BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030624
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/163 (60%), Positives = 119/163 (73%), Gaps = 1/163 (0%)
Query: 9 DDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKD 68
D++ + P E +VLVGRTGNGKSATGNSI+ + FKS+ SSGVT C + V +
Sbjct: 32 DEFSASQPHPVE-NIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPE 90
Query: 69 GQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHS 128
G ++NVIDTPGLFD S +EF+GKEIVKC+ +A G+HAVL+V SVR+R SQEEE L +
Sbjct: 91 GPILNVIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLST 150
Query: 129 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLK 171
LQ LFG KI DY+IVVFTGGD LED+ TLEDYLG P LK
Sbjct: 151 LQVLFGSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLK 193
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 180 bits (457), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 116/157 (73%), Gaps = 4/157 (2%)
Query: 21 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 80
+ +VLVGRTGNGKS+TGN++LG + FKS+ + GVT CEM R ++DG ++NVIDTPGL
Sbjct: 6 KNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVIDTPGL 65
Query: 81 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 140
D + + EI+ C+ MA++GIHAVL+V S R R S+EEE+ +++LQ +FG +I DY
Sbjct: 66 CDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQILDY 125
Query: 141 MIVVFTGGDELEDNDETLEDYLGRECP----KPLKVC 173
IVVFTGGD+LE++D+TL+DY CP K L++C
Sbjct: 126 CIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLC 162
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 124 bits (311), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/156 (41%), Positives = 100/156 (64%), Gaps = 5/156 (3%)
Query: 16 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 75
P N + +VLVG+TG GKSATGNSILGR+ F S ++ +T CE + + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 76 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 135
DTPG+FD + KEI++CI + G HA+L+V + R+++EE A + +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 136 KIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPLK 171
+ +MI++FT D+L D + L DYL RE P+ ++
Sbjct: 144 RARSFMILIFTRKDDLGDTN--LHDYL-REAPEDIQ 176
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
+VL+G+TG GKS+TGNSILGR+AF S + +T CE ++ DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIW-DGKELVVVDTPGIFD 91
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
KEI +C+ + G HA+L+V + ++ EE A L ++F KK +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPLGC-YTVEEHKATRKLLSMFEKKARRFMI 150
Query: 143 VVFTGGDELEDNDETLEDYL 162
++ T D+LED D + +YL
Sbjct: 151 LLLTRKDDLEDTD--IHEYL 168
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 94/150 (62%), Gaps = 6/150 (4%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG+TG+GKSATGNSILGR+AF+S+ S+ VT+T + + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFS 164
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
E K+I C +A G HAVL+V V R++ E++A LQ +FG I Y I
Sbjct: 165 PQNQPEATAKKI--CDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTI 221
Query: 143 VVFTGGDELEDNDETLEDYLGRECPKPLKV 172
+VFT ++L + +LE+Y+ K L V
Sbjct: 222 LVFTRKEDLAEG--SLEEYIQENNNKSLDV 249
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 5/146 (3%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
+VL+G+TG GKS+TGNSILG + F S + +T CE +R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
+EI + + + G HA+L+V + R++ EE A + +FGK+ +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 143 VVFTGGDELEDNDETLEDYLGRECPK 168
++ T D+LED D + +YL + PK
Sbjct: 151 LLLTRKDDLEDTD--IHEYLEK-APK 173
