Query 030626
Match_columns 174
No_of_seqs 179 out of 1068
Neff 9.2
Searched_HMMs 29240
Date Tue Mar 26 03:09:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030626.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030626hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdl_B Protein (anthranilate s 100.0 7.9E-36 2.7E-40 219.9 16.7 150 6-162 38-193 (195)
2 1wl8_A GMP synthase [glutamine 100.0 1.1E-33 3.9E-38 207.4 17.4 149 7-164 37-186 (189)
3 2a9v_A GMP synthase; structura 100.0 5.3E-34 1.8E-38 212.7 13.3 149 13-171 54-206 (212)
4 1i1q_B Anthranilate synthase c 100.0 2E-33 6.7E-38 206.6 15.6 144 13-165 47-190 (192)
5 2vpi_A GMP synthase; guanine m 100.0 5.9E-33 2E-37 207.8 10.9 149 6-165 60-211 (218)
6 2ywb_A GMP synthase [glutamine 100.0 1.2E-32 4.1E-37 228.3 12.7 148 6-164 35-184 (503)
7 3fij_A LIN1909 protein; 11172J 100.0 8.7E-32 3E-36 205.7 15.6 149 13-166 61-242 (254)
8 1a9x_B Carbamoyl phosphate syn 100.0 1.1E-31 3.8E-36 214.3 16.5 151 6-168 224-377 (379)
9 1gpm_A GMP synthetase, XMP ami 100.0 2.4E-32 8.2E-37 227.5 12.8 149 6-164 43-201 (525)
10 3tqi_A GMP synthase [glutamine 100.0 8.3E-33 2.8E-37 230.3 9.2 150 7-165 47-205 (527)
11 3uow_A GMP synthetase; structu 100.0 5.4E-32 1.8E-36 226.4 11.6 153 7-164 44-229 (556)
12 1o1y_A Conserved hypothetical 100.0 9.1E-30 3.1E-34 192.9 14.9 140 13-167 57-203 (239)
13 3l7n_A Putative uncharacterize 100.0 3.2E-30 1.1E-34 195.1 12.4 140 13-165 45-195 (236)
14 2vxo_A GMP synthase [glutamine 100.0 1.6E-30 5.6E-35 221.6 11.2 145 6-161 65-211 (697)
15 3m3p_A Glutamine amido transfe 100.0 5.4E-30 1.9E-34 195.0 10.0 127 13-148 48-180 (250)
16 3r75_A Anthranilate/para-amino 100.0 3.7E-30 1.3E-34 217.8 9.3 146 12-167 485-636 (645)
17 2w7t_A CTP synthetase, putativ 100.0 1.2E-29 4.1E-34 195.6 6.3 153 13-167 67-257 (273)
18 1l9x_A Gamma-glutamyl hydrolas 100.0 2.5E-29 8.5E-34 197.4 6.1 152 13-166 86-278 (315)
19 2v4u_A CTP synthase 2; pyrimid 100.0 1.4E-28 4.8E-33 191.0 10.3 154 13-168 90-278 (289)
20 4gud_A Imidazole glycerol phos 100.0 1.6E-29 5.3E-34 188.2 3.9 148 6-166 35-206 (211)
21 3d54_D Phosphoribosylformylgly 100.0 8.8E-28 3E-32 178.7 12.3 145 13-164 41-211 (213)
22 2ywj_A Glutamine amidotransfer 99.9 2.4E-28 8.3E-33 178.5 6.9 137 13-165 37-184 (186)
23 1s1m_A CTP synthase; CTP synth 99.9 1.5E-27 5.2E-32 197.5 8.8 158 12-170 342-542 (545)
24 1vco_A CTP synthetase; tetrame 99.9 2E-27 6.8E-32 197.0 6.2 155 13-168 355-547 (550)
25 3nva_A CTP synthase; rossman f 99.9 4E-27 1.4E-31 192.7 7.0 152 13-165 350-533 (535)
26 1gpw_B Amidotransferase HISH; 99.9 6.1E-27 2.1E-31 173.0 0.6 143 12-165 41-198 (201)
27 2nv0_A Glutamine amidotransfer 99.9 2.4E-25 8.1E-30 163.8 8.6 141 13-166 38-189 (196)
28 1q7r_A Predicted amidotransfer 99.9 7.7E-26 2.6E-30 169.3 5.0 146 13-169 60-214 (219)
29 2ywd_A Glutamine amidotransfer 99.9 7.1E-25 2.4E-29 160.5 6.3 137 13-164 39-189 (191)
30 1ka9_H Imidazole glycerol phos 99.9 3.1E-25 1.1E-29 163.8 4.4 136 13-164 40-200 (200)
31 2iss_D Glutamine amidotransfer 99.9 1.9E-24 6.6E-29 160.4 4.9 136 13-164 57-207 (208)
32 2abw_A PDX2 protein, glutamina 99.9 3.6E-23 1.2E-27 155.5 6.1 150 7-168 39-217 (227)
33 2vdj_A Homoserine O-succinyltr 99.9 4.5E-22 1.5E-26 154.5 10.0 136 6-148 92-239 (301)
34 2h2w_A Homoserine O-succinyltr 99.9 3.4E-22 1.2E-26 155.6 7.8 136 9-148 107-250 (312)
35 1jvn_A Glutamine, bifunctional 99.8 5.2E-23 1.8E-27 172.2 -0.5 142 13-163 44-214 (555)
36 3ugj_A Phosphoribosylformylgly 99.2 1E-10 3.6E-15 105.3 11.6 150 13-164 1092-1302(1303)
37 1fy2_A Aspartyl dipeptidase; s 97.7 8.1E-06 2.8E-10 60.9 1.3 50 6-59 74-130 (229)
38 1oi4_A Hypothetical protein YH 97.7 1.8E-05 6E-10 57.3 2.7 47 12-58 85-134 (193)
39 3l4e_A Uncharacterized peptida 97.6 1.2E-05 4.2E-10 59.0 0.9 47 7-57 75-128 (206)
40 4hcj_A THIJ/PFPI domain protei 97.6 1.8E-05 6.3E-10 56.6 1.7 52 7-58 63-117 (177)
41 1vhq_A Enhancing lycopene bios 97.5 2.4E-05 8.1E-10 58.3 1.0 49 12-60 89-151 (232)
42 3l18_A Intracellular protease 97.5 1.9E-05 6.4E-10 55.7 0.3 47 12-58 62-111 (168)
43 3f5d_A Protein YDEA; unknow pr 97.4 0.00023 7.9E-09 52.0 5.0 46 13-58 63-109 (206)
44 2vrn_A Protease I, DR1199; cys 97.2 5E-05 1.7E-09 54.6 0.3 47 12-58 74-124 (190)
45 2rk3_A Protein DJ-1; parkinson 97.2 8.6E-05 2.9E-09 53.7 1.2 52 7-58 59-115 (197)
46 3l3b_A ES1 family protein; ssg 97.2 0.00016 5.3E-09 54.3 2.4 48 12-59 106-168 (242)
47 3cne_A Putative protease I; st 97.2 0.00012 4E-09 52.0 1.4 47 12-58 65-120 (175)
48 2ab0_A YAJL; DJ-1/THIJ superfa 97.1 8.5E-05 2.9E-09 54.2 -0.0 53 6-58 59-116 (205)
49 3gra_A Transcriptional regulat 97.0 0.00066 2.2E-08 49.4 4.4 47 12-58 70-117 (202)
50 2fex_A Conserved hypothetical 97.0 0.00032 1.1E-08 50.3 2.5 46 13-58 63-110 (188)
51 1u9c_A APC35852; structural ge 96.9 0.00017 5.7E-09 53.2 0.5 47 12-58 88-138 (224)
52 3efe_A THIJ/PFPI family protei 96.9 0.00049 1.7E-08 50.4 2.8 47 12-58 73-121 (212)
53 4e08_A DJ-1 beta; flavodoxin-l 96.7 0.00023 7.7E-09 51.2 -0.3 51 8-58 62-116 (190)
54 3er6_A Putative transcriptiona 96.7 0.0008 2.7E-08 49.2 2.5 46 13-58 74-124 (209)
55 3noq_A THIJ/PFPI family protei 96.6 0.0018 6.1E-08 48.1 4.1 46 13-58 65-113 (231)
56 3n7t_A Macrophage binding prot 96.6 0.00032 1.1E-08 52.8 -0.2 48 11-58 103-154 (247)
57 3kkl_A Probable chaperone prot 96.4 0.00047 1.6E-08 51.7 -0.4 47 12-58 97-147 (244)
58 1rw7_A YDR533CP; alpha-beta sa 96.2 0.00042 1.4E-08 51.9 -1.3 46 13-58 98-147 (243)
59 3uk7_A Class I glutamine amido 96.2 0.0013 4.4E-08 52.6 1.4 47 12-58 281-330 (396)
60 3ewn_A THIJ/PFPI family protei 96.2 0.0028 9.7E-08 47.7 3.0 46 13-58 84-133 (253)
61 3fse_A Two-domain protein cont 96.0 0.0013 4.6E-08 52.1 0.6 47 12-58 72-121 (365)
62 3ot1_A 4-methyl-5(B-hydroxyeth 96.0 0.00042 1.4E-08 50.6 -2.3 47 12-58 70-121 (208)
63 3ej6_A Catalase-3; heme, hydro 96.0 0.0089 3E-07 50.9 5.2 49 10-58 587-646 (688)
64 3mgk_A Intracellular protease/ 95.9 0.0013 4.3E-08 48.2 -0.1 45 14-58 66-113 (211)
65 3uk7_A Class I glutamine amido 95.9 0.002 6.8E-08 51.5 1.0 47 12-58 88-137 (396)
66 1n57_A Chaperone HSP31, protei 95.9 0.0016 5.6E-08 50.0 0.4 47 12-58 144-194 (291)
67 3bhn_A THIJ/PFPI domain protei 95.8 0.0026 8.9E-08 47.4 1.1 45 13-58 80-128 (236)
68 3ttv_A Catalase HPII; heme ori 95.1 0.0038 1.3E-07 53.6 0.0 47 11-58 659-708 (753)
69 2iuf_A Catalase; oxidoreductas 94.7 0.025 8.6E-07 48.3 4.1 49 10-58 580-648 (688)
70 1sy7_A Catalase 1; heme oxidat 94.6 0.011 3.9E-07 50.7 1.8 49 12-60 594-646 (715)
71 4gdh_A DJ-1, uncharacterized p 93.3 0.034 1.2E-06 39.9 1.9 45 13-58 73-122 (194)
72 2r47_A Uncharacterized protein 89.8 0.066 2.2E-06 37.0 0.2 39 12-50 83-125 (157)
73 3en0_A Cyanophycinase; serine 86.4 0.26 8.9E-06 37.7 1.6 50 6-57 105-160 (291)
74 3ff4_A Uncharacterized protein 83.0 3.1 0.0001 27.4 5.5 45 4-54 73-117 (122)
75 1ehs_A STB, heat-stable entero 80.8 0.26 9E-06 25.6 -0.3 17 44-60 31-47 (48)
76 2him_A L-asparaginase 1; hydro 70.5 3.7 0.00013 32.3 3.5 46 2-47 242-289 (358)
77 2f48_A Diphosphate--fructose-6 70.3 1.1 3.7E-05 37.5 0.5 53 5-57 158-225 (555)
78 2hig_A 6-phospho-1-fructokinas 70.1 0.96 3.3E-05 37.1 0.1 54 4-57 180-246 (487)
79 1agx_A Glutaminase-asparaginas 67.7 7.1 0.00024 30.3 4.6 45 2-48 228-275 (331)
80 1o7j_A L-asparaginase; atomic 66.7 5.4 0.00018 30.9 3.7 44 2-47 230-275 (327)
81 2wlt_A L-asparaginase; hydrola 65.3 5.9 0.0002 30.7 3.7 45 2-48 231-277 (332)
82 1wls_A L-asparaginase; structu 64.8 11 0.00037 29.2 5.1 46 2-48 212-260 (328)
83 1nns_A L-asparaginase II; amid 64.1 6.5 0.00022 30.4 3.7 45 2-48 224-270 (326)
84 1wsa_A Asparaginase, asparagin 64.1 6.4 0.00022 30.5 3.7 45 2-48 228-274 (330)
85 1eiw_A Hypothetical protein MT 63.4 4.9 0.00017 26.0 2.5 36 13-48 38-73 (111)
86 3nxk_A Cytoplasmic L-asparagin 63.3 7.2 0.00025 30.3 3.9 44 3-48 235-280 (334)
87 3pfn_A NAD kinase; structural 62.9 5 0.00017 31.6 2.9 34 13-52 108-142 (365)
88 3hno_A Pyrophosphate-dependent 61.6 1.4 4.7E-05 35.5 -0.5 54 5-58 96-162 (419)
89 4pga_A Glutaminase-asparaginas 61.5 8.3 0.00029 30.0 3.9 45 2-48 234-280 (337)
90 1zq1_A Glutamyl-tRNA(Gln) amid 59.4 9.8 0.00034 30.7 4.1 45 2-48 317-363 (438)
91 2d6f_A Glutamyl-tRNA(Gln) amid 59.3 10 0.00034 30.7 4.1 45 2-48 314-360 (435)
