-end
            processing" evidence=IGI] [GO:0043629 "ncRNA polyadenylation"
            evidence=IDA] [GO:0071038 "nuclear polyadenylation-dependent tRNA
            catabolic process" evidence=IDA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0071037 "nuclear polyadenylation-dependent snRNA
            catabolic process" evidence=IGI] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 SGD:S000001341 GO:GO:0005737 GO:GO:0005730
            GO:GO:0046872 EMBL:BK006942 GO:GO:0008270 GO:GO:0003676
            eggNOG:COG5082 OrthoDB:EOG4F21BK GO:GO:0031499 Gene3D:4.10.60.10
            InterPro:IPR016713 PIRSF:PIRSF018162 SUPFAM:SSF57756 EMBL:Z37997
            PIR:S48365 RefSeq:NP_012186.1 ProteinModelPortal:P40507 SMR:P40507
            DIP:DIP-2700N IntAct:P40507 MINT:MINT-518330 STRING:P40507
            PaxDb:P40507 PeptideAtlas:P40507 EnsemblFungi:YIL079C GeneID:854731
            KEGG:sce:YIL079C CYGD:YIL079c GeneTree:ENSGT00510000048226
            HOGENOM:HOG000000966 KO:K12597 OMA:HISADCK NextBio:977425
            Genevestigator:P40507 GermOnline:YIL079C GO:GO:0043629
            GO:GO:0071031 GO:GO:0071039 GO:GO:0071035 GO:GO:0071036
            GO:GO:0071037 GO:GO:0071038 Uniprot:P40507
        Length = 360

 Score = 116 (45.9 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 25/83 (30%), Positives = 35/83 (42%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNC-YKPGHIAADCTNDKACKNCRKTGHIARDC 69
             C++C + GH  R+C  HV       +C  C +   H +  C     C NC   GH    C
Sbjct:    76 CNNCSQRGHLKRNCP-HV-------ICTYCGFMDDHYSQHCPKAIICTNCNANGHYKSQC 127

Query:    70 QNE---PVCNLCNIAGHVARQCP 89
              ++     C LCN   H   +CP
Sbjct:   128 PHKWKKVFCTLCNSKRHSRERCP 150

 Score = 81 (33.6 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query:    56 CKNCRKTGHIARDCQNEPVCNLCNIAG-HVARQCPK 90
             C NC + GH+ R+C +  +C  C     H ++ CPK
Sbjct:    76 CNNCSQRGHLKRNCPHV-ICTYCGFMDDHYSQHCPK 110

 Score = 81 (33.6 bits), Expect = 0.00042, Sum P(2) = 0.00042
 Identities = 17/38 (44%), Positives = 19/38 (50%)

Query:   126 VICRSCNQMG-HMSRDCVGPLIICRNCGGRGHMAYECP 162
             VIC  C  M  H S+ C    IIC NC   GH   +CP
Sbjct:    92 VICTYCGFMDDHYSQHCP-KAIICTNCNANGHYKSQCP 128

 Score = 72 (30.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
 Identities = 13/40 (32%), Positives = 17/40 (42%)

Query:   126 VICRSCNQMGHMSRDCVGPL--IICRNCGGRGHMAYECPS 163
             +IC +CN  GH    C      + C  C  + H    CPS
Sbjct:   112 IICTNCNANGHYKSQCPHKWKKVFCTLCNSKRHSRERCPS 151

 Score = 63 (27.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query:    72 EPVCNLCNIAGHVARQCP 89
             EP CN C+  GH+ R CP
Sbjct:    73 EPKCNNCSQRGHLKRNCP 90

 Score = 54 (24.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
 Identities = 8/20 (40%), Positives = 10/20 (50%)

Query:   146 IICRNCGGRGHMAYECPSGR 165
             + C NCG  GH   +C   R
Sbjct:   173 VFCYNCGNAGHFGDDCAERR 192

 Score = 49 (22.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
 Identities = 7/19 (36%), Positives = 9/19 (47%)

Query:   123 YHDVICRSCNQMGHMSRDC 141
             +  V C +C   GH   DC
Sbjct:   170 FQTVFCYNCGNAGHFGDDC 188


>POMBASE|SPBP35G2.08c [details] [associations]
            symbol:air1 "zinc knuckle TRAMP complex subunit Air1"
            species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016075 "rRNA catabolic
            process" evidence=ISO] [GO:0016076 "snRNA catabolic process"
            evidence=ISO] [GO:0016077 "snoRNA catabolic process" evidence=ISO]
            [GO:0016078 "tRNA catabolic process" evidence=ISO] [GO:0031499
            "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA polyadenylation
            involved in polyadenylation-dependent ncRNA catabolic process"
            evidence=ISO] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 PomBase:SPBP35G2.08c GO:GO:0005730 GO:GO:0046872
            EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0003676
            RefSeq:NP_595383.2 HSSP:Q9H9Z2 STRING:Q9P795
            EnsemblFungi:SPBP35G2.08c.1 GeneID:2541349 eggNOG:COG5082
            OrthoDB:EOG4F21BK NextBio:20802458 GO:GO:0031499 GO:GO:0043630
            GO:GO:0016075 GO:GO:0016077 GO:GO:0016076 GO:GO:0016078
            Gene3D:4.10.60.10 InterPro:IPR016713 PIRSF:PIRSF018162
            SUPFAM:SSF57756 Uniprot:Q9P795
        Length = 315

 Score = 132 (51.5 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
 Identities = 32/87 (36%), Positives = 40/87 (45%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYK-PGHIAADCTNDKACKNCRKTGHIARD 68
             +CH+C   GH ++DC  HV       LC  C     HI+  C   K C NC   GHIA  
Sbjct:    90 VCHNCKGNGHISKDCP-HV-------LCTTCGAIDDHISVRCPWTKKCMNCGLLGHIAAR 141

Query:    69 CQNEP------VCNLCNIAGHVARQCP 89
             C +EP      VC  C+   H +  CP
Sbjct:   142 C-SEPRKRGPRVCRTCHTDTHTSSTCP 167

 Score = 88 (36.0 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 15/46 (32%), Positives = 26/46 (56%)

Query:    45 HIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCN-IAGHVARQCP 89
             +  +D +    C NC+  GHI++DC +  +C  C  I  H++ +CP
Sbjct:    80 YFGSDPSESIVCHNCKGNGHISKDCPHV-LCTTCGAIDDHISVRCP 124

 Score = 62 (26.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query:   128 CRSCNQMGHMSRDCVGPLI----ICRNCGGRGHMAYECP 162
             C +C  +GH++  C  P      +CR C    H +  CP
Sbjct:   129 CMNCGLLGHIAARCSEPRKRGPRVCRTCHTDTHTSSTCP 167

 Score = 44 (20.5 bits), Expect = 0.00037, Sum P(3) = 0.00037
 Identities = 9/20 (45%), Positives = 12/20 (60%)

Query:   127 ICRSCNQMGHMSRDCVGPLI 146
             +CR+C+   H S  C  PLI
Sbjct:   152 VCRTCHTDTHTSSTC--PLI 169

 Score = 34 (17.0 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
 Identities = 5/14 (35%), Positives = 6/14 (42%)