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
+VLVG+TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFD 69
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
+ KEI +CI + G HA+++V + R+++EE+ + ++ +FGK +M+
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVL-LLGRYTEEEQKTVALIKAVFGKSAMKHMV 128
Query: 143 VVFTGGDELE 152
++FT +ELE
Sbjct: 129 ILFTRKEELE 138
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 86/140 (61%), Gaps = 6/140 (4%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG+TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
E K+I C +A G HAVL+V V R++ E++ A LQ +FG I Y I
Sbjct: 164 PQNQPEATAKKI--CDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTI 220
Query: 143 VVFTGGDELEDNDETLEDYL 162
+VFT +EL + +LE+Y+
Sbjct: 221 LVFTRKEELAEG--SLEEYI 238
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 91/154 (59%), Gaps = 9/154 (5%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 81
++L+GR+G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP F
Sbjct: 477 NIILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPS-F 534
Query: 82 DFSAGSE----FVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKI 137
+ G+E + +EI C+ + ++G+ ++V + RF+QE+E + L+ F + I
Sbjct: 535 IQTPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQL-GRFTQEDEVVVEQLEASFEENI 593
Query: 138 FDYMIVVFTGGDELEDNDETLEDYLGRECPKPLK 171
YMIV+FT ++L D D L DY K LK
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LHDYTNNTKNKALK 625
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 85/140 (60%), Gaps = 4/140 (2%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++L+G+ G GKSATGN+ILG+ F+S+ S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
+ SE + + +C+ + D H VL++ + +++E+ + + G K + +MI
Sbjct: 110 SLSCSEVRQQNLKQCLELLADD-HCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMI 168
Query: 143 VVFTGGDELEDNDETLEDYL 162
VVFT DEL ++++L +Y+
Sbjct: 169 VVFTREDEL--DEDSLWNYI 186
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 16 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVI 75
P E V+L+G+ G GKSA GNSILG++ FK++ S + + + G+ V +I
Sbjct: 280 PDMPELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQGKKVLII 339
Query: 76 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 135
D+P + + V G HA L+V + S +++ ++ +FG+
Sbjct: 340 DSPEISSWKLDESAVKNHTFP-------GPHAFLLVTPLGSSLKSDDD-VFSIIKRIFGE 391
Query: 136 KIFDYMIVVFTGGDELEDN 154
K + IV+FT ++ ED
Sbjct: 392 KFTKFTIVLFTRKEDFEDQ 410
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 93.2 bits (230), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 10/157 (6%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++L+GR+G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L
Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQ 535
Query: 83 FSAGSE----FVGKEIVKC-IGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKI 137
S G+E + KEI +C + ++G+ ++VF + RF+QE+EA + L+ F + I
Sbjct: 536 MS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENI 593
Query: 138 FDYMIVVFTGGDELEDNDETLEDYLGRECPKPLKVCF 174
YMIV+FT ++L D D L D+ K LK F
Sbjct: 594 MKYMIVLFTRKEDLGDGD--LYDFTNNTKNKVLKRIF 628
Score = 86.3 bits (212), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 7/149 (4%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++L+G+ G GKSATGN+ILG+ F+SR S VT C+ + ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
E + + +C+ + D VL++ + ++E++ + +Q +FG + + +MI
Sbjct: 110 SLGCPEVQQQNLRQCLDLLADPY--VLLLVTPIGHSTEEDKKTIEGIQGVFGPQAYRHMI 167
Query: 143 VVFTGGDELEDNDETLEDYLGRECPKPLK 171
