BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030622
(174 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3BRX|A Chain A, Crystal Structure Of Calcium-Bound Cotton Annexin Gh1
Length = 317
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 10/137 (7%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L KAFSG G +E +I ILG+ E R RK E + + +K L
Sbjct: 17 DCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYA---------ETYGEDLLKALD 67
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V+LWA+ P ERDA L EA K+ +SN V++EIA TRS+++LL AR+AYH
Sbjct: 68 KELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYH 127
Query: 122 SLFEHSIEEDVASHIHG 138
+ ++ S+EEDVA H G
Sbjct: 128 ARYKKSLEEDVAHHTTG 144
>pdb|1N00|A Chain A, Annexin Gh1 From Cotton
Length = 321
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 81/137 (59%), Gaps = 10/137 (7%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L KAFSG G +E +I ILG+ E R RK E + + +K L
Sbjct: 21 DCEQLRKAFSGWGTNEGLIIDILGHRNAEQRNLIRKTYA---------ETYGEDLLKALD 71
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V+LWA+ P ERDA L EA K+ +SN V++EIA TRS+++LL AR+AYH
Sbjct: 72 KELSNDFERLVLLWALDPAERDALLANEATKRWTSSNQVLMEIACTRSANQLLHARQAYH 131
Query: 122 SLFEHSIEEDVASHIHG 138
+ ++ S+EEDVA H G
Sbjct: 132 ARYKKSLEEDVAHHTTG 148
>pdb|1YCN|A Chain A, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|1YCN|B Chain B, X-Ray Structure Of Annexin From Arabidopsis Thaliana Gene
At1g35720
pdb|2Q4C|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
pdb|2Q4C|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of
Annexin From Arabidopsis Thaliana Gene At1g35720
Length = 317
Score = 97.8 bits (242), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L AF G G +E +ISIL + E R+ R+ E + + +K L
Sbjct: 16 DAEQLRTAFEGWGTNEDLIISILAHRSAEQRKVIRQA---------YHETYGEDLLKTLD 66
Query: 63 HEFMR-FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ A++LW + P ERDA L EA K+ +SN V++E+A TR+S +LL AR+AYH
Sbjct: 67 KELSNDFERAILLWTLEPGERDALLANEATKRWTSSNQVLMEVACTRTSTQLLHARQAYH 126
Query: 122 SLFEHSIEEDVASHIHGKEKKVHYIASLIAS 152
+ ++ S+EEDVA H G +K+ + SL+ S
Sbjct: 127 ARYKKSLEEDVAHHTTGDFRKL--LVSLVTS 155
>pdb|1DK5|A Chain A, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
pdb|1DK5|B Chain B, Crystal Structure Of Annexin 24(Ca32) From Capsicum Annuum
Length = 322
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 85/151 (56%), Gaps = 12/151 (7%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ E L AF G G +EK +ISIL + R+ R+ E + + +K L
Sbjct: 24 DCEQLRSAFKGWGTNEKLIISILAHRTAAQRKLIRQTYA---------ETFGEDLLKELD 74
Query: 63 HEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
E F+ V++W + P ERDA L KEA K+ SN V+VE+A TRS EL+ AR+AYH
Sbjct: 75 RELTHDFEKLVLVWTLDPSERDAHLAKEATKRWTKSNFVLVELACTRSPKELVLAREAYH 134
Query: 122 SLFEHSIEEDVASHIHGKEKKVHYIASLIAS 152
+ ++ S+EEDVA H G +K+ + L++S
Sbjct: 135 ARYKKSLEEDVAYHTTGDHRKL--LVPLVSS 163
>pdb|1AII|A Chain A, Annexin Iii
Length = 323
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ EA+ KA G G DEK +ISIL RQ KE + + K LK
Sbjct: 23 DAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKE-------------YQAAYGKELK 69
Query: 63 HEFM-----RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGAR 117
+ F++ +V P DA+ +K+++K + ++EI +TR+S ++
Sbjct: 70 DDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDIS 129
Query: 118 KAYHSLFEHSIEEDVASHIHGKEKK 142
+AY+++++ S+ +D++S G +K
Sbjct: 130 QAYYTVYKKSLGDDISSETSGDFRK 154
>pdb|1AXN|A Chain A, The High Resolution Structure Of Annexin Iii Shows
Differences With Annexin V
Length = 323
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 18/145 (12%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLK 62
+ EA+ KA G G DEK +ISIL RQ KE + + K LK
Sbjct: 23 DAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKE-------------YQAAYGKELK 69
Query: 63 HEFM-----RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGAR 117
+ F++ +V P DA+ +K+++K + ++EI +TR+S ++
Sbjct: 70 DDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTRTSRQMKDIS 129
Query: 118 KAYHSLFEHSIEEDVASHIHGKEKK 142
+AY+++++ S+ +D++S G +K
Sbjct: 130 QAYYTVYKKSLGDDISSETSGDFRK 154
>pdb|1W45|A Chain A, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus.
