Query 030606
Match_columns 174
No_of_seqs 152 out of 1106
Neff 4.5
Searched_HMMs 46136
Date Fri Mar 29 16:17:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030606.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030606hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK14430 acylphosphatase; Prov 100.0 7.5E-33 1.6E-37 205.2 13.9 91 83-174 2-92 (92)
2 PRK14445 acylphosphatase; Prov 100.0 8.3E-33 1.8E-37 203.8 13.4 89 83-171 2-91 (91)
3 PRK14447 acylphosphatase; Prov 100.0 8.9E-33 1.9E-37 205.5 13.6 91 83-173 2-94 (95)
4 PRK14423 acylphosphatase; Prov 100.0 1.2E-32 2.6E-37 203.5 13.4 89 83-171 3-91 (92)
5 PRK14428 acylphosphatase; Prov 100.0 1.4E-32 3.1E-37 206.1 13.4 92 80-171 3-96 (97)
6 PRK14438 acylphosphatase; Prov 100.0 1.6E-32 3.4E-37 202.5 13.3 90 83-172 1-91 (91)
7 PRK14429 acylphosphatase; Prov 100.0 2.4E-32 5.1E-37 201.0 13.4 88 84-171 1-89 (90)
8 PRK14450 acylphosphatase; Prov 100.0 2.7E-32 5.9E-37 200.9 13.6 89 84-172 1-91 (91)
9 PRK14441 acylphosphatase; Prov 100.0 2.3E-32 5E-37 202.6 13.2 89 83-171 3-92 (93)
10 PRK14436 acylphosphatase; Prov 100.0 3.2E-32 6.9E-37 201.3 13.7 89 83-171 2-90 (91)
11 PRK14432 acylphosphatase; Prov 100.0 2.8E-32 6E-37 202.5 13.3 89 84-172 1-93 (93)
12 PRK14425 acylphosphatase; Prov 100.0 3.4E-32 7.4E-37 202.2 13.7 88 84-171 5-93 (94)
13 PRK14420 acylphosphatase; Prov 100.0 3.4E-32 7.4E-37 199.9 13.6 90 84-173 1-91 (91)
14 PRK14444 acylphosphatase; Prov 100.0 3.7E-32 8E-37 201.1 13.7 89 83-171 2-91 (92)
15 PRK14442 acylphosphatase; Prov 100.0 3.3E-32 7.2E-37 201.0 13.5 89 84-172 3-91 (91)
16 PRK14435 acylphosphatase; Prov 100.0 3.7E-32 8.1E-37 200.4 13.7 89 84-172 1-89 (90)
17 PRK14422 acylphosphatase; Prov 100.0 3.5E-32 7.6E-37 201.8 13.6 89 83-171 4-93 (93)
18 PRK14434 acylphosphatase; Prov 100.0 2.6E-32 5.7E-37 202.2 12.8 88 84-171 1-91 (92)
19 PRK14448 acylphosphatase; Prov 100.0 4E-32 8.6E-37 200.2 13.5 88 84-171 1-89 (90)
20 PRK14451 acylphosphatase; Prov 100.0 4.2E-32 9.2E-37 199.9 13.5 88 84-171 2-89 (89)
21 PRK14446 acylphosphatase; Prov 100.0 2.3E-32 5E-37 201.6 11.8 86 84-169 1-86 (88)
22 PF00708 Acylphosphatase: Acyl 100.0 2.1E-32 4.6E-37 199.5 11.3 88 84-171 3-91 (91)
23 PRK14427 acylphosphatase; Prov 100.0 6.7E-32 1.5E-36 200.6 14.0 91 82-172 3-94 (94)
24 PRK14437 acylphosphatase; Prov 100.0 6E-32 1.3E-36 206.4 13.8 90 82-171 20-109 (109)
25 PRK14433 acylphosphatase; Prov 100.0 6.1E-32 1.3E-36 198.3 12.9 86 86-171 2-87 (87)
26 PRK14440 acylphosphatase; Prov 100.0 7.8E-32 1.7E-36 198.8 13.5 88 83-170 1-89 (90)
27 PRK14421 acylphosphatase; Prov 100.0 8.7E-32 1.9E-36 202.5 13.7 92 83-174 2-99 (99)
28 PRK14426 acylphosphatase; Prov 100.0 1.3E-31 2.8E-36 198.0 13.7 88 84-171 3-92 (92)
29 PRK14449 acylphosphatase; Prov 100.0 1.4E-31 3.1E-36 196.9 13.6 88 84-171 2-90 (90)
30 PRK14424 acylphosphatase; Prov 100.0 3.5E-31 7.5E-36 197.4 13.7 89 82-170 4-93 (94)
31 PRK14452 acylphosphatase; Prov 100.0 3.3E-31 7.2E-36 201.9 13.5 90 83-172 18-107 (107)
32 COG1254 AcyP Acylphosphatases 100.0 4.2E-31 9.1E-36 196.8 13.6 90 83-172 2-92 (92)
33 PRK14443 acylphosphatase; Prov 100.0 2.8E-30 6E-35 192.4 13.7 89 84-172 3-93 (93)
34 PRK14431 acylphosphatase; Prov 100.0 3.2E-30 6.9E-35 190.1 12.7 85 84-169 1-87 (89)
35 PRK14439 acylphosphatase; Prov 100.0 7.6E-29 1.6E-33 201.2 13.0 88 84-171 74-163 (163)
36 COG0068 HypF Hydrogenase matur 99.9 9.2E-24 2E-28 201.0 7.6 86 87-173 1-87 (750)
37 KOG3360 Acylphosphatase [Energ 99.8 3.3E-20 7.1E-25 139.8 9.8 91 81-171 4-98 (98)
38 COG1054 Predicted sulfurtransf 95.0 0.12 2.6E-06 46.4 7.8 61 91-152 13-73 (308)
39 PF06544 DUF1115: Protein of u 94.8 0.1 2.3E-06 40.2 6.2 41 100-142 14-55 (128)
40 PRK01415 hypothetical protein; 94.6 0.19 4.1E-06 43.6 8.1 72 98-171 20-91 (247)
41 PRK05320 rhodanese superfamily 92.8 0.4 8.6E-06 41.4 6.8 54 99-153 19-72 (257)
42 TIGR01160 SUI1_MOF2 translatio 92.4 0.41 8.9E-06 37.1 5.8 54 90-143 43-97 (110)
43 PF04940 BLUF: Sensors of blue 92.0 1.2 2.6E-05 32.8 7.6 59 108-167 30-88 (93)
44 PF10369 ALS_ss_C: Small subun 90.4 0.86 1.9E-05 32.4 5.3 47 97-145 12-58 (75)
45 PF04350 PilO: Pilus assembly 85.3 8.6 0.00019 29.0 8.4 62 102-163 57-127 (144)
46 PF04612 T2SM: Type II secreti 80.8 11 0.00024 29.1 7.6 66 97-163 80-147 (160)
47 PRK07451 translation initiatio 77.4 10 0.00023 29.6 6.4 43 95-142 57-105 (115)
48 PF09383 NIL: NIL domain; Int 77.1 13 0.00028 25.6 6.3 59 85-146 3-69 (76)
49 CHL00100 ilvH acetohydroxyacid 77.0 7.1 0.00015 32.3 5.7 45 99-145 96-140 (174)
50 PRK11895 ilvH acetolactate syn 76.7 8.1 0.00018 31.5 5.9 44 100-145 97-140 (161)
51 PF10741 T2SM_b: Type II secre 76.0 9 0.0002 28.4 5.6 61 99-159 17-86 (110)
52 PF01253 SUI1: Translation ini 73.8 15 0.00033 26.2 6.1 50 90-139 22-73 (83)
53 TIGR00119 acolac_sm acetolacta 73.7 9.9 0.00021 30.8 5.6 44 100-145 96-139 (157)
54 TIGR01159 DRP1 density-regulat 70.0 13 0.00028 30.9 5.6 56 89-144 105-162 (173)
55 COG0023 SUI1 Translation initi 67.5 15 0.00032 28.4 5.1 43 95-142 50-93 (104)
56 cd00474 SUI1_eIF1 The SUI1/eIF 65.0 20 0.00044 25.7 5.2 47 90-141 17-65 (77)
57 TIGR01158 SUI1_rel translation 61.1 30 0.00065 26.1 5.6 38 100-142 53-91 (101)
58 PRK13011 formyltetrahydrofolat 59.1 48 0.001 29.1 7.4 63 93-155 59-122 (286)
59 PRK09019 translation initiatio 58.6 30 0.00064 26.8 5.3 43 95-142 50-98 (108)
60 PRK00939 translation initiatio 56.4 38 0.00081 25.6 5.5 42 96-142 48-90 (99)
61 PRK00142 putative rhodanese-re 55.6 84 0.0018 27.9 8.4 53 99-152 20-72 (314)
62 PRK06027 purU formyltetrahydro 53.1 54 0.0012 28.7 6.7 69 87-155 48-122 (286)
63 COG3790 Predicted membrane pro 52.6 3.2 6.9E-05 31.7 -0.9 12 92-103 60-71 (97)
64 PRK06824 translation initiatio 49.8 39 0.00084 26.5 4.8 43 95-142 60-108 (118)
65 PF12123 Amidase02_C: N-acetyl 48.2 66 0.0014 21.3 5.0 36 110-145 1-38 (45)
66 PF05798 Phage_FRD3: Bacteriop 48.1 33 0.00071 25.0 3.8 27 116-142 29-55 (75)
67 PF02641 DUF190: Uncharacteriz 46.4 1.2E+02 0.0026 22.4 9.8 63 94-156 15-99 (101)
68 PF14528 LAGLIDADG_3: LAGLIDAD 45.9 91 0.002 21.0 6.4 44 98-143 31-76 (77)
69 PRK13010 purU formyltetrahydro 44.6 1.1E+02 0.0025 26.9 7.4 58 98-155 68-126 (289)
70 PRK13562 acetolactate synthase 44.2 61 0.0013 24.1 4.8 62 97-158 14-80 (84)
71 PF05137 PilN: Fimbrial assemb 43.9 97 0.0021 20.7 8.4 69 105-173 4-77 (78)
72 PF09875 DUF2102: Uncharacteri 40.8 1.1E+02 0.0024 23.7 5.9 43 104-149 15-58 (104)
73 COG0440 IlvH Acetolactate synt 38.8 2E+02 0.0043 23.9 7.5 57 85-144 85-141 (163)
74 PF09600 Cyd_oper_YbgE: Cyd op 37.5 8 0.00017 28.5 -0.7 12 92-103 45-56 (82)
75 TIGR02112 cyd_oper_ybgE cyd op 35.8 7.3 0.00016 29.5 -1.2 12 92-103 56-67 (93)
76 cd04910 ACT_AK-Ectoine_1 ACT d 35.3 1.6E+02 0.0035 20.9 6.8 58 95-152 12-69 (71)
77 KOG1770 Translation initiation 34.8 2.2E+02 0.0049 22.3 7.8 56 86-142 29-98 (112)
78 COG0404 GcvT Glycine cleavage 34.4 3.4E+02 0.0074 25.0 9.1 85 86-171 111-206 (379)
79 PRK10588 hypothetical protein; 32.2 10 0.00022 29.0 -0.9 12 92-103 60-71 (97)
80 PLN02828 formyltetrahydrofolat 32.0 1.8E+02 0.004 25.5 6.7 59 99-157 43-105 (268)
81 KOG2769 Putative u4/u6 small n 31.0 70 0.0015 31.0 4.2 46 95-142 399-445 (522)
82 PRK06737 acetolactate synthase 29.8 1.2E+02 0.0025 21.9 4.3 57 97-153 14-74 (76)
83 PF13310 Virulence_RhuM: Virul 28.1 16 0.00034 32.4 -0.5 44 96-144 41-87 (260)
84 PRK06195 DNA polymerase III su 28.1 1.9E+02 0.004 25.3 6.1 47 83-132 220-266 (309)
85 COG0097 RplF Ribosomal protein 27.2 31 0.00066 28.9 1.0 51 94-145 88-150 (178)
86 TIGR00655 PurU formyltetrahydr 26.3 3.3E+02 0.0072 23.9 7.3 57 99-155 59-117 (280)
87 PF11623 DUF3252: Protein of u 26.3 76 0.0016 21.9 2.6 22 111-132 18-39 (53)
88 PF00381 PTS-HPr: PTS HPr comp 25.6 92 0.002 21.8 3.1 50 97-146 13-84 (84)
89 KOG2872 Uroporphyrinogen decar 25.5 92 0.002 28.7 3.8 86 56-145 259-355 (359)
90 TIGR01003 PTS_HPr_family Phosp 25.0 2.5E+02 0.0055 19.8 7.2 56 85-141 2-79 (82)
91 TIGR03272 methan_mark_6 putati 24.9 2.6E+02 0.0056 22.6 5.8 43 104-149 14-57 (132)
92 KOG2663 Acetolactate synthase, 24.1 1.9E+02 0.004 26.2 5.3 78 78-155 67-151 (309)
93 PF01336 tRNA_anti-codon: OB-f 23.6 1.2E+02 0.0026 19.6 3.3 18 93-110 27-44 (75)
94 COG1739 Uncharacterized conser 22.9 3.5E+02 0.0076 22.8 6.6 42 104-145 150-191 (203)
95 PF09186 DUF1949: Domain of un 22.8 2E+02 0.0044 17.9 4.5 41 104-145 11-51 (56)
96 PF15024 Glyco_transf_18: Glyc 22.5 2.3E+02 0.005 27.8 6.1 109 7-122 202-315 (559)
97 PTZ00027 60S ribosomal protein 22.4 38 0.00083 28.3 0.7 52 94-145 92-162 (190)
98 PF10882 bPH_5: Bacterial PH d 22.3 1.8E+02 0.0039 20.6 4.2 35 111-145 48-98 (100)
99 PF11211 DUF2997: Protein of u 21.6 1.9E+02 0.0042 19.0 3.8 28 117-144 3-31 (48)
100 PLN03014 carbonic anhydrase 21.6 1.1E+02 0.0023 28.4 3.4 27 102-128 296-324 (347)
101 PLN02154 carbonic anhydrase 21.2 1.1E+02 0.0024 27.5 3.4 27 102-128 242-270 (290)
102 PF06610 DUF1144: Protein of u 21.1 11 0.00024 30.7 -2.6 31 92-123 56-86 (143)
103 PF13098 Thioredoxin_2: Thiore 20.3 2.6E+02 0.0057 19.5 4.7 41 101-142 68-111 (112)
104 PF04428 Choline_kin_N: Cholin 20.1 71 0.0015 21.8 1.5 22 99-120 27-48 (53)
105 PRK15219 carbonic anhydrase; P 20.0 1.2E+02 0.0025 26.4 3.2 19 110-128 226-244 (245)
No 1
>PRK14430 acylphosphatase; Provisional
Probab=100.00 E-value=7.5e-33 Score=205.18 Aligned_cols=91 Identities=41% Similarity=0.607 Sum_probs=86.1
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|.+++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|++|++++.++
T Consensus 2 ~~~~~~i~v~G~VQGVGFR~~~~~~A~~lgl~G~VrN~~dGsVei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~ 81 (92)
T PRK14430 2 TKETWRLVAHGRVQGVGYRAACADAADDLGLGGWVRNRADGTVEVMASGTVRQLEALRAWMEAGPPAAQVTKVEVGPGAG 81 (92)
T ss_pred ceEEEEEEEEEeecceeeHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCceEEEEEEEEEcCC
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcEEeecC
Q 030606 163 DPGTGFVRKQTV 174 (174)
Q Consensus 163 ~~~~~FeIr~t~ 174 (174)
. .++|+|++|.
T Consensus 82 ~-~~~F~i~~~~ 92 (92)
T PRK14430 82 E-FAGFDLRPTA 92 (92)
T ss_pred C-CCCEEEEEcC
Confidence 5 4899999873
No 2
>PRK14445 acylphosphatase; Provisional
Probab=100.00 E-value=8.3e-33 Score=203.83 Aligned_cols=89 Identities=36% Similarity=0.519 Sum_probs=85.1
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
++++++++|+|+|||||||+|++++|+++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|++++.++.++
T Consensus 2 ~~~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~gP~~a~V~~i~~~~~~~ 81 (91)
T PRK14445 2 MEKRVHLIVSGLVQGVGFRMFIDRAASELNLSGWVRNLPDGTVEIEAQGSSGMIDELIKQAERGPSRSSVTSIMVEELEP 81 (91)
T ss_pred ccEEEEEEEEEEEcCcCChHHHHHHHhhCCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEEEEcCC
Confidence 57799999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +.+|+|+
T Consensus 82 ~~~~~~F~I~ 91 (91)
T PRK14445 82 DSSLKGFSII 91 (91)
T ss_pred CCCCCCEEEC
Confidence 76 5899985
No 3
>PRK14447 acylphosphatase; Provisional
Probab=100.00 E-value=8.9e-33 Score=205.47 Aligned_cols=91 Identities=34% Similarity=0.513 Sum_probs=86.8
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCC-cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDG-SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSN 161 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DG-sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e 161 (174)
.|+++++.|+|+|||||||+|++++|.++||+|||+|++|| +|+|++||++++|++|+++|+++|+.|+|+++++++.+
T Consensus 2 ~~~~~~~~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~~Vei~~qG~~~~l~~f~~~l~~gp~~a~V~~v~~~~~~ 81 (95)
T PRK14447 2 EMVRAHLFIRGKVQGVFFRQSMKEVANRNGVRGWVRNRSDGRTVEAVLEGPRDAVLKVIEWARVGPPGARVEDVEVKWEE 81 (95)
T ss_pred ccEEEEEEEEEecCCccchHHHHHHHhhcCeEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCeEEEEEEEEEcC
Confidence 57899999999999999999999999999999999999999 69999999999999999999999999999999999998
Q ss_pred CCC-CCCcEEeec
Q 030606 162 DDP-GTGFVRKQT 173 (174)
Q Consensus 162 ~~~-~~~FeIr~t 173 (174)
+.+ +++|+|++|
T Consensus 82 ~~~~~~~F~I~~s 94 (95)
T PRK14447 82 YKGEFQDFRILPT 94 (95)
T ss_pred CCCCCCCEEEEec
Confidence 766 689999975
No 4
>PRK14423 acylphosphatase; Provisional
Probab=100.00 E-value=1.2e-32 Score=203.52 Aligned_cols=89 Identities=42% Similarity=0.679 Sum_probs=85.6
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|++++++|+|+|||||||+|++++|.++||+|||+|+.||+|||++||++++|++|+++|+++|+.|+|+++++++.++
T Consensus 3 ~~~~~~i~v~G~VQGVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~ 82 (92)
T PRK14423 3 DRTRAHVFVSGRVQGVYYRASTRDTARELGVDGWVRNLDDGRVEAVFEGPRDAVEAMVEWCHEGSPAAVVEDVEVEYEEP 82 (92)
T ss_pred ccEEEEEEEEEecCCeeehHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHHhCCCceEEEEEEEEEcCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCcEEe
Q 030606 163 DPGTGFVRK 171 (174)
Q Consensus 163 ~~~~~FeIr 171 (174)
.++.+|+|+
T Consensus 83 ~~~~~F~I~ 91 (92)
T PRK14423 83 EGLDGFEIR 91 (92)
T ss_pred CCCCCeEEe
Confidence 777899996
No 5
>PRK14428 acylphosphatase; Provisional
Probab=100.00 E-value=1.4e-32 Score=206.13 Aligned_cols=92 Identities=36% Similarity=0.513 Sum_probs=86.9
Q ss_pred CCCCceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEE
Q 030606 80 QSPPAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFP 159 (174)
Q Consensus 80 ~~~~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~ 159 (174)
++..|.++++.|+|+|||||||+|++++|+++||+|||+|++||+|||++||+++++++|+++|+++|+.|+|+++++++
T Consensus 3 ~~~~~~~~~i~v~G~VQGVGFR~fv~~~A~~lgL~G~V~N~~dGsVei~~qG~~~~i~~fi~~l~~gP~~a~V~~v~~~~ 82 (97)
T PRK14428 3 QSANLVRKHIVVTGLVQGVGFRYFTVTQARRLGVQGWVRNCRDGSVELEAQGSSDAVQALVEQLAIGPRWSEVSHVAVHD 82 (97)
T ss_pred cchheEEEEEEEEEecCCccchHHHHHHHHHcCCEEEEEECCCCEEEEEEEcCHHHHHHHHHHHhhCCCccEEEEEEEEE
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCC--CCCCcEEe
Q 030606 160 SNDD--PGTGFVRK 171 (174)
Q Consensus 160 ~e~~--~~~~FeIr 171 (174)
.++. .+.+|+|+
T Consensus 83 ~~~~~~~~~~F~~~ 96 (97)
T PRK14428 83 MPIIDETARAFGVR 96 (97)
T ss_pred cCccccccCCceec
Confidence 9864 36799986
No 6
>PRK14438 acylphosphatase; Provisional
Probab=100.00 E-value=1.6e-32 Score=202.54 Aligned_cols=90 Identities=36% Similarity=0.517 Sum_probs=85.2
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
|.++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.++
T Consensus 1 ~~~~~~i~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~ 80 (91)
T PRK14438 1 MKIRAMVTVKGLVQGVAFRHHTQQTAQRLNVSGWVKNLPNGSVQGCFEGEETDVAALIDWCHHGPSRARVSGVIVEREEF 80 (91)
T ss_pred CcEEEEEEEEEecCCcCccHHHHHHHHHcCCEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEEEEEEEEEcCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCcEEee
Q 030606 163 DP-GTGFVRKQ 172 (174)
Q Consensus 163 ~~-~~~FeIr~ 172 (174)
.+ +++|+|++
T Consensus 81 ~~~~~~F~I~~ 91 (91)
T PRK14438 81 RGEFDDFDIRY 91 (91)
T ss_pred CCCCCCEEEeC
Confidence 76 58999974
No 7
>PRK14429 acylphosphatase; Provisional
Probab=100.00 E-value=2.4e-32 Score=201.04 Aligned_cols=88 Identities=33% Similarity=0.408 Sum_probs=84.1
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|+++++.|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.++.
