Your job contains 1 sequence.
>030605
MLSSMALQSTVNGAFTTRSSFPSQKLTVKPTKTTILHQNRTKPISRNQRLVALATPESLT
AEEATTTSTETIPATPVETKKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQSIPGYGTIP
LSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNLTT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030605
(174 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026940 - symbol:PSRP3/1 "plastid-specifi... 454 5.7e-43 1
TAIR|locus:2143211 - symbol:PSRP3/2 "plastid-specifi... 387 3.2e-41 2
>TAIR|locus:2026940 [details] [associations]
symbol:PSRP3/1 "plastid-specific ribosomal protein
3/1" species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0032544 "plastid
translation" evidence=IMP] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
biosynthetic process, mevalonate-independent pathway" evidence=RCA]
InterPro:IPR006924 Pfam:PF04839 ProDom:PD015453 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0005840 GO:GO:0003735
EMBL:AC008075 GO:GO:0009535 UniGene:At.35504 GO:GO:0032544
EMBL:BT003990 EMBL:BT005090 EMBL:AY086145 IPI:IPI00543358
PIR:C96710 RefSeq:NP_564934.1 UniGene:At.71121
ProteinModelPortal:Q9SX22 SMR:Q9SX22 IntAct:Q9SX22 STRING:Q9SX22
PaxDb:Q9SX22 PRIDE:Q9SX22 ProMEX:Q9SX22 EnsemblPlants:AT1G68590.1
GeneID:843189 KEGG:ath:AT1G68590 TAIR:At1g68590 eggNOG:NOG28579
HOGENOM:HOG000240847 InParanoid:Q9SX22 OMA:LEAKPWI PhylomeDB:Q9SX22
ProtClustDB:CLSN2687486 Genevestigator:Q9SX22 GermOnline:AT1G68590
Uniprot:Q9SX22
Length = 166
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 97/175 (55%), Positives = 114/175 (65%)
Query: 1 MLSSMALQST-VNGAFTTRSSFPSQKLTVKPTKTTILHQNRTKPISRNQRLVXXXXXXXX 59
M+SSMAL ST + +F S P +T P + H TKPIS ++++
Sbjct: 1 MMSSMALSSTSLCSSFI--SQHPKLSITASPP---LFHTQTTKPISVKRKIITLAAPETL 55
Query: 60 XXXXXXXXXXXXXXXXPVETKKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQSIPGYGTI 119
P +T K VK EK R+VLKF+WMEKNIGL LDQ +PG+GTI
Sbjct: 56 TAETVTGIDTSDNT--PQQTIKV---VKPDEKSRVVLKFVWMEKNIGLGLDQHVPGHGTI 110
Query: 120 PLSQYFFWPRKDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNLTT 174
PLS YFFWPRKDAWEELK+TLE+KPWISQK MIILLNQATDIINLWQQSGGNLT+
Sbjct: 111 PLSPYFFWPRKDAWEELKSTLEAKPWISQKKMIILLNQATDIINLWQQSGGNLTS 165
>TAIR|locus:2143211 [details] [associations]
symbol:PSRP3/2 "plastid-specific ribosomal protein
3/2" species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009536 "plastid" evidence=IEA]
InterPro:IPR006924 Pfam:PF04839 ProDom:PD015453 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AL391144 eggNOG:NOG28579 HOGENOM:HOG000240847
ProtClustDB:CLSN2687486 EMBL:AK117858 EMBL:BT003711 IPI:IPI00538512
PIR:T51405 RefSeq:NP_197080.1 UniGene:At.66680
ProteinModelPortal:Q9LFV0 SMR:Q9LFV0 STRING:Q9LFV0 PaxDb:Q9LFV0
PRIDE:Q9LFV0 EnsemblPlants:AT5G15760.1 GeneID:831432
KEGG:ath:AT5G15760 TAIR:At5g15760 InParanoid:Q9LFV0 OMA:WISELHR
PhylomeDB:Q9LFV0 Genevestigator:Q9LFV0 GermOnline:AT5G15760
Uniprot:Q9LFV0
Length = 183
Score = 387 (141.3 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 70/98 (71%), Positives = 83/98 (84%)
Query: 76 PVETKKAGVSVKQLEKPRLVLKFIWMEKNIGLALDQSIPGYGTIPLSQYFFWPRKDAWEE 135
P+ KK V VK LEKP++VLKF+WM+K+IG+ALD IPG+GTIPLS Y+FWPRKDAWEE
Sbjct: 86 PLGKKKMRVLVKPLEKPKVVLKFVWMQKDIGVALDHMIPGFGTIPLSPYYFWPRKDAWEE 145
Query: 136 LKTTLESKPWISQKMMIILLNQATDIINLWQQSGGNLT 173
LKT LESKPWIS+ + LLNQATDIINLWQ SGG+L+
Sbjct: 146 LKTLLESKPWISELHRVFLLNQATDIINLWQSSGGDLS 183
Score = 67 (28.6 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 5 MALQSTVNGAFTTRSSFPSQKLTVKPTKTTILHQNRTKPISR 46
MA+Q+ + +F R++ PSQKL+ KP L + KP SR
Sbjct: 1 MAVQANQSASFGFRTASPSQKLSSKPIAHISL-STKLKPSSR 41
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 174 150 0.00087 104 3 11 22 0.49 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 575 (61 KB)
Total size of DFA: 141 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.46u 0.09s 12.55t Elapsed: 00:00:02
Total cpu time: 12.46u 0.09s 12.55t Elapsed: 00:00:02
Start: Sat May 11 07:21:10 2013 End: Sat May 11 07:21:12 2013