Query:   148 CRNCGGRGHMAYEC 161
             C NC    H   +C
Sbjct:   191 CYNCASDEHFGDDC 204

 Score = 34 (17.0 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
 Identities = 6/17 (35%), Positives = 7/17 (41%)

Query:   128 CRSCNQMGHMSRDCVGP 144
             C +C    H   DC  P
Sbjct:   191 CYNCASDEHFGDDCTLP 207


>CGD|CAL0005378 [details] [associations]
            symbol:orf19.4844 species:5476 "Candida albicans" [GO:0005730
            "nucleolus" evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA]
            [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
            process" evidence=IEA] [GO:0071037 "nuclear
            polyadenylation-dependent snRNA catabolic process" evidence=IEA]
            [GO:0071039 "nuclear polyadenylation-dependent CUT catabolic
            process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
            evidence=IEA] [GO:0006400 "tRNA modification" evidence=IEA]
            [GO:0071036 "nuclear polyadenylation-dependent snoRNA catabolic
            process" evidence=IEA] [GO:0071031 "nuclear mRNA surveillance of
            mRNA 3'-end processing" evidence=IEA] [GO:0071038 "nuclear
            polyadenylation-dependent tRNA catabolic process" evidence=IEA]
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0004652 "polynucleotide
            adenylyltransferase activity" evidence=IEA] [GO:0030674 "protein
            binding, bridging" evidence=IEA] InterPro:IPR001878 Pfam:PF00098
            PROSITE:PS50158 SMART:SM00343 CGD:CAL0005378 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 EMBL:AACQ01000001 EMBL:AACQ01000002
            eggNOG:COG5082 Gene3D:4.10.60.10 InterPro:IPR016713
            PIRSF:PIRSF018162 SUPFAM:SSF57756 KO:K12597 RefSeq:XP_723340.1
            RefSeq:XP_723530.1 STRING:Q5APC1 GeneID:3634843 GeneID:3634974
            KEGG:cal:CaO19.12307 KEGG:cal:CaO19.4844 Uniprot:Q5APC1
        Length = 381

 Score = 108 (43.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
 Identities = 21/54 (38%), Positives = 24/54 (44%)

Query:    36 LCNNCYKPGHIAADCTNDKACKNCRKTG-HIARDCQNEPVCNLCNIAGHVARQC 88
             LC NCYK GH  A CT    C  C     H    C    +C+ C   GH+  QC
Sbjct:    87 LCANCYKRGHTRAKCTV-VICHKCGAIDDHYESQCPTTIICSRCGEKGHIVSQC 139

 Score = 57 (25.1 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
 Identities = 18/51 (35%), Positives = 22/51 (43%)

Query:   123 YHDVICRSCNQMGHMSRDCVGPLIICRNCGGRGHMAYEC--P-SGRIADRG 170
             +   I +S +Q G      V P I C NC    H   EC  P S RI + G
Sbjct:   166 WRSYITKSPSQ-GENEESSVLPRIYCYNCASNEHFGDECDKPRSSRIPNFG 215


>UNIPROTKB|Q65XV7 [details] [associations]
            symbol:P0016H04.11 "Os05g0111000 protein" species:39947
            "Oryza sativa Japonica Group" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR001878 InterPro:IPR004365
            InterPro:IPR004591 InterPro:IPR007199 Pfam:PF00098 Pfam:PF01336
            Pfam:PF04057 PROSITE:PS50158 SMART:SM00343 GO:GO:0005634
            GO:GO:0046872 GO:GO:0003677 GO:GO:0006260 GO:GO:0008270
            EMBL:AP008211 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
            Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:CM000142 InterPro:IPR013955
            Pfam:PF08646 eggNOG:COG1599 KO:K07466 TIGRFAMs:TIGR00617
            HOGENOM:HOG000162322 EMBL:AC079356 RefSeq:NP_001054445.1
            UniGene:Os.53618 IntAct:Q65XV7 EnsemblPlants:LOC_Os05g02040.1
            GeneID:4337594 KEGG:osa:4337594 OMA:RWTIKVR ProtClustDB:CLSN2695308
            Uniprot:Q65XV7
        Length = 951

 Score = 143 (55.4 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 31/76 (40%), Positives = 40/76 (52%)

Query:     1 MASNCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC----TNDKAC 56
             +A N  +E  C+ C + GH ARDC    QS G L  C  C +PGH + DC    T    C
Sbjct:   853 IAGNGSSE--CYKCKQPGHYARDCPG--QSTGGLE-CFKCKQPGHFSRDCPVQSTGGSEC 907

Query:    57 KNCRKTGHIARDCQNE 72
               C++ GH ARDC  +
Sbjct:   908 FKCKQPGHFARDCPGQ 923

 Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
 Identities = 33/105 (31%), Positives = 43/105 (40%)

Query:     3 SNCHNEGICH-----SCGKTGHRARDCSTHVQ-SGGDLRLCNNCYKPGHIAADC----TN 52
             +N H+  ICH        +T         +   +G     C  C +PGH A DC    T 
Sbjct:   821 ANGHSAQICHVGADMDMQETSAGGSSMGNYNSIAGNGSSECYKCKQPGHYARDCPGQSTG 880

Query:    53 DKACKNCRKTGHIARDCQNEPV----CNLCNIAGHVARQCPKGDS 93
                C  C++ GH +RDC  +      C  C   GH AR CP G S
Sbjct:   881 GLECFKCKQPGHFSRDCPVQSTGGSECFKCKQPGHFARDCP-GQS 924


>UNIPROTKB|G4MQ81 [details] [associations]
            symbol:MGG_09256 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597
            EMBL:CM001231 RefSeq:XP_003709886.1 ProteinModelPortal:G4MQ81
            EnsemblFungi:MGG_09256T0 GeneID:2680192 KEGG:mgr:MGG_09256
            Uniprot:G4MQ81
        Length = 695

 Score = 111 (44.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 24/78 (30%), Positives = 31/78 (39%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQ 70
             C  C K GHRA DC            C +C    H +A C     C  C+  GHI + C 
Sbjct:   401 CVICAKNGHRANDCPPPT--------CRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCP 452

Query:    71 NEPVCNLCNIAGHVARQC 88
              +    L + AG    +C
Sbjct:   453 EK----LASAAGEAELEC 466

 Score = 106 (42.4 bits), Expect = 4.1e-06, Sum P(3) = 4.1e-06
 Identities = 18/54 (33%), Positives = 25/54 (46%)

Query:    37 CNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             C  C K GH A DC     C++C+   H +  C     C  C   GH+ + CP+
Sbjct:   401 CVICAKNGHRANDCP-PPTCRHCQNQDHTSAQCPKRVRCTKCQHLGHIKKSCPE 453

 Score = 37 (18.1 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 5/14 (35%), Positives = 7/14 (50%)

Query:   148 CRNCGGRGHMAYEC 161
             C +CG   H   +C
Sbjct:   503 CYSCGADNHFGGDC 516

 Score = 37 (18.1 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
 Identities = 6/14 (42%), Positives = 6/14 (42%)

Query:   128 CRSCNQMGHMSRDC 141
             C SC    H   DC
Sbjct:   503 CYSCGADNHFGGDC 516

 Score = 34 (17.0 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 6/20 (30%), Positives = 9/20 (45%)