VVFT DEL ++TL++++ E K LK
Sbjct: 168 VVFTREDEL--GEDTLQNHI--ESKKYLK 192
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 11 WELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQ 70
W+ +P E V+L+G+ G GKSA GNSILG++ FK++ S + + L + +
Sbjct: 277 WDRDTP---ELRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQK 333
Query: 71 VVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQ 130
+ID+P + + V + G HA L+V + S + ++ ++
Sbjct: 334 KFLIIDSPEISSWKLDESDVKEHTF-------PGPHAFLLVTPLGSSL-KSGDSVFSIIK 385
Query: 131 TLFGKKIFDYMIVVFTGGDELEDND 155
+FG+K + I++FT ++ E D
Sbjct: 386 RIFGEKFIKFTIILFTRKEDFEGQD 410
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 102/171 (59%), Gaps = 16/171 (9%)
Query: 8 DDDWELTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK 67
+D+ T P+ ++LVG+TG GKSATGNSILG+ F+S+ + VT TC++ +T
Sbjct: 18 EDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-KTGTW 73
Query: 68 DGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALH 127
+G+ V V+DTP +F+ A ++ + K I C ++ G H +L+V + RF+ ++ A+
Sbjct: 74 NGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQDTVAIR 132
Query: 128 SLQTLFGKKIFDYMIVVFT-----GGDELED-----NDETLEDYLGRECPK 168
++ +FG +++++FT GG L+D ++ +L+D L REC +
Sbjct: 133 KVKEVFGTGAMRHVVILFTHKEDLGGQALDDYVANTDNCSLKD-LVRECER 182
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 88/146 (60%), Gaps = 4/146 (2%)
Query: 17 SNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVID 76
S E ++LVG+TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +ID
Sbjct: 19 SRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IID 77
Query: 77 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 136
TP +F + E + KE+ +C ++ G H +L+V + R++ +++ A ++ +FG+
Sbjct: 78 TPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVKEIFGED 136
Query: 137 IFDYMIVVFTGGDELEDNDETLEDYL 162
+ IV+FT ++L N +L DY+
Sbjct: 137 AMGHTIVLFTHKEDL--NGGSLMDYM 160
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 93/159 (58%), Gaps = 14/159 (8%)
Query: 20 ERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG 79
E ++L+G+ +GKSATGN+ILG+ FKS+ S V C+ + VL++ +VV VIDTP
Sbjct: 10 ELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPD 68
Query: 80 LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 139
LF A +E + I C+ ++ +HA+L+V ++ F++E+E +Q +FG +
Sbjct: 69 LFSSIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARR 127
Query: 140 YMIVVFTGGDE---------LEDN---DETLEDYLGREC 166
++I+VFT D+ +E N + ++DY GR C
Sbjct: 128 HIIIVFTRKDDLGDDLLQDFIEKNKPLKQLVQDYEGRYC 166
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPG-- 79
+VLVGR+G GKSATGNSILG F SR + VT T + R DGQ V V+DTP
Sbjct: 440 NIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPSFN 498
Query: 80 -LFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 138
+ D + +E+ +C+ + G ++VF + RF++E++ A+ L+ +FG
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 139 DYMIVVFTGGDELEDNDETLEDYLGRECPKPLKVCF 174
Y I++FT ++L + LED++ K L+ F
Sbjct: 558 KYAIMLFTRKEDLGAGN--LEDFMKNSDNKALRRIF 591
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 15 SPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV 74
+P E TV+LVG+ G GKSA GNSILGR+AF++ S VT + + + + V++
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRKKK-VSI 300
Query: 75 IDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFG 134
ID P + V K I C G HA L+V + +++ +EA L ++Q FG
Sbjct: 301 IDAPDISSLKNIDSEVRKHI--CTGP-----HAFLLVTPL-GFYTKNDEAVLSTIQNNFG 352
Query: 135 KKIFDYMIVVFTGGDELEDND 155
+K F+YMI++ T ++L D D
Sbjct: 353 EKFFEYMIILLTRKEDLGDQD 373