T Consensus 1 m~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~i~~~~~~~~ 80 (90)
T PRK14429 1 MKRVLIKLTGKVQGVGCRRATLTKARALGVTGYVTNCEDGSVEILAQGSDPAVDNLIAWCEVGVPCTEVLRVTVEEDEAD 80 (90)
T ss_pred CeEEEEEEEEeecCeeeHHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEEEEEEEEEccCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred C-CCCcEEe
Q 030606 164 P-GTGFVRK 171 (174)
Q Consensus 164 ~-~~~FeIr 171 (174)
+ +.+|+|.
T Consensus 81 ~~~~~F~I~ 89 (90)
T PRK14429 81 EIYLDFSIV 89 (90)
T ss_pred CCCCCeEEe
Confidence 6 5899996
No 8
>PRK14450 acylphosphatase; Provisional
Probab=100.00 E-value=2.7e-32 Score=200.89 Aligned_cols=89 Identities=33% Similarity=0.515 Sum_probs=84.4
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCc-EEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGS-VEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGs-VEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
|++++++|+|+|||||||+|++++|.++||+|||+|++||+ |||++||+++++++|+++|+++|+.|+|++|+.++.++
T Consensus 1 ~~~~~~~v~G~VQGVGFR~~v~~~A~~~~l~G~V~N~~dG~~Vei~~~G~~~~v~~f~~~l~~gp~~a~V~~v~~~~~~~ 80 (91)
T PRK14450 1 MHCLKAIVKGKVQGVYFRDFTRTQATRLGLCGYAKNLANGNEVEVVAEGDKDSLLEFLDLLRSGPPRAEVKEVETSWETA 80 (91)
T ss_pred CEEEEEEEEEEecCcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEEeCHHHHHHHHHHHhhCCCCcEEEEEEEEEcCC
Confidence 67899999999999999999999999999999999999996 99999999999999999999999999999999998887
Q ss_pred CC-CCCcEEee
Q 030606 163 DP-GTGFVRKQ 172 (174)
Q Consensus 163 ~~-~~~FeIr~ 172 (174)
.+ +++|+|++
T Consensus 81 ~~~~~~F~I~~ 91 (91)
T PRK14450 81 TANYSDFRIKY 91 (91)
T ss_pred CCCCCCEEEeC
Confidence 66 58999974
No 9
>PRK14441 acylphosphatase; Provisional
Probab=100.00 E-value=2.3e-32 Score=202.57 Aligned_cols=89 Identities=36% Similarity=0.534 Sum_probs=85.6
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||+++.++.|+++|+++|+.|+|+++++++.++
T Consensus 3 ~~~~~~i~v~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~ 82 (93)
T PRK14441 3 DRVRARIVVSGRVQGVAFRQSAADEARRLGVEGWVRNLPDGRVEAEAEGERAAVGALVRWCHAGPPAARVDRVEVEWVEP 82 (93)
T ss_pred ccEEEEEEEEEecCCccchHHHHHHHhhcCcEEEEEECCCCEEEEEEEECHHHHHHHHHHHhhCCCCcEEEEEEEEEccC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +.+|+|+
T Consensus 83 ~~~~~~F~I~ 92 (93)
T PRK14441 83 AGDLGAFEIR 92 (93)
T ss_pred CCCCCCEEEe
Confidence 76 5899997
No 10
>PRK14436 acylphosphatase; Provisional
Probab=100.00 E-value=3.2e-32 Score=201.28 Aligned_cols=89 Identities=35% Similarity=0.487 Sum_probs=85.2
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|.+++++|+|+|||||||+|++++|.++||+|||+|+.||+|||++||++++|++|+++|+++|+.|+|+++++++.++
T Consensus 2 ~~~~~~i~v~G~VQGVGFR~~v~~~A~~l~l~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~ 81 (91)
T PRK14436 2 EIVRAHLRIYGRVQGVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAHQGPPLARVTRVEVKWEEP 81 (91)
T ss_pred ccEEEEEEEEEeeCCcCcHHHHHHHHHHcCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHhhCCCceEEEEEEEEEcCC
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCcEEe
Q 030606 163 DPGTGFVRK 171 (174)
Q Consensus 163 ~~~~~FeIr 171 (174)
.++.+|+|+
T Consensus 82 ~~~~~F~I~ 90 (91)
T PRK14436 82 KGEKGFRVV 90 (91)
T ss_pred CCCCCeEEc
Confidence 777899996
No 11
>PRK14432 acylphosphatase; Provisional
Probab=100.00 E-value=2.8e-32 Score=202.47 Aligned_cols=89 Identities=24% Similarity=0.325 Sum_probs=84.5
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEE-cCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFS-GNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~ae-G~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
|.+++++|+|+|||||||+|++++|.++||+|||+|++||+|||++| |+++++++|+++|+++|+.|+|++++.+++++
T Consensus 1 m~~~~~~v~G~VQGVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~~G~~~~v~~f~~~l~~gp~~a~V~~v~~~~~~~ 80 (93)
T PRK14432 1 MYKQQYFISGKVQGVGFRFFTEQIANNMKLKGFVKNLNDGRVEIVAFFNTKEQMKKFEKLLKNGNKYSNIENIEKKVLDE 80 (93)
T ss_pred CeEEEEEEEEeecCeeehHHHHHHHHHhCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHhCCCccEEEEEEEEECCC
Confidence 57899999999999999999999999999999999999999999998 99999999999999999999999999999886
Q ss_pred C---CCCCcEEee
Q 030606 163 D---PGTGFVRKQ 172 (174)
Q Consensus 163 ~---~~~~FeIr~ 172 (174)
. .+++|.|.+
T Consensus 81 ~~~~~~~~F~i~~ 93 (93)
T PRK14432 81 NYPFQFNDFKIYY 93 (93)
T ss_pred CCCCCcCCeEEeC
Confidence 5 578999974
No 12
>PRK14425 acylphosphatase; Provisional
Probab=100.00 E-value=3.4e-32 Score=202.18 Aligned_cols=88 Identities=42% Similarity=0.717 Sum_probs=84.1
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
+++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|+.|+++|+++|+.|+|+++++++.++.
T Consensus 5 ~~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dGsVei~~qG~~~~le~f~~~l~~gp~~a~V~~i~~~~~~~~ 84 (94)
T PRK14425 5 REAVRVRITGRVQGVGFRDWTRDEAERLGLTGWVRNESDGSVTALIAGPDSAISAMIERFRRGPPGASVSGVETEAAQLE 84 (94)
T ss_pred ceEEEEEEEEeEecccchHHHHHHHHHhCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEEEEEEEEEcCCC
Confidence 45999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred C-CCCcEEe
Q 030606 164 P-GTGFVRK 171 (174)
Q Consensus 164 ~-~~~FeIr 171 (174)
+ +.+|+|+
T Consensus 85 ~~~~~F~I~ 93 (94)
T PRK14425 85 EAPTDFRIT 93 (94)
T ss_pred CCCCCeEEe
Confidence 6 5899997
No 13
>PRK14420 acylphosphatase; Provisional
Probab=100.00 E-value=3.4e-32 Score=199.92 Aligned_cols=90 Identities=27% Similarity=0.369 Sum_probs=85.0
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.++.
T Consensus 1 m~~~~~~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~~p~~a~V~~i~~~~~~~~ 80 (91)
T PRK14420 1 MLQYHIIVDGRVQGVGFRYFVQMEADKRKLTGWVKNRDDGTVEIEAEGPEEALQLFLDAIEKGSPFSKVTDVHIEERDVL 80 (91)
T ss_pred CeEEEEEEEEeeCCcCChHHHHHHHHHcCCEEEEEECCCCcEEEEEEECHHHHHHHHHHHHhCCCCCEEEEEEEEEcCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred C-CCCcEEeec
Q 030606 164 P-GTGFVRKQT 173 (174)
Q Consensus 164 ~-~~~FeIr~t 173 (174)
+ +.+|+|..+
T Consensus 81 ~~~~~F~I~~~ 91 (91)
T PRK14420 81 SGEKQFRIMYG 91 (91)
T ss_pred CCCCCEEEeeC
Confidence 5 589999863
No 14
>PRK14444 acylphosphatase; Provisional
Probab=100.00 E-value=3.7e-32 Score=201.12 Aligned_cols=89 Identities=38% Similarity=0.615 Sum_probs=84.7
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|++++++|+|+|||||||+|++++|.+|||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.++
T Consensus 2 ~m~~~~i~v~G~VQGVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~i~~~~~~~ 81 (92)
T PRK14444 2 DMVRAHVFISGRVQGVNFRAYTRDRAREAGVKGWVRNLSDGRVEAVFEGSRPAVQKMISWCYSGPSHARVERVEVHWEEP 81 (92)
T ss_pred CcEEEEEEEEEeeCCcCcHHHHHHHHHHhCCEEEEEECCCCcEEEEEEcCHHHHHHHHHHHHhCCCCcEEEEEEEEEccC
Confidence 47799999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +.+|+|.
T Consensus 82 ~~~~~~F~I~ 91 (92)
T PRK14444 82 TGEERTFTIV 91 (92)
T ss_pred CCCCCCEEEe
Confidence 66 5899985
No 15
>PRK14442 acylphosphatase; Provisional
Probab=100.00 E-value=3.3e-32 Score=201.01 Aligned_cols=89 Identities=38% Similarity=0.560 Sum_probs=84.9
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
+.+++++|+|+|||||||+|++++|.++||+|||+|++||+|+|++||+++++++|+++|+++|+.|+|+++++++.++.
T Consensus 3 ~~~~~~~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~~ 82 (91)
T PRK14442 3 RICLHAYVGGRVQGVGFRQATREEADRLELDGWVRNLDDGRVEVVWEGEEDRAKALERWLGRGPRHAEVSAVEVEQMPLQ 82 (91)
T ss_pred cEEEEEEEEEecCCccccHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCeEEEEEEEEEcCCC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCcEEee
Q 030606 164 PGTGFVRKQ 172 (174)
Q Consensus 164 ~~~~FeIr~ 172 (174)
++.+|+|+.
T Consensus 83 ~~~~F~I~~ 91 (91)
T PRK14442 83 GIAGFVVRR 91 (91)
T ss_pred CCCCeEEeC
Confidence 778999973
No 16
>PRK14435 acylphosphatase; Provisional
Probab=100.00 E-value=3.7e-32 Score=200.38 Aligned_cols=89 Identities=34% Similarity=0.483 Sum_probs=85.1
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||+++++++|+++|+++|+.|+|+++++++.++.
T Consensus 1 m~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~~ 80 (90)
T PRK14435 1 MKALKIRVEGIVQGVGFRYFTRRVAKSLGVKGYVMNMDDGSVFIHAEGDENALRRFLNEVAKGPPAAVVTNVSVEETTPE 80 (90)
T ss_pred CeEEEEEEEEEeCCcCChHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEEEEEEEEEcCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCcEEee
Q 030606 164 PGTGFVRKQ 172 (174)
Q Consensus 164 ~~~~FeIr~ 172 (174)
++++|+|+.
T Consensus 81 ~~~~F~I~~ 89 (90)
T PRK14435 81 GYEDFTIKY 89 (90)
T ss_pred CCCCEEEEe
Confidence 678999974
No 17
>PRK14422 acylphosphatase; Provisional
Probab=100.00 E-value=3.5e-32 Score=201.76 Aligned_cols=89 Identities=30% Similarity=0.392 Sum_probs=84.7
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.|+++++.|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|++|++++.++
T Consensus 4 ~~~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gp~~a~V~~i~~~~~~~ 83 (93)
T PRK14422 4 PDVRLTAWVHGHVQGVGFRWWTRSRALELGLTGYAANLADGRVQVVAEGPRAACEKLLQLLRGDDTPGRVDKVVEDWSEP 83 (93)
T ss_pred ccEEEEEEEEEeeCCcCcHHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhCCCCcEEEEEEEEEccC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999988887
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +.+|+|+
T Consensus 84 ~~~~~~F~I~ 93 (93)
T PRK14422 84 RGQITGFVER 93 (93)
T ss_pred CCCCCCEEEC
Confidence 66 5899985
No 18
>PRK14434 acylphosphatase; Provisional
Probab=100.00 E-value=2.6e-32 Score=202.24 Aligned_cols=88 Identities=33% Similarity=0.393 Sum_probs=82.2
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcC-CeEEEEeCCCCcEEEEEEcCH-HhHHHHHHHHhcCC-CCeEEEEEEEEEc
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLG-LKGWVRNRRDGSVEALFSGNP-DSVKEMEQRCCHGP-SDAVVTGLQVFPS 160 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~Lg-L~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~L~~gP-p~A~V~~Iei~~~ 160 (174)
|++++++|+|+|||||||+|++++|++|| |+|||+|++||+|||++||++ +++++|+++|+++| |.|+|+++++++.
T Consensus 1 m~~~~i~v~G~VQGVGFR~fv~~~A~~lg~l~G~V~N~~dGsVei~~qG~~~~~l~~f~~~l~~g~pp~a~V~~v~~~~~ 80 (92)
T PRK14434 1 MQKVRMIVSGRVQGVGFRYSVYSLALEIGDIYGRVWNNDDGTVEILAQSDDSAKLAKFIQEIRKGPSKWAKVTYVDVTMA 80 (92)
T ss_pred CeEEEEEEEEeecceeEhHHHHHHHHHcCCcEEEEEECCCCCEEEEEEcCCHHHHHHHHHHHhcCCCCCEEEEEEEEEEc
Confidence 56899999999999999999999999999 999999999999999999997 69999999999986 5999999999988
Q ss_pred CCCCCCCcEEe
Q 030606 161 NDDPGTGFVRK 171 (174)
Q Consensus 161 e~~~~~~FeIr 171 (174)
++.++++|+|+
T Consensus 81 ~~~~~~~F~I~ 91 (92)
T PRK14434 81 NFEDFSDFKIA 91 (92)
T ss_pred CCCCCCCeEEC
Confidence 76667899996
No 19
>PRK14448 acylphosphatase; Provisional
Probab=100.00 E-value=4e-32 Score=200.25 Aligned_cols=88 Identities=34% Similarity=0.503 Sum_probs=84.0
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++++.|+++|+++|+.|+|++++.++.+..
T Consensus 1 m~~~~~~v~G~VQGVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V~~v~~~~~~~~ 80 (90)
T PRK14448 1 MLKKQFIVYGHVQGVGFRYFTWQEATKIGIKGYVKNRPDGSVEVVAVGSDAQIAAFRDWLQHGPPTAVVCNVIEQDYQGS 80 (90)
T ss_pred CeEEEEEEEEeecCcchHHHHHHHHHHhCCEEEEEECCCCCEEEEEEeCHHHHHHHHHHHHhCCCceEEEEEEEEEcCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999988865
Q ss_pred C-CCCcEEe
Q 030606 164 P-GTGFVRK 171 (174)
Q Consensus 164 ~-~~~FeIr 171 (174)
+ +.+|+|+
T Consensus 81 ~~~~~F~i~ 89 (90)
T PRK14448 81 RQFTHFSVR 89 (90)
T ss_pred CCCCCEEEe
Confidence 4 7899997
No 20
>PRK14451 acylphosphatase; Provisional
Probab=100.00 E-value=4.2e-32 Score=199.91 Aligned_cols=88 Identities=31% Similarity=0.377 Sum_probs=84.4
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|.++++.|+|+|||||||+|++++|.++||+|||+|+.||+|||++||++++|++|+++|+++|+.|+|+++++++.++.