92 1t0b_A THUA-like protein; treh 55.4 59 0.002 23.9 11.6 82 13-98 67-152 (252)
93 2a6a_A Hypothetical protein TM 53.3 4.7 0.00016 29.3 1.2 44 13-57 66-111 (218)
94 2an1_A Putative kinase; struct 53.0 5.5 0.00019 29.9 1.6 35 12-52 62-97 (292)
95 1yt5_A Inorganic polyphosphate 51.1 3.7 0.00013 30.5 0.4 35 12-52 40-74 (258)
96 1z0s_A Probable inorganic poly 50.9 3.2 0.00011 31.4 -0.0 34 13-52 68-101 (278)
97 2i2c_A Probable inorganic poly 50.6 3.7 0.00013 30.8 0.3 34 13-52 35-71 (272)
98 3o8l_A 6-phosphofructokinase, 50.0 3.7 0.00013 35.6 0.2 55 5-59 481-549 (762)
99 4a3s_A 6-phosphofructokinase; 44.8 16 0.00054 28.1 3.0 47 5-57 85-144 (319)
100 3iwp_A Copper homeostasis prot 43.4 37 0.0013 25.7 4.8 46 4-49 170-216 (287)
101 1zxx_A 6-phosphofructokinase; 43.4 3.9 0.00013 31.6 -0.6 47 5-57 85-144 (319)
102 3afo_A NADH kinase POS5; alpha 41.8 7.3 0.00025 30.9 0.7 34 13-52 114-149 (388)
103 1pfk_A Phosphofructokinase; tr 40.6 4.6 0.00016 31.2 -0.6 47 5-57 86-145 (320)
104 3r6m_A YEAZ, resuscitation pro 36.5 7.9 0.00027 28.0 0.2 43 13-56 56-100 (213)
105 3tb6_A Arabinose metabolism tr 36.4 81 0.0028 22.6 5.8 44 4-49 62-106 (298)
106 1u0t_A Inorganic polyphosphate 36.2 5.2 0.00018 30.5 -0.9 34 12-51 74-108 (307)
107 3bbn_B Ribosomal protein S2; s 36.0 36 0.0012 24.9 3.7 30 13-49 157-187 (231)
108 3qk7_A Transcriptional regulat 35.9 76 0.0026 23.0 5.6 21 4-24 56-76 (294)
109 1vi6_A 30S ribosomal protein S 34.9 46 0.0016 23.9 4.0 31 13-49 115-145 (208)
110 2nrr_A Uvrabc system protein C 34.7 21 0.00071 24.6 2.0 35 14-51 80-114 (159)
111 3bbl_A Regulatory protein of L 34.4 86 0.003 22.6 5.7 39 4-48 55-93 (287)
112 2gel_A Putative GRAM negative 34.3 17 0.00058 26.4 1.7 43 13-55 55-99 (231)
113 3j20_B 30S ribosomal protein S 33.7 48 0.0017 23.7 3.9 31 13-49 111-141 (202)
114 3jy6_A Transcriptional regulat 33.6 60 0.002 23.3 4.6 39 4-49 54-92 (276)
115 3qvl_A Putative hydantoin race 32.7 1.4E+02 0.0048 21.7 6.5 48 10-64 66-113 (245)
116 3kke_A LACI family transcripti 32.6 78 0.0027 23.1 5.2 40 4-49 62-101 (303)
117 3k4h_A Putative transcriptiona 32.1 94 0.0032 22.3 5.6 19 5-23 61-79 (292)
118 2rgy_A Transcriptional regulat 31.8 85 0.0029 22.6 5.3 39 5-49 59-97 (290)
119 3fef_A Putative glucosidase LP 31.3 59 0.002 26.2 4.5 51 4-58 128-178 (450)
120 3hcw_A Maltose operon transcri 31.3 1.1E+02 0.0036 22.2 5.8 20 4-23 59-78 (295)
121 3huu_A Transcription regulator 31.1 94 0.0032 22.6 5.5 20 4-23 74-93 (305)
122 3rot_A ABC sugar transporter, 30.9 94 0.0032 22.5 5.4 19 4-22 52-70 (297)
123 2eq5_A 228AA long hypothetical 30.9 1.4E+02 0.0046 21.0 6.1 40 8-54 70-110 (228)
124 3l9c_A 3-dehydroquinate dehydr 30.6 30 0.001 25.7 2.5 58 7-64 166-231 (259)
125 1iuk_A Hypothetical protein TT 30.3 1E+02 0.0035 20.2 5.0 46 6-57 87-133 (140)
126 3bch_A 40S ribosomal protein S 30.0 61 0.0021 24.1 4.0 11 39-49 171-181 (253)
127 2fep_A Catabolite control prot 29.8 1E+02 0.0035 22.2 5.4 19 4-22 63-81 (289)
128 3ksm_A ABC-type sugar transpor 29.7 98 0.0034 21.9 5.2 18 5-22 50-68 (276)
129 3o74_A Fructose transport syst 29.5 1.1E+02 0.0039 21.5 5.6 20 4-23 49-68 (272)
130 3l6u_A ABC-type sugar transpor 29.4 97 0.0033 22.2 5.2 41 4-48 55-95 (293)
131 3g1w_A Sugar ABC transporter; 29.2 1E+02 0.0034 22.3 5.3 20 4-23 52-71 (305)
132 2nqb_D Histone H2B; nucleosome 28.9 29 0.001 22.8 1.9 26 142-167 45-70 (123)
133 2ioy_A Periplasmic sugar-bindi 28.7 1.2E+02 0.004 21.8 5.5 19 4-22 48-66 (283)
134 4fxs_A Inosine-5'-monophosphat 28.5 84 0.0029 25.6 5.0 61 4-64 284-360 (496)
135 3u95_A Glycoside hydrolase, fa 28.0 44 0.0015 27.1 3.3 54 4-62 141-197 (477)
136 2xzm_B RPS0E; ribosome, transl 28.0 47 0.0016 24.4 3.1 11 39-49 134-144 (241)
137 3usb_A Inosine-5'-monophosphat 27.5 1.1E+02 0.0038 24.9 5.6 61 6-66 311-387 (511)
138 1tzy_B Histone H2B; histone-fo 27.4 32 0.0011 22.7 1.9 26 142-167 48-73 (126)
139 1hdj_A Human HSP40, HDJ-1; mol 27.2 63 0.0021 18.6 3.1 26 138-163 26-51 (77)
140 1uf3_A Hypothetical protein TT 27.0 68 0.0023 22.1 3.9 41 9-49 28-70 (228)
141 3egc_A Putative ribose operon 26.6 63 0.0021 23.3 3.7 20 5-24 56-75 (291)
142 2fn9_A Ribose ABC transporter, 26.3 1.4E+02 0.0047 21.3 5.6 19 4-22 49-67 (290)
143 3gbv_A Putative LACI-family tr 26.2 90 0.0031 22.5 4.5 18 5-22 61-78 (304)
144 1u8x_X Maltose-6'-phosphate gl 26.1 74 0.0025 25.8 4.3 55 4-62 153-211 (472)
145 2ys8_A RAB-related GTP-binding 26.1 53 0.0018 19.8 2.7 27 138-164 50-76 (90)
146 3d8u_A PURR transcriptional re 26.0 94 0.0032 22.0 4.6 39 4-48 50-88 (275)
147 3psh_A Protein HI_1472; substr 25.8 1.3E+02 0.0044 22.4 5.5 39 5-50 76-114 (326)
148 3m9w_A D-xylose-binding peripl 25.7 1E+02 0.0034 22.5 4.8 19 4-22 49-67 (313)
149 2zkq_b 40S ribosomal protein S 25.3 76 0.0026 24.1 3.9 31 13-49 118-148 (295)
150 2nrt_A Uvrabc system protein C 25.3 35 0.0012 24.8 2.0 35 14-51 85-119 (220)
151 2vk2_A YTFQ, ABC transporter p 24.3 1.3E+02 0.0046 21.8 5.2 20 4-23 49-68 (306)
152 3l49_A ABC sugar (ribose) tran 24.2 71 0.0024 22.9 3.6 19 4-22 52-70 (291)
153 1ybx_A Conserved hypothetical 24.1 1.7E+02 0.0057 19.6 7.1 50 115-166 66-115 (143)
154 3h5o_A Transcriptional regulat 24.0 1.4E+02 0.0048 22.1 5.3 39 4-48 109-147 (339)
155 3sr7_A Isopentenyl-diphosphate 24.0 1.5E+02 0.0053 23.0 5.6 62 6-67 223-307 (365)
156 3o1i_D Periplasmic protein TOR 23.8 1.1E+02 0.0038 22.0 4.6 40 4-48 54-93 (304)
157 2h3h_A Sugar ABC transporter, 23.7 1.5E+02 0.0052 21.5 5.4 18 5-22 49-66 (313)
158 4hn9_A Iron complex transport 23.2 1.2E+02 0.004 22.8 4.8 48 5-60 108-163 (335)
159 3cpr_A Dihydrodipicolinate syn 23.2 1.9E+02 0.0064 21.7 5.9 46 5-50 42-93 (304)
160 3e61_A Putative transcriptiona 23.2 88 0.003 22.3 3.9 38 4-49 55-93 (277)
161 3c3k_A Alanine racemase; struc 23.2 89 0.003 22.5 4.0 38 5-49 56-93 (285)
162 3h5t_A Transcriptional regulat 23.2 1.1E+02 0.0038 23.0 4.6 19 4-22 119-137 (366)
163 1dbq_A Purine repressor; trans 23.1 1.5E+02 0.0053 21.0 5.3 39 5-48 55-93 (289)
164 1tv5_A Dhodehase, dihydroorota 22.9 1.8E+02 0.0061 23.4 5.9 60 6-65 317-400 (443)
165 1s6y_A 6-phospho-beta-glucosid 22.6 95 0.0033 24.9 4.3 54 4-61 134-191 (450)
166 3tak_A DHDPS, dihydrodipicolin 22.5 65 0.0022 24.1 3.1 43 5-47 27-75 (291)
167 3opy_B 6-phosphofructo-1-kinas 22.3 11 0.00037 33.5 -1.5 49 5-57 654-720 (941)
168 3kjx_A Transcriptional regulat 22.1 1.2E+02 0.0041 22.6 4.6 39 4-48 115-153 (344)
169 3k9c_A Transcriptional regulat 21.9 71 0.0024 23.1 3.2 39 4-49 57-95 (289)
170 3o8o_A 6-phosphofructokinase s 21.8 11 0.00036 32.9 -1.6 53 5-57 475-541 (787)
171 3e3m_A Transcriptional regulat 21.7 1.2E+02 0.0043 22.6 4.7 39 4-48 117-155 (355)
172 3gv0_A Transcriptional regulat 21.6 1.7E+02 0.0058 20.9 5.3 17 6-22 59-75 (288)
173 2fvy_A D-galactose-binding per 21.4 1.9E+02 0.0065 20.7 5.6 41 5-49 51-91 (309)
174 3lft_A Uncharacterized protein 21.3 1.2E+02 0.0041 22.0 4.4 38 4-49 53-90 (295)
175 2o20_A Catabolite control prot 21.3 1.7E+02 0.0058 21.6 5.3 19 4-22 110-128 (332)
176 3uug_A Multiple sugar-binding 21.1 1.2E+02 0.0042 22.1 4.5 19 4-22 50-68 (330)
177 3s6o_A Polysaccharide deacetyl 20.9 58 0.002 24.8 2.6 30 137-166 260-289 (321)
178 8abp_A L-arabinose-binding pro 20.7 98 0.0034 22.3 3.8 19 4-22 48-66 (306)
179 3md9_A Hemin-binding periplasm 20.3 1.5E+02 0.005 21.1 4.6 51 5-61 51-110 (255)
180 3u5c_A 40S ribosomal protein S 20.3 1.1E+02 0.0037 22.7 3.8 11 39-49 137-147 (252)
181 3flu_A DHDPS, dihydrodipicolin 20.3 1.2E+02 0.004 22.8 4.1 45 5-49 33-83 (297)
182 2ctp_A DNAJ homolog subfamily 20.2 64 0.0022 18.6 2.2 26 138-163 30-55 (78)
No 1
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=100.00 E-value=7.9e-36 Score=219.93 Aligned_cols=150 Identities=43% Similarity=0.707 Sum_probs=124.5
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcc--hh-HHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEecc
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSG--IS-LQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDE 82 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~--~~-~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~ 82 (174)
.+++...++|||||+||++++.+.. .+ .+.+++...++|+||||+|||+|+.++||++.+.+. ..+|.+..+....