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVGRTG GKSATGNSILG++ F SR + VT +C + + + G V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLA-SRMWAGWQVEVVDTPDIFS 64
Query: 83 FSAGSEFVG-KEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYM 141
G E +C ++ G HA+L+V + RF+ ++ AL +++ LFGK++
Sbjct: 65 SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQVMART 123
Query: 142 IVVFTGGDELEDNDETLEDYL 162
+VVFT ++L + +L+DY+
Sbjct: 124 VVVFTRQEDLAGD--SLQDYV 142
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 5/140 (3%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++L+G+TG+GKSATGNSILGR F+S+ S+ VT T + +R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
E V I + I ++ G HAVL+V + RF+ E++ + LQ +FG + + I
Sbjct: 102 PQVSPE-VADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTI 159
Query: 143 VVFTGGDELEDNDETLEDYL 162
+VFT ++L +LEDY+
Sbjct: 160 LVFTRKEDLAGG--SLEDYV 177
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 90.1 bits (222), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG++G GKSATGNSIL R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 87
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 143 VVFTGGDELEDNDETLEDYL 162
V+FT ++LE +++LE+++
Sbjct: 147 VLFTRKEDLE--EKSLEEFV 164
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 21 RTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 80
R ++LVGRTG GKSATGNSILG+R F SR ++ VT C + D V V+DTP +
Sbjct: 28 RRLILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTG-SRRWDKCHVEVVDTPDI 86
Query: 81 FDFSAGSEFVG-KEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFD 139
F G +E C ++ G HA+L+V + RF+ +++ A+ ++ +FG+ +
Sbjct: 87 FSSQVSKTDPGCEERGHCYLLSAPGPHALLLVTQL-GRFTAQDQQAVRQVRDMFGEDVLK 145
Query: 140 YMIVVFTGGDELEDNDETLEDYL 162
+M++VFT ++L +L DY+
Sbjct: 146 WMVIVFTRKEDLAGG--SLHDYV 166
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 86/140 (61%), Gaps = 4/140 (2%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG++G GKSATGNSIL R AF+SR VT T + + +G+ V+DTP +F+
Sbjct: 47 ILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDTPPIFE 105
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
++ + K+I C M G H +L+V + R++ E+ A+ ++ +FG + YMI
Sbjct: 106 SKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGVMRYMI 164
Query: 143 VVFTGGDELEDNDETLEDYL 162
V+FT ++L DE+LE+++
Sbjct: 165 VLFTHKEDLA--DESLEEFV 182
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG++G GKSATGNS+L R AF+SR VT T + + T +G+ + V+DTP +F+
Sbjct: 25 ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 83
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDYMI 142
A ++ + K+I C + G H +L+V + RF+ E+ A+ ++ +FG + +MI
Sbjct: 84 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVFGVGVMRHMI 142
Query: 143 VVFTGGDELEDNDETLEDYL 162
V+FT ++L +++LE+++
Sbjct: 143 VLFTRKEDL--AEKSLEEFV 160
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 12/144 (8%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++LVG++G+GKSATGNSILGRR F+S+ S+ VT + Q +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQ-QGCRAWEGRELQVIDTPDILS 154
Query: 83 FSAGSEFVGKEIVKCIGMAKDG----IHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 138
A G + +G A G +AVL+V + RF++E++ L+ +FGK I
Sbjct: 155 PWA----AGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGIL 209
Query: 139 DYMIVVFTGGDELEDNDETLEDYL 162
I+VFT ++L + +LE YL
Sbjct: 210 ARTILVFTRKEDL--DGRSLETYL 231
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 71
+ + GRT +GKS+ GN +LG F S + VT C + R+ G +
Sbjct: 10 NLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMRRGGQEISLQ 69