pdb|1W45|B Chain B, The 2.5 Angstroem Structure Of The K16a Mutant Of Annexin
A8, Which Has An Intact N-Terminus
Length = 327
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
E L KA G G +E+ +I +L RQ K F A+ + + LK E
Sbjct: 28 ETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAK--SFKAQ-------FGKDLTETLKSE 78
Query: 65 FM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
+F+ +V P+ +A+ + +A+K VI+EI ++R+ ++L KAY
Sbjct: 79 LSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEED 138
Query: 124 FEHSIEEDVASHIHG 138
+ S+EED+ + G
Sbjct: 139 YGSSLEEDIQADTSG 153
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 102 VEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG 138
+ I TRS+ LL + Y + SIE+ + S HG
Sbjct: 202 ITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHG 238
>pdb|1W3W|A Chain A, The 2.1 Angstroem Resolution Structure Of Annexin A8
Length = 327
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHE 64
E L KA G G +E+ +I +L RQ K F A+ + + LK E
Sbjct: 28 ETLYKAMKGIGTNEQAIIDVLTKRSNTQRQQIAK--SFKAQ-------FGKDLTETLKSE 78
Query: 65 FM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSL 123
+F+ +V P+ +A+ + +A+K VI+EI ++R+ ++L KAY
Sbjct: 79 LSGKFERLIVALMYPPYRYEAKELHDAMKGLGTKEGVIIEILASRTKNQLREIMKAYEED 138
Query: 124 FEHSIEEDVASHIHG 138
+ S+EED+ + G
Sbjct: 139 YGSSLEEDIQADTSG 153
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 102 VEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG 138
+ I TRS+ LL + Y + SIE+ + S HG
Sbjct: 202 ITILCTRSATHLLRVFEEYEKIANKSIEDSIKSETHG 238
>pdb|1SAV|A Chain A, Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +F+ +V DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALMKXSRLYDAYELKHALKGAGTNEKVLTEIIASRTXEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSG 147
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 20 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEK 79
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 80 L-IVALMKXSRL 90
>pdb|1AVC|A Chain A, Bovine Annexin Vi (Calcium-Bound)
Length = 673
Score = 49.7 bits (117), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ +AL KA G G DE T+I I+ + RQ R+ + F R D L
Sbjct: 367 ADAKALRKAMKGLGTDEDTIIDIITHRSNAQRQQIRQTF------KSHFGR--DLMADLK 418
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
++ M P DA+ +K+A++ ++EI +TR++ E+ KAY
Sbjct: 419 SELSGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIQAINKAYK 478
Query: 122 SLFEHSIEEDVASHIHGKEKKV 143
+ ++E+ ++S G K++
Sbjct: 479 EDYHKTLEDALSSDTSGHFKRI 500
Score = 40.8 bits (94), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAF-RKEGGFFAEDERRFERWNDHHVKLL 61
+ E L A G G D++ +I+++ + + RQ + + +D + L
Sbjct: 25 DAETLYNAMKGFGSDKEAIINLITSRSNKQRQEICQNYKSLYGKD----------LIADL 74
Query: 62 KHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K+E +F+ +V P DA+ IK+A+ ++EI ++R+++++ AY
Sbjct: 75 KYELTGKFERLIVGLMRPPAYADAKEIKDAISGIGTDEKCLIEILASRTNEQIHQLVAAY 134
Query: 121 HSLFEHSIEEDVASHIHGKEKKV 143
+E +E D+ G +K+
Sbjct: 135 KDAYERDLEADITGDTSGHFRKM 157
Score = 32.0 bits (71), Expect = 0.20, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 15 GVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE I ILGN +H + + K G E R E L +F +
Sbjct: 193 GTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGE---------LSGDFEKLML 243
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV E A + +A+K ++ ++ I +RS ++L R+ + + +E S+
Sbjct: 244 AVVKCIRSTAEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYS 303
Query: 131 DVASHIHGKEKK 142
+ + G+ KK
Sbjct: 304 MIKNDTSGEYKK 315
Score = 27.7 bits (60), Expect = 3.1, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG 138
+ DA+ +++A+K I++I + RS+ + R+ + S F + D+ S + G
Sbjct: 366 DADAKALRKAMKGLGTDEDTIIDIITHRSNAQRQQIRQTFKSHFGRDLMADLKSELSG 423
>pdb|1HVE|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
pdb|1HVG|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSG 146
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 19 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFQK 78
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 79 L-IVALMKPSRL 89
>pdb|1HVF|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFQKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSG 146
Score = 29.6 bits (65), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 19 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFQK 78
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 79 L-IVALMKPSRL 89
>pdb|1HVD|A Chain A, Structural And Electrophysiological Analysis Of Annexin V
Mutants. Mutagenesis Of Human Annexin V, An In Vitro
Voltage-Gated Calcium Channel, Provides Information
About The Structural Features Of The Ion Pathway, The