T Consensus 38 ~~~~~~~~~dglil~gG~~~~~~~~~~~~~~~~i~~~~~~~PvLGIC~G~QlL~~~~gg~v~~~~~-~~~g~~~~v~~~~ 116 (195)
T 1qdl_B 38 IKGIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYLGKRTPILGVCLGHQAIGYAFGAKIRRARK-VFHGKISNIILVN 116 (195)
T ss_dssp HHHHHHHCCSEEEECCCSSCTTSHHHHTTHHHHHHHHTTTSCEEEETHHHHHHHHHTTCEEEEEEE-EEEEEEEEEEECC
T ss_pred HHHHhhCCCCEEEECCCCCChhhhhhhhHHHHHHHHhcCCCcEEEEehHHHHHHHHhCCEEeccCC-CcCCCceEEEECC
Confidence 3466655799999999999988742 13 355555677899999999999999999999988763 4567666555542
Q ss_pred CCCC--CcccCCCCceeecccccceecccCCCCCCcEEEEEc-CCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHH
Q 030626 83 KGED--GLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWT-EDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRN 159 (174)
Q Consensus 83 ~~~~--~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s-~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~ 159 (174)
.+ ++|+++++.+.++++|++.+.. ++++++++|++ +++.++|++.++++ ++|+|||||+..++.+.+||++
T Consensus 117 --~~~~~l~~~~~~~~~v~~~H~~~v~~---l~~~~~vla~s~~~g~i~a~~~~~~~-~~gvQfHPE~~~~~~g~~l~~~ 190 (195)
T 1qdl_B 117 --NSPLSLYYGIAKEFKATRYHSLVVDE---VHRPLIVDAISAEDNEIMAIHHEEYP-IYGVQFHPESVGTSLGYKILYN 190 (195)
T ss_dssp --SSCCSTTTTCCSEEEEEEEEEEEEEC---CCTTEEEEEEESSSCCEEEEEESSSS-EEEESSBTTSTTCTTHHHHHHH
T ss_pred --CCHhHHHhcCCCceEEeccccchhhh---CCCCcEEEEEECCCCcEEEEEeCCCC-EEEEecCCCCCCCccHHHHHHH
Confidence 44 8999998889999999999975 67899999999 89999999998765 9999999999877889999999
Q ss_pred HHH
Q 030626 160 FIK 162 (174)
Q Consensus 160 f~~ 162 (174)
|++
T Consensus 191 f~~ 193 (195)
T 1qdl_B 191 FLN 193 (195)
T ss_dssp HHH
T ss_pred HHh
Confidence 997
No 2
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=100.00 E-value=1.1e-33 Score=207.37 Aligned_cols=149 Identities=28% Similarity=0.471 Sum_probs=120.0
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHc-CCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCC
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDSGISLQTVLEL-GPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE 85 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~-~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~ 85 (174)
+++...++|||||+||+ ++.+.....+.+++. ..++|+||||+|+|+|+.++||++.+.+. ..+|...... . ..
T Consensus 37 ~~~~~~~~dglil~Gg~-~~~~~~~~~~~i~~~~~~~~PilGIC~G~Q~l~~~~gg~v~~~~~-~~~G~~~~~~-~--~~ 111 (189)
T 1wl8_A 37 EEIKAMNPKGIIFSGGP-SLENTGNCEKVLEHYDEFNVPILGICLGHQLIAKFFGGKVGRGEK-AEYSLVEIEI-I--DE 111 (189)
T ss_dssp HHHHHTCCSEEEECCCS-CTTCCTTHHHHHHTGGGTCSCEEEETHHHHHHHHHHTCEEEECSC-CSCEEEEEEE-S--CC
T ss_pred HHhcccCCCEEEECCCC-ChhhhhhHHHHHHHHhhCCCeEEEEcHHHHHHHHHhCCceecCCC-cccCceeEEE-e--cC
Confidence 45555579999999999 776655445666653 78899999999999999999999998753 2355443322 2 36
Q ss_pred CCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHH
Q 030626 86 DGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMI 164 (174)
Q Consensus 86 ~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~ 164 (174)
+++|.++++.+.++++|++.+.. ++++++++|+++++.+++++.++++ ++|+|||||+..++++.++|++|++.|
T Consensus 112 ~~l~~~~~~~~~~~~~h~~~v~~---l~~~~~vla~s~~g~i~a~~~~~~~-~~gvQfHPE~~~~~~g~~l~~~f~~~~ 186 (189)
T 1wl8_A 112 XEIFKGLPKRLKVWESHMDEVKE---LPPKFKILARSETCPIEAMKHEELP-IYGVQFHPEVAHTEKGEEILRNFAKLC 186 (189)
T ss_dssp --CCTTSCSEEEEEECCSEEEEE---CCTTEEEEEEESSCSCSEEEESSSC-EEEESSCTTSTTSTTHHHHHHHHHHHH
T ss_pred chHHhCCCCceEEEEEeeeehhh---CCCCcEEEEEcCCCCEEEEEeCCce-EEEEecCCCcCCCcchHHHHHHHHHHH
Confidence 78898888888899999988865 6789999999999999999998765 999999999977788999999999876
No 3
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=100.00 E-value=5.3e-34 Score=212.69 Aligned_cols=149 Identities=25% Similarity=0.377 Sum_probs=120.5
Q ss_pred CCCEEEeCCC-CCCCCCcch---hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCCCCc
Q 030626 13 NPRGVLISPG-PGAPQDSGI---SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGL 88 (174)
Q Consensus 13 ~~dgiii~GG-~~~~~~~~~---~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~l 88 (174)
++|||||+|| ++++++... +.+.+ ...++|+||||+|||+|+.++||++.+.+. ..+|.. .+... ..+++
T Consensus 54 ~~DglIl~GG~p~~~~~~~~~~~l~~~~--~~~~~PiLGIC~G~Qll~~~lGg~v~~~~~-~~~G~~-~v~~~--~~~~l 127 (212)
T 2a9v_A 54 GLDGLVLSGGAPNIDEELDKLGSVGKYI--DDHNYPILGICVGAQFIALHFGASVVKAKH-PEFGKT-KVSVM--HSENI 127 (212)
T ss_dssp TCSEEEEEEECSCGGGTGGGHHHHHHHH--HHCCSCEEEETHHHHHHHHHTTCEEEEEEE-EEEEEE-EEEES--CCCGG
T ss_pred CCCEEEECCCCCCCCcccccchhHHHHH--HhCCCCEEEEChHHHHHHHHhCCEEEcCCC-cccCce-eeEEC--CCChh
Confidence 4899999999 898877522 22333 346799999999999999999999998752 234433 33333 35689
Q ss_pred ccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHHHHHH
Q 030626 89 LAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIVRKE 168 (174)
Q Consensus 89 ~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~~~~~ 168 (174)
++++++.+.++++|++.+.. ++++++++|+++++.++|++.++++ ++|+|||||+..++.+.+||++|++.+.+..
T Consensus 128 ~~~~~~~~~v~~~H~~~v~~---l~~~~~vlA~s~d~~i~ai~~~~~~-i~gvQfHPE~~~~~~g~~l~~~F~~~~~~~~ 203 (212)
T 2a9v_A 128 FGGLPSEITVWENHNDEIIN---LPDDFTLAASSATCQVQGFYHKTRP-IYATQFHPEVEHTQYGRDIFRNFIGICASYR 203 (212)
T ss_dssp GTTCCSEEEEEEEEEEEEES---CCTTEEEEEECSSCSCSEEEESSSS-EEEESSCTTSTTSTTHHHHHHHHHHHHHHHH
T ss_pred HhcCCCceEEEeEhhhhHhh---CCCCcEEEEEeCCCCEEEEEECCCC-EEEEEeCCCCCCCccHHHHHHHHHHHHHHhh
Confidence 99988888999999999976 6789999999999999999998655 9999999999877889999999999887765
Q ss_pred Hhh
Q 030626 169 AAD 171 (174)
Q Consensus 169 ~~~ 171 (174)
.+.
T Consensus 204 ~~~ 206 (212)
T 2a9v_A 204 EIQ 206 (212)
T ss_dssp HHH
T ss_pred hcc
Confidence 554
No 4
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=100.00 E-value=2e-33 Score=206.63 Aligned_cols=144 Identities=35% Similarity=0.676 Sum_probs=112.1
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCCCCcccCC
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGL 92 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 92 (174)
+.+++||+||++++.+.+...+.++....++|+||||+|||+|+.++||++.+.. ...+|....... ..+++|+++
T Consensus 47 ~~~~iil~gGpg~~~~~~~~~~l~~~~~~~~PilGIC~G~Qll~~~~Gg~v~~~~-~~~~g~~~~~~~---~~~~l~~~~ 122 (192)
T 1i1q_B 47 KNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG-EILHGKATSIEH---DGQAMFAGL 122 (192)
T ss_dssp SSEEEEECCCSSCGGGSTTHHHHHHHHBTTBCEEEETHHHHHHHHHTSCCCCC----CCSSEEEEEEE---CCCGGGTTS
T ss_pred cCCeEEECCCCcCchhCchHHHHHHHHhcCCCEEEECcChHHHHHHhCCEEEeCC-CcEecceeEEec---CCChHHhcC
Confidence 4567999999999887655444555566789999999999999999999998764 233554433321 356899999
Q ss_pred CCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHHH
Q 030626 93 SNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIV 165 (174)
Q Consensus 93 ~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~~ 165 (174)
++.+.++++|++.+.. ++++++++|.+ ++.++++++.+++ ++|+|||||+..++.|.++++||++.+.
T Consensus 123 ~~~~~v~~~H~~~v~~---lp~~~~v~a~~-~~~~~ai~~~~~~-~~gvQfHPE~~~~~~g~~il~nf~~~~~ 190 (192)
T 1i1q_B 123 ANPLPVARYHSLVGSN---VPAGLTINAHF-NGMVMAVRHDADR-VCGFQFHPESILTTQGARLLEQTLAWAQ 190 (192)
T ss_dssp CSSEEEEECCC---CC---CCTTCEEEEEE-TTEEEEEEETTTT-EEEESSBTTSTTCTTHHHHHHHHHHHHT
T ss_pred CCCcEEEechhhHhhh---CCCccEEEECC-CCcEEEEEECCCC-EEEEEccCcccCCcccHHHHHHHHHHHh
Confidence 8899999999999975 67889999954 5779999987765 9999999999878999999999998754
No 5
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.9e-33 Score=207.76 Aligned_cols=149 Identities=25% Similarity=0.426 Sum_probs=112.0
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcch--hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGI--SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 83 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~--~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~ 83 (174)
.+++...++|||||+||++++++... +.+.+ ...++|+||||+|||+|+.++||++.+.+. ..+|. ..+...