Query:   122 GYHDVICRSCNQMGHMSRDC 141
             G  ++ C  C    H+  DC
Sbjct:   460 GEAELECAVCCATDHLEDDC 479


>UNIPROTKB|F1PQG8 [details] [associations]
            symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
            Ensembl:ENSCAFT00000039080 OMA:ILIRNET Uniprot:F1PQG8
        Length = 280

 Score = 130 (50.8 bits), Expect = 3.8e-08, P = 3.8e-08
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   207 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 264


>UNIPROTKB|J9P281 [details] [associations]
            symbol:ZCCHC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00530000063983 EMBL:AAEX03013862 EMBL:AAEX03013863
            Ensembl:ENSCAFT00000048621 Uniprot:J9P281
        Length = 291

 Score = 130 (50.8 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   218 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 275


>UNIPROTKB|F1S7I8 [details] [associations]
            symbol:ZCCHC3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            OMA:ERPLQDE GeneTree:ENSGT00530000063983 EMBL:CU606854
            RefSeq:XP_003134416.1 Ensembl:ENSSSCT00000007891 GeneID:100519451
            KEGG:ssc:100519451 Uniprot:F1S7I8
        Length = 402

 Score = 130 (50.8 bits), Expect = 8.3e-08, P = 8.3e-08
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   329 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 386


>UNIPROTKB|A1A4J3 [details] [associations]
            symbol:ZCCHC3 "Zinc finger, CCHC domain containing 3"
            species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 CTD:85364 eggNOG:NOG263295 HOGENOM:HOG000115679
            HOVERGEN:HBG068441 OMA:ERPLQDE OrthoDB:EOG461443 EMBL:DAAA02036379
            EMBL:BC126595 IPI:IPI00716774 RefSeq:NP_001073703.1 UniGene:Bt.923
            Ensembl:ENSBTAT00000002733 GeneID:507116 KEGG:bta:507116
            GeneTree:ENSGT00530000063983 InParanoid:A1A4J3 NextBio:20867907
            Uniprot:A1A4J3
        Length = 404

 Score = 130 (50.8 bits), Expect = 8.4e-08, P = 8.4e-08
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388


>UNIPROTKB|Q9NUD5 [details] [associations]
            symbol:ZCCHC3 "Zinc finger CCHC domain-containing protein
            3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL034548 EMBL:BC069238 IPI:IPI00011550
            RefSeq:NP_149080.2 UniGene:Hs.28608 UniGene:Hs.603608
            ProteinModelPortal:Q9NUD5 SMR:Q9NUD5 IntAct:Q9NUD5
            PhosphoSite:Q9NUD5 DMDM:23396534 PaxDb:Q9NUD5 PRIDE:Q9NUD5
            Ensembl:ENST00000382352 GeneID:85364 KEGG:hsa:85364 UCSC:uc002wdf.3
            CTD:85364 GeneCards:GC20P000278 H-InvDB:HIX0015550
            H-InvDB:HIX0138064 HGNC:HGNC:16230 HPA:HPA042972 neXtProt:NX_Q9NUD5
            PharmGKB:PA25806 eggNOG:NOG263295 HOGENOM:HOG000115679
            HOVERGEN:HBG068441 InParanoid:Q9NUD5 OMA:ERPLQDE OrthoDB:EOG461443
            PhylomeDB:Q9NUD5 GenomeRNAi:85364 NextBio:75891 Bgee:Q9NUD5
            CleanEx:HS_ZCCHC3 Genevestigator:Q9NUD5 GermOnline:ENSG00000177764
            Uniprot:Q9NUD5
        Length = 404

 Score = 130 (50.8 bits), Expect = 8.4e-08, P = 8.4e-08
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   331 GQPKTCFKCGSRTHMSGSCTQDR-CFRCGEEGHLSPYCRKGIVCNLCGKRGHAFAQCPK 388


>RGD|1585203 [details] [associations]
            symbol:Zcchc3 "zinc finger, CCHC domain containing 3"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            RGD:1585203 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH474050
            Gene3D:4.10.60.10 SUPFAM:SSF57756 CTD:85364 OMA:ERPLQDE
            OrthoDB:EOG461443 GeneTree:ENSGT00530000063983 IPI:IPI00957928
            RefSeq:XP_001072887.2 RefSeq:XP_002726297.1
            Ensembl:ENSRNOT00000009859 GeneID:690005 KEGG:rno:690005
            UCSC:RGD:1585203 NextBio:739977 Uniprot:D3ZZ10
        Length = 400

 Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 23/59 (38%), Positives = 31/59 (52%)

Query:    32 GDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPK 90
             G  + C  C    H++  CT D+ C  C + GH++  C+   VCNLC   GH   QCPK
Sbjct:   327 GQPKTCFKCGSRTHMSGTCTQDR-CFRCGEEGHLSPYCRKVIVCNLCGKRGHAFAQCPK 384


>TAIR|locus:2156647 [details] [associations]
            symbol:AT5G52380 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
            evidence=RCA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 EMBL:AB019226 Gene3D:4.10.60.10 SUPFAM:SSF57756
            InterPro:IPR025836 Pfam:PF14392 EMBL:BT025034 IPI:IPI00544651
            RefSeq:NP_200051.1 UniGene:At.29618 ProteinModelPortal:Q9FHC2
            SMR:Q9FHC2 PRIDE:Q9FHC2 EnsemblPlants:AT5G52380.1 GeneID:835314
            KEGG:ath:AT5G52380 TAIR:At5g52380 InParanoid:Q9FHC2 OMA:KLCYNCG
            PhylomeDB:Q9FHC2 ProtClustDB:CLSN2686088 Genevestigator:Q9FHC2
            Uniprot:Q9FHC2
        Length = 268

 Score = 124 (48.7 bits), Expect = 1.6e-07, P = 1.6e-07
 Identities = 27/96 (28%), Positives = 44/96 (45%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADC--------TNDKACKNCRK 61
             IC  C + GH  ++C        + +LC NC   GH  + C        T   +C  C+ 
Sbjct:   100 ICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKG 159

Query:    62 TGHIARDC-QNE----PV---CNLCNIAGHVARQCP 89
              GHI+++C +N+    P+   C +C    H+ + CP
Sbjct:   160 QGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCP 195

 Score = 112 (44.5 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query:    10 ICHSCGKTGHRARDCSTHVQSGGD-LRLCNNCYKPGHIAADCTNDK--------ACKNCR 60
             +C++CG TGH    C   ++ GG     C  C   GHI+ +C  +K         CK C 
Sbjct:   126 LCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHGIYPMGGCCKVCG 185

Query:    61 KTGHIARDCQNE 72
                H+ +DC ++
Sbjct:   186 SVAHLVKDCPDK 197

 Score = 80 (33.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 21/66 (31%), Positives = 27/66 (40%)

Query:    37 CNNCYKPGHIAADCTN------DKACKNCRKTGHIARDC---QNEP----VCNLCNIAGH 83
             C  C+   HIA  C        +K C  CR+ GH  ++C    NE     +C  C   GH
Sbjct:    76 CFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKNCPEKNNESSEKKLCYNCGDTGH 135

Query:    84 VARQCP 89
                 CP
Sbjct:   136 SLSHCP 141

 Score = 64 (27.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query:   128 CRSCNQMGHMSRDC------VGPLI-ICRNCGGRGHMAYECP 162
             C  C   GH+S++C      + P+   C+ CG   H+  +CP
Sbjct:   154 CFICKGQGHISKNCPENKHGIYPMGGCCKVCGSVAHLVKDCP 195