Query: 72 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIH-AVLVVFSVRSRFSQEEEAALHS 128
+ V+DTPG + V +E+ K + ++G+H A+LV + F QE A+
Sbjct: 70 IQVLDTPGYPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFFGQEASNAVQL 129
Query: 129 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 162
+Q L G +YM V+FT +ELE+ + E+YL
Sbjct: 130 MQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL 163
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 13 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE----------MQ 62
+T P+ + L G T +GKS+ GN +LG F S + VT+ C M+
Sbjct: 1 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 60
Query: 63 RTVLKDGQVVNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS- 119
R L+ V V+DTPG ++V +E+ + + + G+H L+V F
Sbjct: 61 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCG 120
Query: 120 QEEEAALHSLQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 162
QE + +Q L G +Y ++FT +++E+ T + YL
Sbjct: 121 QEVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL 163
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 13/154 (8%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQV---------- 71
+ ++G+T +GKS+ GN +LG F SR + VT C + R+ G +
Sbjct: 9 NLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEISLQ 68
Query: 72 VNVIDTPGLFDFSAGSEFVGKEIVKCI--GMAKDGIHAVLVVFSV-RSRFSQEEEAALHS 128
+ V+DTPG + V +E+ K + ++G+H L+V F QE ++
Sbjct: 69 IQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQEGLHLALLVHRADMPFFGQEASDSVQL 128
Query: 129 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYL 162
+Q L G +Y ++FT +++++ + E+YL
Sbjct: 129 IQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYL 162
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 14/162 (8%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRT------VLKDGQ----V 71
+ L G T +GKS+ GN ILG F S + VT C + R+ + + GQ
Sbjct: 9 NLALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQ 68
Query: 72 VNVIDTPGLFDFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVRSRFS-QEEEAALHS 128
V V+DTPG + V +E+ + + ++G+H L+V QEE + +
Sbjct: 69 VQVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQM 128
Query: 129 LQTLFGKKIFDYMIVVFTGGDELEDNDETLEDYLGRECPKPL 170
+Q L G +Y ++FT +++E+ ++YL RE + L
Sbjct: 129 IQELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETL 169
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 13 LTSPSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVV 72
LTS S+ +T+ LVG TG+G++AT N+I G++ +S ++ VT C+ + D +
Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPIN 933
Query: 73 NVIDTPG 79
N+IDTPG
Sbjct: 934 NMIDTPG 940
>sp|Q552Z6|GTPA_DICDI GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1
Length = 449
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 6/130 (4%)
Query: 19 GERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTP 78
E V+L+GRTG GKS+T N++ G +S S R V +G +N+IDTP
Sbjct: 150 NECNVLLLGRTGVGKSSTLNTVFG-IDIPVHSSESCTQDPFTYSRVV--NGFKLNIIDTP 206
Query: 79 GLFDFSAGSEFVGKEIVKCIG-MAKDGIHAVLVVFS-VRSRFSQEEEAALHSLQTLFGKK 136
G D S G ++K ++ IH VL V +RF + ++ G +
Sbjct: 207 GFLD-SQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQ 265
Query: 137 IFDYMIVVFT 146
++ VV T
Sbjct: 266 LWRNAAVVLT 275
>sp|Q5SM23|ERA_THET8 GTPase Era OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM
579) GN=era PE=1 SV=1
Length = 301
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDG--QVVNVIDTPGL 80
V +VG+ GKS N++LG K S +T + R +L +G Q+V +DTPGL
Sbjct: 10 VAIVGKPNVGKSTLLNNLLG---VKVAPISPRPQTTRKRLRGILTEGRRQIV-FVDTPGL 65
Query: 81 F-DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 135