T Consensus 60 ~~~l~~~~~dglil~Gg~~~~~~~~~~~~~~~~--~~~~~PilGIC~G~Qll~~~~GG~v~~~~~-~~~G~-~~v~~~-- 133 (218)
T 2vpi_A 60 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAI--FTIGKPVLGICYGMQMMNKVFGGTVHKKSV-REDGV-FNISVD-- 133 (218)
T ss_dssp HHHHHHHTCSEEEEEC---------CCCCCGGG--GTSSCCEEEETHHHHHHHHHTTCCEEEEEE-CSCEE-EEEEEC--
T ss_pred hHHHhhcCCCEEEECCCCcccccccchhHHHHH--HHcCCCEEEEcHHHHHHHHHhCCceEeCCC-CcccE-EEEEEc--
Confidence 35665567999999999988764321 22222 356899999999999999999999998753 23443 344433
Q ss_pred CCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHH-H
Q 030626 84 GEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFI-K 162 (174)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~-~ 162 (174)
..++||+++++.+.++++|++.+.. ++++++++|++ ++.+++++..+++ ++|+|||||+..++.+.+||++|+ +
T Consensus 134 ~~~~l~~~l~~~~~v~~~H~~~v~~---l~~~~~vlA~s-~~~i~ai~~~~~~-i~gvQfHPE~~~~~~g~~l~~~F~~~ 208 (218)
T 2vpi_A 134 NTCSLFRGLQKEEVVLLTHGDSVDK---VADGFKVVARS-GNIVAGIANESKK-LYGAQFHPEVGLTENGKVILKNFLYD 208 (218)
T ss_dssp TTSGGGTTCCSEEEEEECSEEEESS---CCTTCEEEEEE-TTEEEEEEETTTT-EEEESSCTTSTTSTTHHHHHHHHHTT
T ss_pred cCChhHhcCCCCcEEeehhhhHhhh---cCCCCEEEEEc-CCeEEEEEECCCC-EEEEEcCCCCCCChhHHHHHHHHHHH
Confidence 4678999998888999999999976 67899999999 5689999987765 999999999987788999999999 6
Q ss_pred HHH
Q 030626 163 MIV 165 (174)
Q Consensus 163 ~~~ 165 (174)
.+.
T Consensus 209 ~~~ 211 (218)
T 2vpi_A 209 IAG 211 (218)
T ss_dssp TTC
T ss_pred HhC
Confidence 553
No 6
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=100.00 E-value=1.2e-32 Score=228.33 Aligned_cols=148 Identities=26% Similarity=0.456 Sum_probs=120.7
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcch--hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGI--SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 83 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~--~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~ 83 (174)
.+++...++|||||+|||+++++... ..+.+ ...++|+||||+|||+|+.++||++.+... .++|... +...
T Consensus 35 ~~~i~~~~~dgiIlsGGp~s~~~~~~~~~~~~~--~~~~~PvLGIC~G~Qlla~~~GG~v~~~~~-~e~G~~~-v~~~-- 108 (503)
T 2ywb_A 35 LEEVLKHRPQALILSGGPRSVFDPDAPRPDPRL--FSSGLPLLGICYGMQLLAQELGGRVERAGR-AEYGKAL-LTRH-- 108 (503)
T ss_dssp HHHHHTTCCSEEEECCCSSCSSCTTCCCCCGGG--GCSSCCEEEETHHHHHHHHTTTCEEECC----CEEEEE-CSEE--
T ss_pred HHHHHhcCCCEEEECCCCchhccCCCcchHHHH--HhCCCCEEEECHHHHHHHHHhCCeEeeCCC-CccceEE-EEec--
Confidence 46777778899999999999987542 22222 456899999999999999999999998762 3455443 2222
Q ss_pred CCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHH
Q 030626 84 GEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 163 (174)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~ 163 (174)
. +++|+++++.+.++++|++.|.. ++++++++|+++++.++|+++++++ ++|+|||||+..++.|.+||+||++.
T Consensus 109 ~-~~l~~~~~~~~~v~~~H~~~v~~---lp~g~~v~A~s~~~~i~ai~~~~~~-~~gvQFHPE~~~~~~g~~ll~~F~~~ 183 (503)
T 2ywb_A 109 E-GPLFRGLEGEVQVWMSHQDAVTA---PPPGWRVVAETEENPVAAIASPDGR-AYGVQFHPEVAHTPKGMQILENFLEL 183 (503)
T ss_dssp C-SGGGTTCCSCCEEEEECSCEEEE---CCTTCEEEEECSSCSCSEEECTTSS-EEEESBCTTSTTSTTHHHHHHHHHHH
T ss_pred C-cHHhhcCCCccEEEEECCCcccc---CCCCCEEEEEECCCCEEEEEeCCCC-EEEEecCCCcccccccHHHHHHHHHH
Confidence 2 78999998888999999999987 7799999999999999999997765 99999999998888999999999965
Q ss_pred H
Q 030626 164 I 164 (174)
Q Consensus 164 ~ 164 (174)
|
T Consensus 184 ~ 184 (503)
T 2ywb_A 184 A 184 (503)
T ss_dssp T
T ss_pred h
Confidence 4
No 7
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=99.98 E-value=8.7e-32 Score=205.75 Aligned_cols=149 Identities=24% Similarity=0.368 Sum_probs=115.1
Q ss_pred CCCEEEeCCCCC-CC--CCcc-------------h-hHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCC-----c
Q 030626 13 NPRGVLISPGPG-AP--QDSG-------------I-SLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPL-----G 69 (174)
Q Consensus 13 ~~dgiii~GG~~-~~--~~~~-------------~-~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~-----~ 69 (174)
++|||||+||++ ++ +... . .++.+++ +..++|+||||+|||+|+.++||++.+... .
T Consensus 61 ~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGIC~G~Qll~~a~Gg~v~~~~~~~~~~~ 140 (254)
T 3fij_A 61 LVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGTLYQDISQVETKA 140 (254)
T ss_dssp TCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEETHHHHHHHHHTTCCEESSGGGSSSCC
T ss_pred hCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCceecccccccCcc
Confidence 689999999986 22 2111 0 2344444 567899999999999999999999987531 0
Q ss_pred ccc-------cccceeEeccCCCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeC-CCCceEEE
Q 030626 70 VMH-------GKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHK-KYKHLQGV 141 (174)
Q Consensus 70 ~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~-~~~~~~g~ 141 (174)
..| ..+..+... ..+.+++.+++.+.++++|++.+.. ++++++++|+++|+.|+|++.+ ++++++|+
T Consensus 141 ~~h~~~~~~~~g~~~v~~~--~~s~l~~~~~~~~~v~~~H~~~v~~---l~~g~~v~a~s~dg~ieai~~~~~~~~~~gv 215 (254)
T 3fij_A 141 LQHLQRVDEQLGSHTIDIE--PTSELAKHHPNKKLVNSLHHQFIKK---LAPSFKVTARTADGMIEAVEGDNLPSWYLGV 215 (254)
T ss_dssp CCCBCCSCTTSCCEEEEEC--TTSSGGGTCCTTEEECCBCSCEESS---CCSSEEEEEEETTCCEEEEEESSCSSCEEEE
T ss_pred ccccCCCCCccceEEEEeC--CCChHHHhcCCcEEEEEeccchhhc---cCCCcEEEEEeCCCcEEEEEecCCCCeEEEE
Confidence 111 123334333 4577888888888899999999976 6789999999999999999999 87779999
Q ss_pred ecCCCCcCC--CchHHHHHHHHHHHHH
Q 030626 142 QFHPESIIT--TEGKTIVRNFIKMIVR 166 (174)
Q Consensus 142 QfHPE~~~~--~~~~~l~~~f~~~~~~ 166 (174)
|||||+..+ +.+.+||++|++++.+
T Consensus 216 QfHPE~~~~~~~~~~~lf~~Fv~~~~~ 242 (254)
T 3fij_A 216 QWHPELMFQTDPESEQLFQALVDESKK 242 (254)
T ss_dssp SSCGGGTGGGCHHHHHHHHHHHHHHHS
T ss_pred EcCCccCCCCCchHHHHHHHHHHHHHH
Confidence 999999765 4578999999998875
No 8
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=99.98 E-value=1.1e-31 Score=214.26 Aligned_cols=151 Identities=24% Similarity=0.439 Sum_probs=117.5
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKG 84 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~ 84 (174)
.+++...++|||||+|||+++.+....++.+++ +..++|+||||+|||+|+.++||++.+++.+. ++.+.++....
T Consensus 224 ~e~i~~~~~DGliLsGGPgdp~~~~~~~~~Ir~~~~~~~PILGIClG~QLLa~A~GG~v~k~~~gh-~g~n~pv~~~~-- 300 (379)
T 1a9x_B 224 AEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLALASGAKTVKMKFGH-HGGNHPVKDVE-- 300 (379)
T ss_dssp HHHHHTTCCSEEEECCCSBCSTTCHHHHHHHHHHTTSCCCEEEETHHHHHHHHHTTCCEEEEEEEE-EEEEEEEEETT--
T ss_pred HHHHhhcCCCEEEEeCCCCChHHHHHHHHHHHHHHHcCCCEEEECchHHHHHHHhCcEEEeccccc-ccCceeeEecC--
Confidence 356766789999999999999876666677776 56689999999999999999999999986332 34443433211
Q ss_pred CCCcccCCCCceeecccccceecccCCCCCCcEEEEEc-CCCceEEEeeCCCCceEEEecCCCCcCCC-chHHHHHHHHH
Q 030626 85 EDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWT-EDGLIMAARHKKYKHLQGVQFHPESIITT-EGKTIVRNFIK 162 (174)
Q Consensus 85 ~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s-~~~~i~a~~~~~~~~~~g~QfHPE~~~~~-~~~~l~~~f~~ 162 (174)
. ...+.+.++|++.|+.+++ ++++++++++ +|+.++|+++++++ ++|+|||||...++ ++..||++|++
T Consensus 301 ~-------g~v~its~~H~~aV~~~~L-p~~~~v~a~s~~Dg~ieai~~~~~p-i~gVQFHPE~~~~p~d~~~Lf~~Fl~ 371 (379)
T 1a9x_B 301 K-------NVVMITAQNHGFAVDEATL-PANLRVTHKSLFDGTLQGIHRTDKP-AFSFQGNPEASPGPHDAAPLFDHFIE 371 (379)
T ss_dssp T-------TEEEEEEEEEEEEECSTTC-CTTEEEEEEETTTCCEEEEEESSSS-EEEESSCTTCSSSCSTTTHHHHHHHH
T ss_pred C-------CcEEEEecCccceEecccC-CCCeEEEEEeCCCCcEEEEEECCCC-EEEEEeCCcCCCCcccHHHHHHHHHH
Confidence 0 1123456789999986444 5789999998 78999999998766 99999999998776 57899999999
Q ss_pred HHHHHH
Q 030626 163 MIVRKE 168 (174)
Q Consensus 163 ~~~~~~ 168 (174)
.+.+.+
T Consensus 372 ~~~~~~ 377 (379)
T 1a9x_B 372 LIEQYR 377 (379)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 987643
No 9
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.98 E-value=2.4e-32 Score=227.49 Aligned_cols=149 Identities=26% Similarity=0.416 Sum_probs=122.0
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcch--hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGI--SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 83 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~--~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~ 83 (174)
.+++...++|||||+|||+++++... ..+.+ ...++|+||||+|||+|+.++||++.+.. ..++|... +...