>TAIR|locus:2078526 [details] [associations]
            symbol:AT3G42860 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=RCA] [GO:0009640 "photomorphogenesis"
            evidence=RCA] [GO:0010212 "response to ionizing radiation"
            evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
            [GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
            "histone methylation" evidence=RCA] [GO:0016579 "protein
            deubiquitination" evidence=RCA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=RCA] InterPro:IPR001878
            InterPro:IPR010666 Pfam:PF00098 Pfam:PF06839 PROSITE:PS50158
            SMART:SM00343 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AL138654 EMBL:AY065276 EMBL:AY133785
            IPI:IPI00532574 PIR:T47344 RefSeq:NP_189872.1 UniGene:At.28534
            ProteinModelPortal:Q9M1L9 SMR:Q9M1L9 EnsemblPlants:AT3G42860.1
            GeneID:823332 KEGG:ath:AT3G42860 TAIR:At3g42860
            HOGENOM:HOG000006218 InParanoid:Q9M1L9 OMA:CGFFKWC PhylomeDB:Q9M1L9
            ProtClustDB:CLSN2684249 ArrayExpress:Q9M1L9 Genevestigator:Q9M1L9
            Uniprot:Q9M1L9
        Length = 372

 Score = 126 (49.4 bits), Expect = 2.0e-07, P = 2.0e-07
 Identities = 40/142 (28%), Positives = 50/142 (35%)

Query:    11 CHSCGKTGHRARDCSTHVQSG--------GDLRLCNNCYKPGHIAADCTNDKACKNCRKT 62
             C+ CGK GH ARDC+    +G        GD   C  C KPGH + DCT         + 
Sbjct:   239 CYKCGKEGHWARDCTVQSDTGPVKSTSAAGD---CFKCGKPGHWSRDCTAQSGNPKY-EP 294

Query:    63 GHIARDCQNEPVCNLCNIAGHVARQCPKGDSLXXXXXXXXXXXXXXXXXXXXXXXXXYVG 122
             G + +   +   C  C   GH +R C  G S                             
Sbjct:   295 GQM-KSSSSSGECYKCGKQGHWSRDCT-GQSSNQQFQSGQAKSTSSTGD----------- 341

Query:   123 YHDVICRSCNQMGHMSRDCVGP 144
                  C  C + GH SRDC  P
Sbjct:   342 -----CYKCGKAGHWSRDCTSP 358

 Score = 114 (45.2 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 25/64 (39%), Positives = 35/64 (54%)

Query:     9 GICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARD 68
             G C  CGK GH +RDC+   QSG      N  Y+PG + +  ++ + C  C K GH +RD
Sbjct:   268 GDCFKCGKPGHWSRDCTA--QSG------NPKYEPGQMKSSSSSGE-CYKCGKQGHWSRD 318

Query:    69 CQNE 72
             C  +
Sbjct:   319 CTGQ 322


>UNIPROTKB|F1ST82 [details] [associations]
            symbol:ZCCHC7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 KO:K12597 OMA:EAQIANN EMBL:CU855828
            EMBL:CU861930 RefSeq:XP_003122068.1 Ensembl:ENSSSCT00000005885
            GeneID:100520354 KEGG:ssc:100520354 Uniprot:F1ST82
        Length = 545

 Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 19/46 (41%), Positives = 28/46 (60%)

Query:   120 YVGYHDVICRSCNQMGHMSRDCVGPLII--CRNCGGRGHMAYECPS 163
             Y    +V CR+CN+ GH+S++C  P  +  C  C  RGH+ Y CP+
Sbjct:   235 YSANKNVTCRNCNKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA 280

 Score = 103 (41.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 25/89 (28%), Positives = 41/89 (46%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C +C      
Sbjct:   238 NKNVTCRNCNKCGHLSKNCPFPQK----VRPCCLCSERGHLQYACPA-RFCLDCSLPMSS 292

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
             A  C   P     C+ C++ GH A  CP+
Sbjct:   293 AHRCLERPSWRKRCDRCDMIGHYADACPE 321

 Score = 65 (27.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NCG  GH  +EC   R+ ++ +
Sbjct:   347 LVYCYNCGQEGHYGHECTERRMFNQTF 373

 Score = 47 (21.6 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query:   126 VICRSCNQMGHMSRDC 141
             V C +C Q GH   +C
Sbjct:   348 VYCYNCGQEGHYGHEC 363


>WB|WBGene00017210 [details] [associations]
            symbol:F07E5.5 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
            "receptor-mediated endocytosis" evidence=IMP] InterPro:IPR001878
            Pfam:PF00098 PROSITE:PS50158 SMART:SM00343 GO:GO:0006898
            GO:GO:0040010 GO:GO:0046872 GO:GO:0008270 GO:GO:0040011
            GO:GO:0003676 GO:GO:0040035 eggNOG:COG5082 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:FO080110 PIR:T34410 RefSeq:NP_494168.1
            ProteinModelPortal:P91223 SMR:P91223 STRING:P91223 PaxDb:P91223
            EnsemblMetazoa:F07E5.5 GeneID:173564 KEGG:cel:CELE_F07E5.5
            UCSC:F07E5.5 CTD:173564 WormBase:F07E5.5
            GeneTree:ENSGT00510000047308 HOGENOM:HOG000021839 InParanoid:P91223
            OMA:INDWRAA NextBio:880195 Uniprot:P91223
        Length = 384

 Score = 121 (47.7 bits), Expect = 7.3e-07, P = 7.3e-07
 Identities = 31/95 (32%), Positives = 40/95 (42%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTND-------KACKNCRKTG 63
             C  C + GHR  DC     S  D  +C  C    H   +C            C  C++ G
Sbjct:   231 CFHCREPGHRLADCPKRNSSSSD-GVCFKCGSMEHSIHECKKKGVKGFPYATCFVCKQVG 289

Query:    64 HIARDC-QNE----P---VCNLCNIAGHVARQCPK 90
             HI+RDC QN     P    CN+C    H+ R CP+
Sbjct:   290 HISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCPE 324

 Score = 79 (32.9 bits), Expect = 0.00090, Sum P(2) = 0.00090
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query:   122 GYHDVICRSCNQMGHMSRDC------VGPLIICRN-CGGRGHMAYECP 162
             G+    C  C Q+GH+SRDC      V P   C N CG   H+  +CP
Sbjct:   276 GFPYATCFVCKQVGHISRDCHQNVNGVYPDGGCCNVCGANTHLRRDCP 323

 Score = 63 (27.2 bits), Expect = 0.00090, Sum P(2) = 0.00090
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query:    55 ACKNCRKTGHIARDC------QNEPVCNLCNIAGHVARQCPK 90
             AC +CR+ GH   DC       ++ VC  C    H   +C K
Sbjct:   230 ACFHCREPGHRLADCPKRNSSSSDGVCFKCGSMEHSIHECKK 271