Voltage Sensor And The Ion Selectivity Filter
Length = 319
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSG 146
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 19 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEK 78
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 79 L-IVALMKPSRL 89
>pdb|1ANW|A Chain A, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANW|B Chain B, The Effect Of Metal Binding On The Structure Of Annexin V
And Implications For Membrane Binding
pdb|1ANX|A Chain A, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|B Chain B, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
pdb|1ANX|C Chain C, The Crystal Structure Of A New High-Calcium Form Of
Annexin V
Length = 319
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 18 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 67
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 68 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 125 KQVYEEEYGSSLEDDVVGDTSG 146
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 19 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEK 78
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 79 L-IVALMKPSRL 89
>pdb|1AVH|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1AVH|B Chain B, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR|A Chain A, Crystal And Molecular Structure Of Human Annexin V After
Refinement. Implications For Structure, Membrane Binding
And Ion Channel Formation Of The Annexin Family Of
Proteins
Length = 320
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +++ M P DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSG 147
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA +++A+K I+ + ++RS+ + A+ +LF + +D+ S + GK +K
Sbjct: 20 DAETLRKAMKGLGTDEESILTLLTSRSNAQRQEISAAFKTLFGRDLLDDLKSELTGKFEK 79
Query: 143 VHYIASLIASRL 154
+ +A + SRL
Sbjct: 80 L-IVALMKPSRL 90
>pdb|2H0L|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFER-WNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E FE + V
Sbjct: 16 ADAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEE----------FETLFGRDLVND 65
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 66 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 125
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 126 YEEEYGSNLEDDVVGDTSG 144
>pdb|1BC1|A Chain A, Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k,
S228k, S303k)
Length = 319
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTKG 145
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELKGKFEKL-IVALMKPSRL 88
>pdb|2H0K|A Chain A, Crystal Structure Of A Mutant Of Rat Annexin A5
pdb|2H0K|B Chain B, Crystal Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFER-WNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E FE + V
Sbjct: 16 ADAEVLEKAMEGLGTDEDSILNLLTARSNAQRQQIAEE----------FETLFGRDLVND 65
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 66 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 125
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 126 YEEEYGSNLEDDVVGDTSG 144
>pdb|1BC3|A Chain A, Recombinant Rat Annexin V, Triple Mutant (T72k, S144k,
S228k)
Length = 319
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTKG 145
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELKGKFEKL-IVALMKPSRL 88
>pdb|2RAN|A Chain A, Rat Annexin V Crystal Structure: Ca2+-Induced
Conformational Changes
Length = 316
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 16 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 70
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
+F+ +V DA +K ALK V+ EI ++R+ +EL ++AY
Sbjct: 71 TG----KFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQAY 126
Query: 121 HSLFEHSIEEDVASHIHG 138
+ ++E+DV G
Sbjct: 127 EEEYGSNLEDDVVGDTSG 144
Score = 27.3 bits (59), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 68 FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHS 127
+ V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 2 LRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD 61
Query: 128 IEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 62 LVNDMKSELTGKFEKL-IVALMKPSRL 87
>pdb|2H0M|A Chain A, Structure Of A Mutant Of Rat Annexin A5
Length = 318
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELTGKFEKL-IVALMKPSRL 88
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|2IE6|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Xenon
pdb|2IE7|A Chain A, Annexin V Under 2.0 Mpa Pressure Of Nitrous Oxide
Length = 318
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 16 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 65