T Consensus 43 ~~~i~~~~~dgiILsGGp~s~~~~~~~~~~~~~--~~~g~PvLGIC~G~Qlla~~~GG~V~~~~-~~e~G~~~-v~~~-- 116 (525)
T 1gpm_A 43 EAQIRDFNPSGIILSGGPESTTEENSPRAPQYV--FEAGVPVFGVCYGMQTMAMQLGGHVEASN-EREFGYAQ-VEVV-- 116 (525)
T ss_dssp HHHHHHHCCSEEEECCCSSCTTSTTCCCCCGGG--GTSSSCEEEETHHHHHHHHHHTCEEECCS-SCEEEEEE-EEEC--
T ss_pred HHHHhccCCCEEEECCcCccccccCCcchHHHH--HHCCCCEEEEChHHHHHHHHcCCEEEeCC-CcccceEE-EEeC--
Confidence 46677778999999999999987542 22222 35679999999999999999999999886 33455443 3332
Q ss_pred CCCCcccCCCC--------ceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHH
Q 030626 84 GEDGLLAGLSN--------PFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKT 155 (174)
Q Consensus 84 ~~~~l~~~~~~--------~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~ 155 (174)
..++||++++. .+.++++|++.|.. ++++++++|+++++.++|+++.+++ +||+|||||+..++.|.+
T Consensus 117 ~~~~L~~~l~~~~~~~~~~~~~v~~~H~~~V~~---lp~g~~v~A~s~~~~i~ai~~~~~~-i~gvQFHPE~~~~~~g~~ 192 (525)
T 1gpm_A 117 NDSALVRGIEDALTADGKPLLDVWMSHGDKVTA---IPSDFITVASTESCPFAIMANEEKR-FYGVQFHPEVTHTRQGMR 192 (525)
T ss_dssp SCCTTTTTCCSEECTTSCEEEEEEEEECSEEEE---CCTTCEEEEECSSCSCSEEEETTTT-EEEESBCTTSTTSTTHHH
T ss_pred CCCHhhccCccccccccccceEEEEEccceeee---CCCCCEEEEECCCCCEEEEEECCCC-EEEEecCCCCCcchhHHH
Confidence 35689999987 78899999999986 7799999999999999999997765 999999999988889999
Q ss_pred HHHHHHHHH
Q 030626 156 IVRNFIKMI 164 (174)
Q Consensus 156 l~~~f~~~~ 164 (174)
||+||+..+
T Consensus 193 ll~nF~~~i 201 (525)
T 1gpm_A 193 MLERFVRDI 201 (525)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHhh
Confidence 999999543
No 10
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.98 E-value=8.3e-33 Score=230.28 Aligned_cols=150 Identities=25% Similarity=0.401 Sum_probs=112.7
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCC
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE 85 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~ 85 (174)
+++...++|||||+|||+++++.+.. ....+ ...++|+||||+|||+|+.++||++.+... .++|... +... ..
T Consensus 47 ~~i~~~~~dgIILsGGp~sv~~~~~~-~~~~~~~~~~~PvLGIC~G~Qlla~~lGG~V~~~~~-~e~G~~~-v~~~--~~ 121 (527)
T 3tqi_A 47 ETIRDFNPHGIILSGGPETVTLSHTL-RAPAFIFEIGCPVLGICYGMQTMAYQLGGKVNRTAK-AEFGHAQ-LRVL--NP 121 (527)
T ss_dssp SSSTTTCCSEEEECCCCC----------CCCSTTTSSSCEEEETHHHHHHHHHSSSCBC------CEEEEE-EEES--SC
T ss_pred HHHHhcCCCEEEECCcCcccccCCCh-hhHHHHHhcCCCEEEEChHHHHHHHHcCCeEEeCCC-ccccceE-EEEc--CC
Confidence 34555678999999999998876432 11111 456899999999999999999999998863 3455443 3332 35
Q ss_pred CCcccCCCC--------ceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHH
Q 030626 86 DGLLAGLSN--------PFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIV 157 (174)
Q Consensus 86 ~~l~~~~~~--------~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~ 157 (174)
+++|+++++ .+.++++|++.+.. +|++++++|+++++.++|+++.+++ +||+|||||+..++.|.+||
T Consensus 122 ~~l~~~l~~~~~~~~~~~~~v~~~H~d~v~~---lp~g~~v~A~s~~~~i~ai~~~~~~-~~GvQFHPE~~~t~~G~~ll 197 (527)
T 3tqi_A 122 AFLFDGIEDQVSPQGEPLLDVWMSHGDIVSE---LPPGFEATACTDNSPLAAMADFKRR-FFGLQFHPEVTHTPQGHRIL 197 (527)
T ss_dssp TTTTSSCCSBCCTTSCCEEEEEEESSSCBCS---CCTTCEEEEEETTEEEEEEECSSSC-EEEESBCSSSTTSTTHHHHH
T ss_pred ChhhcCCccccccccccceEEEEEcccchhc---cCCCCEEEEEeCCCcEEEEEcCCCC-EEEEEeccccccccccchhh
Confidence 689999986 58899999999976 7799999999999999999997766 99999999999889999999
Q ss_pred HHHHHHHH
Q 030626 158 RNFIKMIV 165 (174)
Q Consensus 158 ~~f~~~~~ 165 (174)
+||+..++
T Consensus 198 ~nF~~~i~ 205 (527)
T 3tqi_A 198 AHFVIHIC 205 (527)
T ss_dssp HHHHHTTS
T ss_pred hhhhhhcc
Confidence 99996543
No 11
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.97 E-value=5.4e-32 Score=226.35 Aligned_cols=153 Identities=26% Similarity=0.415 Sum_probs=120.7
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCcch--hHHHHHH--cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEecc
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDSGI--SLQTVLE--LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDE 82 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~~~--~~~~i~~--~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~ 82 (174)
+++...++||||||||++++++.+. ....+.+ ...++|+||||+|||+|+.++||++.+.. ..++|.........
T Consensus 44 ~~i~~~~~dgIIlsGGp~s~~~~~~~~~~~~l~~~a~~~g~PvLGIC~G~QlLa~~lGG~V~~~~-~~E~G~~~l~~~~~ 122 (556)
T 3uow_A 44 KDIKDMNIKGVILSGGPYSVTEAGSPHLKKEVFEYFLEKKIPIFGICYGMQEIAVQMNGEVKKSK-TSEYGCTDVNILRN 122 (556)
T ss_dssp GGTTTSCEEEEEECCCSCCTTSTTCCCCCHHHHHHHHHTTCCEEEETHHHHHHHHHTTCEEEEEE-EEEEEEEEEEECCT
T ss_pred HHHhhcCCCEEEECCCCCcccccCCcchhHHHHHHhhhcCCCEEEECHHHHHHHHHhCCcEecCC-CcccCCcceeeccC
Confidence 3455558899999999999987643 2233333 34579999999999999999999998875 33455433222211
Q ss_pred C----------------------------CCCCcccCC-CCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeC
Q 030626 83 K----------------------------GEDGLLAGL-SNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHK 133 (174)
Q Consensus 83 ~----------------------------~~~~l~~~~-~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~ 133 (174)
. ..+++|+++ ++.+.++++|++.+.. ++++++++|+++++.++|++++
T Consensus 123 ~~~~~~p~v~~~~~~~~~mg~~~n~~~~~~~~~Lf~gl~~~~~~v~~~H~d~V~~---lp~g~~vlA~s~~~~i~ai~~~ 199 (556)
T 3uow_A 123 DNINNITYCRNFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTK---IPENFYLVSSSENCLICSIYNK 199 (556)
T ss_dssp TGGGGCSGGGGC---CCHHHHHTTSCCCC--CGGGTTCCSSEEEEEEEEEEEEEE---CCTTCEEEEEETTEEEEEEEET
T ss_pred cccccccceecccccccccccccccccccccchhhcccccCceEEEEEccceeec---cCCCcEEEEEeCCCCEEEEEEC
Confidence 1 134799999 8889999999999977 7799999999999999999997
Q ss_pred CCCceEEEecCCCCcCCCchHHHHHHHHHHH
Q 030626 134 KYKHLQGVQFHPESIITTEGKTIVRNFIKMI 164 (174)
Q Consensus 134 ~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~ 164 (174)
+++ +||+|||||++.++.|.+||+||+..+
T Consensus 200 ~~~-i~GvQFHPE~~~~~~G~~ll~nFl~~i 229 (556)
T 3uow_A 200 EYN-IYGVQYHPEVYESLDGELMFYNFAYNI 229 (556)
T ss_dssp TTT-EEEESSCTTSTTSTTHHHHHHHHHTTT
T ss_pred CCC-EEEEEcCCCCCccccchHHHHHHHHHh
Confidence 765 999999999998889999999999543
No 12
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=99.97 E-value=9.1e-30 Score=192.94 Aligned_cols=140 Identities=17% Similarity=0.225 Sum_probs=111.1
Q ss_pred CCCEEEeCCCCCCCCCcc--h----hHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCC
Q 030626 13 NPRGVLISPGPGAPQDSG--I----SLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE 85 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~--~----~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~ 85 (174)
++|||||+||++++++.. . ..+.+++ ...++|+||||+|||+|+.++||++.+...+...| +..+.. ...
T Consensus 57 ~~Dglil~GG~~~~~~~~~~~~l~~~~~~i~~~~~~~~PiLGIC~G~QlL~~alGG~v~~~~~g~~~G-~~~v~~--~~~ 133 (239)
T 1o1y_A 57 EYSLVVLLGGYMGAYEEEKYPFLKYEFQLIEEILKKEIPFLGICLGSQMLAKVLGASVYRGKNGEEIG-WYFVEK--VSD 133 (239)
T ss_dssp GCSEEEECCCSCCTTCTTTCTHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEECTTCCEEE-EEEEEE--CCC
T ss_pred cCCEEEECCCCccccCCccChhHHHHHHHHHHHHHCCCCEEEEchhHHHHHHHcCCeEecCCCCCccc-cEEEEE--CCC
Confidence 689999999998887653 2 2344444 45679999999999999999999999987434344 334432 246
Q ss_pred CCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHHH
Q 030626 86 DGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIV 165 (174)
Q Consensus 86 ~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~~ 165 (174)
+++|+++++.+.++++|++.+. ++++++++|+++++.+++++.++ ++|+|||||+. ..++++|++...
T Consensus 134 ~~l~~~~~~~~~~~~~H~~~v~----lp~~~~vlA~s~~~~iea~~~~~---i~gvQfHPE~~-----~~~~~~~~~~~~ 201 (239)
T 1o1y_A 134 NKFFREFPDRLRVFQWHGDTFD----LPRRATRVFTSEKYENQGFVYGK---AVGLQFHIEVG-----ARTMKRWIEAYK 201 (239)
T ss_dssp CGGGTTSCSEEEEEEEESEEEC----CCTTCEEEEECSSCSCSEEEETT---EEEESSBSSCC-----HHHHHHHHHHTH
T ss_pred CchHHhCCCCceeEeecCCccc----cCCCCEEEEEcCCCCEEEEEECC---EEEEEeCccCC-----HHHHHHHHHHhH
Confidence 7899999888999999999984 56899999999999999999873 99999999984 458999988755
Q ss_pred HH
Q 030626 166 RK 167 (174)
Q Consensus 166 ~~ 167 (174)
..
T Consensus 202 ~~ 203 (239)
T 1o1y_A 202 DE 203 (239)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 13
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=99.97 E-value=3.2e-30 Score=195.15 Aligned_cols=140 Identities=20% Similarity=0.279 Sum_probs=111.3
Q ss_pred CCCEEEeCCCCCCCCCc---ch------hHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEec-
Q 030626 13 NPRGVLISPGPGAPQDS---GI------SLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD- 81 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~---~~------~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~- 81 (174)
++|+|||+|||+++.+. .. ..+.+++ ...++|+||||+|||+|+.++||++.+.+. ..+|.. .+...