T Consensus 2 ~~~~~~~V~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~i~~f~~~l~~gp~~a~V~~v~~~~~~~~ 81 (89)
T PRK14451 2 ELCMRCYISGRVQGVWFRASAKKLAEQLMISGWARNLADGRVEVFACGKEDKLEEFYTWLQKGPLNARVDVCTRENLPWQ 81 (89)
T ss_pred cEEEEEEEEEeeCCcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCceEEEEEEEEEcCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCcEEe
Q 030606 164 PGTGFVRK 171 (174)
Q Consensus 164 ~~~~FeIr 171 (174)
++.+|+|.
T Consensus 82 ~~~~F~I~ 89 (89)
T PRK14451 82 DYISFDVL 89 (89)
T ss_pred CCCCeEEC
Confidence 77899984
No 21
>PRK14446 acylphosphatase; Provisional
Probab=100.00 E-value=2.3e-32 Score=201.59 Aligned_cols=86 Identities=40% Similarity=0.607 Sum_probs=82.6
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
|+++++.|+|+|||||||+|++++|+++||+|||+|++||+|||++||++++++.|+++|+++|+.|+|+++++++.++.
T Consensus 1 m~~~~i~v~G~VQGVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~l~~f~~~l~~gP~~a~V~~v~~~~~~~~ 80 (88)
T PRK14446 1 MQAARFVVSGVVQGVWYRASTRERAVALGLVGHARNQADGSVEVVAAGSAAALEALEAWLWQGPPAATVAAVTRTPCAVP 80 (88)
T ss_pred CeEEEEEEEEecCCeeEhHHHHHHHeeCCeEEEEEECCCCCEEEEEEeCHHHHHHHHHHHhhCCCceEEEEEEEEEeCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred CCCCcE
Q 030606 164 PGTGFV 169 (174)
Q Consensus 164 ~~~~Fe 169 (174)
++++|.
T Consensus 81 ~~~~F~ 86 (88)
T PRK14446 81 PTEDFV 86 (88)
T ss_pred ccCccc
Confidence 777885
No 22
>PF00708 Acylphosphatase: Acylphosphatase; InterPro: IPR001792 Acylphosphatase (3.6.1.7 from EC) is an enzyme of approximately 98 amino acid residues that specifically catalyses the hydrolysis of the carboxyl-phosphate bond of acylphosphates [], its substrates including 1,3-diphosphoglycerate and carbamyl phosphate []. The enzyme has a mainly beta-sheet structure with 2 short alpha-helical segments. It is distributed in a tissue-specific manner in a wide variety of species, although its physiological role is as yet unknown []: it may, however, play a part in the regulation of the glycolytic pathway and pyrimidine biosynthesis []. There are two known isozymes. One seems to be specific to muscular tissues, the other, called 'organ-common type', is found in many different tissues. While bacterial and archebacterial hypothetical proteins that are highly similar to that enzyme and that probably possess the same activity. These proteins include: Escherichia coli putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yccX). Bacillus subtilis putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (gene yflL). Archaeoglobus fulgidus putative acylphosphatase (3.6.1.7 from EC) (acylphosphate phosphohydrolase) (O29440 from SWISSPROT). An acylphosphatase-like domain is also found in some prokaryotic hydrogenase maturation HypF carbamoyltransferases [, ].; PDB: 1APS_A 1GXT_A 1GXU_A 2HLT_A 2FHM_A 2HLU_A 3BR8_A 1ULR_A 3TRG_A 2BJD_A ....
Probab=99.98 E-value=2.1e-32 Score=199.50 Aligned_cols=88 Identities=36% Similarity=0.543 Sum_probs=81.2
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
.++++++|+|+|||||||+|++++|+++||+|||+|++||+|+|++||+++++++|+++|+++||.|+|+++++++.++.
T Consensus 3 ~~~~~i~v~G~VQGVgFR~~v~~~A~~~gl~G~V~N~~dg~V~i~~~G~~~~l~~f~~~l~~g~p~a~V~~i~~~~~~~~ 82 (91)
T PF00708_consen 3 KKRYRIIVSGRVQGVGFRPFVKRIARKLGLTGWVRNLPDGSVEIEAEGEEEQLEEFIKWLKKGPPPARVDEIEVEELEPE 82 (91)
T ss_dssp EEEEEEEEEEETSSSSHHHHHHHHHHHTT-EEEEEE-TTSEEEEEEEEEHHHHHHHHHHHHHSSTTSEEEEEEEEEEEEC
T ss_pred cEEEEEEEEEEECcCChhHHHHHHHHHhCCceEEEECCCCEEEEEEEeCHHHHHHHHHHHHhCCCCcEEEEEEEEECCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999988899999999999887
Q ss_pred C-CCCcEEe
Q 030606 164 P-GTGFVRK 171 (174)
Q Consensus 164 ~-~~~FeIr 171 (174)
+ +++|+|+
T Consensus 83 ~~~~~F~Ir 91 (91)
T PF00708_consen 83 GEYSDFEIR 91 (91)
T ss_dssp SS-SSEEE-
T ss_pred CCCCCeEEC
Confidence 7 4999996
No 23
>PRK14427 acylphosphatase; Provisional
Probab=99.98 E-value=6.7e-32 Score=200.60 Aligned_cols=91 Identities=29% Similarity=0.360 Sum_probs=86.0
Q ss_pred CCceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcC
Q 030606 82 PPAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSN 161 (174)
Q Consensus 82 ~~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e 161 (174)
..+++++++|+|+|||||||+|++++|.++||+|||+|+.||+|||++||++++|++|+++|+++|+.|+|+++++++.+
T Consensus 3 ~~~~~~~i~v~G~VQGVGFR~fv~~~A~~lgl~G~V~N~~dGsVei~~qG~~~~i~~f~~~l~~~p~~a~V~~i~~~~~~ 82 (94)
T PRK14427 3 AHQVRLSARVFGVVQGVGFRYWTMRKAEELGLTGTVRNLDDGSVALVAEGTGEQVEKLLDWLNSDRAPGRVERVDHTVSE 82 (94)
T ss_pred CCcEEEEEEEEEEeCCcCChHHHHHHHHHcCCEEEEEECCCCeEEEEEEECHHHHHHHHHHHhhCCCCcEEEEEEEEEcC
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCCcEEee
Q 030606 162 DDP-GTGFVRKQ 172 (174)
Q Consensus 162 ~~~-~~~FeIr~ 172 (174)
+.+ +.+|+|+.
T Consensus 83 ~~~~~~~F~I~~ 94 (94)
T PRK14427 83 ATGEFREFRARD 94 (94)
T ss_pred CCCCCCCEEEeC
Confidence 766 68999974
No 24
>PRK14437 acylphosphatase; Provisional
Probab=99.98 E-value=6e-32 Score=206.43 Aligned_cols=90 Identities=29% Similarity=0.473 Sum_probs=86.3
Q ss_pred CCceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcC
Q 030606 82 PPAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSN 161 (174)
Q Consensus 82 ~~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e 161 (174)
..+++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.+
T Consensus 20 ~~~~~~~i~V~G~VQGVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~qG~~~~ie~f~~~L~~gP~~a~V~~i~~~~~~ 99 (109)
T PRK14437 20 KNETCIHATVSGKVQGVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGERDSIMILTEWLWEGPPQAAVSNVNWEEIV 99 (109)
T ss_pred cccEEEEEEEEEecCCcCchHHHHHHHHHhCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCceEEEEEEEEEcC
Confidence 35889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcEEe
Q 030606 162 DDPGTGFVRK 171 (174)
Q Consensus 162 ~~~~~~FeIr 171 (174)
+.++.+|+|+
T Consensus 100 ~~~~~~F~I~ 109 (109)
T PRK14437 100 VEDYSDFRVR 109 (109)
T ss_pred CCCCCCeEEC
Confidence 8778899985
No 25
>PRK14433 acylphosphatase; Provisional
Probab=99.98 E-value=6.1e-32 Score=198.35 Aligned_cols=86 Identities=33% Similarity=0.483 Sum_probs=82.6
Q ss_pred EEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCCCC
Q 030606 86 TVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDDPG 165 (174)
Q Consensus 86 r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~~~ 165 (174)
+++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|+.|+|+++++++.++.++
T Consensus 2 ~~~i~v~G~VQGVGFR~~v~~~A~~~~l~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V~~i~~~~~~~~~~ 81 (87)
T PRK14433 2 RLTALVSGRVQGVGYRAFVQKKARELGLSGYAENLSDGRVEVVAEGPKEALERLLHWLRRGPRHARVEAVDVQWSEATGL 81 (87)
T ss_pred cEEEEEEEeeeCcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECHHHHHHHHHHHhhCCCCcEEEEEEEEEcCCCCC
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred CCcEEe
Q 030606 166 TGFVRK 171 (174)
Q Consensus 166 ~~FeIr 171 (174)
.+|+|+
T Consensus 82 ~~F~I~ 87 (87)
T PRK14433 82 KGFHVY 87 (87)
T ss_pred CCEEEC
Confidence 899985
No 26
>PRK14440 acylphosphatase; Provisional
Probab=99.98 E-value=7.8e-32 Score=198.85 Aligned_cols=88 Identities=31% Similarity=0.405 Sum_probs=84.5
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
+|++++++|+|+|||||||+|++++|.++||+|||+|+.||+|||++||+++++++|+++|+++|+.|+|++|++++.++
T Consensus 1 ~m~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~gp~~a~V~~i~~~~~~~ 80 (90)
T PRK14440 1 MLKRMYARVYGLVQGVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEEALSKLLERIKQGPPAAEVEKVDFSFSEY 80 (90)
T ss_pred CcEEEEEEEEEeEeccCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCcEEEEEEEEEeCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC-CCCcEE
Q 030606 163 DP-GTGFVR 170 (174)
Q Consensus 163 ~~-~~~FeI 170 (174)
.+ +.+|+|
T Consensus 81 ~~~~~~F~i 89 (90)
T PRK14440 81 KGEFEDFET 89 (90)
T ss_pred CCCCCCeEE
Confidence 76 789987
No 27
>PRK14421 acylphosphatase; Provisional
Probab=99.98 E-value=8.7e-32 Score=202.53 Aligned_cols=92 Identities=51% Similarity=0.824 Sum_probs=85.6
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
.+++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||+++++++|+++|+++|+.|+|++|++++.++
T Consensus 2 ~~~~~~~~v~G~VQGVGFR~fv~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~gP~~a~V~~v~~~~~~~ 81 (99)
T PRK14421 2 SEIVRQVTIRGRVQGVGYRAWVARTAEALGLEGWVRNRRDGSVEALFAGPADAVAEMIARCRRGPSAARVDAVEDEPAAP 81 (99)
T ss_pred CcEEEEEEEEEeEcCccchHHHHHHHHHhCCEEEEEECCCCEEEEEEeCCHHHHHHHHHHHHhCCCCcEEEEEEEEEcCc
Confidence 46688999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CC------CCCcEEeecC
Q 030606 163 DP------GTGFVRKQTV 174 (174)
Q Consensus 163 ~~------~~~FeIr~t~ 174 (174)
.. ..+|+|++|+
T Consensus 82 ~~~~~~~~~~~F~i~~~~ 99 (99)
T PRK14421 82 DALNLRRPGERFSILPTV 99 (99)
T ss_pred ccccccCCCCCEEEEecC
Confidence 43 3469999875
No 28
>PRK14426 acylphosphatase; Provisional
Probab=99.98 E-value=1.3e-31 Score=198.04 Aligned_cols=88 Identities=34% Similarity=0.470 Sum_probs=83.8
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcC-CCCeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHG-PSDAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~g-Pp~A~V~~Iei~~~e~ 162 (174)
+.+++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++ |+.|+|++|++++.++
T Consensus 3 ~~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~~G~~~~i~~f~~~l~~g~P~~a~V~~i~~~~~~~ 82 (92)
T PRK14426 3 KVCIIAWVYGRVQGVGFRYHTQHEALKLGLTGYAKNLDDGSVEVVACGEEEQVEKLMEWLKEGGPRSARVDRVLTEPHSP 82 (92)
T ss_pred cEEEEEEEEEeeCCcCchHHHHHHHHHhCCEEEEEECCCCcEEEEEEeCHHHHHHHHHHHhcCCCCCeEEEEEEEEEcCC
Confidence 478999999999999999999999999999999999999999999999999999999999998 9999999999999987
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +.+|+|+
T Consensus 83 ~~~~~~F~I~ 92 (92)
T PRK14426 83 RGELTGFSIR 92 (92)
T ss_pred CCCCCCEEEC
Confidence 74 7899985
No 29
>PRK14449 acylphosphatase; Provisional
Probab=99.98 E-value=1.4e-31 Score=196.93 Aligned_cols=88 Identities=31% Similarity=0.335 Sum_probs=83.4
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
.++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||+++++++|+++|+++|+.|+|+++++++.++.
T Consensus 2 ~~~~~i~v~G~VQGVGFR~fv~~~A~~lgl~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~~~~~~a~V~~i~~~~~~~~ 81 (90)
T PRK14449 2 KKTVHLRITGHVQGVGLRYSVYQKAVSLGITGYAENLYDGSVEVVAEGDEENIKELINFIKTGLRWARVDNVEERWSDYK 81 (90)
T ss_pred ceEEEEEEEEeecCcChHHHHHHHHHHcCCEEEEEECCCCeEEEEEEeCHHHHHHHHHHHhhCCCceEEEEEEEEEecCC
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred C-CCCcEEe
Q 030606 164 P-GTGFVRK 171 (174)
Q Consensus 164 ~-~~~FeIr 171 (174)
+ +.+|+|.
T Consensus 82 ~~~~~F~I~ 90 (90)
T PRK14449 82 GEYRDFRIY 90 (90)
T ss_pred CCCCCEEEC
Confidence 6 5899984
No 30
>PRK14424 acylphosphatase; Provisional
Probab=99.97 E-value=3.5e-31 Score=197.38 Aligned_cols=89 Identities=36% Similarity=0.521 Sum_probs=85.0
Q ss_pred CCceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcC
Q 030606 82 PPAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSN 161 (174)
Q Consensus 82 ~~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e 161 (174)
+.|++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|+.|+++|+++|+.|+|++|+.++.+
T Consensus 4 ~~m~~~~~~v~G~VQGVGFR~~v~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~v~~f~~~l~~gp~~a~V~~v~~~~~~ 83 (94)
T PRK14424 4 ERIETYYVRVRGVVQGVGFRHATVREAHALGLRGWVANLEDGTVEAMIQGPAAQIDRMLAWLRHGPPAARVTEVTFEERR 83 (94)
T ss_pred CccEEEEEEEEEeecCCchHHHHHHHHHHcCCeEEEEECCCCCEEEEEEECHHHHHHHHHHHHhCCCCcEEEEEEEEEeC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC-CCCcEE
Q 030606 162 DDP-GTGFVR 170 (174)
Q Consensus 162 ~~~-~~~FeI 170 (174)
..+ +.+|++
T Consensus 84 ~~~~~~~F~~ 93 (94)
T PRK14424 84 TEKRFERFQQ 93 (94)
T ss_pred CCCCCCCcEE
Confidence 765 789987
No 31
>PRK14452 acylphosphatase; Provisional
Probab=99.97 E-value=3.3e-31 Score=201.88 Aligned_cols=90 Identities=36% Similarity=0.497 Sum_probs=85.0
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
++++++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++++++|+.|+|+++++++.++
T Consensus 18 ~~~~~~i~V~G~VQGVGFR~~v~~~A~~lgL~G~V~N~~dGsVeI~~qG~~~~ve~F~~~l~~gP~~A~V~~v~~~~~~~ 97 (107)
T PRK14452 18 FAERWRFLIEGRVQGVGFRASCCRRALDLGLSGWVRNLSDGSVEVQAEGPPLALSELRAWCERGPPGARVKRVDPSQLPV 97 (107)
T ss_pred hhEEEEEEEEEeecCcChhHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhcCCCCcEEEEEEEEEeCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCcEEee
Q 030606 163 DPGTGFVRKQ 172 (174)
Q Consensus 163 ~~~~~FeIr~ 172 (174)
.+..+|+|+.
T Consensus 98 ~~~~~F~I~~ 107 (107)
T PRK14452 98 TGDDWFEVRY 107 (107)
T ss_pred CCCCcEEEeC
Confidence 6666799974
No 32
>COG1254 AcyP Acylphosphatases [Energy production and conversion]
Probab=99.97 E-value=4.2e-31 Score=196.84 Aligned_cols=90 Identities=34% Similarity=0.468 Sum_probs=85.6
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSND 162 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~ 162 (174)
+|.+++++|+|+|||||||+|++++|.+|||+|||+|++||+|||+++|++++++.|++||++||+.|+|+.|++++.++
T Consensus 2 ~~~~~~~~V~GrVQGVGFR~~~~~~A~~lgl~G~V~N~~DGsVeiva~G~~~~v~~~~~~l~~g~~~a~V~~v~~~~~~~ 81 (92)
T COG1254 2 MMVRARARVYGRVQGVGFRYFTRSEALRLGLTGWVKNLDDGSVEIVAEGPDEAVEKFIEWLRKGPPAAKVERVEVEEEEY 81 (92)
T ss_pred CcEEEEEEEEEEeccccHHHHHHHHHHHCCCEEEEEECCCCeEEEEEEcCHHHHHHHHHHHHhCCCceEEEEEEEEeccc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred CC-CCCcEEee
Q 030606 163 DP-GTGFVRKQ 172 (174)
Q Consensus 163 ~~-~~~FeIr~ 172 (174)
.+ +.+|+|+.
T Consensus 82 ~~~~~~F~i~~ 92 (92)
T COG1254 82 TGEFPDFSIRY 92 (92)
T ss_pred cccCCCCEecC
Confidence 66 69999974
No 33
>PRK14443 acylphosphatase; Provisional
Probab=99.97 E-value=2.8e-30 Score=192.45 Aligned_cols=89 Identities=25% Similarity=0.268 Sum_probs=82.3
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCC-CeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPS-DAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp-~A~V~~Iei~~~e~ 162 (174)
..+++++|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|+++|| .|+|+++++++.++
T Consensus 3 ~~~~~i~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dG~Vei~~qG~~~~l~~f~~~l~~g~p~~a~V~~v~~~~~~~ 82 (93)
T PRK14443 3 RDTAILRVTGFVQGVGFRYTTKHVAYKYDISGTVKNLDDGSVEIHAIAEEENLNKFIDAIKKGPSPGCRIEHVYIYKGAP 82 (93)
T ss_pred cEEEEEEEEEeeCCccCcHHHHHHHHHcCCEEEEEECCCCEEEEEEECCHHHHHHHHHHHhcCCCCcEEEEEEEEEEcCC
Confidence 34789999999999999999999999999999999999999999999999999999999999875 99999999998776
Q ss_pred CC-CCCcEEee
Q 030606 163 DP-GTGFVRKQ 172 (174)
Q Consensus 163 ~~-~~~FeIr~ 172 (174)
.+ +.+|+|..