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 66 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 125
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 126 YEEEYGSNLEDDVVGDTSG 144
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 68 FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHS 127
+ V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 2 LRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD 61
Query: 128 IEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 62 LVNDMKSELTGKFEKL-IVALMKPSRL 87
>pdb|1A8A|A Chain A, Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B|A Chain A, Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 319
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 68 FKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHS 127
+ V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 3 LRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD 62
Query: 128 IEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 63 LVNDMKSELTGKFEKL-IVALMKPSRL 88
>pdb|1BCY|A Chain A, Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND +L
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVNDMKSEL 71
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
K +F + +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 72 -KGKFEK----LIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELKGKFEKL-IVALMKPSRL 88
>pdb|1N41|A Chain A, Crystal Structure Of Annexin V K27e Mutant
Length = 319
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMEGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
>pdb|1N42|A Chain A, Crystal Structure Of Annexin V R149e Mutant
Length = 319
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELTGKFEKL-IVALMKPSRL 88
>pdb|1BC0|A Chain A, Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D ND
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD-----LVND----- 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELTGKFEKL-IVALMKPSRL 88
>pdb|1N44|A Chain A, Crystal Structure Of Annexin V R23e Mutant
Length = 319
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLEKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLEKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELTGKFEKL-IVALMKPSRL 88
>pdb|2XO2|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Azidohomoalanine
pdb|2XO3|A Chain A, Human Annexin V With Incorporated Methionine Analogue
Homopropargylglycine
Length = 320
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ E L KA G G DE++++++L + RQ AF+ F D +D
Sbjct: 19 ADAETLRKAXKGLGTDEESILTLLTSRSNAQRQEISAAFKT---LFGRD-----LLDD-- 68
Query: 58 VKLLKHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E +F+ +V DA +K ALK + V+ EI ++R+ +EL
Sbjct: 69 ---LKSELTGKFEKLIVALXKPSRLYDAYELKHALKGAGTNEKVLTEIIASRTPEELRAI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y + S+E+DV G
Sbjct: 126 KQVYEEEYGSSLEDDVVGDTSG 147
>pdb|1BCW|A Chain A, Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELAGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELAGKFEKL-IVALMKPSRL 88
>pdb|1ALA|A Chain A, Structure Of Chicken Annexin V At 2.25-Angstroms
Resolution
Length = 321
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ EAL KA G G DE+T++ IL + RQ AF+ F D
Sbjct: 19 ADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKT---LFGRD----------L 65
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWER-DARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
V LK E +++ M P DA +K A+K + V+ EI ++R+ E+
Sbjct: 66 VDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNI 125
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y +E ++E+ + G
Sbjct: 126 KQVYMQEYEANLEDKITGETSG 147
Score = 29.6 bits (65), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 73 VLWAMHPWER--DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
+ A P++ DA +++A+K I++I ++R++ + A+ +LF + +
Sbjct: 8 TVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVD 67
Query: 131 DVASHIHGK 139
D+ S + GK
Sbjct: 68 DLKSELTGK 76
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 15 GVDEKTVISILGNSQPEH-RQAFRKE---GGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE+T I+ILG H R+ F K GF E+ E D LL
Sbjct: 188 GTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLL--------- 238
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV A + ++K + ++ + +RS +LL R + F S+ +
Sbjct: 239 AVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSLYQ 298
Query: 131 DVASHIHGKEKK 142
+ G +K
Sbjct: 299 MIQKDTSGDYRK 310
>pdb|1YII|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Ca2+
pdb|1YJ0|A Chain A, Crystal Structures Of Chicken Annexin V In Complex With
Zn2+
Length = 320
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 18/142 (12%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHH 57