T Consensus 45 ~~d~lii~GGp~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~PvLGIClG~QlL~~~~Gg~v~~~~~-~~~G~~-~v~~~~ 122 (236)
T 3l7n_A 45 DFDMLILMGGPQSPSSTKKEFPYYDAQAEVKLIQKAAKSEKIIVGVCLGAQLMGVAYGADYLHSPK-KEIGNY-LISLTE 122 (236)
T ss_dssp GCSEEEECCCSSCTTCCTTTCTTCCHHHHHHHHHHHHHTTCEEEEETHHHHHHHHHTTCCCEEEEE-EEEEEE-EEEECT
T ss_pred ccCEEEECCCCCCcccccccCcccchHHHHHHHHHHHHcCCCEEEEchHHHHHHHHhCCEEecCCC-ceeeeE-EEEEcc
Confidence 68999999999997432 11 2344554 567899999999999999999999988763 345544 44443
Q ss_pred cCCCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHH
Q 030626 82 EKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFI 161 (174)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~ 161 (174)
...++++|.++++.+.++++|++... ++++++++|+++++.+++++..+ +++|+|||||++ ..++++|+
T Consensus 123 ~~~~~~l~~~~~~~~~v~~~H~~~~~----lp~~~~vla~s~~~~~~a~~~~~--~v~gvQfHPE~~-----~~~~~~~~ 191 (236)
T 3l7n_A 123 AGKMDSYLSDFSDDLLVGHWHGDMPG----LPDKAQVLAISQGCPRQIIKFGP--KQYAFQCHLEFT-----PELVAALI 191 (236)
T ss_dssp TGGGCGGGTTSCSEEEEEEEEEEECC----CCTTCEEEEECSSCSCSEEEEET--TEEEESSBSSCC-----HHHHHHHH
T ss_pred CcccChHHhcCCCCcEEEEecCCccc----CCChheEEEECCCCCEEEEEECC--CEEEEEeCCCCC-----HHHHHHHH
Confidence 22357899999999999999998733 56899999999999999999875 599999999984 77999998
Q ss_pred HHHH
Q 030626 162 KMIV 165 (174)
Q Consensus 162 ~~~~ 165 (174)
+...
T Consensus 192 ~~~~ 195 (236)
T 3l7n_A 192 AQED 195 (236)
T ss_dssp HHCS
T ss_pred Hhhh
Confidence 8765
No 14
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=221.64 Aligned_cols=145 Identities=26% Similarity=0.442 Sum_probs=110.5
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcch--hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGI--SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK 83 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~--~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~ 83 (174)
.+++...++|||||+|||+++++... +.+.+ ...++|+||||+|||+|+.++||++.+... .++|. ..+...
T Consensus 65 ~e~i~~~~~dGIILsGGp~s~~~~~~~~~~~~i--~~~g~PvLGIC~G~QlLa~~lGG~v~~~~~-~e~G~-~~v~~~-- 138 (697)
T 2vxo_A 65 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAI--FTIGKPVLGICYGMQMMNKVFGGTVHKKSV-REDGV-FNISVD-- 138 (697)
T ss_dssp HHHHHHHTCSEEEEEECC-------CCCCCGGG--TTSSCCEEEEEHHHHHHHHHTTCCBCC--------C-EEEEEC--
T ss_pred HHHHhhcCCCEEEECCCCCcccCccchhHHHHH--HhCCCCEEEECHHHHHHHHHhCCeEeecCC-Cccce-EEEEec--
Confidence 45676678999999999999875432 22222 356799999999999999999999998763 34554 344433
Q ss_pred CCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHH
Q 030626 84 GEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFI 161 (174)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~ 161 (174)
..++||+++++.+.++++|++.+.. ++++++++|++++ .++|+++.+++ +||+|||||+..++.|.+||+||+
T Consensus 139 ~~~~Lf~~l~~~~~v~~~H~~~V~~---lp~g~~vlA~s~~-~i~ai~~~~~~-i~GvQFHPE~~~t~~g~~ll~nFl 211 (697)
T 2vxo_A 139 NTCSLFRGLQKEEVVLLTHGDSVDK---VADGFKVVARSGN-IVAGIANESKK-LYGAQFHPEVGLTENGKVILKNFL 211 (697)
T ss_dssp TTSGGGTTCCSEEEECCCSSCCBSS---CCTTCEEEEEETT-EEEEEEETTTT-EEEESSCTTSSSSTTHHHHHHHHH
T ss_pred CCChhhhcCCccCcceeecccceec---CCCCeEEEEEeCC-ceEEEEeCCCC-EEEEEecccCCCCccchhhhhhhh
Confidence 3578999998888999999999976 6789999999965 99999998765 999999999988899999999999
No 15
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=99.96 E-value=5.4e-30 Score=194.98 Aligned_cols=127 Identities=20% Similarity=0.225 Sum_probs=101.2
Q ss_pred CCCEEEeCCCCCCCCCcchh----HHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEecc-CCCC
Q 030626 13 NPRGVLISPGPGAPQDSGIS----LQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDE-KGED 86 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~----~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~-~~~~ 86 (174)
++|+|||+||++++++...+ .+.+++ +..++|+||||+|+|+|+.++||+|.+.+. .++|.. .+.... ...+
T Consensus 48 ~~d~lIl~GGp~~~~d~~~~~~~~~~~i~~~~~~~~PvlGIC~G~Qll~~~lGG~V~~~~~-~e~G~~-~v~~~~~~~~~ 125 (250)
T 3m3p_A 48 DCSGLAMMGGPMSANDDLPWMPTLLALIRDAVAQRVPVIGHCLGGQLLAKAMGGEVTDSPH-AEIGWV-RAWPQHVPQAL 125 (250)
T ss_dssp GSSEEEECCCSSCTTSCCTTHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-EEEEEE-EEEECSSHHHH
T ss_pred cCCEEEECCCCCcccccchHHHHHHHHHHHHHHcCCCEEEECHHHHHHHHHhCCEEEeCCC-CceeeE-EEEEecCCCCc
Confidence 68999999999998765333 233443 456899999999999999999999999863 334443 444332 1235
Q ss_pred CcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCc
Q 030626 87 GLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESI 148 (174)
Q Consensus 87 ~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~ 148 (174)
++| ++++.+.++++|++.+. ++++++++|+++++.++|++..+ +++|+|||||++
T Consensus 126 ~l~-g~~~~~~v~~~H~~~v~----lp~~~~vlA~s~~~~~~a~~~~~--~~~GvQfHPE~~ 180 (250)
T 3m3p_A 126 EWL-GTWDELELFEWHYQTFS----IPPGAVHILRSEHCANQAYVLDD--LHIGFQCHIEMQ 180 (250)
T ss_dssp HHH-SCSSCEEEEEEEEEEEC----CCTTEEEEEEETTEEEEEEEETT--TEEEESSCTTCC
T ss_pred ccc-cCCCccEEEEEccceee----cCCCCEEEEEeCCCCEEEEEECC--eeEEEEeCCcCC
Confidence 788 78889999999999993 67899999999999999999976 499999999984
No 16
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.96 E-value=3.7e-30 Score=217.81 Aligned_cols=146 Identities=22% Similarity=0.355 Sum_probs=117.3
Q ss_pred cCCCEEEeCCCCCCCCCcch-h----HHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccCCC
Q 030626 12 KNPRGVLISPGPGAPQDSGI-S----LQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGE 85 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~-~----~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~ 85 (174)
.++|||||+|||+++++... + .+.++. +..++|+||||+|||+|+.++||++.+... ..+|....+... .
T Consensus 485 ~~~DgIIlsGGPg~p~d~~~p~i~~~~~lI~~a~~~~iPiLGIClG~QlLa~alGG~V~~~~~-~~~G~~~~i~~~---~ 560 (645)
T 3r75_A 485 ARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREV-PNQGIQVEIDLF---G 560 (645)
T ss_dssp GGCSEEEECCCSSCTTCTTSHHHHHHHHHHHHHHHHTCCEEEETHHHHHHHHHTTCCEEEEEE-EEEEEEEEEEET---T
T ss_pred cCCCEEEECCCCCChhhhhhhhHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHhCCEEEcCCC-cccccceEEeee---c
Confidence 46899999999999998763 2 233443 456899999999999999999999998763 235555544433 4
Q ss_pred CCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHHH
Q 030626 86 DGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIV 165 (174)
Q Consensus 86 ~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~~ 165 (174)
++++.+++..+.++++|.+.+.. ++++++++|+++++.|+++++++ ++|+|||||+..++.|.+||+||++.+.
T Consensus 561 ~~l~~~~~~~~~v~~~h~~~~~~---lp~g~~v~A~s~dg~i~Ai~~~~---~~GVQFHPE~~~t~~G~~Ll~nFl~~~~ 634 (645)
T 3r75_A 561 QRERVGFYNTYVAQTVRDEMDVD---GVGTVAISRDPRTGEVHALRGPT---FSSMQFHAESVLTVDGPRILGEAITHAI 634 (645)
T ss_dssp EEEEEEEEEEEEEBCSCSEEEET---TTEEEEEEECTTTCBEEEEEETT---EEEESSBTTSTTCTTHHHHHHHHHHHHT
T ss_pred CcceecCCCcEEEEEehhhcccc---CCCCeEEEEEcCCCcEEEEEcCC---EEEEEeCCeecCCcchHHHHHHHHHHHH
Confidence 56777777778888778766644 67899999999999999999863 7999999999888899999999999886
Q ss_pred HH
Q 030626 166 RK 167 (174)
Q Consensus 166 ~~ 167 (174)
+.
T Consensus 635 ~~ 636 (645)
T 3r75_A 635 RR 636 (645)
T ss_dssp TT
T ss_pred hc
Confidence 43
No 17
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=99.96 E-value=1.2e-29 Score=195.65 Aligned_cols=153 Identities=20% Similarity=0.210 Sum_probs=105.8
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCc--cc--------------c---
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLG--VM--------------H--- 72 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~--~~--------------~--- 72 (174)
++|||||+||+++....+ .++.++. ...++|+||||+|||+|+.++||++...... .+ +
T Consensus 67 ~~dgiil~GG~~~~~~~~-~~~~i~~~~~~~~PilGIC~G~Qll~~a~Gg~v~~~~~~~s~E~~~~~~~~~l~~~~~~~~ 145 (273)
T 2w7t_A 67 GCDGIFVPGGFGNRGVDG-KCAAAQVARMNNIPYFGVXLGMQVAVIELSRNVVGWSDANSEEFNKESTHQVVRIMDCDRN 145 (273)
T ss_dssp TCSEEEECCCCTTTTHHH-HHHHHHHHHHHTCCEEEETHHHHHHHHHHHHHTTCCTTCEETTTCTTCSCEEEECCGGGBC
T ss_pred hCCEEEecCCCCCcCchh-HHHHHHHHHHCCCcEEEECcCHHHHHHHHhCccccccCCchhhcccccCCCceeecccccc
Confidence 689999999998754332 3344443 3467999999999999999999998532110 00 1
Q ss_pred -------cccceeEeccCCCCCcccCCCCceeecc--cccceecccCC--C-CCCcEEEEEcCC----C-ceEEEeeCCC
Q 030626 73 -------GKSSLVYYDEKGEDGLLAGLSNPFTAGR--YHSLVIEKESF--P-SDALEVTAWTED----G-LIMAARHKKY 135 (174)
Q Consensus 73 -------~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~H~~~v~~~~l--~-~~~~~~~a~s~~----~-~i~a~~~~~~ 135 (174)
..|..+... ...+.++..++....+++ +|+|.++++.+ + +++++++|++++ + .+++++.+++
T Consensus 146 ~~~~~~~~g~~~v~~~-~~~s~l~~~~~~~~~v~~~H~Hsy~v~~~~v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~ 224 (273)
T 2w7t_A 146 KMGANMHLGACDVYIV-EKSSIMAKIYSKSNIVVERHRHRYEVNTAYFEDLRKAGLCISAVTDPTFSSRCRVEAVENPSL 224 (273)
T ss_dssp SSCBCCEEEEEEEEEC-CTTSHHHHHTTTCSEEEEEEEECCEECGGGHHHHHHTTCEEEEESCTTCCTTCCEEEEECTTS
T ss_pred ccCCcccccceEEEEe-cCCcHHHHHhCCCceEEeecccccccCHHHHHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCC
Confidence 111222221 113445555554444444 67888865311 3 578999999988 5 8999999988
Q ss_pred CceEEEecCCCCcCCCc-hHHHHHHHHHHHHHH
Q 030626 136 KHLQGVQFHPESIITTE-GKTIVRNFIKMIVRK 167 (174)
Q Consensus 136 ~~~~g~QfHPE~~~~~~-~~~l~~~f~~~~~~~ 167 (174)
|+++|+|||||+..++. +.+||++|++.+.++
T Consensus 225 p~~~GvQfHPE~~~~~~~~~~l~~~Fv~~~~~~ 257 (273)
T 2w7t_A 225 RFFLAVQFHPEFISTPMDPAPTYLSFMAAAAKK 257 (273)
T ss_dssp SSEEEESSCGGGSCBTTBCCHHHHHHHHHHHTC
T ss_pred CeEEEEeCCCCcCCCCCchHHHHHHHHHHHHHH
Confidence 87789999999976654 589999999988764
No 18
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=99.95 E-value=2.5e-29 Score=197.41 Aligned_cols=152 Identities=16% Similarity=0.257 Sum_probs=105.4
Q ss_pred CCCEEEeCCCCCCCCCcc------hhHHHHHHc-C-C-CCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEec-c
Q 030626 13 NPRGVLISPGPGAPQDSG------ISLQTVLEL-G-P-TVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD-E 82 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~------~~~~~i~~~-~-~-~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~-~ 82 (174)
++|||||+||++++.+.. .+++.+++. . . ++||||||+|||+|+.++||++..... ..++...++... .