T Consensus 83 ~~~~~~F~I~~ 93 (93)
T PRK14443 83 VEERKTFDIVY 93 (93)
T ss_pred CCCCCCEEEeC
Confidence 54 68999974
No 34
>PRK14431 acylphosphatase; Provisional
Probab=99.97 E-value=3.2e-30 Score=190.10 Aligned_cols=85 Identities=27% Similarity=0.313 Sum_probs=80.1
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCC-CCeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGP-SDAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gP-p~A~V~~Iei~~~e~ 162 (174)
|+++++.|+|+|||||||+|++++|.++||+|||+|++|| |||++||++++|++|+++|+++| +.|+|+++++++.++
T Consensus 1 m~~~~~~v~G~VQGVGFR~~~~~~A~~~gl~G~V~N~~dg-Vei~~qG~~~~l~~f~~~l~~g~p~~a~V~~v~~~~~~~ 79 (89)
T PRK14431 1 MRHIHLQVFGRVQGVGFRYFTQRIAMNYNIVGTVQNVDDY-VEIYAQGDDADLERFIQGVIEGASPASNVTSYQLEELEL 79 (89)
T ss_pred CeEEEEEEEEecCCeeEhHHHHHHHhhcCCEEEEEECCCc-EEEEEEcCHHHHHHHHHHHhcCCCCcEEEEEEEEEEeCC
Confidence 5689999999999999999999999999999999999997 99999999999999999999997 699999999999987
Q ss_pred CC-CCCcE
Q 030606 163 DP-GTGFV 169 (174)
Q Consensus 163 ~~-~~~Fe 169 (174)
.+ +.+|+
T Consensus 80 ~~~~~~F~ 87 (89)
T PRK14431 80 NQKLSDFR 87 (89)
T ss_pred CCcCCCcE
Confidence 65 67886
No 35
>PRK14439 acylphosphatase; Provisional
Probab=99.96 E-value=7.6e-29 Score=201.23 Aligned_cols=88 Identities=34% Similarity=0.417 Sum_probs=83.1
Q ss_pred ceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc-CCCCeEEEEEEEEEcCC
Q 030606 84 AKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH-GPSDAVVTGLQVFPSND 162 (174)
Q Consensus 84 ~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~-gPp~A~V~~Iei~~~e~ 162 (174)
+.++++.|+|+|||||||+|++++|.++||+|||+|++||+|||++||++++|++|+++|++ +|+.|+|++|++++.++
T Consensus 74 ~~r~~i~VsGrVQGVGFR~fv~~~A~qlGLtGwVrNl~DGsVEI~aQG~ee~Ie~Fi~~L~~~gPp~A~Ve~I~v~~~~~ 153 (163)
T PRK14439 74 KVCIIAWVYGRVQGVGFRYTTQYEAKKLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHP 153 (163)
T ss_pred heeEEEEEEEeeCCcCchHHHHHHHHHhCCEEEEEECCCCCEEEEEEcCHHHHHHHHHHHhhCCCCCeEEEEEEEEEcCC
Confidence 37889999999999999999999999999999999999999999999999999999999987 79999999999999887
Q ss_pred CC-CCCcEEe
Q 030606 163 DP-GTGFVRK 171 (174)
Q Consensus 163 ~~-~~~FeIr 171 (174)
.+ +++|+|+
T Consensus 154 ~~~~~~F~Ir 163 (163)
T PRK14439 154 SGELTDFRIR 163 (163)
T ss_pred CCCCCCEEEC
Confidence 66 6899985
No 36
>COG0068 HypF Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=9.2e-24 Score=200.98 Aligned_cols=86 Identities=33% Similarity=0.524 Sum_probs=81.5
Q ss_pred EEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc-CCCCeEEEEEEEEEcCCCCC
Q 030606 87 VRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH-GPSDAVVTGLQVFPSNDDPG 165 (174)
Q Consensus 87 ~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~-gPp~A~V~~Iei~~~e~~~~ 165 (174)
++|+|+|.|||||||||||++|+++||+|||+|+++| |||+++|+++.+++|+..|++ .||+|+|+++++++++...+
T Consensus 1 ~~i~v~G~VQGVGFRPFVyrlA~~~~L~G~V~N~g~g-VeI~v~~~~~~~e~Fi~~L~~~~PPLarI~~~~i~~~~~~~f 79 (750)
T COG0068 1 VKIRVRGIVQGVGFRPFVYRLAQKLGLKGYVRNDGDG-VEIVLEGDEENLEEFLNRLKKEKPPLARIEKVEIEEISESGF 79 (750)
T ss_pred CeEEEEEEEeeccccHHHHHHHHHcCCceEEecCCCe-EEEEEecCcccHHHHHHHHhhcCCchhhhhhhhccccccccC
Confidence 4789999999999999999999999999999999999 999999999999999999985 59999999999999996669
Q ss_pred CCcEEeec
Q 030606 166 TGFVRKQT 173 (174)
Q Consensus 166 ~~FeIr~t 173 (174)
.+|.|+++
T Consensus 80 ~~F~I~~S 87 (750)
T COG0068 80 TDFRIRKS 87 (750)
T ss_pred CceEEEec
Confidence 99999975
No 37
>KOG3360 consensus Acylphosphatase [Energy production and conversion]
Probab=99.83 E-value=3.3e-20 Score=139.77 Aligned_cols=91 Identities=31% Similarity=0.541 Sum_probs=82.7
Q ss_pred CCCceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHh-cCCCCeEEEEEEEEE
Q 030606 81 SPPAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCC-HGPSDAVVTGLQVFP 159 (174)
Q Consensus 81 ~~~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~-~gPp~A~V~~Iei~~ 159 (174)
......+.+.|.|+||||-||.|+...|.+|||.|||+|..+|+|+-.+||+.+.+++|.+||. .|+|.+.|+..+...
T Consensus 4 ~~~i~s~dfEvfGRVQGv~fr~~t~~~a~~lGlrGWv~Nt~~GtvkG~leGp~~~vd~mk~wl~~~gsP~s~I~~~ef~n 83 (98)
T KOG3360|consen 4 AESIKSCDFEVFGRVQGVCFRKHTLDEAKKLGLRGWVMNTSEGTVKGQLEGPPEKVDEMKEWLLTRGSPVSAIDRAEFSN 83 (98)
T ss_pred cceeEEEeEEEEeeeccchhhHHHHHHHHhhcceEEEEecCCceEEEEEeCCHHHHHHHHHHHHhcCChhHheeeeeecc
Confidence 4567789999999999999999999999999999999999999999999999999999999998 689999999998876
Q ss_pred cCC---CCCCCcEEe
Q 030606 160 SND---DPGTGFVRK 171 (174)
Q Consensus 160 ~e~---~~~~~FeIr 171 (174)
... -.|.+|+|+
T Consensus 84 ~kei~~~~y~~F~Ik 98 (98)
T KOG3360|consen 84 QKEISRYTYKDFSIK 98 (98)
T ss_pred cceecccccceeeeC
Confidence 543 347889985
No 38
>COG1054 Predicted sulfurtransferase [General function prediction only]
Probab=94.95 E-value=0.12 Score=46.43 Aligned_cols=61 Identities=16% Similarity=0.188 Sum_probs=53.2
Q ss_pred EEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEE
Q 030606 91 VKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVV 152 (174)
Q Consensus 91 ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V 152 (174)
..-.=+---||...+.+..++||+|.+.-...| +-..+.|+.+.++++++|+...|..+.+
T Consensus 13 f~~i~dp~~~~~~l~~~~~~~~vkGrillA~EG-INgtvsG~~e~~~~~~~~l~a~~~f~~l 73 (308)
T COG1054 13 FVPIEDPEALRDPLLALCKALGVKGRILLAHEG-INGTVSGSAEAIEAYMAWLRADPGFADL 73 (308)
T ss_pred EEecCCHHHHHHHHHHHHHHcCceeEEEEccCC-cceeEecCHHHHHHHHHHHHhCcccccc
Confidence 333445667999999999999999999999999 8889999999999999999998877655
No 39
>PF06544 DUF1115: Protein of unknown function (DUF1115); InterPro: IPR010541 This entry represents the C terminus of several eukaryotic RWD domain-containing proteins of unknown function.
Probab=94.79 E-value=0.1 Score=40.24 Aligned_cols=41 Identities=29% Similarity=0.336 Sum_probs=35.2
Q ss_pred hhHHHHHHHHhcCCeEEEEeC-CCCcEEEEEEcCHHhHHHHHHH
Q 030606 100 YRNWTIENATQLGLKGWVRNR-RDGSVEALFSGNPDSVKEMEQR 142 (174)
Q Consensus 100 FR~fV~rlA~~LgL~G~VrN~-~DGsVEI~aeG~ee~Ie~Fi~~ 142 (174)
-|.-|...|++|+|+|++.-. .-| -|+|||.+.+++.|.+.
T Consensus 14 ~R~kI~~nA~ql~LtG~~~~g~~pg--iIvvEG~~k~i~~y~~l 55 (128)
T PF06544_consen 14 KRFKIDKNAKQLHLTGFCLPGPKPG--IIVVEGGEKSIKEYKKL 55 (128)
T ss_pred HHHHHHHHHHHhCCeEEEEEcCCcE--EEEEECCHHHHHHHHHH
Confidence 578899999999999998755 333 47889999999999988
No 40
>PRK01415 hypothetical protein; Validated
Probab=94.62 E-value=0.19 Score=43.57 Aligned_cols=72 Identities=13% Similarity=0.066 Sum_probs=54.9
Q ss_pred cchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCCCCCCcEEe
Q 030606 98 VFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDDPGTGFVRK 171 (174)
Q Consensus 98 VGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~~~~~FeIr 171 (174)
--+|...+.++.+++|+|.+.-...| |-..+.|+.+.+++|+++|+..|..+.+ ++.+.+.+..+|....|+
T Consensus 20 ~~~~~~l~~~~~~~~~~G~i~la~EG-IN~tisg~~~~~~~~~~~l~~~~~~~~~-~~k~s~~~~~~F~~l~vr 91 (247)
T PRK01415 20 ANLIPKLLLIGKRKYVRGTILLANEG-FNGSFSGSYENVNLVLEELIKLTGPKDV-NVKINYSDVHPFQKLKVR 91 (247)
T ss_pred HHHHHHHHHHHHHcCCeeEEEEccCc-cceEeeCCHHHHHHHHHHHHhCcCCCCc-eeecccccCCCCCccEEE
Confidence 46899999999999999999999999 8889999999999999999986655433 222223333345555554
No 41
>PRK05320 rhodanese superfamily protein; Provisional
Probab=92.79 E-value=0.4 Score=41.39 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=48.0
Q ss_pred chhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEE
Q 030606 99 FYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVT 153 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~ 153 (174)
-+|.+.+.++.++||+|.+.-..+| |-..+.|+.+.++.|..+++.+|..+.+.
T Consensus 19 ~~~~~~~~~~~~~~~~G~i~ia~eG-iN~t~~g~~~~id~~~~~l~~~~~~~dl~ 72 (257)
T PRK05320 19 TLRPLVLARCEALGLKGTILLAPEG-INLFLAGTREAIDAFYAWLRADARFADLQ 72 (257)
T ss_pred HHHHHHHHHHHHCCCeEEEEEcCCC-ceEEEEeeHHHHHHHHHHHhhCCCccCce
Confidence 5789999999999999999999999 88899999999999999999877554443
No 42
>TIGR01160 SUI1_MOF2 translation initiation factor SUI1, eukaryotic. Alternate name: MOF2. A similar protein family (see TIGRFAMs model TIGR01158) is found in prokaryotes. The human proteins complements a yeast SUI1 mutatation.
Probab=92.44 E-value=0.41 Score=37.10 Aligned_cols=54 Identities=13% Similarity=0.066 Sum_probs=41.7
Q ss_pred EEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHHH
Q 030606 90 VVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQRC 143 (174)
Q Consensus 90 ~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~L 143 (174)
+|+|--..+.+...++.+..+++..|.|++.+++.-+|++||+- +.+.+|+...
T Consensus 43 iI~Gl~~~~dlk~l~K~lKkk~~cGGsVk~~~~~~~~IelQGD~re~v~~~L~~~ 97 (110)
T TIGR01160 43 TVQGLPKEYDLKKIVKALKKEFACNGTVIEDPEMGEVIQLQGDQRKNVCEFLISQ 97 (110)
T ss_pred EEeccCChHHHHHHHHHHHHHhCCCceEEeCCCCCCEEEEeCcHHHHHHHHHHHc
Confidence 45665566678888999999999999999988766789999995 5565555443
No 43
>PF04940 BLUF: Sensors of blue-light using FAD; InterPro: IPR007024 An FAD-binding domain, BLUF, exemplified by the N terminus of the AppA protein, (Q53119 from SWISSPROT), from Rhodobacter sphaeroides, is present in various proteins, primarily from Bacteria. The BLUF domain is involved in sensing blue-light (and possibly redox) using FAD and is similar to the flavin-binding PAS domains and cryptochromes. The predicted secondary structure reveals that the BLUF domain is a novel FAD-binding fold [].; PDB: 2IYG_A 2IYI_B 1X0P_A 2HFN_G 3MZI_A 2HFO_E 3GFZ_A 3GG1_B 2KB2_A 3GFY_A ....
Probab=91.95 E-value=1.2 Score=32.82 Aligned_cols=59 Identities=17% Similarity=0.245 Sum_probs=46.6
Q ss_pred HHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCCCCCC
Q 030606 108 ATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDDPGTG 167 (174)
Q Consensus 108 A~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~~~~~ 167 (174)
-.+.||+|...-. +|..-=++||+++.|+.+.+.+.+.|....|..+...+++...|.+
T Consensus 30 N~~~~iTG~Ll~~-~~~F~Q~LEG~~~~v~~l~~rI~~D~RH~~v~~l~~~~i~~R~F~~ 88 (93)
T PF04940_consen 30 NRRHGITGFLLYD-GGHFFQVLEGPEEAVDALFERIKQDPRHSNVVVLFRGPIEERRFPD 88 (93)
T ss_dssp HHHHTEEEEEEEE-TTEEEEEEEEEHHHHHHHHHHHHT-TTEEEEEEEEEEEESS-SSTS
T ss_pred hhhcCCEEEEEEe-CCEEEEEEECCHHHHHHHHHHHhcCCCcCCeEEEEeeecCCccCCC
Confidence 3467999996544 5556668899999999999999999999999999999887655544
No 44
>PF10369 ALS_ss_C: Small subunit of acetolactate synthase; InterPro: IPR019455 This entry represents the C-terminal domain of the small subunit of acetolactate synthase (the N-terminal domain being an ACT domain). Acetolactate synthase is a tetrameric enzyme, composed of two large and two small subunits, which catalyses the first step in branched-chain amino acid biosynthesis. This reaction is sensitive to certain herbicides []. ; PDB: 2F1F_B 2FGC_A 2PC6_A.
Probab=90.43 E-value=0.86 Score=32.41 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=40.6
Q ss_pred ccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 97 GVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 97 GVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
...=|.=+.++|..++ |.|-.....++.+++.|++++++.|++.++.
T Consensus 12 ~~~~r~ei~~l~~~f~--a~ivd~~~~~~iie~tG~~~kid~fi~~l~~ 58 (75)
T PF10369_consen 12 TPENRSEILQLAEIFR--ARIVDVSPDSIIIELTGTPEKIDAFIKLLKP 58 (75)
T ss_dssp SCHHHHHHHHHHHHTT---EEEEEETTEEEEEEEE-HHHHHHHHHHSTG
T ss_pred CccCHHHHHHHHHHhC--CEEEEECCCEEEEEEcCCHHHHHHHHHHhhh
Confidence 3477889999999998 8999898889999999999999999999985
No 45
>PF04350 PilO: Pilus assembly protein, PilO; PDB: 2RJZ_B.
Probab=85.32 E-value=8.6 Score=28.96 Aligned_cols=62 Identities=11% Similarity=-0.002 Sum_probs=45.8
Q ss_pred HHHHHHHHhcCCeEEEEeC-----CCC----cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 102 NWTIENATQLGLKGWVRNR-----RDG----SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 102 ~fV~rlA~~LgL~G~VrN~-----~DG----sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
.-+.++|...||+=---+- .++ .|.+.++|+-.++-.|++.+...|....|+++++...+..
T Consensus 57 ~~l~~~A~~~gv~l~~~~p~~~~~~~~~~~~pv~i~l~G~Y~~l~~Fl~~l~~l~riv~i~~~~l~~~~~~ 127 (144)
T PF04350_consen 57 EDLNRLAKKSGVKLTSFEPGEEEKKEFYIEIPVTISLEGSYHQLLNFLNDLENLPRIVNIENLSLSRQSGG 127 (144)
T ss_dssp HHHHHHHHHTT-EEEEEEE---EE-SSEEEEEEEEEEEEEHHHHHHHHHHHHTSSS-EEEEEEEEEESSTT
T ss_pred HHHHHHHHHCCCeEEEeecCcccccCceEEEEEEEEEEeeHHHHHHHHHHHHcCCCeEEEeeeEEEecCCC
Confidence 3467788888875221111 122 6889999999999999999999999999999999987654
No 46
>PF04612 T2SM: Type II secretion system (T2SS), protein M; InterPro: IPR007690 General secretion pathway (GSP) protein M is a membrane protein involved in the export of proteins in bacteria. It consists of a short cytosolic N-terminal domain, a transmembrane domain, and a C-terminal periplasmic domain. The precise function of this protein is unknown, though in Vibrio cholerae, the EpsM protein interacts with the EpsL protein, and also forms homodimers [],; GO: 0006858 extracellular transport; PDB: 1UV7_A.
Probab=80.82 E-value=11 Score=29.12 Aligned_cols=66 Identities=17% Similarity=0.161 Sum_probs=41.2
Q ss_pred ccchhHHHHHHHHhcCCeEE-EEeCCCCcEEEEEEc-CHHhHHHHHHHHhcCCCCeEEEEEEEEEcCCC
Q 030606 97 GVFYRNWTIENATQLGLKGW-VRNRRDGSVEALFSG-NPDSVKEMEQRCCHGPSDAVVTGLQVFPSNDD 163 (174)
Q Consensus 97 GVGFR~fV~rlA~~LgL~G~-VrN~~DGsVEI~aeG-~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~~e~~ 163 (174)
+..-...+.+.|.+.||+.. +.+.++|+|++.+++ +-+.+-.|+..++.. ....|+++++...+..
T Consensus 80 ~~~L~~~i~~sa~~~gL~~~~~~~~~~~~v~v~l~~v~~~~L~~WL~~l~~~-~gi~v~~l~l~~~~~~ 147 (160)
T PF04612_consen 80 PQSLASLIQQSARQAGLTISRIQPQGEGRVQVWLENVSFDQLLQWLQQLEQQ-HGISVTQLSLTRADEP 147 (160)
T ss_dssp ---HHHHHHHHHHHCT--EEEEEEETT-EEEEEE--B-HHHHHHHHHHHHHH-S--EEEEEEEEE----
T ss_pred chhHHHHHHHHHHHCCCCeEeeccCCCeEEEEEEecCCHHHHHHHHHHHHHh-CCcEEEEEEEEEcCCC
Confidence 34788999999999999887 788888889999987 556666666666644 3478889888876533
No 47
>PRK07451 translation initiation factor Sui1; Validated
Probab=77.40 E-value=10 Score=29.60 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=31.6
Q ss_pred Ecccc-----hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 95 VQGVF-----YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 95 VQGVG-----FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
|+|.. +...+..+-.++|.-|.|++. +|++||+- +.+.+|+..