A+ EAL KA G G DE+T++ IL + RQ AF+ F D
Sbjct: 18 ADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKT---LFGRD----------L 64
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWER-DARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
V LK E +++ M P DA +K A+K + V+ EI ++R+ E+
Sbjct: 65 VDDLKSELTGKFETLMVSLMRPARIFDAHALKHAIKGAGTNEKVLTEILASRTPAEVQNI 124
Query: 117 RKAYHSLFEHSIEEDVASHIHG 138
++ Y +E ++E+ + G
Sbjct: 125 KQVYMQEYEANLEDKITGETSG 146
Score = 29.6 bits (65), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 73 VLWAMHPWER--DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
+ A P++ DA +++A+K I++I ++R++ + A+ +LF + +
Sbjct: 7 TVTAFSPFDARADAEALRKAMKGMGTDEETILKILTSRNNAQRQEIASAFKTLFGRDLVD 66
Query: 131 DVASHIHGK 139
D+ S + GK
Sbjct: 67 DLKSELTGK 75
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 13/132 (9%)
Query: 15 GVDEKTVISILGNSQPEH-RQAFRKE---GGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE+T I+ILG H R+ F K GF E+ E D LL
Sbjct: 187 GTDEETFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLL--------- 237
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV A + ++K + ++ + +RS +LL R + F S+ +
Sbjct: 238 AVVKCIRSVPAYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFRKNFAKSLYQ 297
Query: 131 DVASHIHGKEKK 142
+ G +K
Sbjct: 298 MIQKDTSGDYRK 309
>pdb|1BCZ|A Chain A, Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 12/139 (8%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-GGFFAEDERRFERWNDHHVKL 60
A+ E L KA G G DE +++++L RQ +E F D V
Sbjct: 17 ADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRD----------LVND 66
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
+K E +++ M P DA +K ALK V+ EI ++R+ +EL ++A
Sbjct: 67 MKSELSGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASRTPEELRAIKQA 126
Query: 120 YHSLFEHSIEEDVASHIHG 138
Y + ++E+DV G
Sbjct: 127 YEEEYGSNLEDDVVGDTSG 145
Score = 28.9 bits (63), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 66 MRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFE 125
M + V ++ DA ++++A+K I+ + + RS+ + + + +LF
Sbjct: 1 MALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFG 60
Query: 126 HSIEEDVASHIHGKEKKVHYIASLIASRL 154
+ D+ S + GK +K+ +A + SRL
Sbjct: 61 RDLVNDMKSELSGKFEKL-IVALMKPSRL 88
>pdb|1M9I|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant
T356d Of Annexin Vi
Length = 672
Score = 47.8 bits (112), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
A+ +AL KA G G DE T+I I+ + RQ R+ + F R D L
Sbjct: 366 ADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTF------KSHFGR--DLMTDLK 417
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYH 121
++ M P DA+ +K+A++ ++EI +TR++ E+ +AY
Sbjct: 418 SEISGDLARLILGLMMPPAHYDAKQLKKAMEGAGTDEKALIEILATRTNAEIRAINEAYK 477
Query: 122 SLFEHSIEEDVASHIHGKEKKV 143
+ S+E+ ++S G +++
Sbjct: 478 EDYHKSLEDALSSDTSGHFRRI 499
Score = 40.0 bits (92), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAF-RKEGGFFAEDERRFERWNDHHVKLL 61
+ EAL A G G D++ ++ I+ + RQ + + +D + L
Sbjct: 24 DAEALYTAMKGFGSDKEAILDIITSRSNRQRQEVCQSYKSLYGKD----------LIADL 73
Query: 62 KHEFM-RFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K+E +F+ +V P DA+ IK+A+ ++EI ++R+++++ AY
Sbjct: 74 KYELTGKFERLIVGLMRPPAYCDAKEIKDAISGIGTDEKCLIEILASRTNEQMHQLVAAY 133
Query: 121 HSLFEHSIEEDVASHIHGKEKKV 143
+E +E D+ G +K+
Sbjct: 134 KDAYERDLEADIIGDTSGHFQKM 156
Score = 31.6 bits (70), Expect = 0.25, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 15 GVDEKTVISILGNSQPEHRQ----AFRKEGGFFAEDERRFERWNDHHVKLLKHEFMRFKN 70
G DE I ILGN +H + + K G E R E L +F +
Sbjct: 192 GTDEAQFIYILGNRSKQHLRLVFDEYLKTTGKPIEASIRGE---------LSGDFEKLML 242
Query: 71 AVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEE 130
AVV E A + +A+K ++ ++ I +RS ++L R+ + + +E S+
Sbjct: 243 AVVKCIRSTPEYFAERLFKAMKGLGTRDNTLIRIMVSRSELDMLDIREIFRTKYEKSLYS 302
Query: 131 DVASHIHGKEKK 142
+ + G+ KK
Sbjct: 303 MIKNDTSGEYKK 314
Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 81 ERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG 138
+ DA+ +++A+K I++I + RS+ + R+ + S F + D+ S I G
Sbjct: 365 DADAKALRKAMKGLGTDEDTIIDIITHRSNVQRQQIRQTFKSHFGRDLMTDLKSEISG 422
>pdb|1XJL|A Chain A, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
pdb|1XJL|B Chain B, Structure Of Human Annexin A2 In The Presence Of Calcium
Ions
Length = 319
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N E RQ FA +RR ++ LK
Sbjct: 22 IETAIKT---KGVDEVTIVNILTNRSNEQRQDIA-----FAY-QRRTKK---ELASALKS 69
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 70 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 129
Query: 123 LFEHSIEEDVASHIHGKEKKV 143
+++ +E+D+ S G +K+