>WB|WBGene00043995 [details] [associations]
            symbol:F40F12.9 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:Z30215
            GeneTree:ENSGT00390000010943 RefSeq:NP_001255048.1
            ProteinModelPortal:D5MCP3 SMR:D5MCP3 EnsemblMetazoa:F40F12.9a.1
            EnsemblMetazoa:F40F12.9a.2 GeneID:259311 KEGG:cel:CELE_F40F12.9
            CTD:259311 WormBase:F40F12.9a Uniprot:D5MCP3
        Length = 113

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 20/38 (52%), Positives = 24/38 (63%)

Query:   127 ICRSCNQMGHMSRDCVGPLI-ICRNCGGRGHMAYECPS 163
             IC +C+++GHMSRDC       C  CG RGH   ECPS
Sbjct:    28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPS 65

 Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 18/36 (50%), Positives = 21/36 (58%)

Query:    56 CKNCRKTGHIARDCQNE-P-VCNLCNIAGHVARQCP 89
             C NC K GH++RDC  E P  C  C   GH  R+CP
Sbjct:    29 CYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECP 64

 Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 16/39 (41%), Positives = 24/39 (61%)

Query:    36 LCNNCYKPGHIAADCTND--KACKNCRKTGHIARDCQNE 72
             +C NC+K GH++ DC  +  KAC  C   GH  R+C ++
Sbjct:    28 ICYNCHKLGHMSRDCPEEQPKACFKCGFRGHYYRECPSQ 66


>UNIPROTKB|P69730 [details] [associations]
            symbol:gag "Gag polyprotein" species:11670 "Equine
            infectious anemia virus (CLONE 1369)" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR000721 InterPro:IPR001878
            InterPro:IPR008916 InterPro:IPR008919 InterPro:IPR010999
            InterPro:IPR012344 Pfam:PF00098 Pfam:PF00607 PROSITE:PS50158
            SMART:SM00343 GO:GO:0019048 GO:GO:0046872 GO:GO:0005198
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GO:GO:0019028 EMBL:M16575 PIR:A03949 RefSeq:NP_056901.1
            ProteinModelPortal:P69730 SMR:P69730 IntAct:P69730 GeneID:1489984
            GO:GO:0019076 Gene3D:1.10.1200.30 Gene3D:1.10.150.90
            Gene3D:1.10.375.10 InterPro:IPR014834 Pfam:PF08723 SUPFAM:SSF47353
            SUPFAM:SSF47943 SUPFAM:SSF47836 Uniprot:P69730
        Length = 486

 Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query:    31 GGDLRL---CNNCYKPGHIAADCTNDKACKNCRKTGHIARDCQNEP 73
             GG L+    C NC KPGH+++ C   K C  C++ GH ++ C++ P
Sbjct:   374 GGPLKAAQTCYNCGKPGHLSSQCRAPKVCFKCKQPGHFSKQCRSVP 419


>UNIPROTKB|E2RIR0 [details] [associations]
            symbol:ZCCHC7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 OMA:EAQIANN EMBL:AAEX03007966
            Ensembl:ENSCAFT00000003709 Uniprot:E2RIR0
        Length = 418

 Score = 104 (41.7 bits), Expect = 0.00047, P = 0.00047
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query:   120 YVGYHDVICRSCNQMGHMSRDCVGPLII--CRNCGGRGHMAYECPS 163
             Y    +V CR+C++ GH+S++C  P  +  C  C  RGH+ Y CP+
Sbjct:   235 YSANKNVTCRNCDKCGHLSKNCPLPQKVRPCCLCSERGHLQYACPA 280

 Score = 90 (36.7 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 23/89 (25%), Positives = 38/89 (42%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C  C      
Sbjct:   238 NKNVTCRNCDKCGHLSKNCPLPQK----VRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
                C         C+ C++ GH A  CP+
Sbjct:   293 THRCLERSSWRKRCDRCDMIGHYADACPE 321

 Score = 65 (27.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NCG  GH  +EC   R+ ++ +
Sbjct:   347 LVYCYNCGQEGHYGHECTERRMFNQTF 373


>UNIPROTKB|Q8N3Z6 [details] [associations]
            symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
            7" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 EMBL:CH471071 Gene3D:4.10.60.10 SUPFAM:SSF57756
            KO:K12597 EMBL:AL158155 CTD:84186 OrthoDB:EOG4P5KBB EMBL:AK026264
            EMBL:AK074608 EMBL:AK315128 EMBL:AL512604 EMBL:BC022434
            EMBL:BC036940 EMBL:AF161349 IPI:IPI00166710 IPI:IPI00871360
            RefSeq:NP_115602.2 UniGene:Hs.654700 ProteinModelPortal:Q8N3Z6
            SMR:Q8N3Z6 MINT:MINT-1182798 STRING:Q8N3Z6 PhosphoSite:Q8N3Z6
            DMDM:226693603 PaxDb:Q8N3Z6 PRIDE:Q8N3Z6 DNASU:84186
            Ensembl:ENST00000322831 Ensembl:ENST00000336755 GeneID:84186
            KEGG:hsa:84186 UCSC:uc003zzq.3 UCSC:uc003zzs.1
            GeneCards:GC09P037120 HGNC:HGNC:26209 HPA:HPA020600 HPA:HPA021088
            HPA:HPA029522 neXtProt:NX_Q8N3Z6 PharmGKB:PA128394734
            eggNOG:NOG249334 HOVERGEN:HBG094757 InParanoid:Q8N3Z6 OMA:EAQIANN
            GenomeRNAi:84186 NextBio:73566 ArrayExpress:Q8N3Z6 Bgee:Q8N3Z6
            CleanEx:HS_ZCCHC7 Genevestigator:Q8N3Z6 GermOnline:ENSG00000147905
            Uniprot:Q8N3Z6
        Length = 543

 Score = 109 (43.4 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query:   120 YVGYHDVICRSCNQMGHMSRDCVGPLII--CRNCGGRGHMAYECPS 163
             Y    ++ICR+C++ GH+S++C  P  +  C  C  RGH+ Y CP+
Sbjct:   235 YSANKNIICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCPA 280

 Score = 88 (36.0 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
 Identities = 16/56 (28%), Positives = 26/56 (46%)

Query:    36 LCNNCYKPGHIAADCT---NDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQC 88
             +C NC K GH++ +C      + C  C + GH+   C   P+C  C +   +   C
Sbjct:   242 ICRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP-APLCEYCPVPKMLDHSC 296

 Score = 82 (33.9 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query:    56 CKNCRKTGHIARDC---QNEPVCNLCNIAGHVARQCP 89
             C+NC K GH++++C   +    C LC+  GH+   CP
Sbjct:   243 CRNCDKRGHLSKNCPLPRKVRRCFLCSRRGHLLYSCP 279

 Score = 60 (26.2 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query:   145 LIICRNCGGRGHMAYECPSGRIAD 168
             L  C +C  +GH  +ECP   + D
Sbjct:   347 LAYCYHCAQKGHYGHECPEREVYD 370

 Score = 38 (18.4 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
 Identities = 6/17 (35%), Positives = 9/17 (52%)