T Consensus 57 V~Gl~~~~~dlk~LaK~LK~k~gcGGtvkd~-----~IelQGD~r~~v~~~L~~ 105 (115)
T PRK07451 57 ITGFQHKPETLAKLLKQLKTQCGSGGTVKDN-----TIEIQGDHRQKILEILIK 105 (115)
T ss_pred EeCCCCCHHHHHHHHHHHHHHhcCCceEcCC-----EEEEcCcHHHHHHHHHHH
Confidence 67765 567777788888999999643 59999996 556655544
No 48
>PF09383 NIL: NIL domain; InterPro: IPR018449 This domain is found at the C terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family. ; PDB: 2QRR_A 3CED_A 2QSW_A 3TUZ_D 3TUJ_D 3DHX_B 3TUI_H 3DHW_D.
Probab=77.11 E-value=13 Score=25.56 Aligned_cols=59 Identities=12% Similarity=0.198 Sum_probs=44.5
Q ss_pred eEEEEEEEeEEcccchhHHHHHHHHhcCCe-----EEEEeCCC---CcEEEEEEcCHHhHHHHHHHHhcC
Q 030606 85 KTVRVVVKGRVQGVFYRNWTIENATQLGLK-----GWVRNRRD---GSVEALFSGNPDSVKEMEQRCCHG 146 (174)
Q Consensus 85 ~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~-----G~VrN~~D---GsVEI~aeG~ee~Ie~Fi~~L~~g 146 (174)
+.+++.+.|. ....|.+.++++++|+. |-|....+ |...+.+.|+++++++.+++|++.
T Consensus 3 ~l~~l~f~g~---~~~~piis~l~~~~~v~~nIl~g~i~~i~~~~~G~l~l~l~g~~~~~~~a~~~L~~~ 69 (76)
T PF09383_consen 3 RLVRLTFTGN---SAQEPIISQLIREFGVDVNILHGNIEEIQGTPFGILILELPGDDEEIEKAIAYLREQ 69 (76)
T ss_dssp EEEEEEEESC---SSSSCHHHHHHHHHT-EEEEEEEEEEEETTEEEEEEEEEEES-HHHHHHHHHHHHHT
T ss_pred eEEEEEEcCC---CcCchHHHHHHHHhCCCEEEEEEEeEEcCCeeEEEEEEEEECCHHHHHHHHHHHHHC
Confidence 3566777775 46689999999999975 55555444 678889999999999999999854
No 49
>CHL00100 ilvH acetohydroxyacid synthase small subunit
Probab=77.03 E-value=7.1 Score=32.27 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=41.3
Q ss_pred chhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 99 FYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
.=|.=+.++|+.++ |.|-.....++.+++.|+++++++|++.++.
T Consensus 96 ~~r~ei~~~~~~f~--a~ivdv~~~~~~ie~tG~~~ki~a~~~~l~~ 140 (174)
T CHL00100 96 QTRPEILEIAQIFR--AKVVDLSEESLILEVTGDPGKIVAIEQLLEK 140 (174)
T ss_pred cCHHHHHHHHHHhC--CEEEEecCCEEEEEEcCCHHHHHHHHHHhhh
Confidence 56899999999997 8998888889999999999999999999984
No 50
>PRK11895 ilvH acetolactate synthase 3 regulatory subunit; Reviewed
Probab=76.69 E-value=8.1 Score=31.51 Aligned_cols=44 Identities=11% Similarity=0.068 Sum_probs=40.2
Q ss_pred hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 100 YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 100 FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
=|.-+.++|..++ |.|-..+..++.+++.|+++++++|++.++.
T Consensus 97 ~r~~i~~i~~~f~--a~ivdv~~~~~~iE~tG~~~ki~~~~~~l~~ 140 (161)
T PRK11895 97 NRAEILRLADIFR--AKIVDVTPESLTIEVTGDSDKIDAFIDLLRP 140 (161)
T ss_pred cHHHHHHHHHHhC--CEEEEecCCEEEEEEeCCHHHHHHHHHHhhh
Confidence 3899999999996 8888888889999999999999999999974
No 51
>PF10741 T2SM_b: Type II secretion system (T2SS), protein M subtype b; InterPro: IPR007690 General secretion pathway (GSP) protein M is a membrane protein involved in the export of proteins in bacteria. It consists of a short cytosolic N-terminal domain, a transmembrane domain, and a C-terminal periplasmic domain. The precise function of this protein is unknown, though in Vibrio cholerae, the EpsM protein interacts with the EpsL protein, and also forms homodimers [],; GO: 0006858 extracellular transport
Probab=76.02 E-value=9 Score=28.44 Aligned_cols=61 Identities=16% Similarity=0.123 Sum_probs=46.9
Q ss_pred chhHHHHHHHHhcCCeEEE-EeCC---CC-----cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEEEE
Q 030606 99 FYRNWTIENATQLGLKGWV-RNRR---DG-----SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQVFP 159 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~V-rN~~---DG-----sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei~~ 159 (174)
.....+..++..-|+.=.. +..+ ++ .|.+.++|+-+.+..|+..|+.++|.-.|+++++..
T Consensus 17 ~Lq~~l~~~v~~aG~~v~s~q~~p~~~~~~~~~i~v~~~~~g~~~~L~~~L~~LE~~~P~l~Vd~L~i~~ 86 (110)
T PF10741_consen 17 ALQQRLRALVAAAGGQVSSSQVLPPRPDGNFRRISVRVSLEGDIEALQAFLYALESGRPFLFVDDLSIQP 86 (110)
T ss_pred HHHHHHHHHHHHcCCEEEEEEecCCCCCCcceEEEEEEEEEeCHHHHHHHHHHHhcCCCeEEEeEEEEEe
Confidence 3456677777777765442 2222 22 678888999999999999999999999999999985
No 52
>PF01253 SUI1: Translation initiation factor SUI1; InterPro: IPR001950 In Saccharomyces cerevisiae (Baker's yeast), SUI1 is a translation initiation factor that functions in concert with eIF-2 and the initiator tRNA-Met in directing the ribosome to the proper start site of translation []. SUI1 is a protein of 108 residues. Close homologs of SUI1 have been found [] in mammals, insects and plants. SUI1 is also evolutionary related to hypothetical proteins from Escherichia coli (yciH), Haemophilus influenzae (HI1225) and Methanococcus vannielii.; GO: 0003743 translation initiation factor activity, 0006413 translational initiation; PDB: 2OGH_A 1D1R_A 2IF1_A 2XZN_F 2XZM_F.
Probab=73.81 E-value=15 Score=26.17 Aligned_cols=50 Identities=20% Similarity=0.327 Sum_probs=35.4
Q ss_pred EEEeE-EcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHH
Q 030606 90 VVKGR-VQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEM 139 (174)
Q Consensus 90 ~ItGr-VQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~F 139 (174)
+|+|. ..|+-...++..+..+++..|.|.-.++...+|.+||+- +.|.+|
T Consensus 22 ~V~gl~~~~~d~~~lak~lkk~~ac~~sv~~~~~k~~~I~iQGd~~~~i~~~ 73 (83)
T PF01253_consen 22 IVSGLELFGIDLKELAKELKKKFACGGSVTKDPGKGEEIQIQGDHRDEIKDL 73 (83)
T ss_dssp EEES--STTSHHHHHHHHHHHHHTS-EEEEE-TTTSSEEEEESS-HHHHHHH
T ss_pred EEECCcccccCHHHHHHHHHHhccCceEEeecCCCCCEEEECCcHHHHHHHH
Confidence 46674 378888899999999999999997766534789999995 334443
No 53
>TIGR00119 acolac_sm acetolactate synthase, small subunit. acetohydroxyacid synthase is a synonym.
Probab=73.70 E-value=9.9 Score=30.84 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=39.9
Q ss_pred hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 100 YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 100 FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
=|.-+.++|..++ |.|-.....++.+++.|+++++++|++.++.
T Consensus 96 ~r~~i~~i~~~f~--a~ivdv~~~~~~ie~tG~~~ki~~~~~~l~~ 139 (157)
T TIGR00119 96 GRDEIIRLTNIFR--GRIVDVSPDSYTVEVTGDSDKIDAFLELLRP 139 (157)
T ss_pred CHHHHHHHHHHhC--CEEEEecCCEEEEEEcCCHHHHHHHHHHhhh
Confidence 4899999999986 8888888888999999999999999999974
No 54
>TIGR01159 DRP1 density-regulated protein DRP1. This protein family shows weak but suggestive similarity to translation initiation factor SUI1 and its prokaryotic homologs.
Probab=69.96 E-value=13 Score=30.91 Aligned_cols=56 Identities=16% Similarity=0.194 Sum_probs=43.3
Q ss_pred EEEEeEEc-ccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHHHh
Q 030606 89 VVVKGRVQ-GVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQRCC 144 (174)
Q Consensus 89 i~ItGrVQ-GVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~L~ 144 (174)
-+|+|.-. |+-..-....++.+++-.|.|.-...|.-+|++||+- +.|.+|+...+
T Consensus 105 T~V~GLe~f~idlk~laK~lkkkfacG~SV~k~~~~~~eI~IQGD~~~~v~e~L~~~~ 162 (173)
T TIGR01159 105 TVIKGLETFDIDLKKASKTFAQKFATGCSVSKSVTGKEEIVIQGDVMDDIEDYIHEKW 162 (173)
T ss_pred EEEeCCcCCCcCHHHHHHHHHHHhCCCCccccCCCCCCEEEecCCHHHHHHHHHHHHc
Confidence 35788655 8888899999999999998886655666899999995 55666666555
No 55
>COG0023 SUI1 Translation initiation factor 1 (eIF-1/SUI1) and related proteins [Translation, ribosomal structure and biogenesis]
Probab=67.52 E-value=15 Score=28.36 Aligned_cols=43 Identities=21% Similarity=0.285 Sum_probs=32.2
Q ss_pred EcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 95 VQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 95 VQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
+-++.--.-+..++.+++--|.|++. +|++||+- ..|.+|+..
T Consensus 50 ~~~~dlk~Lak~LKk~cacGGtvk~~-----~IeiQGdhr~~v~~~L~~ 93 (104)
T COG0023 50 LKDIDLKKLAKELKKKCACGGTVKDG-----EIEIQGDHRDKVKELLIK 93 (104)
T ss_pred cchhhHHHHHHHHHHHcCCCceecCC-----EEEEeChHHHHHHHHHHH
Confidence 33455566777888888999999975 89999995 556666655
No 56
>cd00474 SUI1_eIF1 The SUI1/eIF1 (eukaryotic initiation factor 1) fold is found in eukaryotes, archaea, and some bacteria and is thought to play an important role in accurate initiator codon recognition during translation initiation. This fold, which includes two antiparallel alpha helices packed against the same side of a five-strand beta sheet, is structurally similar to other RNA-binding domains suggesting that SUI1/eIF1 may bind RNA. Point mutations in the yeast eIF1 implicate the protein in maintaining accurate start-site selection but its mechanism of action is unknown.
Probab=65.03 E-value=20 Score=25.73 Aligned_cols=47 Identities=17% Similarity=0.187 Sum_probs=33.2
Q ss_pred EEEeE-EcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHH
Q 030606 90 VVKGR-VQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQ 141 (174)
Q Consensus 90 ~ItGr-VQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~ 141 (174)
+|+|- -.++-...++..+..+++..|.|.+ -+|++||+- +.+.+|+.
T Consensus 17 ~I~Gl~~~~~dlk~l~k~lKk~~~cggtv~~-----~~I~lQGD~r~~v~~~L~ 65 (77)
T cd00474 17 TVQGLDLEYADLKKLAKELKKKCACGGTVKD-----EVIELQGDQRKKIKEFLI 65 (77)
T ss_pred EEECCCCchHhHHHHHHHHHHHcCCCcEEec-----CEEEEeCcHHHHHHHHHH
Confidence 35553 3334567888899999999999996 379999995 44544443
No 57
>TIGR01158 SUI1_rel translation initation factor SUI1, putative, prokaryotic. This family of archaeal and bacterial proteins is homologous to the eukaryotic translation intiation factor SUI1 involved in directing the ribosome to the proper start site of translation by functioning in concert with eIF-2 and the initiator tRNA-Met.
Probab=61.09 E-value=30 Score=26.13 Aligned_cols=38 Identities=24% Similarity=0.411 Sum_probs=27.9
Q ss_pred hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 100 YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 100 FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
...++..+..++|-.|.|++ + +|++||+- +.+.+|+..
T Consensus 53 l~~l~k~LKk~~gcGgtvk~---~--~IeiQGD~~~~v~~~L~~ 91 (101)
T TIGR01158 53 LKELAKELKSKCGCGGTVKD---G--VIEIQGDHRDRVKDLLEK 91 (101)
T ss_pred HHHHHHHHHHHhcCCeeEeC---C--EEEEeCcHHHHHHHHHHH
Confidence 56677778888899999974 3 68899995 556555544
No 58
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=59.12 E-value=48 Score=29.14 Aligned_cols=63 Identities=13% Similarity=0.076 Sum_probs=52.1
Q ss_pred eEEcccchhHHHHHHHHhcCCeEEEEeC-CCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEE
Q 030606 93 GRVQGVFYRNWTIENATQLGLKGWVRNR-RDGSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGL 155 (174)
Q Consensus 93 GrVQGVGFR~fV~rlA~~LgL~G~VrN~-~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~I 155 (174)
..++---+|.-+..+|.++|+...+++. ..-++-|.+.|....++++++.++.|.-.++|.-|
T Consensus 59 ~~~~~~~L~~~L~~l~~~l~l~i~i~~~~~~~ri~vl~Sg~g~nl~al~~~~~~~~~~~~i~~v 122 (286)
T PRK13011 59 EGLDEDALRAGFAPIAARFGMQWELHDPAARPKVLIMVSKFDHCLNDLLYRWRIGELPMDIVGV 122 (286)
T ss_pred CCCCHHHHHHHHHHHHHHhCcEEEEeecccCceEEEEEcCCcccHHHHHHHHHcCCCCcEEEEE
Confidence 3456678899999999999999999976 33478888899999999999999988766777665
No 59
>PRK09019 translation initiation factor Sui1; Validated
Probab=58.59 E-value=30 Score=26.80 Aligned_cols=43 Identities=21% Similarity=0.347 Sum_probs=32.2
Q ss_pred Ecccc-----hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 95 VQGVF-----YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 95 VQGVG-----FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
|+|.. ....++.+-.++|.-|.|++ | +|++||+- +.+.+|+..
T Consensus 50 I~Gl~~~~~dlk~l~K~lKkk~gcGGtvk~---~--~IelQGD~r~~v~~~L~~ 98 (108)
T PRK09019 50 ITGLDLDDAELKKLAAELKKKCGCGGAVKD---G--VIEIQGDKRDLLKSLLEA 98 (108)
T ss_pred EeCCcCCHHHHHHHHHHHHHHhcCCCeEEc---C--EEEEcCcHHHHHHHHHHH
Confidence 66664 57778888888999999995 3 49999996 556665543
No 60
>PRK00939 translation initiation factor Sui1; Reviewed
Probab=56.36 E-value=38 Score=25.60 Aligned_cols=42 Identities=19% Similarity=0.339 Sum_probs=30.7
Q ss_pred cccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 96 QGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 96 QGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
.+.-...+...+..++|-.|.|++ | +|++||+- +.+.+|+..
T Consensus 48 ~~~~lk~l~k~lKk~~gcGgsvk~---~--~I~iQGD~r~~v~~~L~~ 90 (99)
T PRK00939 48 KDIDLKELAKKLKSKLACGGTVKD---G--RIELQGDHRERVKELLIK 90 (99)
T ss_pred cchhHHHHHHHHHHHhCCCceEEC---C--EEEEeCcHHHHHHHHHHH
Confidence 344467888888899999999973 4 49999995 556555543
No 61
>PRK00142 putative rhodanese-related sulfurtransferase; Provisional
Probab=55.62 E-value=84 Score=27.90 Aligned_cols=53 Identities=21% Similarity=0.297 Sum_probs=45.3
Q ss_pred chhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEE
Q 030606 99 FYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVV 152 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V 152 (174)
-||......+..+++.|.+.-...| |-..+.|+.+.++.|..|+...|..+.+
T Consensus 20 ~~~~~l~~~~~~~d~rg~i~~a~eg-Ingtis~~~~~~~~~~~~l~~~~~~~~i 72 (314)
T PRK00142 20 AFRDEHLALCKSLGLKGRILVAEEG-INGTVSGTIEQTEAYMAWLKADPRFADI 72 (314)
T ss_pred HHHHHHHHHHHHcCCeeEEEEcCCC-ceEEEEecHHHHHHHHHHHhhCcCCCCc
Confidence 5788899999999999999999998 8889999999999999999875544433
No 62
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=53.15 E-value=54 Score=28.74 Aligned_cols=69 Identities=12% Similarity=0.009 Sum_probs=53.5
Q ss_pred EEEEEEeEE----cc-cchhHHHHHHHHhcCCeEEEEeCCCC-cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEE
Q 030606 87 VRVVVKGRV----QG-VFYRNWTIENATQLGLKGWVRNRRDG-SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGL 155 (174)
Q Consensus 87 ~~i~ItGrV----QG-VGFR~fV~rlA~~LgL~G~VrN~~DG-sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~I 155 (174)
..+++...+ .. --++.-+..++.++++...+.|...- ++-|.+.|+...++++++.++.|.-.++|.-|
T Consensus 48 F~m~i~v~~~~~~~~~~~L~~~L~~l~~~l~l~i~l~~~~~~~ri~vl~Sg~gsnl~al~~~~~~~~~~~~i~~v 122 (286)
T PRK06027 48 FFMRVEFEGDGLIFNLETLRADFAALAEEFEMDWRLLDSAERKRVVILVSKEDHCLGDLLWRWRSGELPVEIAAV 122 (286)
T ss_pred EEEEEEEEeCCCCCCHHHHHHHHHHHHHHhCCEEEEcccccCcEEEEEEcCCCCCHHHHHHHHHcCCCCcEEEEE
Confidence 444555555 22 24788889999999999999988543 78888889999999999999987656777665
No 63
>COG3790 Predicted membrane protein [Function unknown]
Probab=52.57 E-value=3.2 Score=31.69 Aligned_cols=12 Identities=33% Similarity=0.573 Sum_probs=10.0
Q ss_pred EeEEcccchhHH
Q 030606 92 KGRVQGVFYRNW 103 (174)
Q Consensus 92 tGrVQGVGFR~f 103 (174)
.|.|.|||||+-
T Consensus 60 a~~IhGVGFrpr 71 (97)
T COG3790 60 AGVIHGVGFRPR 71 (97)
T ss_pred HHHHhcccCchH
Confidence 578999999973
No 64
>PRK06824 translation initiation factor Sui1; Validated
Probab=49.79 E-value=39 Score=26.53 Aligned_cols=43 Identities=16% Similarity=0.244 Sum_probs=31.1
Q ss_pred Ecccc-----hhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCH-HhHHHHHHH
Q 030606 95 VQGVF-----YRNWTIENATQLGLKGWVRNRRDGSVEALFSGNP-DSVKEMEQR 142 (174)
Q Consensus 95 VQGVG-----FR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~e-e~Ie~Fi~~ 142 (174)
|+|.. +...++.+-.++|.-|.|++ + +|++||+- +.+.+|+..