Sbjct: 130 MYKTDLEKDIISDTSGDFRKL 150
>pdb|1W7B|A Chain A, Annexin A2: Does It Induce Membrane Aggregation By A New
Multimeric State Of The Protein
Length = 339
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N E RQ FA +RR ++ LK
Sbjct: 42 IETAIKT---KGVDEVTIVNILTNRSNEQRQDIA-----FAY-QRRTKK---ELASALKS 89
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 90 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 149
Query: 123 LFEHSIEEDVASHIHGKEKKV 143
+++ +E+D+ S G +K+
Sbjct: 150 MYKTDLEKDIISDTSGDFRKL 170
>pdb|2ZHI|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.58 A Resolution
pdb|2ZHJ|A Chain A, Crystal Structure Analysis Of The Sodium-Bound Annexin A4
At 1.34 A Resolution
Length = 322
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 20/139 (14%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I +L RQ R G ED
Sbjct: 22 DAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLED----------- 70
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + ++ A+K ++EI ++R+ +E+
Sbjct: 71 ---LKSELSSNFEQVILGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRNPEEIRRI 127
Query: 117 RKAYHSLFEHSIEEDVASH 135
+ Y + S+EED+ S
Sbjct: 128 NQTYQQQYGRSLEEDICSD 146
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA+++++A+K I+ + + R++ + R AY S + ED+ S + ++
Sbjct: 22 DAQVLRKAMKGLGTDEDAIIGVLACRNTAQRQEIRTAYKSTIGRDLLEDLKSELSSNFEQ 81
Query: 143 V 143
V
Sbjct: 82 V 82
>pdb|2ZOC|A Chain A, Crystal Structure Of Recombinant Human Annexin Iv
pdb|2ZOC|B Chain B, Crystal Structure Of Recombinant Human Annexin Iv
Length = 319
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 1 MAEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKL 60
M + + L KA G G DE +IS+L RQ R + + R +
Sbjct: 17 MEDAQTLRKAMKGLGTDEDAIISVLAYRNTAQRQEIRT--AYKSTIGRDL-------IDD 67
Query: 61 LKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKA 119
LK E V++ M P D + ++ A+K ++EI ++R+ +E+ +
Sbjct: 68 LKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQT 127
Query: 120 YHSLFEHSIEEDVAS 134
Y + S+E+D+ S
Sbjct: 128 YQQQYGRSLEDDIRS 142
Score = 26.9 bits (58), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA+ +++A+K I+ + + R++ + R AY S + +D+ S + G ++
Sbjct: 19 DAQTLRKAMKGLGTDEDAIISVLAYRNTAQRQEIRTAYKSTIGRDLIDDLKSELSGNFEQ 78
Query: 143 V 143
V
Sbjct: 79 V 79
>pdb|2HYU|A Chain A, Human Annexin A2 With Heparin Tetrasaccharide Bound
pdb|2HYV|A Chain A, Human Annexin A2 With Heparin Hexasaccharide Bound
pdb|2HYW|A Chain A, Human Annexin A2 With Calcium Bound
pdb|2HYW|B Chain B, Human Annexin A2 With Calcium Bound
Length = 308
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 4 IEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKH 63
IE IK GVDE T+++IL N RQ FA +RR ++ LK
Sbjct: 11 IETAIKT---KGVDEVTIVNILTNRSNAQRQDIA-----FAY-QRRTKK---ELASALKS 58
Query: 64 EFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHS 122
V+L + P + DA +K ++K ++EI +R++ EL + Y
Sbjct: 59 ALSGHLETVILGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKE 118
Query: 123 LFEHSIEEDVASHIHGKEKKV 143
+++ +E+D+ S G +K+
Sbjct: 119 MYKTDLEKDIISDTSGDFRKL 139
>pdb|1AOW|A Chain A, Annexin Iv
Length = 309
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I++L RQ R G +D
Sbjct: 9 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD----------- 57
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + +++A+K ++EI ++R+ +E+
Sbjct: 58 ---LKSELSGNFEQVILGMMTPTVLYDVQEVRKAMKGAGTDEGCLIEILASRTPEEIRRI 114
Query: 117 RKAYHSLFEHSIEEDVASH 135
+ Y + S+E+D+ S
Sbjct: 115 NQTYQLQYGRSLEDDIRSD 133
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA+ +++A+K I+ + + RS+ + R AY + + +D+ S + G ++
Sbjct: 9 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQ 68
Query: 143 V 143
V
Sbjct: 69 V 69
>pdb|1ANN|A Chain A, Annexin Iv
Length = 318
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I++L RQ R G +D
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD----------- 66
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + +++A+K ++EI ++R+ +E+
Sbjct: 67 ---LKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRI 123
Query: 117 RKAYHSLFEHSIEEDVASH 135
+ Y + S+E+D+ S
Sbjct: 124 NQTYQLQYGRSLEDDIRSD 142
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA+ +++A+K I+ + + RS+ + R AY + + +D+ S + G ++
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQ 77
Query: 143 V 143
V
Sbjct: 78 V 78
>pdb|1I4A|A Chain A, Crystal Structure Of Phosphorylation-Mimicking Mutant T6d
Of Annexin Iv
Length = 318
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKE-----GGFFAEDERRFERWNDHH 57
+ + L KA G G DE +I++L RQ R G +D
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDD----------- 66