A EF+ +E+ + + ++AV+ V +R + E+E +L+ L GK
Sbjct: 66 HKPMDALGEFMDQEVYEALA----DVNAVVWVVDLRHPPTPEDELVARALKPLVGK 117
>sp|Q1Q7V4|MNME_PSYCK tRNA modification GTPase MnmE OS=Psychrobacter cryohalolentis
(strain K5) GN=mnmE PE=3 SV=2
Length = 478
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 10/139 (7%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVIDTPGL 80
VVL GR GKS S+L R A + RA + V T +Q TV+ +G +++ DT GL
Sbjct: 233 VVLAGRPNAGKS----SLLNRLAGQERAIVTDVAGTTRDTLQETVVLNGLTLHLTDTAGL 288
Query: 81 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIFDY 140
+ E +G E + D +L+V+ V +R +EE L + LFG+
Sbjct: 289 RETEDTVERIGIERARTAIAQAD---MLLMVYDV-TRDLEEESTPLQLAEQLFGELPEAK 344
Query: 141 MIVVFTGGDELEDNDETLE 159
+++ +L +N+ + E
Sbjct: 345 RLLIIANKSDLLNNNSSKE 363
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLFD 82
++++G+TG GKSAT NSI G+ ++ A G E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 83 FSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVR-----SRFSQEEEAALHSLQTLFGKKI 137
S+ S ++I+ I +V++ R R+S + + L + +FG I
Sbjct: 227 LSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYS--DFSLLQLITEIFGAAI 284
Query: 138 FDYMIVVFT 146
+ I+V T
Sbjct: 285 WLNTILVMT 293
>sp|Q89A14|DER_BUCBP GTPase Der OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=der PE=3 SV=1
Length = 462
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 81
T+ L+GRT GKS N + G R ++ + +T + ++ + ++V +IDTPG+
Sbjct: 4 TIALIGRTNVGKSTLFNKLTGNRNDALASNHASLTRDRKHGFIIVNNTKIV-LIDTPGIN 62
Query: 82 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKKIF 138
+ S + KEI + + + V +V S R++ ++ + L+ F KKIF
Sbjct: 63 EDSKKKISLDKEIFEQVKFSIKQADLVCLVVSARNKLMHKDVEIIEMLRK-FQKKIF 118
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 81
T++++G+ G GKS+T NSI+G R S + R+ + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 82 DFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRS-RFSQEEEAALHSLQTLFGKKIFDY 140
+ ++ + I+K + K I +L V + + R ++ ++ FGK I++
Sbjct: 99 EGGYIND-MALNIIKSFLLDK-TIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK 156
Query: 141 MIVVFT 146
IV T
Sbjct: 157 AIVALT 162
>sp|Q3YRS0|ERA_EHRCJ GTPase Era OS=Ehrlichia canis (strain Jake) GN=era PE=3 SV=1
Length = 296
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 25 LVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV-IDTPGLFDF 83
+VG T GKS N ++GR K A + V +T VL + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGR---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 84 SAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAAL 126
E K IVK M+ GI V+++ V++ ++ E +
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKII 109
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFK-SRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGL 80
TV+++G+ G GKS+T NS++G +A S S G+ T + RT + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL-VSRT--RSGFTLNIIDTPGL 96
Query: 81 FD 82
+
Sbjct: 97 IE 98
>sp|Q48BF3|MNME_PSE14 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVG-KEIVKCIGMA 101
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q87TS2|MNME_PSESM tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVG-KEIVKCIGMA 101
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q4ZL12|MNME_PSEU2 tRNA modification GTPase MnmE OS=Pseudomonas syringae pv. syringae
(strain B728a) GN=mnmE PE=3 SV=1
Length = 456
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVG-KEIVKCIGMA 101
T GL D E +G + +K IG A
Sbjct: 271 TAGLRDTQDQVEMIGVQRALKAIGEA 296
>sp|Q31DJ0|MNME_THICR tRNA modification GTPase MnmE OS=Thiomicrospira crunogena (strain