T Consensus 86 ~~dglil~GG~~~v~p~~~~~~~~~l~~~~~~~~~~g~~~PiLGIC~G~Qll~~a~GG~~~~~~~-~~~g~~~p~~~~~~ 164 (315)
T 1l9x_A 86 SINGILFPGGSVDLRRSDYAKVAKIFYNLSIQSFDDGDYFPVWGTCLGFEELSLLISGECLLTAT-DTVDVAMPLNFTGG 164 (315)
T ss_dssp HSSEEEECCCCCCTTTCHHHHHHHHHHHHHHHHHHTTCCCCEEEETHHHHHHHHHHHSSCCCEEE-EEEEEEECCEECST
T ss_pred cCCEEEEeCCCcccChhhhhHHHHHHHHHHHHHHhcCCCceEEEEChHHHHHHHHhCCccccccc-cccCCCCCeeeccC
Confidence 689999999999876541 233444432 2 2 699999999999999999998654331 123332233222 2
Q ss_pred CCCCCcccCCCCc--------eeecccccceecccC-----CCCCCcEEEEEcCCCceEEE---eeCCCCceEEEecCCC
Q 030626 83 KGEDGLLAGLSNP--------FTAGRYHSLVIEKES-----FPSDALEVTAWTEDGLIMAA---RHKKYKHLQGVQFHPE 146 (174)
Q Consensus 83 ~~~~~l~~~~~~~--------~~~~~~H~~~v~~~~-----l~~~~~~~~a~s~~~~i~a~---~~~~~~~~~g~QfHPE 146 (174)
...+++|+.+++. ..++++|++.|+++. .++++++++|+++|+.++++ ++++++ ++|+|||||
T Consensus 165 ~~~s~L~~~~~~~~~~~l~~~~~~~~~H~~~V~~~~~~~~~~l~~g~~v~A~s~dg~ve~i~~i~~~~~~-i~GVQfHPE 243 (315)
T 1l9x_A 165 QLHSRMFQNFPTELLLSLAVEPLTANFHKWSLSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYP-VYGVQWHPE 243 (315)
T ss_dssp TTTCSTTTTSCHHHHHHHHHSCCEEEEEEEECBHHHHHTCHHHHHHEEEEEEEESSSCEEEEEEEESSSC-EEEESSCTT
T ss_pred CCCChHHHhcChhhhhhccccceEEEhhhhhcCccccccccccCCCCEEEEEcCCCCEEEEEEeccCCCC-EEEEEeCCC
Confidence 2467888888643 123459999997321 14578999999999887666 555555 999999999
Q ss_pred CcCC---C------------chHHHHHHHHHHHHH
Q 030626 147 SIIT---T------------EGKTIVRNFIKMIVR 166 (174)
Q Consensus 147 ~~~~---~------------~~~~l~~~f~~~~~~ 166 (174)
+..+ . ++.+||++|++.+.+
T Consensus 244 ~~~~e~~~~~~~p~s~~a~~~~~~lf~~Fv~~a~~ 278 (315)
T 1l9x_A 244 KAPYEWKNLDGISHAPNAVKTAFYLAEFFVNEARK 278 (315)
T ss_dssp HHHHCCSSCTTCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcccccccccCCccHHHHHHHHHHHHHHHHHHHh
Confidence 8541 1 367999999998764
No 19
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=99.95 E-value=1.4e-28 Score=191.02 Aligned_cols=154 Identities=16% Similarity=0.145 Sum_probs=106.2
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCc------c-----------cccc
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLG------V-----------MHGK 74 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~------~-----------~~~~ 74 (174)
++|||||+||+++... ....+.+++ ...++|+||||+|||+|+.++||++...... . .+..
T Consensus 90 ~~dgiil~GG~~~~~~-~~~~~~i~~~~~~~~PilGIC~G~Q~l~~a~Gg~v~~~~~~~~~e~~~~~~~~~i~~~~~h~~ 168 (289)
T 2v4u_A 90 KADGILVPGGFGIRGT-LGKLQAISWARTKKIPFLGVXLGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNP 168 (289)
T ss_dssp HCSEEEECSCCSSTTH-HHHHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHSCCTTEEESTTCTTCSEEEEEECCBCCT
T ss_pred hCCEEEecCCCCchhH-HHHHHHHHHHHHcCCcEEEECccHHHHHHHHhccccccccCcccccCccccccceecchhhcc
Confidence 5899999999987433 233455554 4568999999999999999999998521100 0 0111
Q ss_pred ----------cceeEeccCCCCCcccCCCCceee--cccccceecccCC--CC-CCcEEEEEcCCCc-eEEEeeCCCCce
Q 030626 75 ----------SSLVYYDEKGEDGLLAGLSNPFTA--GRYHSLVIEKESF--PS-DALEVTAWTEDGL-IMAARHKKYKHL 138 (174)
Q Consensus 75 ----------~~~~~~~~~~~~~l~~~~~~~~~~--~~~H~~~v~~~~l--~~-~~~~~~a~s~~~~-i~a~~~~~~~~~ 138 (174)
+..+... ...+.+++.++....+ +++|+|.|+++.+ ++ ++++++|+++|+. |++++..++|++
T Consensus 169 ~~~~~~~~~g~~~v~~~-~~~s~l~~~~~~~~~v~~~H~H~y~vn~~~v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~ 247 (289)
T 2v4u_A 169 GNLGGTMRLGIRRTVFK-TENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDVDGDRMEIIELANHPYF 247 (289)
T ss_dssp TCSSCBCEEEEEEEEES-CSCCHHHHHTTSCSEEEEEEEECEEECGGGSGGGTTSSEEEEEEETTSCSEEEEEESSSSCE
T ss_pred cccCCccccceEEEEEe-cCCCHHHHhcCCCceEEEecccccccCHHHHHhcccCCeEEEEEcCCCCeEEEEEcCCCCeE
Confidence 1222221 1234455555543334 4456666655322 45 8999999999997 999999988867
Q ss_pred EEEecCCCCcCCC-chHHHHHHHHHHHHHHH
Q 030626 139 QGVQFHPESIITT-EGKTIVRNFIKMIVRKE 168 (174)
Q Consensus 139 ~g~QfHPE~~~~~-~~~~l~~~f~~~~~~~~ 168 (174)
+|+|||||+..++ ++.+||++|++.+.+..
T Consensus 248 lGvQfHPE~~~~~~~~~~lf~~Fv~~~~~~~ 278 (289)
T 2v4u_A 248 VGVQFHPEFSSRPMKPSPPYLGLLLAATGNL 278 (289)
T ss_dssp EEESSBGGGGCBTTBCCHHHHHHHHHHHTCH
T ss_pred EEEECCCCCCCCCCchHHHHHHHHHHHHhhh
Confidence 7999999998765 36899999999887543
No 20
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.95 E-value=1.6e-29 Score=188.18 Aligned_cols=148 Identities=22% Similarity=0.268 Sum_probs=98.4
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcchhHHH---HHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCccc----------
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGISLQT---VLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVM---------- 71 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~~~~~---i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~---------- 71 (174)
.+++. ++|+|||| |+|++.+....++. +.. ...++|+||||+|||+|+.++|+++.+......
T Consensus 35 ~~~l~--~~D~lilP-G~g~~~~~~~~~~~~~~i~~~~~~~~PvlGIClG~QlL~~~~g~~~~~~~~~~~gl~~~~~~v~ 111 (211)
T 4gud_A 35 PQVVL--AADKLFLP-GVGTASEAMKNLTERDLIELVKRVEKPLLGICLGMQLLGKLSEEKGQKADEIVQCLGLVDGEVR 111 (211)
T ss_dssp HHHHH--HCSEEEEC-CCSCHHHHHHHHHHTTCHHHHHHCCSCEEEETHHHHTTSSEECCC----CCCEECCCSSSCEEE
T ss_pred HHHHh--CCCEEEEC-CCCCHHHHHHHHHhcChHHHHHHcCCCEEEEchhHhHHHHHhCCcccccCCccccceeccceEE
Confidence 45665 47999997 45655443332211 222 345799999999999999999988766432110
Q ss_pred ----------ccccceeEeccCCCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEE
Q 030626 72 ----------HGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGV 141 (174)
Q Consensus 72 ----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~ 141 (174)
+..+..+ .....++++++++....++++|++.+. .+..++|+++++...++...+++ +||+
T Consensus 112 ~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~~~~~~H~~~v~------~~~~~~a~~~~g~~~~~~v~~~~-v~Gv 182 (211)
T 4gud_A 112 LLQTGDLPLPHMGWNTV--QVKEGHPLFNGIEPDAYFYFVHSFAMP------VGDYTIAQCEYGQPFSAAIQAGN-YYGV 182 (211)
T ss_dssp ECCCTTSCSSEEEEECC--EECTTCGGGTTCCTTCCEEEEESEECC------CCTTEEEEEESSSEEEEEEEETT-EEEE
T ss_pred EcccCCcceeeccceee--eeeccChhhcCCCCCcEEEEEeeEEeC------CCCeEEEEecCCCeEEEEEeCCC-EEEE
Confidence 0111111 112467899999988999999998874 35567888888876555555545 9999
Q ss_pred ecCCCCcCCCchHHHHHHHHHHHHH
Q 030626 142 QFHPESIITTEGKTIVRNFIKMIVR 166 (174)
Q Consensus 142 QfHPE~~~~~~~~~l~~~f~~~~~~ 166 (174)
|||||+ +++.|.+||+||++.+..
T Consensus 183 QFHPE~-s~~~G~~ll~nFl~~~ge 206 (211)
T 4gud_A 183 QFHPER-SSKAGARLIQNFLELRGE 206 (211)
T ss_dssp SSCGGG-SHHHHHHHHHHHHHC---
T ss_pred EccCEe-cCccHHHHHHHHHHHhcc
Confidence 999998 578899999999987643
No 21
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=99.95 E-value=8.8e-28 Score=178.74 Aligned_cols=145 Identities=14% Similarity=0.214 Sum_probs=107.4
Q ss_pred CCCEEEeCCCCCCCCCc--------chhHHHHHH-cCCCCcEEeehHhHHHHHHH--hCCeeccCCCcccccccceeEec
Q 030626 13 NPRGVLISPGPGAPQDS--------GISLQTVLE-LGPTVPLFGVCMGLQCIGEA--FGGKIVRSPLGVMHGKSSLVYYD 81 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~--------~~~~~~i~~-~~~~~PilGIC~G~Qll~~~--~gg~v~~~~~~~~~~~~~~~~~~ 81 (174)
++|+|||+||.....+. ....+.+++ ...++|+||||+|+|+|+.+ ++|++.+.+....+..+..+...
T Consensus 41 ~~d~lil~Gg~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pilgIC~G~qlLa~aGll~g~v~~~~~~~~~~g~~~v~~~ 120 (213)
T 3d54_D 41 DYELIILPGGFSYGDYLRPGAVAAREKIAFEIAKAAERGKLIMGICNGFQILIEMGLLKGALLQNSSGKFICKWVDLIVE 120 (213)
T ss_dssp SCSEEEECEECGGGGCSSTTHHHHTSTTHHHHHHHHHHTCEEEECHHHHHHHHHHTSSCSEEECCSSSSCBCCEEEEEEC
T ss_pred cCCEEEECCCCchhhhhccccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHcCCCCCCeecCCCCceEeeeEEEEeC
Confidence 68999999997543321 223455554 45679999999999999999 99999887633224555555543
Q ss_pred cCCCCCcccCCCC--ceeecccc---cceecccCCCCCCcEEEEEcCC-----CceEEEeeCCCCceEEEecCCCCcC--
Q 030626 82 EKGEDGLLAGLSN--PFTAGRYH---SLVIEKESFPSDALEVTAWTED-----GLIMAARHKKYKHLQGVQFHPESII-- 149 (174)
Q Consensus 82 ~~~~~~l~~~~~~--~~~~~~~H---~~~v~~~~l~~~~~~~~a~s~~-----~~i~a~~~~~~~~~~g~QfHPE~~~-- 149 (174)
. ..+++++.+++ .+.++.+| ++.+. +++++++|++++ +.|+|++..++ +++|+|||||++.