Query: 58 VKLLKHEFMRFKNAVVLWAMHPWE-RDARLIKEALKKGPNSNSVIVEIASTRSSDELLGA 116
LK E V+L M P D + +++A+K ++EI ++R+ +E+
Sbjct: 67 ---LKSELSGNFEQVILGMMTPTVLYDVQELRKAMKGAGTDEGCLIEILASRTPEEIRRI 123
Query: 117 RKAYHSLFEHSIEEDVASH 135
+ Y + S+E+D+ S
Sbjct: 124 NQTYQLQYGRSLEDDIRSD 142
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 31/61 (50%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHGKEKK 142
DA+ +++A+K I+ + + RS+ + R AY + + +D+ S + G ++
Sbjct: 18 DAQTLRKAMKGLGTDEDAIINVLAYRSTAQRQEIRTAYKTTIGRDLMDDLKSELSGNFEQ 77
Query: 143 V 143
V
Sbjct: 78 V 78
>pdb|1AIN|A Chain A, Crystal Structure Of Human Annexin I At 2.5 Angstroms
Resolution
Length = 314
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 10/138 (7%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
+++ AL KA GVDE T+I IL RQ + + E + + L
Sbjct: 14 SDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIK--AAYLQETGKPLDET-------L 64
Query: 62 KHEFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K VVL + P + DA ++ A+K ++EI ++R++ E+ + Y
Sbjct: 65 KKALTGHLEEVVLALLKTPAQFDADELRAAMKGLGTDEDTLIEILASRTNKEIRDINRVY 124
Query: 121 HSLFEHSIEEDVASHIHG 138
+ + +D+ S G
Sbjct: 125 REELKRDLAKDITSDTSG 142
>pdb|1HM6|A Chain A, X-Ray Structure Of Full-Length Annexin 1
pdb|1HM6|B Chain B, X-Ray Structure Of Full-Length Annexin 1
pdb|1MCX|A Chain A, Structure Of Full-Length Annexin A1 In The Presence Of
Calcium
Length = 346
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLL 61
+++EAL KA + GVDE T+I IL RQ + + E + + L
Sbjct: 46 SDVEALHKAITVKGVDEATIIEILTKRTNAQRQQIK--AAYLQEKGKPLDEA-------L 96
Query: 62 KHEFMRFKNAVVLWAMH-PWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
K V L + P + DA ++ A+K + EI ++R++ E+ + Y
Sbjct: 97 KKALTGHLEEVALALLKTPAQFDADELRAAMKGLGTDEDTLNEILASRTNREIREINRVY 156
Query: 121 HSLFEHSIEEDVASHIHGKEKK 142
+ + +D+ S G +K
Sbjct: 157 KEELKRDLAKDITSDTSGDYQK 178
>pdb|1DM5|A Chain A, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|B Chain B, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|C Chain C, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|D Chain D, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|E Chain E, Annexin Xii E105k Homohexamer Crystal Structure
pdb|1DM5|F Chain F, Annexin Xii E105k Homohexamer Crystal Structure
Length = 315
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 16/140 (11%)
Query: 3 EIEALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG----GFFAEDERRFERWNDHHV 58
+ E L KA G G DEK++ IL RQ + + G EDE + E +
Sbjct: 17 DAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGN--- 73
Query: 59 KLLKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARK 118
++ A + P E A + A+K + +++I T+S+ ++ +
Sbjct: 74 ---------YEAAALALLRKPDEFLAEQLHAAMKGLGTDKNALIDILCTQSNAQIHAIKA 124
Query: 119 AYHSLFEHSIEEDVASHIHG 138
A+ L++ +E+++ S G
Sbjct: 125 AFKLLYKEDLEKEIISETSG 144
>pdb|1AEI|A Chain A, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|B Chain B, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|C Chain C, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|D Chain D, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|E Chain E, Crystal Structure Of The Annexin Xii Hexamer
pdb|1AEI|F Chain F, Crystal Structure Of The Annexin Xii Hexamer
Length = 315
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 16/138 (11%)
Query: 5 EALIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEG----GFFAEDERRFERWNDHHVKL 60
E L KA G G DEK++ IL RQ + + G EDE + E +
Sbjct: 19 ETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSGN----- 73
Query: 61 LKHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAY 120
++ A + P E A + A+K + +++I T+S+ ++ + A+
Sbjct: 74 -------YEAAALALLRKPDEFLAEQLHAAMKGLGTDENALIDILCTQSNAQIHAIKAAF 126
Query: 121 HSLFEHSIEEDVASHIHG 138
L++ +E+++ S G
Sbjct: 127 KLLYKEDLEKEIISETSG 144
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 83 DARLIKEALKKGPNSNSVIVEIASTRSSDELLGARKAYHSLFEHSIEEDVASHIHG 138
DA +++A+K I I +TRS+ + + Y +LF +E+++ S + G
Sbjct: 17 DAETLRKAMKGIGTDEKSITHILATRSNAQRQQIKTDYTTLFGKHLEDELKSELSG 72
>pdb|1W61|A Chain A, Proline Racemase In Complex With 2 Molecules Of
Pyrrole-2- Carboxylic Acid (Holo Form)
pdb|1W61|B Chain B, Proline Racemase In Complex With 2 Molecules Of
Pyrrole-2- Carboxylic Acid (Holo Form)
pdb|1W62|A Chain A, Proline Racemase In Complex With One Molecule Of
Pyrrole-2- Carboxylic Acid (hemi Form)
pdb|1W62|B Chain B, Proline Racemase In Complex With One Molecule Of
Pyrrole-2- Carboxylic Acid (hemi Form)
Length = 414
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 62 KHEFMRFKNAVVLWAMHPWERDARLIKEALKKGPNSN 98
K E MRFK + MH AR++ L P SN
Sbjct: 36 KREIMRFKKSFTCIDMHTEGEAARIVTSGLPHIPGSN 72
