Query 030605
Match_columns 174
No_of_seqs 73 out of 75
Neff 2.6
Searched_HMMs 13730
Date Tue Mar 26 02:38:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030605.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030605hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1nkpa_ a.38.1.1 (A:) Myc prot 54.0 4.2 0.00031 26.4 2.7 39 130-168 22-60 (88)
2 d1dlca3 f.1.3.1 (A:61-289) del 49.6 2.5 0.00018 32.0 1.0 44 125-168 38-93 (229)
3 d1wzda1 a.132.1.1 (A:7-213) He 36.8 29 0.0021 24.6 5.2 44 122-166 152-199 (207)
4 d2o3la1 a.69.4.1 (A:14-95) Hyp 36.5 21 0.0015 23.6 4.1 41 131-171 18-58 (82)
5 d1nkpb_ a.38.1.1 (B:) Max prot 32.1 14 0.001 23.5 2.5 38 130-168 18-55 (83)
6 d1nlwa_ a.38.1.1 (A:) Mad prot 30.6 17 0.0012 22.8 2.7 38 131-168 18-55 (79)
7 d2o4ta1 a.69.4.1 (A:16-105) Un 29.7 32 0.0024 22.9 4.2 41 131-171 14-54 (90)
8 d1mdya_ a.38.1.1 (A:) Myod B/H 27.1 25 0.0018 21.9 3.0 38 130-168 28-65 (68)
9 d1fyva_ c.23.2.1 (A:) Toll-lik 26.2 15 0.0011 25.5 1.9 21 123-143 130-155 (161)
10 d1iv0a_ c.55.3.8 (A:) Hypothet 20.4 39 0.0028 22.2 3.1 27 98-125 6-32 (98)
No 1
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.03 E-value=4.2 Score=26.38 Aligned_cols=39 Identities=18% Similarity=0.169 Sum_probs=28.7
Q ss_pred CchHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhc
Q 030605 130 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 168 (174)
Q Consensus 130 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 168 (174)
+|+.++|+..|-.-+==....+..||+.|.+-|++.|+.
T Consensus 22 n~~f~~Lr~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~ 60 (88)
T d1nkpa_ 22 KRSFFALRDQIPELENNEKAPKVVILKKATAYILSVQAE 60 (88)
T ss_dssp HHHHHHHHTTCGGGTTCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 467888988874321112357999999999999998874
No 2
>d1dlca3 f.1.3.1 (A:61-289) delta-Endotoxin (insectocide), N-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=49.60 E-value=2.5 Score=32.05 Aligned_cols=44 Identities=18% Similarity=0.462 Sum_probs=27.7
Q ss_pred ccccCCchHHHHHHhhccC--CCCChhhHHHH----------HHhHHHHHHHHHhc
Q 030605 125 FFWPRKDAWEELKTTLESK--PWISQKMMIIL----------LNQATDIINLWQQS 168 (174)
Q Consensus 125 fFWPr~DAWEeLK~eLEsK--~WIs~~e~i~l----------LNq~TeIINyWQe~ 168 (174)
+|||.+|-|+++....|.- .=|++..+-.+ ++.+.+.++-|++.
T Consensus 38 ~lwP~~~~w~~~~~~ve~lId~~i~~~~~~~~~~~l~gL~~~l~~Y~~al~~w~~n 93 (229)
T d1dlca3 38 TIWPSEDPWKAFMEQVEALMDQKIADYAKNKALAELQGLQNNVEDYVSALSSWQKN 93 (229)
T ss_dssp HTSSSHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4599999999999888752 22455544333 33444556667654
No 3
>d1wzda1 a.132.1.1 (A:7-213) Heme oxygenase HmuO {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=36.83 E-value=29 Score=24.57 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=34.5
Q ss_pred cccccccCC-c---hHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHH
Q 030605 122 SQYFFWPRK-D---AWEELKTTLESKPWISQKMMIILLNQATDIINLWQ 166 (174)
Q Consensus 122 T~YfFWPr~-D---AWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQ 166 (174)
+.||+++.. | -|+.+|..|+.-. .++.++-.++..+.....+..
T Consensus 152 ~~fy~f~~~~~~~~~k~~~r~~l~~~~-~~~~~~~~ii~eA~~aF~~~~ 199 (207)
T d1wzda1 152 LGFYHFEGIAKLKVYKDEYREKLNNLE-LSDEQREHLLKEATDAFVFNH 199 (207)
T ss_dssp CGGGCCTTCSCHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCcCCHHHHHHHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH
Confidence 457777764 3 2899999999876 678899999999988877654
No 4
>d2o3la1 a.69.4.1 (A:14-95) Hypothetical protein BCE3448 {Bacillus cereus [TaxId: 1396]}
Probab=36.55 E-value=21 Score=23.65 Aligned_cols=41 Identities=7% Similarity=0.029 Sum_probs=34.7
Q ss_pred chHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhcCCC
Q 030605 131 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGN 171 (174)
Q Consensus 131 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~~~~ 171 (174)
-+|++|+.+|=...=+++.+...||+.+.+.+---|..|++
T Consensus 18 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~l~eea~~~G~~ 58 (82)
T d2o3la1 18 FVFKKIQNYMWNFSAGNGMDMLHIQYELIDLFEAGAAEGRQ 58 (82)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 48999999995555568999999999999999888888865
No 5
>d1nkpb_ a.38.1.1 (B:) Max protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.13 E-value=14 Score=23.47 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=28.9
Q ss_pred CchHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhc
Q 030605 130 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 168 (174)
Q Consensus 130 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 168 (174)
++++++|+..|.+-+ -...+++.||..|.+.|.+.|+.