T Consensus 60 I~Gl~~~~~dlk~l~K~LKkk~gcGGtvkd---~--~IeiQGD~r~~v~~~L~~ 108 (118)
T PRK06824 60 ITGVPLAEDALKELAKELKRRCGTGGTLKD---G--VIEIQGDHVELLLAELLK 108 (118)
T ss_pred EeCCcCCHHHHHHHHHHHHHHhcCCceEec---C--EEEEcCcHHHHHHHHHHH
Confidence 67764 45667777778899999985 4 69999996 556665544
No 65
>PF12123 Amidase02_C: N-acetylmuramoyl-l-alanine amidase; InterPro: IPR021976 This domain is found in bacteria and viruses. This domain is about 50 amino acids in length. This domain is classified with the enzyme classification code 3.5.1.28 from EC. This domain is the C-terminal of the enzyme which hydrolyses the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides. ; PDB: 2L48_B.
Probab=48.16 E-value=66 Score=21.27 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=23.3
Q ss_pred hcCCeEEEEeCC-CCcEEEEEEc-CHHhHHHHHHHHhc
Q 030606 110 QLGLKGWVRNRR-DGSVEALFSG-NPDSVKEMEQRCCH 145 (174)
Q Consensus 110 ~LgL~G~VrN~~-DGsVEI~aeG-~ee~Ie~Fi~~L~~ 145 (174)
++|.+|-|.-.+ ||-+.++-.+ +..++++|..|+..
T Consensus 1 ~l~~~~ki~~~~~~Gl~y~vT~~~s~~~L~k~~~wld~ 38 (45)
T PF12123_consen 1 SLGMTAKIIFQSKDGLPYFVTDPLSDAELDKFTAWLDE 38 (45)
T ss_dssp HTT--EEEEE-T-TS-EEEEE----HHHHHHHHHHHHH
T ss_pred CCccEEEEEEecCCCcEEEEeCCCCHHHHHHHHHHHHh
Confidence 478889987777 9977776666 46889999999964
No 66
>PF05798 Phage_FRD3: Bacteriophage FRD3 protein; InterPro: IPR008765 This is a group of proteins of unknown function from bacteriophage T2 and related phage.
Probab=48.13 E-value=33 Score=24.99 Aligned_cols=27 Identities=7% Similarity=0.215 Sum_probs=23.3
Q ss_pred EEEeCCCCcEEEEEEcCHHhHHHHHHH
Q 030606 116 WVRNRRDGSVEALFSGNPDSVKEMEQR 142 (174)
Q Consensus 116 ~VrN~~DGsVEI~aeG~ee~Ie~Fi~~ 142 (174)
.+++.+.-+++|++||+-+++..|...
T Consensus 29 si~d~~f~~~~i~i~GPle~l~~FM~n 55 (75)
T PF05798_consen 29 SIQDSKFCSIQIVIEGPLEDLTRFMAN 55 (75)
T ss_pred EeecCCcceEEEEEeccHHHHHHHHHH
Confidence 478888889999999999999998654
No 67
>PF02641 DUF190: Uncharacterized ACR, COG1993; InterPro: IPR003793 This is an uncharacterised domain found in proteins of unknown function.; PDB: 2DCL_C 1O51_A.
Probab=46.35 E-value=1.2e+02 Score=22.39 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=43.4
Q ss_pred EEcccchhHHHHHHHHhcCCeEEE-EeC------------------CCC-cEEEEEEcCHHhHHHHHHHHhcCC--CCeE
Q 030606 94 RVQGVFYRNWTIENATQLGLKGWV-RNR------------------RDG-SVEALFSGNPDSVKEMEQRCCHGP--SDAV 151 (174)
Q Consensus 94 rVQGVGFR~fV~rlA~~LgL~G~V-rN~------------------~DG-sVEI~aeG~ee~Ie~Fi~~L~~gP--p~A~ 151 (174)
+.+|--.=.|+.+.|+++|+.|.. ..- ++. -|.|++-.+++++++|+..++.-- ...-
T Consensus 15 ~~~g~~l~~~ll~~~~~~gi~GaTV~rgi~G~G~~~~ih~~~~~~l~~~lPvvIe~id~~eki~~~l~~l~~~~~~glit 94 (101)
T PF02641_consen 15 RWGGKPLYEWLLERAREAGIAGATVFRGIEGFGSSGRIHSARLLELSDDLPVVIEFIDTEEKIEAFLPELKELVKDGLIT 94 (101)
T ss_dssp EETTEEHHHHHHHHHHHTT-SEEEEEE-SEEEE-------------TTS-EEEEEEEEEHHHHHHHHHHHCTT-SSSEEE
T ss_pred ccCceEHHHHHHHHHHHCCCCeEEEEcceeeeCCCCcccccchhhhcCCCCEEEEEEcCHHHHHHHHHHHHHHcCCCEEE
Confidence 577888889999999999999873 221 111 456666688999999999998643 3344
Q ss_pred EEEEE
Q 030606 152 VTGLQ 156 (174)
Q Consensus 152 V~~Ie 156 (174)
++.|+
T Consensus 95 ~~~v~ 99 (101)
T PF02641_consen 95 LEDVE 99 (101)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 68
>PF14528 LAGLIDADG_3: LAGLIDADG-like domain; PDB: 2CW7_A 2CW8_A 2VS8_F 2VS7_G 1B24_A 1DQ3_A 2DCH_X.
Probab=45.95 E-value=91 Score=21.01 Aligned_cols=44 Identities=23% Similarity=0.242 Sum_probs=29.3
Q ss_pred cchhHHHHHHHHhcCCeEEEE--eCCCCcEEEEEEcCHHhHHHHHHHH
Q 030606 98 VFYRNWTIENATQLGLKGWVR--NRRDGSVEALFSGNPDSVKEMEQRC 143 (174)
Q Consensus 98 VGFR~fV~rlA~~LgL~G~Vr--N~~DGsVEI~aeG~ee~Ie~Fi~~L 143 (174)
--+...++.+..++|+...+. ...++.-++.+.| +++..|.+.+
T Consensus 31 ~~ll~~v~~lL~~lGi~~~i~~~~~~~~~y~l~i~~--~~~~~f~~~I 76 (77)
T PF14528_consen 31 KELLEDVQKLLLRLGIKASIYEKKRKKGSYRLRISG--KSLKRFLEKI 76 (77)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEECTTTEEEEEEEC--HHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCeeEEEEEcCCCceEEEEECc--hHHHHHHHHh
Confidence 356777888888889998876 3445556677777 5567777654
No 69
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=44.59 E-value=1.1e+02 Score=26.93 Aligned_cols=58 Identities=14% Similarity=0.124 Sum_probs=47.9
Q ss_pred cchhHHHHHHHHhcCCeEEEEeCCCC-cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEE
Q 030606 98 VFYRNWTIENATQLGLKGWVRNRRDG-SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGL 155 (174)
Q Consensus 98 VGFR~fV~rlA~~LgL~G~VrN~~DG-sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~I 155 (174)
--+|.-+..+|.++|+.=.+++..+- ++-|.+.|....++++++.++.|.-.++|.-|
T Consensus 68 ~~l~~~l~~l~~~l~l~~~i~~~~~~~kiavl~Sg~g~nl~al~~~~~~~~l~~~i~~v 126 (289)
T PRK13010 68 DTFRQEFQPVAEKFDMQWAIHPDGQRPKVVIMVSKFDHCLNDLLYRWRMGELDMDIVGI 126 (289)
T ss_pred HHHHHHHHHHHHHhCCeEEEecCCCCeEEEEEEeCCCccHHHHHHHHHCCCCCcEEEEE
Confidence 45777888999999999888877443 78888999999999999999988766777655
No 70
>PRK13562 acetolactate synthase 1 regulatory subunit; Provisional
Probab=44.22 E-value=61 Score=24.06 Aligned_cols=62 Identities=10% Similarity=0.049 Sum_probs=39.6
Q ss_pred ccchhHHHHHHHHhcCCeEEE-EeCCC-C--cEEEEEE-cCHHhHHHHHHHHhcCCCCeEEEEEEEE
Q 030606 97 GVFYRNWTIENATQLGLKGWV-RNRRD-G--SVEALFS-GNPDSVKEMEQRCCHGPSDAVVTGLQVF 158 (174)
Q Consensus 97 GVGFR~fV~rlA~~LgL~G~V-rN~~D-G--sVEI~ae-G~ee~Ie~Fi~~L~~gPp~A~V~~Iei~ 158 (174)
||--|-.-.=-.+.++|.--. --..+ | ++.|++. |+++.+++..+.|.+-..-.+|.+++..
T Consensus 14 GVL~Rit~lFsRRg~NI~SLtvg~Te~~~iSRmtivv~~~d~~~ieqI~kQL~KlidVikV~~~~~~ 80 (84)
T PRK13562 14 STLNRITSAFVRLQYNIDTLHVTHSEQPGISNMEIQVDIQDDTSLHILIKKLKQQINVLTVECYDLV 80 (84)
T ss_pred CHHHHHHHHHhccCcCeeeEEecccCCCCceEEEEEEeCCCHHHHHHHHHHHhCCccEEEEEEeecc
Confidence 444443333334455665542 22222 2 8889997 9999999999999887766666655544
No 71
>PF05137 PilN: Fimbrial assembly protein (PilN); InterPro: IPR007813 PilN is a plasmid-encoded, lipoprotein which locates to the outer membrane of bacteria and are part of a thin pilus required only for liquid mating [].
Probab=43.89 E-value=97 Score=20.70 Aligned_cols=69 Identities=12% Similarity=0.059 Sum_probs=42.0
Q ss_pred HHHHHhcCCeEEEEeC--CCCcEEEEEEc-CHHhHHHHHHHHhcCCCC--eEEEEEEEEEcCCCCCCCcEEeec
Q 030606 105 IENATQLGLKGWVRNR--RDGSVEALFSG-NPDSVKEMEQRCCHGPSD--AVVTGLQVFPSNDDPGTGFVRKQT 173 (174)
Q Consensus 105 ~rlA~~LgL~G~VrN~--~DGsVEI~aeG-~ee~Ie~Fi~~L~~gPp~--A~V~~Iei~~~e~~~~~~FeIr~t 173 (174)
..++..+-=.-|+... .++.|.|.-.. +...+.+|+..|++.|-. +.+.++.....+..+...|+|.-+
T Consensus 4 ~~L~~~~P~~v~l~~l~~~~~~l~i~G~a~~~~~v~~f~~~L~~~~~f~~v~l~~~~~~~~~~~~~~~F~i~~~ 77 (78)
T PF05137_consen 4 DELARALPEGVWLTSLSINGNTLSISGYADSYQSVAAFLRNLEQSPFFSDVSLSSISRQEGDGNSLVSFTITAK 77 (78)
T ss_pred HHHHhhCCCCEEEEEEEEeCCEEEEEEEECCHHHHHHHHHHHhhCCCccceEEEEEEeeccCCCceEEEEEEEE
Confidence 3445555444454333 44456665444 468899999999987754 455566555544445667888643
No 72
>PF09875 DUF2102: Uncharacterized protein conserved in archaea (DUF2102); InterPro: IPR012025 The exact functionof this protein unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=40.78 E-value=1.1e+02 Score=23.71 Aligned_cols=43 Identities=16% Similarity=0.245 Sum_probs=34.4
Q ss_pred HHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc-CCCC
Q 030606 104 TIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH-GPSD 149 (174)
Q Consensus 104 V~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~-gPp~ 149 (174)
+.+.+.+++..=.||.+.-| +.++|+++.|+.+++.+++ .|..
T Consensus 15 l~~~~~~~~~~v~iKETCFG---~~i~Ge~e~V~~~i~~iR~ld~~~ 58 (104)
T PF09875_consen 15 LAMKLYELSLPVTIKETCFG---AMIEGEEEEVDKVIEEIRKLDPNH 58 (104)
T ss_pred HHHHHHhcCCCceeeeccee---eEEECCHHHHHHHHHHHHhhCCCc
Confidence 45566677777678888888 8889999999999999986 4543
No 73
>COG0440 IlvH Acetolactate synthase, small (regulatory) subunit [Amino acid transport and metabolism]
Probab=38.78 E-value=2e+02 Score=23.90 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=42.6
Q ss_pred eEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHh
Q 030606 85 KTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCC 144 (174)
Q Consensus 85 ~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~ 144 (174)
.+--..|+=.-.|.- |.=+.++|.-+. |.+-.....++.+++.|+++++++|++.++
T Consensus 85 eRel~LiKv~~~~~~-R~ei~~~~~ifr--~~vvDvs~~~~~~eltG~~~ki~afi~~l~ 141 (163)
T COG0440 85 ERELALIKVSAEGSE-RGEIARITEIFR--ASVVDVSPESLTIELTGDEEKIEAFIRLLR 141 (163)
T ss_pred heeeEEEEEecCccc-hHHHHHHHHHhC--ceEEecCcceEEEEEeCChHHHHHHHHHhc
Confidence 343444443334444 666778777766 788777777899999999999999999998
No 74
>PF09600 Cyd_oper_YbgE: Cyd operon protein YbgE (Cyd_oper_YbgE); InterPro: IPR011846 This entry describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria [].
Probab=37.49 E-value=8 Score=28.52 Aligned_cols=12 Identities=33% Similarity=0.584 Sum_probs=10.0
Q ss_pred EeEEcccchhHH
Q 030606 92 KGRVQGVFYRNW 103 (174)
Q Consensus 92 tGrVQGVGFR~f 103 (174)
.|-|.|||||+-
T Consensus 45 ~~~IhGvGF~Pr 56 (82)
T PF09600_consen 45 AGWIHGVGFRPR 56 (82)
T ss_pred HHHhhccccchh
Confidence 578999999874
No 75
>TIGR02112 cyd_oper_ybgE cyd operon protein YbgE. This model describes a small protein of unknown function, about 100 amino acids in length, essentially always found in an operon with CydAB, subunits of the cytochrome d terminal oxidase. It appears to be an integral membrane protein. It is found so far only in the Proteobacteria.
Probab=35.85 E-value=7.3 Score=29.49 Aligned_cols=12 Identities=25% Similarity=0.232 Sum_probs=10.0
Q ss_pred EeEEcccchhHH
Q 030606 92 KGRVQGVFYRNW 103 (174)
Q Consensus 92 tGrVQGVGFR~f 103 (174)
.|.|.||||||-
T Consensus 56 ~g~IhGVGF~Pr 67 (93)
T TIGR02112 56 ILWIHGVGFRPR 67 (93)
T ss_pred HHHHhhccccch
Confidence 578999999873
No 76
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=35.29 E-value=1.6e+02 Score=20.85 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=46.5
Q ss_pred EcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhcCCCCeEE
Q 030606 95 VQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCHGPSDAVV 152 (174)
Q Consensus 95 VQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V 152 (174)
|=-+||=.-+...-.+.+++=--+...-.++.+.+.|+.+.++.....|++.=|.|.|
T Consensus 12 vG~~g~d~~i~~~l~~~~v~ii~K~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a~i 69 (71)
T cd04910 12 VGEVGYDLEILELLQRFKVSIIAKDTNANTITHYLAGSLKTIKRLTEDLENRFPNAEI 69 (71)
T ss_pred cCChhHHHHHHHHHHHcCCeEEEEecCCCeEEEEEEcCHHHHHHHHHHHHHhCccCcc
Confidence 4446788888888888888766677767789999999999999999999876446665
No 77
>KOG1770 consensus Translation initiation factor 1 (eIF-1/SUI1) [Translation, ribosomal structure and biogenesis]
Probab=34.82 E-value=2.2e+02 Score=22.31 Aligned_cols=56 Identities=18% Similarity=0.230 Sum_probs=39.7
Q ss_pred EEEEEEE---e-----EEcccchhHH----HHHHHHhcCCeEEEEeCC-CCcEEEEEEcC-HHhHHHHHHH
Q 030606 86 TVRVVVK---G-----RVQGVFYRNW----TIENATQLGLKGWVRNRR-DGSVEALFSGN-PDSVKEMEQR 142 (174)
Q Consensus 86 r~~i~It---G-----rVQGVGFR~f----V~rlA~~LgL~G~VrN~~-DGsVEI~aeG~-ee~Ie~Fi~~ 142 (174)
-++|+|. | .|||++--+- +..+-++++..|.|--.+ -|+| |.+||+ ...+-.|+-.