Query:   125 DVICRSCNQMGHMSRDC 141
             D  C  C+ +GH +  C
Sbjct:   303 DKQCDRCHMLGHYTDAC 319


>TAIR|locus:2183607 [details] [associations]
            symbol:AT5G36240 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AB026661
            IPI:IPI00533303 RefSeq:NP_198473.1 UniGene:At.55159
            ProteinModelPortal:Q9FG62 SMR:Q9FG62 PaxDb:Q9FG62 PRIDE:Q9FG62
            EnsemblPlants:AT5G36240.1 GeneID:833621 KEGG:ath:AT5G36240
            TAIR:At5g36240 eggNOG:NOG310171 HOGENOM:HOG000152454
            InParanoid:Q9FG62 OMA:EGHFEHQ PhylomeDB:Q9FG62
            ProtClustDB:CLSN2916402 Genevestigator:Q9FG62 Uniprot:Q9FG62
        Length = 254

 Score = 88 (36.0 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
 Identities = 29/102 (28%), Positives = 40/102 (39%)

Query:     6 HNEG---ICHSCGKTGHRARDCSTHVQSGGDLR-----LCNN-----CYKPGHIAADCTN 52
             HN+    +C  CG  GH    C  +  S  DL+     +CN+     C +PGH  +   +
Sbjct:    20 HNDDEAEVCLRCGGFGHDMTLCK-YEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVS 78

Query:    53 DKACKNCRKTGHIARDCQNE------PVCNLCNIAGHVARQC 88
                C  C + GH    C         P C +C   GH   QC
Sbjct:    79 ---CYRCGQLGHTGLACGRHYDDSVSPSCFICGREGHFEHQC 117

 Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
 Identities = 8/17 (47%), Positives = 13/17 (76%)

Query:   147 ICRNCGGRGHMAYECPS 163
             +C  C G+GH+A +CP+
Sbjct:   196 LCYECKGKGHIARDCPN 212

 Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:   127 ICRSCNQMGHMSRDC 141
             +C  C   GH++RDC
Sbjct:   196 LCYECKGKGHIARDC 210


>UNIPROTKB|F1M989 [details] [associations]
            symbol:Zcchc7 "Zinc finger CCHC domain-containing protein
            7" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            RGD:1310467 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 IPI:IPI00768279
            Ensembl:ENSRNOT00000017707 ArrayExpress:F1M989 Uniprot:F1M989
        Length = 512

 Score = 91 (37.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
 Identities = 23/89 (25%), Positives = 39/89 (43%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C +C      
Sbjct:   205 NKNVTCRNCDKRGHLSKNCPLPQK----VRPCCLCSERGHLQYGCPA-RYCLDCSLPMSS 259

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
                C         C+ C++ GH A  CP+
Sbjct:   260 THRCFERSSWRKRCDRCDMIGHYADACPE 288

 Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NC  +GH  +EC   R+ ++ +
Sbjct:   314 LVYCYNCAQKGHYGHECTERRMFNQAF 340


>RGD|1310467 [details] [associations]
            symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
            species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            RGD:1310467 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            KO:K12597 EMBL:CH473962 CTD:84186 HOGENOM:HOG000155768
            OrthoDB:EOG4P5KBB EMBL:BC161967 IPI:IPI00768279
            RefSeq:NP_001100128.1 UniGene:Rn.56971 ProteinModelPortal:B1WC15
            PhosphoSite:B1WC15 PRIDE:B1WC15 GeneID:298086 KEGG:rno:298086
            UCSC:RGD:1310467 NextBio:643136 ArrayExpress:B1WC15
            Genevestigator:B1WC15 Uniprot:B1WC15
        Length = 542

 Score = 91 (37.1 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
 Identities = 23/89 (25%), Positives = 39/89 (43%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C +C      
Sbjct:   235 NKNVTCRNCDKRGHLSKNCPLPQK----VRPCCLCSERGHLQYGCPA-RYCLDCSLPMSS 289

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
                C         C+ C++ GH A  CP+
Sbjct:   290 THRCFERSSWRKRCDRCDMIGHYADACPE 318

 Score = 63 (27.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NC  +GH  +EC   R+ ++ +
Sbjct:   344 LVYCYNCAQKGHYGHECTERRMFNQAF 370


>UNIPROTKB|D6RAT4 [details] [associations]
            symbol:CNBP "Cellular nucleic acid-binding protein"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10
            SUPFAM:SSF57756 EMBL:AC108673 EMBL:AC135587 HGNC:HGNC:13164
            ChiTaRS:CNBP IPI:IPI00965541 ProteinModelPortal:D6RAT4 SMR:D6RAT4
            Ensembl:ENST00000512338 ArrayExpress:D6RAT4 Bgee:D6RAT4
            Uniprot:D6RAT4
        Length = 114

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query:    11 CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHIARDC 69
             C  CG++GH AR+C T    GG  R   +  + G      +    C  C ++GH+A+DC
Sbjct:     6 CFKCGRSGHWARECPT---GGGRGRGMRSRGRGGFQFVSSSLPDICYRCGESGHLAKDC 61


>UNIPROTKB|F1MUH8 [details] [associations]
            symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
            7" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
            GO:GO:0008270 GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 IPI:IPI00700472 OMA:EAQIANN
            EMBL:DAAA02023167 EMBL:DAAA02023168 EMBL:DAAA02023169
            EMBL:DAAA02023170 EMBL:DAAA02023171 EMBL:DAAA02023172
            EMBL:DAAA02023173 EMBL:DAAA02023174 Ensembl:ENSBTAT00000028791
            Uniprot:F1MUH8
        Length = 546

 Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query:   120 YVGYHDVICRSCNQMGHMSRDCVGPLII--CRNCGGRGHMAYECPS 163
             Y    +V CR+C++ GH+S++C  P  +  C  C  RGH+ Y CP+
Sbjct:   235 YTANKNVTCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA 280

 Score = 89 (36.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
 Identities = 23/89 (25%), Positives = 38/89 (42%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C  C      
Sbjct:   238 NKNVTCRNCDKCGHLSKNCPFPQK----VRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
                C         C+ C++ GH A  CP+
Sbjct:   293 THRCLERASWRKRCDRCDMIGHYADACPE 321

 Score = 65 (27.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NCG  GH  +EC   R+ ++ +
Sbjct:   347 LVYCYNCGQEGHYGHECTERRMFNQTF 373


>UNIPROTKB|Q2KIN0 [details] [associations]
            symbol:ZCCHC7 "Zinc finger CCHC domain-containing protein
            7" species:9913 "Bos taurus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 eggNOG:COG5082
            Gene3D:4.10.60.10 SUPFAM:SSF57756 KO:K12597 EMBL:BC112578
            IPI:IPI00700472 RefSeq:NP_001039565.1 UniGene:Bt.21210
            GeneID:511821 KEGG:bta:511821 CTD:84186 HOGENOM:HOG000155768
            InParanoid:Q2KIN0 OrthoDB:EOG4P5KBB NextBio:20870113 Uniprot:Q2KIN0
        Length = 546

 Score = 107 (42.7 bits), Expect = 0.00012, P = 0.00012
 Identities = 18/46 (39%), Positives = 28/46 (60%)

Query:   120 YVGYHDVICRSCNQMGHMSRDCVGPLII--CRNCGGRGHMAYECPS 163
             Y    +V CR+C++ GH+S++C  P  +  C  C  RGH+ Y CP+
Sbjct:   235 YTANKNVTCRNCDKCGHLSKNCPFPQKVRPCCLCSERGHLQYACPA 280