T Consensus 18 n~~f~~L~~llP~~~-~~k~sK~~iL~~A~~yI~~L~~~ 55 (83)
T d1nkpb_ 18 KDSFHSLRDSVPSLQ-GEKASRAQILDKATEYIQYMRRK 55 (83)
T ss_dssp HHHHHHHHTTSGGGT-TSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999886422 12458999999999999988764
No 6
>d1nlwa_ a.38.1.1 (A:) Mad protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.62 E-value=17 Score=22.85 Aligned_cols=38 Identities=26% Similarity=0.194 Sum_probs=27.4
Q ss_pred chHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhc
Q 030605 131 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 168 (174)
Q Consensus 131 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 168 (174)
++-++|+..|-.-+=-....+..||+.|++-|.+=|+.
T Consensus 18 ~~f~~L~~llP~~~~~~k~sK~~iL~~A~~yI~~L~~~ 55 (79)
T d1nlwa_ 18 LSLEKLKGLVPLGPDSSRHTTLSLLTKAKLHIKKLEDS 55 (79)
T ss_dssp HHHHHHHHSSCCCSSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCccCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 56677888774322223457899999999999987764
No 7
>d2o4ta1 a.69.4.1 (A:16-105) Uncharacterized protein BH3976 {Bacillus halodurans [TaxId: 86665]}
Probab=29.70 E-value=32 Score=22.93 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=34.4
Q ss_pred chHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhcCCC
Q 030605 131 DAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQSGGN 171 (174)
Q Consensus 131 DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~~~~ 171 (174)
-+|++|..+|-...=++..+...||+.+.+.+--.|..|+.
T Consensus 14 ~~y~~i~~YL~~~~~~~~~~~~~il~dil~lleea~~~G~~ 54 (90)
T d2o4ta1 14 IVYKEIQKYLFKVGPVELNEGIGLLSEILGFFEEGAAAGKG 54 (90)
T ss_dssp HHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 47999999995554448999999999999999888888865
No 8
>d1mdya_ a.38.1.1 (A:) Myod B/HLH domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.12 E-value=25 Score=21.87 Aligned_cols=38 Identities=26% Similarity=0.293 Sum_probs=29.2
Q ss_pred CchHHHHHHhhccCCCCChhhHHHHHHhHHHHHHHHHhc
Q 030605 130 KDAWEELKTTLESKPWISQKMMIILLNQATDIINLWQQS 168 (174)
Q Consensus 130 ~DAWEeLK~eLEsK~WIs~~e~i~lLNq~TeIINyWQe~ 168 (174)
+++.+.|+..|-+-+ -..-++..+|..|.+-|.+=|+.
T Consensus 28 n~~~~~L~~llP~~~-~~k~sK~~iL~~Ai~YI~~Lq~~ 65 (68)
T d1mdya_ 28 NEAFETLKRSTSSNP-NQRLPKVEILRNAIRYIEGLQAL 65 (68)
T ss_dssp HHHHHHHHTTSCSCT-TSCCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 467889998886543 23448999999999999887763
No 9
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.19 E-value=15 Score=25.45 Aligned_cols=21 Identities=29% Similarity=0.972 Sum_probs=17.4
Q ss_pred ccccccCCch-----HHHHHHhhccC
Q 030605 123 QYFFWPRKDA-----WEELKTTLESK 143 (174)
Q Consensus 123 ~YfFWPr~DA-----WEeLK~eLEsK 143 (174)
+|.-||+.+. |++|+..|..|
T Consensus 130 ~~l~W~~~~~~~~~FW~~L~~aL~~~ 155 (161)
T d1fyva_ 130 TYLEWPKEKSKRGLFWANLRAAINIK 155 (161)
T ss_dssp CCEECCSSGGGSSHHHHHHHHHHHSC
T ss_pred CeEeCCCCcchhHHHHHHHHHHCCCC
Confidence 5889998765 99999998765
No 10
>d1iv0a_ c.55.3.8 (A:) Hypothetical protein, YqgF homologue {Thermus thermophilus [TaxId: 274]}
Probab=20.43 E-value=39 Score=22.18 Aligned_cols=27 Identities=19% Similarity=-0.060 Sum_probs=20.2
Q ss_pred EEeecCceeEEeeeeecCCCCccccccc
Q 030605 98 FIWMEKNIGLALDQSIPGYGTIPLSQYF 125 (174)
Q Consensus 98 ~LWleknIgiAvDQ~v~g~~t~PLT~Yf 125 (174)
+=+-++.||||+=+-. +.-.+||..+.
T Consensus 6 lD~G~kriGiAisd~~-~~~a~pl~~i~ 32 (98)
T d1iv0a_ 6 LDVGEARIGLAVGEEG-VPLASGRGYLV 32 (98)
T ss_dssp EEESSSEEEEEEECSC-CSSCCCEEEEE
T ss_pred EEcCCCEEEEEEecCC-CCeEcceEEEE
Confidence 3356799999998776 66677887664
Done!