T Consensus 29 ~ihIRIQQRnGrKtlTtVQgi~~Eyd~kril~~lKKef~CnGtvved~e~gev-IQLqGDqR~nv~~fl~~ 98 (112)
T KOG1770|consen 29 YIHIRIQQRNGRKTLTTVQGIPMEYDLKKILKSLKKEFACNGTVVEDPEYGEV-IQLQGDQRKNVCQFLVQ 98 (112)
T ss_pred eEEEEEEeeCCceEEEEecCChhhhhHHHHHHHHHHhccCCCeEecCcccCce-EEeccchhhhHHHHHHH
Confidence 5566663 3 3999986554 666778889999986665 4655 899999 6667766544
No 78
>COG0404 GcvT Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]
Probab=34.40 E-value=3.4e+02 Score=25.03 Aligned_cols=85 Identities=7% Similarity=-0.058 Sum_probs=47.8
Q ss_pred EEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcCHH--hHHHHHHHHh-cCCCCeEEEE--------
Q 030606 86 TVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGNPD--SVKEMEQRCC-HGPSDAVVTG-------- 154 (174)
Q Consensus 86 r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee--~Ie~Fi~~L~-~gPp~A~V~~-------- 154 (174)
++.+...+--..--++++-++++. .+++=++.+..+.-..+.+||++. .++++...-. ..=+...+.+
T Consensus 111 ~f~lv~~a~~~~~~~~~l~~~~~~-~~~~v~~~~~t~~~~~lalqGPkAr~il~~~~~~~~~~~l~~~~~~~~~i~g~~~ 189 (379)
T COG0404 111 RFFLVTNAATAEKDLAWLERHQAG-PDLDVTLTSVTEDLAVLALQGPKAREVLAKLVDGDLVEALPFFAFKEVTIGGGVP 189 (379)
T ss_pred eEEEEeCccchHHHHHHHHHhhcc-CCcceEEeeccccEEEEEEECcCHHHHHHHhccccccccCCceEEEEEEecCCce
Confidence 444555544555556666654444 566767777666778899999863 3444433211 1212222222
Q ss_pred EEEEEcCCCCCCCcEEe
Q 030606 155 LQVFPSNDDPGTGFVRK 171 (174)
Q Consensus 155 Iei~~~e~~~~~~FeIr 171 (174)
+.+......+..+|||-
T Consensus 190 ~~i~R~gyTGE~G~Ei~ 206 (379)
T COG0404 190 VRISRTGYTGELGFEIY 206 (379)
T ss_pred EEEEeccccCCCeEEEE
Confidence 34444556777899985
No 79
>PRK10588 hypothetical protein; Provisional
Probab=32.21 E-value=10 Score=28.95 Aligned_cols=12 Identities=33% Similarity=0.542 Sum_probs=10.0
Q ss_pred EeEEcccchhHH
Q 030606 92 KGRVQGVFYRNW 103 (174)
Q Consensus 92 tGrVQGVGFR~f 103 (174)
.|-|.||||||-
T Consensus 60 ~g~IhGVGF~Pr 71 (97)
T PRK10588 60 AGVIHGVGFRPQ 71 (97)
T ss_pred HHHhhhcccchh
Confidence 578999999873
No 80
>PLN02828 formyltetrahydrofolate deformylase
Probab=31.99 E-value=1.8e+02 Score=25.53 Aligned_cols=59 Identities=12% Similarity=-0.032 Sum_probs=44.2
Q ss_pred chhHHHHHHHHhcCCeEEEEeCCCC----cEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEEEE
Q 030606 99 FYRNWTIENATQLGLKGWVRNRRDG----SVEALFSGNPDSVKEMEQRCCHGPSDAVVTGLQV 157 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~VrN~~DG----sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~Iei 157 (174)
.+|.-...+|.+++...|-....+. +|-|.+.|....+++++..++.|.-.++|.-|-.
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~riavlvSg~g~nl~~ll~~~~~g~l~~eI~~ViS 105 (268)
T PLN02828 43 QMDEDFQEISKHFKALKSVVRVPGLDPKYKIAVLASKQDHCLIDLLHRWQDGRLPVDITCVIS 105 (268)
T ss_pred HHHHHHHHHHHhcCCcceEEEEccCCCCcEEEEEEcCCChhHHHHHHhhhcCCCCceEEEEEe
Confidence 4566667899999986533333222 7888999999999999999998876688876643
No 81
>KOG2769 consensus Putative u4/u6 small nuclear ribonucleoprotein [RNA processing and modification]
Probab=30.97 E-value=70 Score=30.99 Aligned_cols=46 Identities=28% Similarity=0.270 Sum_probs=32.5
Q ss_pred EcccchhHHHHHHHHhcCCeEEE-EeCCCCcEEEEEEcCHHhHHHHHHH
Q 030606 95 VQGVFYRNWTIENATQLGLKGWV-RNRRDGSVEALFSGNPDSVKEMEQR 142 (174)
Q Consensus 95 VQGVGFR~fV~rlA~~LgL~G~V-rN~~DGsVEI~aeG~ee~Ie~Fi~~ 142 (174)
.|.=-=|.-|..-|.+++|+|.+ .+.+.+ | |+|+|-+.++..+...
T Consensus 399 l~~p~~rFKve~NAkql~ltG~~vl~~d~~-v-vVvEGg~Ka~KkykrL 445 (522)
T KOG2769|consen 399 LQNPKKRFKVEMNAKQLQLTGVCVLHRDMN-V-VVVEGGPKAQKKYKRL 445 (522)
T ss_pred ccCCccceeeeechhhhceeeeEEEecCCc-E-EEEecCHHHHHHHHHH
Confidence 45555566677889999999996 555554 6 4557888888776443
No 82
>PRK06737 acetolactate synthase 1 regulatory subunit; Validated
Probab=29.76 E-value=1.2e+02 Score=21.92 Aligned_cols=57 Identities=12% Similarity=-0.018 Sum_probs=34.8
Q ss_pred ccchhHHHHHHHHhcCCeEEEEe-CCC-C--cEEEEEEcCHHhHHHHHHHHhcCCCCeEEE
Q 030606 97 GVFYRNWTIENATQLGLKGWVRN-RRD-G--SVEALFSGNPDSVKEMEQRCCHGPSDAVVT 153 (174)
Q Consensus 97 GVGFR~fV~rlA~~LgL~G~VrN-~~D-G--sVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~ 153 (174)
||=-|-.-.=..+.++|..-... ..+ | ++.|++.|+++.+++..+.|.+-..-.+|.
T Consensus 14 GVL~Ri~~lf~rRgfNI~Sl~vg~te~~~~sriti~~~~~~~~i~qi~kQL~KLidV~~V~ 74 (76)
T PRK06737 14 SVLLRISGIFARRGYYISSLNLNERDTSGVSEMKLTAVCTENEATLLVSQLKKLINVLQVN 74 (76)
T ss_pred CHHHHHHHHHhccCcceEEEEecccCCCCeeEEEEEEECCHHHHHHHHHHHhCCcCEEEEE
Confidence 44444333333445566555332 222 3 667888999999999999998766544443
No 83
>PF13310 Virulence_RhuM: Virulence protein RhuM family
Probab=28.11 E-value=16 Score=32.41 Aligned_cols=44 Identities=23% Similarity=0.458 Sum_probs=33.1
Q ss_pred cccchhHHHHHHHHhcCCeEEEEeC---CCCcEEEEEEcCHHhHHHHHHHHh
Q 030606 96 QGVFYRNWTIENATQLGLKGWVRNR---RDGSVEALFSGNPDSVKEMEQRCC 144 (174)
Q Consensus 96 QGVGFR~fV~rlA~~LgL~G~VrN~---~DGsVEI~aeG~ee~Ie~Fi~~L~ 144 (174)
+|+-||.|.-+.-+++=++|||.|. .++. ....+-.+++++.++
T Consensus 41 ~~tqFR~WAt~~Lkey~~KGf~~d~erLk~~~-----~~~~dyf~ell~rIr 87 (260)
T PF13310_consen 41 RGTQFRQWATKVLKEYLIKGFVLDDERLKNGG-----VFGKDYFDELLERIR 87 (260)
T ss_pred HHhHHHHHHHHhHHHHHHhhhhhhHHHHHccC-----cccHHHHHHHHHHHH
Confidence 7899999999999999999999985 3341 123555666666654
No 84
>PRK06195 DNA polymerase III subunit epsilon; Validated
Probab=28.10 E-value=1.9e+02 Score=25.34 Aligned_cols=47 Identities=21% Similarity=0.219 Sum_probs=39.9
Q ss_pred CceEEEEEEEeEEcccchhHHHHHHHHhcCCeEEEEeCCCCcEEEEEEcC
Q 030606 83 PAKTVRVVVKGRVQGVFYRNWTIENATQLGLKGWVRNRRDGSVEALFSGN 132 (174)
Q Consensus 83 ~~~r~~i~ItGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DGsVEI~aeG~ 132 (174)
......+.++|..++.- |.=+.+++.++| |.|.+.-....-.+|.|+
T Consensus 220 ~l~g~~~vfTG~l~~~~-R~~~~~~~~~~G--g~v~~sVs~~t~~lV~G~ 266 (309)
T PRK06195 220 AFKEEVVVFTGGLASMT-RDEAMILVRRLG--GTVGSSVTKKTTYLVTNT 266 (309)
T ss_pred cccCCEEEEccccCCCC-HHHHHHHHHHhC--CEecCCcccCceEEEECC
Confidence 46678899999997765 999999999999 889888777788888885
No 85
>COG0097 RplF Ribosomal protein L6P/L9E [Translation, ribosomal structure and biogenesis]
Probab=27.19 E-value=31 Score=28.94 Aligned_cols=51 Identities=24% Similarity=0.369 Sum_probs=30.0
Q ss_pred EEcccchhHHHHHHHHhcCCeEE----EEeCCCC-------cEEEEEEc-CHHhHHHHHHHHhc
Q 030606 94 RVQGVFYRNWTIENATQLGLKGW----VRNRRDG-------SVEALFSG-NPDSVKEMEQRCCH 145 (174)
Q Consensus 94 rVQGVGFR~fV~rlA~~LgL~G~----VrN~~DG-------sVEI~aeG-~ee~Ie~Fi~~L~~ 145 (174)
++.|||||.-+.....+|.| |+ ....++| .-+|.++| +.+++-+|-+.+++
T Consensus 88 ~ivgvgyra~v~g~~l~l~L-G~shp~~~~ip~gi~v~v~~~t~I~v~GidKe~VGQ~AA~Ir~ 150 (178)
T COG0097 88 EIVGVGYRAQVVGGNLELFL-GYSHPVVIEIPEGITVEVPGPTEIVVEGIDKELVGQVAANIRA 150 (178)
T ss_pred EEEEecceeEEeccEEEEee-cccCCeEEECCCCeEEEecCCCEEEEEcCCHHHHhHHHHHHHh
Confidence 46789999888443322222 22 2233455 13455566 45788899888874
No 86
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=26.34 E-value=3.3e+02 Score=23.85 Aligned_cols=57 Identities=14% Similarity=0.007 Sum_probs=45.7
Q ss_pred chhHHHHH-HHHhcCCeEEEEeCCC-CcEEEEEEcCHHhHHHHHHHHhcCCCCeEEEEE
Q 030606 99 FYRNWTIE-NATQLGLKGWVRNRRD-GSVEALFSGNPDSVKEMEQRCCHGPSDAVVTGL 155 (174)
Q Consensus 99 GFR~fV~r-lA~~LgL~G~VrN~~D-GsVEI~aeG~ee~Ie~Fi~~L~~gPp~A~V~~I 155 (174)
-+|.-+.. +|.++|++=.+.+.+. =++-|.+.|....++++++.++.|.-.++|.-|
T Consensus 59 ~l~~~l~~~~~~~~~l~i~l~~~~~~~ki~vl~Sg~g~nl~~l~~~~~~g~l~~~i~~v 117 (280)
T TIGR00655 59 SLLAAFKSALAEKFEMTWELILADKLKRVAILVSKEDHCLGDLLWRWYSGELDAEIALV 117 (280)
T ss_pred HHHHHHHHHHHHHhCCEEEEecCCCCcEEEEEEcCCChhHHHHHHHHHcCCCCcEEEEE
Confidence 45666777 9999999877776633 378888999999999999999988766887665
No 87
>PF11623 DUF3252: Protein of unknown function (DUF3252); InterPro: IPR021659 This family of proteins has no known function. Some members are annotated as Ssl0352 however this cannot be confirmed. Currently there is no known function. ; PDB: 3C4S_B 2JZ2_A.
Probab=26.33 E-value=76 Score=21.88 Aligned_cols=22 Identities=36% Similarity=0.770 Sum_probs=18.5
Q ss_pred cCCeEEEEeCCCCcEEEEEEcC
Q 030606 111 LGLKGWVRNRRDGSVEALFSGN 132 (174)
Q Consensus 111 LgL~G~VrN~~DGsVEI~aeG~ 132 (174)
++..|.|+-..||.+-+..||-
T Consensus 18 ~~y~G~VQRvsdgkaaVLFEGG 39 (53)
T PF11623_consen 18 YGYEGFVQRVSDGKAAVLFEGG 39 (53)
T ss_dssp TT-EEEEEEEETTEEEEEEEET
T ss_pred chheEEEEEeeCCeEEEEecCC
Confidence 4778999999999999999984
No 88
>PF00381 PTS-HPr: PTS HPr component phosphorylation site; InterPro: IPR005698 The histidine-containing phosphocarrier protein (HPr) is a central component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), which transfers metabolic carbohydrates across the cell membrane in many bacterial species [, ]. PTS catalyses the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. The general mechanism of the PTS is as follows: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred to Enzyme I (EI) of the PTS, which in turn transfers it to the phosphoryl carrier protein (HPr) [, ]. Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease complex (enzymes EII/EIII). HPr [, ] is a small cytoplasmic protein of 70 to 90 amino acid residues. In some bacteria, HPr is a domain in a larger protein that includes a EIII(Fru) (IIA) domain and in some cases also the EI domain. A conserved histidine in the N-terminal section of HPr serves as an acceptor for the phosphoryl group of EI. In the central part of HPr, there is a conserved serine which (in Gram-positive bacteria only) is phosphorylated by an ATP-dependent protein kinase; a process which probably play a regulatory role in sugar transport. The overall architecture of the HPr domain has been described as an open faced beta-sandwich in which a beta-sheet is packed against three alpha-helices. Regulatory phosphorylation at the conserved Ser residue does not appear to induce large structural changes to the HPr domain, in particular in the region of the active site [, ].; GO: 0005351 sugar:hydrogen symporter activity, 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system; PDB: 1TXE_A 1QR5_A 1RZR_S 2NZU_L 2OEN_L 2NZV_L 1Y51_B 1Y4Y_A 1Y50_A 2HPR_A ....
Probab=25.62 E-value=92 Score=21.84 Aligned_cols=50 Identities=16% Similarity=0.244 Sum_probs=31.9
Q ss_pred ccchhHH--HHHHHHhcCCeEEEEeCCC-----------------C-cEEEEEEcCHH--hHHHHHHHHhcC
Q 030606 97 GVFYRNW--TIENATQLGLKGWVRNRRD-----------------G-SVEALFSGNPD--SVKEMEQRCCHG 146 (174)
Q Consensus 97 GVGFR~f--V~rlA~~LgL~G~VrN~~D-----------------G-sVEI~aeG~ee--~Ie~Fi~~L~~g 146 (174)
|.==||- +.++|.+++-.=++.+... | .|+|.++|+++ .++++.+.+++|
T Consensus 13 GlHaRpa~~lv~~a~~~~~~i~i~~~~~~vdakSil~l~~L~~~~G~~i~i~~~G~de~~a~~~i~~~~~~~ 84 (84)
T PF00381_consen 13 GLHARPAAELVQIASKFDSDITIRKGGKTVDAKSILGLMSLGAKKGDEIEIEAEGEDEEEALEAIAEFLESG 84 (84)
T ss_dssp SSSHHHHHHHHHHHHTSSSEEEEEETTEEEETTSHHHHHHHTBSTTEEEEEEEESTTHHHHHHHHHHHHHH-
T ss_pred cccHHHHHHHHHHHhhCCCEEEEEeCceeEecCCHHHHhhhhcCCCCEEEEEEECcCHHHHHHHHHHHHhcC
Confidence 3344443 4577777776666665432 3 68999999864 577777766653
No 89
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=25.45 E-value=92 Score=28.69 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=58.2
Q ss_pred CCCCcccccCCCCCCccccCCCCCCCCC----ceEEEEEEEeEE-cccchh------HHHHHHHHhcCCeEEEEeCCCCc
Q 030606 56 PPPHSFLSPLLRPPPRFLCNMTDTQSPP----AKTVRVVVKGRV-QGVFYR------NWTIENATQLGLKGWVRNRRDGS 124 (174)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~m~~~~~~~----~~r~~i~ItGrV-QGVGFR------~fV~rlA~~LgL~G~VrN~~DGs 124 (174)
.|.|+-+--+...-|-+++=.=+. ++. ....++.+.|.| -||-|+ .-+.+.-+..|=+||+-|++.|
T Consensus 259 kG~g~~Le~l~~tG~DVvgLDWTv-dp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG~~ryI~NLGHG- 336 (359)
T KOG2872|consen 259 KGSGGALEELAQTGYDVVGLDWTV-DPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFGKSRYIANLGHG- 336 (359)
T ss_pred cCcchHHHHHHhcCCcEEeecccc-cHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhCccceEEecCCC-
Confidence 455555555555555555443211 111 113457777765 366665 4567777788999999999999
Q ss_pred EEEEEEcCHHhHHHHHHHHhc
Q 030606 125 VEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 125 VEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
|...-+++.+..|++.+++
T Consensus 337 --i~p~tp~e~v~~f~E~~h~ 355 (359)
T KOG2872|consen 337 --ITPGTPPEHVAHFVEAVHK 355 (359)
T ss_pred --CCCCCCHHHHHHHHHHHHH
Confidence 7777889999999999874
No 90
>TIGR01003 PTS_HPr_family Phosphotransferase System HPr (HPr) Family. The HPr family are bacterial proteins (or domains of proteins) which function in phosphoryl transfer system (PTS) systems. They include energy-coupling components which catalyze sugar uptake via a group translocation mechanism. The functions of most of these proteins are not known, but they presumably function in PTS-related regulatory capacities. All seed members are stand-alone HPr proteins, although the model also recognizes HPr domains of PTS fusion proteins. This family includes the related NPr protein.
Probab=24.97 E-value=2.5e+02 Score=19.75 Aligned_cols=56 Identities=11% Similarity=0.125 Sum_probs=36.0
Q ss_pred eEEEEEEEeEEcccchhHH--HHHHHHhcCCeEEEEeCCC------------------CcEEEEEEcCHH--hHHHHHH
Q 030606 85 KTVRVVVKGRVQGVFYRNW--TIENATQLGLKGWVRNRRD------------------GSVEALFSGNPD--SVKEMEQ 141 (174)
Q Consensus 85 ~r~~i~ItGrVQGVGFR~f--V~rlA~~LgL~G~VrN~~D------------------GsVEI~aeG~ee--~Ie~Fi~ 141 (174)
.+.+++|. .-+|.-=||- +.+.|.++.-+=++.+.+. ..|+|.++|+++ .++++.+
T Consensus 2 ~~~~~~i~-~~~GlHaRpA~~lv~~a~~f~s~I~i~~~~~~~dakSil~ll~Lg~~~G~~i~i~~~G~de~~a~~~l~~ 79 (82)
T TIGR01003 2 LSKEVTII-NKVGLHARPAAILVKLASGFDSEITLTKNGKEVNAKSIMGIMMLGAGQGTEVTVSADGEDEAEALEALAK 79 (82)
T ss_pred ceEEEEEc-CCCcccHHHHHHHHHHHHhCCCEEEEEECCEEEehHhHHHHHhcCCCCCCEEEEEEeCcCHHHHHHHHHH
Confidence 35566666 6677777877 6778888876666655321 268888888753 3444444
No 91
>TIGR03272 methan_mark_6 putative methanogenesis marker protein 6. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=24.87 E-value=2.6e+02 Score=22.57 Aligned_cols=43 Identities=19% Similarity=0.329 Sum_probs=34.8
Q ss_pred HHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc-CCCC
Q 030606 104 TIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH-GPSD 149 (174)
Q Consensus 104 V~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~-gPp~ 149 (174)
+.+.+.+++..=.|+.+.-| ..++|+++.++.+++.+++ .|..