XCL-2) GN=mnmE PE=3 SV=2
Length = 451
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
+VV++GR GKS+ N++ GR S+ VT R ++K DG ++V+D
Sbjct: 219 SVVILGRPNAGKSSLLNALSGRE-------SAIVTDIAGTTRDIVKEEIQIDGMPLHVLD 271
Query: 77 TPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGKK 136
T GL + + E +G ++ A + +LV+ E++A L + +
Sbjct: 272 TAGLREATDAVEQIG---IQRAWAAIEEADRILVMVQANEAIHPEDQAILEKMPSHIPVT 328
Query: 137 IFDYMIVVFTGGDELEDNDETLEDYL 162
+ I + EL +ND E +L
Sbjct: 329 LIHNKIDLIEKSPELSENDGETEIWL 354
>sp|A8GM80|ERA_RICAH GTPase Era OS=Rickettsia akari (strain Hartford) GN=era PE=3 SV=1
Length = 293
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------LKDGQVVNVI 75
+V ++GR +GKS N I+G + S VT + R++ LKD QV+ +
Sbjct: 8 SVCIIGRPNSGKSTLLNRIIGEKL-------SIVTPKVQTTRSIITGIITLKDTQVI-LY 59
Query: 76 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 135
DTPG+F+ E K +V+C + V+++ F L L++L
Sbjct: 60 DTPGIFEPKGSLE---KAMVRCAWSSLHSADLVMLIIDSLKPFDDVTHDILDKLRSLNIV 116
Query: 136 KIF 138
IF
Sbjct: 117 PIF 119
>sp|A8MIS4|ENGB_ALKOO Probable GTP-binding protein EngB OS=Alkaliphilus oremlandii
(strain OhILAs) GN=engB PE=3 SV=1
Length = 208
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 14/106 (13%)
Query: 16 PSNGERTVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVN-- 73
P NG + L GR+ GKS+T N+IL RR ++S G T T +VN
Sbjct: 19 PENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINF--------YIVNNE 70
Query: 74 --VIDTP--GLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVR 115
++D P G S G + ++++ ++ ++ V+++ +R
Sbjct: 71 FHIVDLPGYGYAKVSKGEKETWGKMMETYLSSRKNLYEVILLVDIR 116
>sp|O23680|TOC33_ARATH Translocase of chloroplast 33, chloroplastic OS=Arabidopsis
thaliana GN=TOC33 PE=1 SV=1
Length = 297
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 67/128 (52%), Gaps = 9/128 (7%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNVIDTPGLF 81
TV+++G+ G GKS+T NS++G + + + + RT+ G +N+IDTPGL
Sbjct: 38 TVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTM--GGFTINIIDTPGLV 95
Query: 82 DFSAGSEFVGKEIVKCIG--MAKDGIHAVLVVFSVR-SRFSQEEEAALHSLQTLFGKKIF 138
+ AG +V + ++ I + I +L V + R + ++ + ++ FGK+I+
Sbjct: 96 E--AG--YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIW 151
Query: 139 DYMIVVFT 146
++V T
Sbjct: 152 CKTLLVLT 159
>sp|A4Y199|MNME_PSEMY tRNA modification GTPase MnmE OS=Pseudomonas mendocina (strain ymp)
GN=mnmE PE=3 SV=1
Length = 455
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVGKE-IVKCIGMA 101
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTDDQVERIGVERALKAIGEA 296
>sp|A6VF44|MNME_PSEA7 tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
PA7) GN=mnmE PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVGKE-IVKCIGMA 101
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q02DE1|MNME_PSEAB tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
UCBPP-PA14) GN=mnmE PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVGKE-IVKCIGMA 101
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q92JA9|ERA_RICCN GTPase Era OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=era PE=3 SV=1
Length = 339
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 24/105 (22%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV------LKDGQVVNVI 75
+V ++GR +GKS N I+G + S VT + R++ LKD QV+ +
Sbjct: 54 SVCIIGRPNSGKSTLLNRIIGEKL-------SIVTPKVQTTRSIITGIITLKDTQVI-LY 105
Query: 76 DTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHA----VLVVFSVRS 116
DTPG+F+ E K +V+C A +H+ +L++ S++S
Sbjct: 106 DTPGIFEPKGSLE---KAMVRC---AWSSLHSADLVLLIIDSLKS 144