 Score = 89 (36.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
 Identities = 23/89 (25%), Positives = 38/89 (42%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTGHI 65
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C  C      
Sbjct:   238 NKNVTCRNCDKCGHLSKNCPFPQK----VRPCCLCSERGHLQYACPA-RFCLGCSLPMSS 292

Query:    66 ARDCQNEPV----CNLCNIAGHVARQCPK 90
                C         C+ C++ GH A  CP+
Sbjct:   293 THRCLERASWRKRCDRCDMIGHYADACPE 321

 Score = 65 (27.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NCG  GH  +EC   R+ ++ +
Sbjct:   347 LVYCYNCGQEGHYGHECTERRMFNQTF 373


>MGI|MGI:2442912 [details] [associations]
            symbol:Zcchc7 "zinc finger, CCHC domain containing 7"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158
            SMART:SM00343 MGI:MGI:2442912 GO:GO:0005737 GO:GO:0005730
            GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 EMBL:CH466565
            eggNOG:COG5082 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GeneTree:ENSGT00510000048226 KO:K12597 CTD:84186
            HOGENOM:HOG000155768 OrthoDB:EOG4P5KBB OMA:EAQIANN EMBL:AK013175
            EMBL:AK043238 EMBL:AK050430 EMBL:AK157728 EMBL:AL805896
            EMBL:AL805914 EMBL:BC054405 EMBL:BC117020 EMBL:BC117022
            EMBL:BC144774 IPI:IPI00112298 IPI:IPI00227238 RefSeq:NP_613056.2
            UniGene:Mm.331576 UniGene:Mm.486647 ProteinModelPortal:B1AX39
            SMR:B1AX39 STRING:B1AX39 PhosphoSite:B1AX39 PRIDE:B1AX39
            Ensembl:ENSMUST00000107824 Ensembl:ENSMUST00000147272 GeneID:319885
            KEGG:mmu:319885 UCSC:uc008sry.2 UCSC:uc008ssa.2 InParanoid:B1AX39
            ChiTaRS:ZCCHC7 NextBio:395583 Bgee:B1AX39 Genevestigator:B1AX39
            Uniprot:B1AX39
        Length = 541

 Score = 89 (36.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 23/89 (25%), Positives = 42/89 (47%)

Query:     7 NEGI-CHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCR---KT 62
             N+ + C +C K GH +++C    +    +R C  C + GH+   C   + C +C     +
Sbjct:   233 NKNVTCRNCDKRGHLSKNCPLPQK----VRACCLCSERGHLQYGCPA-RYCLDCSLPMSS 287

Query:    63 GHIARDCQN-EPVCNLCNIAGHVARQCPK 90
              H   +  +    C+ C++ GH A  CP+
Sbjct:   288 NHRCFERLSWRKRCDRCDMIGHHADACPE 316

 Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query:   145 LIICRNCGGRGHMAYECPSGRIADRGY 171
             L+ C NC  +GH  +EC   R+ ++ +
Sbjct:   342 LVYCYNCAQKGHYGHECTERRMFNQTF 368


>TAIR|locus:2057295 [details] [associations]
            symbol:AT2G12880 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001878 Pfam:PF00098 PROSITE:PS50158 SMART:SM00343
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0003676 Gene3D:4.10.60.10 SUPFAM:SSF57756 EMBL:AC006437
            EMBL:AC007155 IPI:IPI00547403 PIR:C84504 RefSeq:NP_178944.1
            UniGene:At.52721 ProteinModelPortal:Q9SKG2 SMR:Q9SKG2 PRIDE:Q9SKG2
            EnsemblPlants:AT2G12880.1 GeneID:815767 KEGG:ath:AT2G12880
            TAIR:At2g12880 eggNOG:KOG4400 InParanoid:Q9SKG2 PhylomeDB:Q9SKG2
            ArrayExpress:Q9SKG2 Genevestigator:Q9SKG2 Uniprot:Q9SKG2
        Length = 119

 Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 20/61 (32%), Positives = 25/61 (40%)

Query:     4 NCHNEGICHSCGKTGHRARDCSTHVQSGGDLRLCNNCYKPGHIAADCTNDKACKNCRKTG 63
             N ++   C+ CGK GH AR C    Q       C  C + GH +  C N K        G
Sbjct:    29 NDYDPRACYKCGKLGHFARSCHVVTQPTTAYITCYFCSEEGHRSNGCPN-KRTDQVNPKG 87

Query:    64 H 64
             H
Sbjct:    88 H 88


>TAIR|locus:2083936 [details] [associations]
            symbol:RS2Z32 "arginine/serine-rich zinc
            knuckle-containing protein 32" species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=RCA;TAS] [GO:0008380 "RNA
            splicing" evidence=NAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0030422 "production of siRNA
            involved in RNA interference" evidence=RCA] [GO:0035196 "production
            of miRNAs involved in gene silencing by miRNA" evidence=RCA]
            [GO:0043687 "post-translational protein modification" evidence=RCA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=RCA] InterPro:IPR000504 InterPro:IPR001878
            InterPro:IPR012677 Pfam:PF00076 Pfam:PF00098 PROSITE:PS50102
            PROSITE:PS50158 SMART:SM00343 SMART:SM00360 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000166 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AL132966
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0000398 HSSP:P52298
            HOGENOM:HOG000276234 KO:K12896 EMBL:AY095996 EMBL:BT001034
            EMBL:AK316697 IPI:IPI00525747 PIR:F84791 PIR:T45890
            RefSeq:NP_190918.3 RefSeq:NP_851015.1 UniGene:At.26777
            ProteinModelPortal:Q9FYB7 SMR:Q9FYB7 STRING:Q9FYB7 PRIDE:Q9FYB7
            EnsemblPlants:AT3G53500.2 GeneID:824518 KEGG:ath:AT3G53500
            TAIR:At3g53500 InParanoid:Q9FYB7 OMA:GSPKENG PhylomeDB:Q9FYB7
            ProtClustDB:CLSN2680397 Genevestigator:Q9FYB7 Uniprot:Q9FYB7
        Length = 284

 Score = 103 (41.3 bits), Expect = 0.00035, P = 0.00035
 Identities = 23/60 (38%), Positives = 31/60 (51%)

Query:     9 GICHSCGKTGHRARDCSTHVQSGGDLR-LCNNCYKPGHIAADCTNDKACKNCRKTGHIAR 67
             G C +CG  GH ARDC+      GD +  C  C + GHI  +C N  + K  R+ G  +R
Sbjct:    99 GRCFNCGVDGHWARDCTA-----GDWKNKCYRCGERGHIERNCKNSPSPKKARQGGSYSR 153