T Consensus 14 l~~~~~~l~~~v~iKETCfG---~~i~G~~e~V~~~v~~iR~ld~~~ 57 (132)
T TIGR03272 14 LVQKLYELELPVTIKETCFG---AIITGPEEEVMKVAERIRELDPNH 57 (132)
T ss_pred HHHHHHhcCCCceeeeeeee---eeeeCCHHHHHHHHHHHHhhCCCc
Confidence 45666777777778888888 7889999999999999986 4643
No 92
>KOG2663 consensus Acetolactate synthase, small subunit [Amino acid transport and metabolism]
Probab=24.11 E-value=1.9e+02 Score=26.25 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=49.1
Q ss_pred CCCCCCceEEEEEEEeEEc---ccchhHHHHHHHHhcCCeEE-EEeCCCC---cEEEEEEcCHHhHHHHHHHHhcCCCCe
Q 030606 78 DTQSPPAKTVRVVVKGRVQ---GVFYRNWTIENATQLGLKGW-VRNRRDG---SVEALFSGNPDSVKEMEQRCCHGPSDA 150 (174)
Q Consensus 78 ~~~~~~~~r~~i~ItGrVQ---GVGFR~fV~rlA~~LgL~G~-VrN~~DG---sVEI~aeG~ee~Ie~Fi~~L~~gPp~A 150 (174)
+|.....+..+=.|.=-|| ||==|--=--.|+.++|..- |.|+.+- +..|+++|.++-+++-.+.|++--+--
T Consensus 67 tP~~~~qr~krHvinclVqnEpGvlsRisGvlAaRGfNIdSLvVc~tevk~LsrmTIVl~Gtd~VveQa~rQiedlVnV~ 146 (309)
T KOG2663|consen 67 TPAPSRQRVKRHVINCLVQNEPGVLSRISGVLAARGFNIDSLVVCLTEVKALSRMTIVLQGTDGVVEQARRQIEDLVNVY 146 (309)
T ss_pred CCccccccccceeEEEEecCCchHHHHHHHHHHhccCCchheeeechhhhhhhhceEEEeccHHHHHHHHHHHHHhhhhh
Confidence 3433323344444555555 55444444445677777776 5666654 578999999999999999998754444
Q ss_pred EEEEE
Q 030606 151 VVTGL 155 (174)
Q Consensus 151 ~V~~I 155 (174)
.|.++
T Consensus 147 aVlDy 151 (309)
T KOG2663|consen 147 AVLDY 151 (309)
T ss_pred eeeec
Confidence 55544
No 93
>PF01336 tRNA_anti-codon: OB-fold nucleic acid binding domain; InterPro: IPR004365 The OB-fold (oligonucleotide/oligosaccharide-binding fold) is found in all three kingdoms and its common architecture presents a binding face that has adapted to bind different ligands. The OB-fold is a five/six-stranded closed beta-barrel formed by 70-80 amino acid residues. The strands are connected by loops of varying length which form the functional appendages of the protein. The majority of OB-fold proteins use the same face for ligand binding or as an active site. Different OB-fold proteins use this 'fold-related binding face' to, variously, bind oligosaccharides, oligonucleotides, proteins, metal ions and catalytic substrates. This entry contains OB-fold domains that bind to nucleic acids []. It includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl-tRNA synthetases (See IPR004364 from INTERPRO). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule 6.1.1 from EC. This domain is found in RecG helicase involved in DNA repair. Replication factor A is a heterotrimeric complex, that contains a subunit in this family [, ]. This domain is also found at the C terminus of bacterial DNA polymerase III alpha chain.; GO: 0003676 nucleic acid binding; PDB: 1BBU_A 1KRS_A 1BBW_A 1KRT_A 1EQR_B 1IL2_B 1C0A_A 3KFU_A 1EOV_A 1ASY_A ....
Probab=23.62 E-value=1.2e+02 Score=19.58 Aligned_cols=18 Identities=22% Similarity=0.276 Sum_probs=8.2
Q ss_pred eEEcccchhHHHHHHHHh
Q 030606 93 GRVQGVFYRNWTIENATQ 110 (174)
Q Consensus 93 GrVQGVGFR~fV~rlA~~ 110 (174)
|.+|-+-|.....+.+..
T Consensus 27 g~i~~~~~~~~~~~~~~~ 44 (75)
T PF01336_consen 27 GSIQVVFFNEEYERFREK 44 (75)
T ss_dssp EEEEEEEETHHHHHHHHT
T ss_pred ccEEEEEccHHhhHHhhc
Confidence 455555555334444433
No 94
>COG1739 Uncharacterized conserved protein [Function unknown]
Probab=22.88 E-value=3.5e+02 Score=22.76 Aligned_cols=42 Identities=10% Similarity=-0.214 Sum_probs=33.2
Q ss_pred HHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 104 TIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 104 V~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
+.++-.+.+..+...+-.+++|.+.+......+++|..|+..
T Consensus 150 l~~~l~~~~~~i~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 191 (203)
T COG1739 150 LERLLKQNDDDVEEARYSGGSVLLTVRFRHIVIEAVSRLLKG 191 (203)
T ss_pred HHHHHHhccceEEEeeecCCeEEEEEEechhhHHHHHHHHhh
Confidence 445555667777777777777999999999999999999874
No 95
>PF09186 DUF1949: Domain of unknown function (DUF1949); InterPro: IPR015269 Members of this entry are a set of functionally uncharacterised hypothetical bacterial proteins. They adopt a ferredoxin-like fold, with a beta-alpha-beta-beta-alpha-beta arrangement []. This entry contains the protein Impact, which is a translational regulator that ensures constant high levels of translation under amino acid starvation. It acts by interacting with Gcn1/Gcn1L1, thereby preventing activation of Gcn2 protein kinases (EIF2AK1 to 4) and subsequent down-regulation of protein synthesis. It is evolutionary conserved from eukaryotes to archaea []. ; PDB: 2CVE_A 1VI7_A.
Probab=22.81 E-value=2e+02 Score=17.87 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=28.4
Q ss_pred HHHHHHhcCCeEEEEeCCCCcEEEEEEcCHHhHHHHHHHHhc
Q 030606 104 TIENATQLGLKGWVRNRRDGSVEALFSGNPDSVKEMEQRCCH 145 (174)
Q Consensus 104 V~rlA~~LgL~G~VrN~~DGsVEI~aeG~ee~Ie~Fi~~L~~ 145 (174)
++++..+.++.=-=..-.+. |.+.+.-+++.++.|.+++.+
T Consensus 11 v~~~l~~~~~~i~~~~y~~~-V~~~v~v~~~~~~~f~~~l~~ 51 (56)
T PF09186_consen 11 VERLLEQNGIEIVDEDYTDD-VTLTVAVPEEEVEEFKAQLTD 51 (56)
T ss_dssp HHHHHHHTTTEEEEEEECTT-EEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEcceecce-EEEEEEECHHHHHHHHHHHHH
Confidence 45566666644333334554 999999999999999988863
No 96
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=22.48 E-value=2.3e+02 Score=27.80 Aligned_cols=109 Identities=18% Similarity=0.293 Sum_probs=74.0
Q ss_pred CcceeeecccccceeeecchhHHHhhcCCCCCCCCCcccc-CCc--cccccCCCCCcccccCCCCCCccccCCCCCCCCC
Q 030606 7 QPTLRFLTSGISKRIIWNTKDAIRTHRLPLRTRSPFRSFH-NPL--SLLFPLPPPHSFLSPLLRPPPRFLCNMTDTQSPP 83 (174)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~ 83 (174)
+=.+|-|||==||- -+|.+.--..|.+ +|..|+-.+. ||+ -|.||=+||-+|+-=-. --.|.-.......
T Consensus 202 ~C~~RvlDsFGTe~-~fn~~~y~~~~~~--~t~~~wG~~~L~~~Qf~TmfPHtpDNTFLGFvv----e~~~~~~~~~~~~ 274 (559)
T PF15024_consen 202 RCRIRVLDSFGTEP-EFNHAEYAQSHGY--KTNNPWGGWNLNPQQFMTMFPHTPDNTFLGFVV----EEHCNKEPVIPRN 274 (559)
T ss_pred ceeEEEeeccCCch-hhcchhhhhhccc--CCCCccccccCCHHHhhccCCCCCCCcceeEEe----ecccccccccccc
Confidence 33578888877764 4677776777777 6777787765 454 47899999999874222 1112111011123
Q ss_pred ceEEEEEEEeEEccc--chhHHHHHHHHhcCCeEEEEeCCC
Q 030606 84 AKTVRVVVKGRVQGV--FYRNWTIENATQLGLKGWVRNRRD 122 (174)
Q Consensus 84 ~~r~~i~ItGrVQGV--GFR~fV~rlA~~LgL~G~VrN~~D 122 (174)
.+.-...|.|+.... |-+.++.-++..+.|.|.|.-..+
T Consensus 275 kr~~~AlVyGK~~~~w~~k~~~l~~l~~~~eih~tV~~~~~ 315 (559)
T PF15024_consen 275 KRKNQALVYGKERYMWKGKEKYLDVLHKYMEIHGTVYDEPQ 315 (559)
T ss_pred cccceeEEEccchhhhcCcHHHHHHHHhhcEEEEEeccCCC
Confidence 345567899999987 778999999999999999965554
No 97
>PTZ00027 60S ribosomal protein L6; Provisional
Probab=22.44 E-value=38 Score=28.27 Aligned_cols=52 Identities=17% Similarity=0.099 Sum_probs=29.5
Q ss_pred EEcccchhHH--HHHHHH------hcCCeEEE-EeCCCC-c--------EEEEEEcC-HHhHHHHHHHHhc
Q 030606 94 RVQGVFYRNW--TIENAT------QLGLKGWV-RNRRDG-S--------VEALFSGN-PDSVKEMEQRCCH 145 (174)
Q Consensus 94 rVQGVGFR~f--V~rlA~------~LgL~G~V-rN~~DG-s--------VEI~aeG~-ee~Ie~Fi~~L~~ 145 (174)
.++|||||.. +...-. .||.+=-+ ...++| . -+|.++|. .+.+-+|.+.+++
T Consensus 92 eivGvGyra~~~v~~~g~~L~l~N~LG~Sh~i~~~iP~gv~v~~~~~~~t~I~i~G~DKq~Vgq~AA~I~~ 162 (190)
T PTZ00027 92 RLVYAHFPINSNITDNGKTIEIRNFLGEKRVRTVKMLPGVVVEKSESVKDEIIVTGADLELVSRSAALIHQ 162 (190)
T ss_pred EEEEeeeeEEEEEcCCCCEEEEEccCCCceeEEEECCCCeEEEeCCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 5789999997 311111 23333222 223433 1 26888895 4678888887754
No 98
>PF10882 bPH_5: Bacterial PH domain; InterPro: IPR020482 This entry contains membrane proteins with no known function.
Probab=22.30 E-value=1.8e+02 Score=20.62 Aligned_cols=35 Identities=20% Similarity=0.218 Sum_probs=22.9
Q ss_pred cCCeEEEEeCCCCcEEEEEEc----------------CHHhHHHHHHHHhc
Q 030606 111 LGLKGWVRNRRDGSVEALFSG----------------NPDSVKEMEQRCCH 145 (174)
Q Consensus 111 LgL~G~VrN~~DGsVEI~aeG----------------~ee~Ie~Fi~~L~~ 145 (174)
.+..|+.+|...|.+.+.+.. ++++.++|++.+++
T Consensus 48 ~~~~G~F~~~~~G~~~~y~t~~~~~i~I~t~~~~y~isp~~~~~fi~~l~~ 98 (100)
T PF10882_consen 48 GYYSGRFRNKGYGKVRLYATRNKNVILIKTKDKTYVISPEDPEEFIEALKK 98 (100)
T ss_pred CccEEEEEeCCCcEEEEEEECCCCEEEEEECCceEEEcCCCHHHHHHHHHh
Confidence 466788888777777666554 34555667776654
No 99
>PF11211 DUF2997: Protein of unknown function (DUF2997); InterPro: IPR021375 This family of proteins has no known function.
Probab=21.64 E-value=1.9e+02 Score=19.05 Aligned_cols=28 Identities=25% Similarity=0.121 Sum_probs=19.6
Q ss_pred EEeCCCCcEEEEEEcC-HHhHHHHHHHHh
Q 030606 117 VRNRRDGSVEALFSGN-PDSVKEMEQRCC 144 (174)
Q Consensus 117 VrN~~DGsVEI~aeG~-ee~Ie~Fi~~L~ 144 (174)
+.-.+||+|++.++|= -.......+.|.
T Consensus 3 ~~I~~dG~V~~~v~G~~G~~C~~~t~~lE 31 (48)
T PF11211_consen 3 FTIYPDGRVEEEVEGFKGSSCLEATAALE 31 (48)
T ss_pred EEECCCcEEEEEEEeccChhHHHHHHHHH
Confidence 3456899999999984 455555555554
No 100
>PLN03014 carbonic anhydrase
Probab=21.59 E-value=1.1e+02 Score=28.36 Aligned_cols=27 Identities=26% Similarity=0.267 Sum_probs=20.9
Q ss_pred HHHHHHHH--hcCCeEEEEeCCCCcEEEE
Q 030606 102 NWTIENAT--QLGLKGWVRNRRDGSVEAL 128 (174)
Q Consensus 102 ~fV~rlA~--~LgL~G~VrN~~DGsVEI~ 128 (174)
++|...-. ++.|.||+.+..+|.|+..
T Consensus 296 P~V~eav~~G~L~I~G~~YDi~TG~V~~l 324 (347)
T PLN03014 296 PFVREGLVKGTLALKGGYYDFVKGAFELW 324 (347)
T ss_pred HHHHHHHHcCCcEEEEEEEECCCceEEEe
Confidence 55555433 3899999999999998876
No 101
>PLN02154 carbonic anhydrase
Probab=21.23 E-value=1.1e+02 Score=27.46 Aligned_cols=27 Identities=22% Similarity=0.426 Sum_probs=21.5
Q ss_pred HHHHHHHH--hcCCeEEEEeCCCCcEEEE
Q 030606 102 NWTIENAT--QLGLKGWVRNRRDGSVEAL 128 (174)
Q Consensus 102 ~fV~rlA~--~LgL~G~VrN~~DGsVEI~ 128 (174)
+|++.... ++.|.||+.+..+|.|+..
T Consensus 242 P~I~e~v~~G~L~IhG~~Ydl~tG~l~~~ 270 (290)
T PLN02154 242 SWIRDRVKRGEVKIHGCYYNLSDCSLEKW 270 (290)
T ss_pred HHHHHHHHCCCcEEEEEEEECCCceEEEe
Confidence 56665544 4899999999999988775
No 102
>PF06610 DUF1144: Protein of unknown function (DUF1144); InterPro: IPR010574 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=21.06 E-value=11 Score=30.67 Aligned_cols=31 Identities=29% Similarity=0.632 Sum_probs=25.6
Q ss_pred EeEEcccchhHHHHHHHHhcCCeEEEEeCCCC
Q 030606 92 KGRVQGVFYRNWTIENATQLGLKGWVRNRRDG 123 (174)
Q Consensus 92 tGrVQGVGFR~fV~rlA~~LgL~G~VrN~~DG 123 (174)
.++=-|+ ||.|+.++|.+++=++|.+|..|-
T Consensus 56 iA~PYG~-~RD~~lr~~~~~~~~~~~~~l~D~ 86 (143)
T PF06610_consen 56 IAWPYGI-YRDWVLRQAARLSPSRWSKNLADL 86 (143)
T ss_pred hccchhH-HHHHHHHHhcccCchHHHHHHHHH
Confidence 3444444 999999999999999999999884
No 103
>PF13098 Thioredoxin_2: Thioredoxin-like domain; PDB: 1T3B_A 2L57_A 1EEJ_B 1TJD_A 1JZD_B 1JZO_A 1G0T_B 3GV1_A 1V58_A 2H0H_A ....
Probab=20.29 E-value=2.6e+02 Score=19.45 Aligned_cols=41 Identities=24% Similarity=0.255 Sum_probs=24.8
Q ss_pred hHHHHHHHHhcCCeEE---EEeCCCCcEEEEEEcCHHhHHHHHHH
Q 030606 101 RNWTIENATQLGLKGW---VRNRRDGSVEALFSGNPDSVKEMEQR 142 (174)
Q Consensus 101 R~fV~rlA~~LgL~G~---VrN~~DGsVEI~aeG~ee~Ie~Fi~~ 142 (174)
+..-..+|.++|+.|+ +--..||.+.-.+.|-... ++|.++
T Consensus 68 ~~~~~~l~~~~~v~gtPt~~~~d~~G~~v~~~~G~~~~-~~l~~~ 111 (112)
T PF13098_consen 68 RLSNKELAQRYGVNGTPTIVFLDKDGKIVYRIPGYLSP-EELLKM 111 (112)
T ss_dssp HHHHHHHHHHTT--SSSEEEECTTTSCEEEEEESS--H-HHHHHH
T ss_pred hHHHHHHHHHcCCCccCEEEEEcCCCCEEEEecCCCCH-HHHHhh
Confidence 3344579999999997 4555689876677886433 445544
No 104
>PF04428 Choline_kin_N: Choline kinase N terminus; InterPro: IPR007521 This domain is found N-terminal to choline/ethanolamine kinase regions (IPR002573 from INTERPRO) in some plant and fungal choline kinase enzymes (2.7.1.32 from EC). This region is only found in some members of the choline kinase family, and is therefore unlikely to contribute to catalysis.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor
Probab=20.12 E-value=71 Score=21.80 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=19.4
Q ss_pred chhHHHHHHHHhcCCeEEEEeC
Q 030606 99 FYRNWTIENATQLGLKGWVRNR 120 (174)
Q Consensus 99 GFR~fV~rlA~~LgL~G~VrN~ 120 (174)
-|+.=+.++++.|.|+||-+-.
T Consensus 27 ~fk~di~~l~htL~i~~W~~v~ 48 (53)
T PF04428_consen 27 RFKQDILRLIHTLKIKKWRRVP 48 (53)
T ss_pred ccHHHHHHHHHHhcccccccCc
Confidence 6999999999999999996543
No 105
>PRK15219 carbonic anhydrase; Provisional
Probab=20.01 E-value=1.2e+02 Score=26.41 Aligned_cols=19 Identities=26% Similarity=0.401 Sum_probs=16.9
Q ss_pred hcCCeEEEEeCCCCcEEEE
Q 030606 110 QLGLKGWVRNRRDGSVEAL 128 (174)
Q Consensus 110 ~LgL~G~VrN~~DGsVEI~ 128 (174)
++.|.||+.+..+|.|+.+
T Consensus 226 ~l~I~G~~Ydl~tG~V~~l 244 (245)
T PRK15219 226 KIKIVGSMYNLNGGKVEFF 244 (245)
T ss_pred CcEEEEEEEECCCeEEEee
Confidence 5779999999999999875
Done!