>pdb|1BO9|A Chain A, Nmr Solution Structure Of Domain 1 Of Human Annexin I
Length = 73
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 2 AEIEALIKAFSGHGVDEKTVISILGNSQPEHRQ----AFRKEGG 41
+++ AL KA GVDE T+I IL RQ A+ +E G
Sbjct: 6 SDVAALHKAIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETG 49
>pdb|2WVV|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
pdb|2WVV|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
pdb|2WVV|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
Length = 450
Score = 28.1 bits (61), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 130 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 184
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 185 RYPTVKDFWFDGTWD 199
>pdb|2WVV|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron
Length = 450
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 130 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 184
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 185 RYPTVKDFWFDGTWD 199
>pdb|2XIB|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XIB|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With
Deoxyfuconojirimycin
pdb|2XII|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With An Extended
9- Fluorenone Iminosugar Inhibitor
pdb|2XII|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With An Extended
9- Fluorenone Iminosugar Inhibitor
Length = 453
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 133 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 187
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 188 RYPTVKDFWFDGTWD 202
>pdb|2WVT|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With A Novel
Iminosugar Fucosidase Inhibitor
pdb|2WVT|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 From
Bacteroides Thetaiotaomicron In Complex With A Novel
Iminosugar Fucosidase Inhibitor
pdb|2WVU|A Chain A, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|B Chain B, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|C Chain C, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
pdb|2WVU|D Chain D, Crystal Structure Of A Michaelis Complex Of Alpha-L-
Fucosidase Gh29 From Bacteroides Thetaiotaomicron With
The Synthetic Substrate 4-Nitrophenyl-Alpha-L-Fucose
Length = 443
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 134 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 188
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 189 RYPTVKDFWFDGTWD 203
>pdb|2WVS|A Chain A, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|B Chain B, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|C Chain C, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
pdb|2WVS|D Chain D, Crystal Structure Of An Alpha-L-Fucosidase Gh29 Trapped
Covalent Intermediate From Bacteroides Thetaiotaomicron
In Complex With 2-Fluoro-Fucosyl Fluoride Using An E288q
Mutant
Length = 443
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
Query: 7 LIKAFSGHGVDEKTVISILGNSQPEHRQAFRKEGGFFAEDERRFERWNDHHVKLLKHEFM 66
L+KA++ G+D S++ S P++R + + ED F R+ + LK
Sbjct: 134 LVKAYNDEGIDVHFYFSVMDWSNPDYRYDIKSK-----EDSIAFSRFLEFTDNQLKELAT 188
Query: 67 RFKNAVVLWAMHPWE 81
R+ W W+
Sbjct: 189 RYPTVKDFWFDGTWD 203
>pdb|1E8X|A Chain A, Structural Insights Into Phoshoinositide 3-Kinase
Enzymatic Mechanism And Signalling
pdb|1E90|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E7V|A Chain A, Structure Determinants Of Phosphoinositide 3-kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8W|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 26.2 bits (56), Expect = 9.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 74 LWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRS 109
L+AMHPW L + LKK N+ IV ST S
Sbjct: 54 LYAMHPWVTSKPLPEYLLKKITNNCVFIVIHRSTTS 89
>pdb|1E7U|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 961
Score = 26.2 bits (56), Expect = 9.5, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 19/36 (52%)
Query: 74 LWAMHPWERDARLIKEALKKGPNSNSVIVEIASTRS 109
L+AMHPW L + LKK N+ IV ST S
Sbjct: 54 LYAMHPWVTSKPLPEYLLKKITNNCVFIVIHRSTTS 89
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.133 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,765,547
Number of Sequences: 62578
Number of extensions: 179538
Number of successful extensions: 560
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 400
Number of HSP's gapped (non-prelim): 132
length of query: 174
length of database: 14,973,337
effective HSP length: 92
effective length of query: 82
effective length of database: 9,216,161
effective search space: 755725202
effective search space used: 755725202
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)