>sp|Q9HT07|MNME_PSEAE tRNA modification GTPase MnmE OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=mnmE
PE=3 SV=1
Length = 455
Score = 39.3 bits (90), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R VL+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTDIAGTTRDVLREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVGKE-IVKCIGMA 101
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTEDHVEKIGVERALKAIGEA 296
>sp|Q3K429|MNME_PSEPF tRNA modification GTPase MnmE OS=Pseudomonas fluorescens (strain
Pf0-1) GN=mnmE PE=3 SV=1
Length = 456
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 22 TVVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLK-----DGQVVNVID 76
TVV+ GR GKS+ N++ GR A + VT R +L+ DG ++V+D
Sbjct: 218 TVVIAGRPNAGKSSLLNALAGREA-------AIVTEIAGTTRDILREHIHIDGMPLHVVD 270
Query: 77 TPGLFDFSAGSEFVGKE-IVKCIGMA 101
T GL D E +G E +K IG A
Sbjct: 271 TAGLRDTDDHVEKIGVERALKAIGEA 296
>sp|Q2GGZ1|ERA_EHRCR GTPase Era OS=Ehrlichia chaffeensis (strain Arkansas) GN=era PE=3
SV=1
Length = 296
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 25 LVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTVLKDGQVVNV-IDTPGLFDF 83
+VG T GKS N ++G+ K A + V +T VL + V + IDTPG+F
Sbjct: 13 IVGTTNAGKSTLINMLVGQ---KVAAVTPKVQTTRVRMHAVLNNENVQLIFIDTPGIFSP 69
Query: 84 SAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAAL 126
E K IVK M+ GI V+++ V++ ++ E +
Sbjct: 70 KTKLE---KFIVKHAWMSLKGIENVILLLDVKNYLNKHIEKII 109
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 14 TSPSNGERT--------VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV 65
TSP+ GE V L+G GKS N ++G K + V +T + R +
Sbjct: 5 TSPAGGETEATQTRSGFVALIGAPNAGKSTLVNQLVGT---KVSIVTHKVQTTRALVRGI 61
Query: 66 LKDG--QVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEE 123
+G Q+V ++DTPG+F + G AKD +LV+ + F++ E
Sbjct: 62 FIEGPAQIV-LVDTPGIF--RPKRRLDRAMVTTAWGGAKDA-DIILVIIDAQGGFNENAE 117
Query: 124 AALHSLQTLFGKKIF 138
A L S++ + KK+
Sbjct: 118 ALLESMKDVRQKKVL 132
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 39.3 bits (90), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 14 TSPSNGERT--------VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMQRTV 65
TSP+ GE V L+G GKS N ++G K + V +T + R +
Sbjct: 5 TSPAGGETEATQTRSGFVALIGAPNAGKSTLVNQLVGT---KVSIVTHKVQTTRALVRGI 61
Query: 66 LKDG--QVVNVIDTPGLFDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEE 123
+G Q+V ++DTPG+F + G AKD +LV+ + F++ E
Sbjct: 62 FIEGPAQIV-LVDTPGIF--RPKRRLDRAMVTTAWGGAKDA-DIILVIIDAQGGFNENAE 117
Query: 124 AALHSLQTLFGKKIF 138
A L S++ + KK+
Sbjct: 118 ALLESMKDVRQKKVL 132
>sp|Q4FPR8|MNME_PSYA2 tRNA modification GTPase MnmE OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=mnmE PE=3 SV=1
Length = 478
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 23 VVLVGRTGNGKSATGNSILGRRAFKSRASSSGVTSTCE--MQRTVLKDGQVVNVIDTPGL 80
VVL GR GKS S+L R A + RA + V T +Q TV+ +G +++ DT GL
Sbjct: 233 VVLAGRPNAGKS----SLLNRLAGQERAIVTDVAGTTRDTLQETVVLNGLTLHLTDTAGL 288
Query: 81 FDFSAGSEFVGKEIVKCIGMAKDGIHAVLVVFSVRSRFSQEEEAALHSLQTLFGK 135
+ E +G E + D +L+V+ V +EE L + LFG+
Sbjct: 289 RETEDTVERIGIERARTAITQAD---ILLMVYDVTCDL-EEEITPLQLAEQLFGE 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,606,667
Number of Sequences: 539616
Number of extensions: 2670783
Number of successful extensions: 13475
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 634
Number of HSP's that attempted gapping in prelim test: 13112
Number of HSP's gapped (non-prelim): 810
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)