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.140   0.497    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       149   0.00078  104 3  12 22  0.42    31
                                                     30  0.39    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  68
  No. of states in DFA:  514 (55 KB)
  Total size of DFA:  126 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.50u 0.20s 11.70t   Elapsed:  00:00:01
  Total cpu time:  11.51u 0.20s 11.71t   Elapsed:  00:00:01
  Start:  Sat May 11 07:17:24 2013   End:  Sat May 11 07:17:25 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with AT1G75560 AT1G75560 AT1G75560	protein from Arabidopsis thaliana	2.6e-57
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Translational activator for mRNAs with internal ribosome entry sites	gene from Saccharomyces cerevisiae	4.4e-25
BLAST match view associations BLAST with CNBP CNBP CNBP cDNA FLJ61146, highly similar to Cellular nucleic acid-binding protein	protein from Homo sapiens	6.0e-22
BLAST match view associations BLAST with cnbpb cnbpb cnbpb CCHC-type zinc finger, nucleic acid binding protein b	gene_product from Danio rerio	1.2e-21
BLAST match view associations BLAST with CNBP CNBP CNBP Uncharacterized protein	protein from Canis lupus familiaris	1.6e-21
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	1.1e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp cellular nucleic acid binding protein	protein from Mus musculus	1.7e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	2.2e-20
BLAST match view associations BLAST with Q4R501 Q4R501 Q4R501 Brain cDNA, clone: QnpA-14556, similar to human zinc finger protein 9 (a cellular retroviral nucleicacid binding protein) (ZNF9),	protein from Macaca fascicularis	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Pongo abelii	2.2e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp CCHC-type zinc finger, nucleic acid binding protein	gene from Rattus norvegicus	2.2e-20
BLAST match view associations BLAST with Cnbp Cnbp Cnbp Cellular nucleic acid-binding protein	protein from Rattus norvegicus	2.2e-20
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Bos taurus	2.2e-20
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Bos taurus	3.6e-20
BLAST match view associations BLAST with cnbpa cnbpa cnbpa CCHC-type zinc finger, nucleic acid binding protein a	gene_product from Danio rerio	3.6e-20
BLAST match view associations BLAST with MGG_05948 MGG_05948 MGG_05948 Zinc knuckle domain-containing protein	protein from Magnaporthe oryzae 70-15	5.8e-20
BLAST match view associations BLAST with GIS2 GIS2 GIS2	gene_product from Candida albicans	5.0e-19
BLAST match view associations BLAST with GIS2 GIS2 GIS2 Putative uncharacterized protein GIS2	protein from Candida albicans SC5314	5.0e-19
BLAST match view associations BLAST with MGG_13778 MGG_13778 MGG_13778 Zinc finger protein GIS2	protein from Magnaporthe oryzae 70-15	2.7e-18
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Gallus gallus	3.7e-17
BLAST match view associations BLAST with DDB_G0293328 DDB_G0293328 DDB_G0293328 Cellular nucleic acid-binding protein	gene from Dictyostelium discoideum	6.0e-17
BLAST match view associations BLAST with CG3800 CG3800 CG3800	protein from Drosophila melanogaster	3.2e-16
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Uncharacterized protein	protein from Canis lupus familiaris	6.6e-16
BLAST match view associations BLAST with CSDP1 CSDP1 CSDP1 AT4G36020	protein from Arabidopsis thaliana	3.0e-15
BLAST match view associations BLAST with glh-4 glh-4 glh-4	gene from Caenorhabditis elegans	5.3e-15
BLAST match view associations BLAST with ZCCHC13 ZCCHC13 ZCCHC13 Zinc finger CCHC domain-containing protein 13	protein from Homo sapiens	5.7e-15
BLAST match view associations BLAST with glh-2 glh-2 glh-2	gene from Caenorhabditis elegans	3.4e-14
BLAST match view associations BLAST with glh-2 glh-2 glh-2 ATP-dependent RNA helicase glh-2	protein from Caenorhabditis elegans	3.4e-14
BLAST match view associations BLAST with CSP3 CSP3 CSP3 AT2G17870	protein from Arabidopsis thaliana	9.6e-13
BLAST match view associations BLAST with AT3G43590 AT3G43590 AT3G43590	protein from Arabidopsis thaliana	9.8e-12
BLAST match view associations BLAST with zcchc7 zcchc7 zcchc7 zinc finger, CCHC domain containing 7	gene_product from Danio rerio	1.6e-11
BLAST match view associations BLAST with K08D12.3 K08D12.3 K08D12.3	gene from Caenorhabditis elegans	1.9e-11
BLAST match view associations BLAST with AIR2 AIR2 AIR2 RNA-binding subunit of the TRAMP nuclear RNA surveillance complex	gene from Saccharomyces cerevisiae	1.4e-10
BLAST match view associations BLAST with glh-1 glh-1 glh-1	gene from Caenorhabditis elegans	2.4e-10
BLAST match view associations BLAST with glh-1 glh-1 glh-1 ATP-dependent RNA helicase glh-1	protein from Caenorhabditis elegans	2.4e-10
BLAST match view associations BLAST with AIR1 AIR1 AIR1 Zinc knuckle protein	gene from Saccharomyces cerevisiae	5.1e-10
BLAST match view associations BLAST with orf19.4844 orf19.4844 orf19.4844	gene_product from Candida albicans	8.5e-09
BLAST match view associations BLAST with P0016H04.11 P0016H04.11 P0016H04.11 Putative uncharacterized protein P0016H04.11	protein from Oryza sativa Japonica Group	1.2e-08
BLAST match view associations BLAST with MGG_09256 MGG_09256 MGG_09256 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.3e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Canis lupus familiaris	3.8e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Sus scrofa	8.3e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Uncharacterized protein	protein from Bos taurus	8.4e-08
BLAST match view associations BLAST with ZCCHC3 ZCCHC3 ZCCHC3 Zinc finger CCHC domain-containing protein 3	protein from Homo sapiens	8.4e-08
BLAST match view associations BLAST with Zcchc3 Zcchc3 Zcchc3 zinc finger, CCHC domain containing 3	gene from Rattus norvegicus	1.1e-07
BLAST match view associations BLAST with AT5G52380 AT5G52380 AT5G52380	protein from Arabidopsis thaliana	1.6e-07
BLAST match view associations BLAST with AT3G42860 AT3G42860 AT3G42860	protein from Arabidopsis thaliana	2.0e-07
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Uncharacterized protein	protein from Sus scrofa	2.2e-07
BLAST match view associations BLAST with F07E5.5 F07E5.5 F07E5.5	gene from Caenorhabditis elegans	7.3e-07
BLAST match view associations BLAST with F40F12.9 F40F12.9 F40F12.9	gene from Caenorhabditis elegans	5.5e-06
BLAST match view associations BLAST with gag gag gag Gag polyprotein	protein from Equine infectious anemia virus (CLONE 1369)	1.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Uncharacterized protein	protein from Canis lupus familiaris	2.2e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Homo sapiens	2.5e-05
BLAST match view associations BLAST with AT5G36240 AT5G36240 AT5G36240	protein from Arabidopsis thaliana	2.8e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 Zinc finger CCHC domain-containing protein 7	protein from Rattus norvegicus	4.0e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	gene from Rattus norvegicus	4.7e-05
BLAST match view associations BLAST with CNBP CNBP CNBP Cellular nucleic acid-binding protein	protein from Homo sapiens	5.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with ZCCHC7 ZCCHC7 ZCCHC7 Zinc finger CCHC domain-containing protein 7	protein from Bos taurus	6.0e-05
BLAST match view associations BLAST with Zcchc7 Zcchc7 Zcchc7 zinc finger, CCHC domain containing 7	protein from Mus musculus	0.00015
BLAST match view associations BLAST with AT2G12880 AT2G12880 AT2G12880	protein from Arabidopsis thaliana	0.00035
BLAST match view associations BLAST with RS2Z32 RS2Z32 RS2Z32 AT3G53500	protein from Arabidopsis thaliana	0.00035