T Consensus 121 ~-~~~~l~~~~~~~~~~~~~~~H~~~s~~~~-----~~~~~~~a~~~~~ng~~~~i~a~~~~~~-~~~gvQfHPE~~~~~ 193 (213)
T 3d54_D 121 N-NDTPFTNAFEKGEKIRIPIAHGFGRYVKI-----DDVNVVLRYVKDVNGSDERIAGVLNESG-NVFGLMPHPERAVEE 193 (213)
T ss_dssp C-CSSTTSTTSCTTCEEEEECCBSSCEEECS-----SCCEEEEEESSCSSCCGGGEEEEECSSS-CEEEECSCSTTTTST
T ss_pred C-CCCceeeccCCCCEEEEEeecCceEEEec-----CCCcEEEEEcCCCCCCccceeEEEcCCC-CEEEEeCCHHHhcCH
Confidence 2 46789988875 45566688 45553 368899999876 48999998654 4999999999976
Q ss_pred ---CCchHHHHHHHHHHH
Q 030626 150 ---TTEGKTIVRNFIKMI 164 (174)
Q Consensus 150 ---~~~~~~l~~~f~~~~ 164 (174)
++.+.+||+||++.+
T Consensus 194 ~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 194 LIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp TTTCSTTSHHHHHHHHHC
T ss_pred hhhcCccHHHHHHHHHHh
Confidence 467899999999875
No 22
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=99.95 E-value=2.4e-28 Score=178.47 Aligned_cols=137 Identities=18% Similarity=0.282 Sum_probs=98.3
Q ss_pred CCCEEEeCCCCCCCCCcch----hHHHHHHcCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC-----
Q 030626 13 NPRGVLISPGPGAPQDSGI----SLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK----- 83 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~----~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~----- 83 (174)
++|||||+||++++++... +.+.++ ..++|+||||+|||+|+.++||++.... ...+.... ....
T Consensus 37 ~~dglil~GG~~~~~~~~~~~~~~~~~i~--~~~~PilGIC~G~Qll~~~~gg~~~~lg--~~~~~~~~--~~~~~~~~~ 110 (186)
T 2ywj_A 37 GIDALIIPGGESTAIGKLMKKYGLLEKIK--NSNLPILGTCAGMVLLSKGTGINQILLE--LMDITVKR--NAYGRQVDS 110 (186)
T ss_dssp TCSEEEECCSCHHHHHHHHHHTTHHHHHH--TCCCCEEEETHHHHHHSSCCSSCCCCCC--CSSEEEET--TTTCSSSCC
T ss_pred cCCEEEECCCCchhhhhhhhccCHHHHHH--hcCCcEEEECHHHHHHHHHhCCCcCccC--CCceeEEe--ccCCCcccc
Confidence 5899999999886653211 233343 6789999999999999999999853221 11111000 0000
Q ss_pred -CCCCcccCCCCceeecccccceecccCCC-CCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHH
Q 030626 84 -GEDGLLAGLSNPFTAGRYHSLVIEKESFP-SDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFI 161 (174)
Q Consensus 84 -~~~~l~~~~~~~~~~~~~H~~~v~~~~l~-~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~ 161 (174)
..+.++.++ +.+.++++|++.+.. + +++++++|++ |+.++|++.+ +++|+|||||++. ++.+||++|+
T Consensus 111 ~~~~~~~~~~-~~~~~~~~H~~~v~~---l~~~~~~v~a~s-d~~~~a~~~~---~~~gvQfHPE~~~--~g~~l~~~F~ 180 (186)
T 2ywj_A 111 FEKEIEFKDL-GKVYGVFIRAPVVDK---ILSDDVEVIARD-GDKIVGVKQG---KYMALSFHPELSE--DGYKVYKYFV 180 (186)
T ss_dssp EEEEEEETTT-EEEEEEESSCCEEEE---ECCTTCEEEEEE-TTEEEEEEET---TEEEESSCGGGST--THHHHHHHHH
T ss_pred eecccccccC-CcEEEEEEecceeee---cCCCCeEEEEEE-CCEEEEEeeC---CEEEEECCCCcCC--chhHHHHHHH
Confidence 012355555 567889999999975 5 7899999999 7889999864 5999999999753 5899999999
Q ss_pred HHHH
Q 030626 162 KMIV 165 (174)
Q Consensus 162 ~~~~ 165 (174)
+.+.
T Consensus 181 ~~~~ 184 (186)
T 2ywj_A 181 ENCV 184 (186)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9864
No 23
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=99.94 E-value=1.5e-27 Score=197.54 Aligned_cols=158 Identities=19% Similarity=0.248 Sum_probs=109.0
Q ss_pred cCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcc--cc--cccceeEecc----
Q 030626 12 KNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGV--MH--GKSSLVYYDE---- 82 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~--~~--~~~~~~~~~~---- 82 (174)
.++|||||+||+|++...+ .++.++. +..++|+||||+|||+|+.++||++..++... +. +...++....
T Consensus 342 ~~~DGIilsGGpg~~~~~g-~~~~i~~a~~~~~PiLGIClG~Qll~va~Gg~v~~l~~a~s~E~~~~~~hpvi~l~~~w~ 420 (545)
T 1s1m_A 342 KGLDAILVPGGFGYRGVEG-MITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWR 420 (545)
T ss_dssp TTCSEEEECCCCSSTTHHH-HHHHHHHHHHTTCCEEEETHHHHHHHHHHHHHHHCCTTCEETTTCSSCSCEEEECTTTCC
T ss_pred hcCCEEEECCCCCCccchh-hHHHHHHHHHCCCcEEEECChHHHHHHHhCCceecCCCCcccccCCCCCCceEEeecccc
Confidence 3699999999999876433 3344443 45679999999999999999999998654221 11 1111111100
Q ss_pred ---------------------------CCCCCcccCCCCc--eeecccccceeccc---CCCCCCcEEEEEcCCC-ceEE
Q 030626 83 ---------------------------KGEDGLLAGLSNP--FTAGRYHSLVIEKE---SFPSDALEVTAWTEDG-LIMA 129 (174)
Q Consensus 83 ---------------------------~~~~~l~~~~~~~--~~~~~~H~~~v~~~---~l~~~~~~~~a~s~~~-~i~a 129 (174)
..+++++..+... ....+.|.|.|+.. .+.+.+++++|++.|+ .+++
T Consensus 421 ~~~g~~~~q~~~~~~ggtmrlG~~~v~l~~~s~l~~iyg~~~v~e~h~Hry~VNs~~~~~l~~~gl~v~a~s~dg~~VEa 500 (545)
T 1s1m_A 421 DENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEI 500 (545)
T ss_dssp CTTSCCC----------CCEEEEEEEEECTTCHHHHHTTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECSSSCCEEE
T ss_pred cccccccccccccccCccccccceeeEeccCCHHHHhcCCceEEEecCcceEEChHHhhhcccCCeEEEEECCCCCceEE
Confidence 0122223222222 23456777877542 2224799999999998 7999
Q ss_pred EeeCCCCceEEEecCCCCcCCCc-hHHHHHHHHHHHHHHHHh
Q 030626 130 ARHKKYKHLQGVQFHPESIITTE-GKTIVRNFIKMIVRKEAA 170 (174)
Q Consensus 130 ~~~~~~~~~~g~QfHPE~~~~~~-~~~l~~~f~~~~~~~~~~ 170 (174)
+++.++|+++|+|||||+.+++. +.+||++|++++.+.+..
T Consensus 501 ie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~~~ 542 (545)
T 1s1m_A 501 IEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKR 542 (545)
T ss_dssp EECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHhh
Confidence 99999886669999999988874 899999999998876543
No 24
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=99.94 E-value=2e-27 Score=197.03 Aligned_cols=155 Identities=19% Similarity=0.207 Sum_probs=105.5
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCc--ccc--cccceeEe-cc----
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLG--VMH--GKSSLVYY-DE---- 82 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~--~~~--~~~~~~~~-~~---- 82 (174)
++|||||+||+|++...+. ++.++. +..++|+||||+|||+|+.++||++..+... .+. +...++.. ..
T Consensus 355 ~~DGIILpGGfGd~~~~g~-i~~ir~a~e~~iPiLGICLGmQlL~~a~Gg~v~~l~~~~s~E~~~~~~hpvi~~~~~q~~ 433 (550)
T 1vco_A 355 DVSGILVPGGFGVRGIEGK-VRAAQYARERKIPYLGICLGLQIAVIEFARNVAGLKGANSTEFDPHTPHPVIDLMPEQLE 433 (550)
T ss_dssp TCSCEEECCCCSSTTHHHH-HHHHHHHHHTTCCEEEETHHHHHHHHHHHHHTSCCTTCEETTTCTTCSCEEEEESCGGGC
T ss_pred cCCEEEECCCCCCcchhhh-HHHHHHHHHCCCcEEEECcCHHHHHHHhCcccccCCccccccccCCCCCCeEEecccccc
Confidence 6899999999998865433 344443 4578999999999999999999988765421 011 11111110 00
Q ss_pred ----------------CCCCCcccCCCC--ceeecccccceeccc---CCCCCCcEEEEEcCCC------ceEEEeeCCC
Q 030626 83 ----------------KGEDGLLAGLSN--PFTAGRYHSLVIEKE---SFPSDALEVTAWTEDG------LIMAARHKKY 135 (174)
Q Consensus 83 ----------------~~~~~l~~~~~~--~~~~~~~H~~~v~~~---~l~~~~~~~~a~s~~~------~i~a~~~~~~ 135 (174)
..+++++..+.. .....+.|.|.|+.. .+...+++++|++.++ .+++++++++
T Consensus 434 i~~~ggtmrlG~~~v~i~~~s~l~~iy~~~~v~e~h~H~Y~Vns~~~~~l~~~gl~v~a~s~dG~g~~~~~VeaIe~~~~ 513 (550)
T 1vco_A 434 VEGLGGTMRLGDWPMRIKPGTLLHRLYGKEEVLERHRHRYEVNPLYVDGLERAGLVVSATTPGMRGRGAGLVEAIELKDH 513 (550)
T ss_dssp C---CCCCEEEEEEEEECTTSHHHHHHCCSEEEEEEEESEEECHHHHHHHHHHTEEEEEECCCBTTBSTTCEEEEEETTS
T ss_pred ccccCCcccccceEEEEccCchhhHhcCCceeeeeccceEEEchHHhhccccCCeEEEEEeCCCCccCCCcEEEEEeCCC
Confidence 012233332221 122466788887542 2223689999999884 7999999988
Q ss_pred CceEEEecCCCCcCCCc-hHHHHHHHHHHHHHHH
Q 030626 136 KHLQGVQFHPESIITTE-GKTIVRNFIKMIVRKE 168 (174)
Q Consensus 136 ~~~~g~QfHPE~~~~~~-~~~l~~~f~~~~~~~~ 168 (174)
|.++|+|||||+.+++. +.+||++|++++.+.+
T Consensus 514 p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~~~~ 547 (550)
T 1vco_A 514 PFFLGLQSHPEFKSRPMRPSPPFVGFVEAALAYQ 547 (550)
T ss_dssp SSEEEESSCGGGGCBTTBCCHHHHHHHHHHHHHT
T ss_pred CEEEEEEeCCccCCCCCChHHHHHHHHHHHHhhc
Confidence 84459999999987774 8999999999987643
No 25
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=99.94 E-value=4e-27 Score=192.66 Aligned_cols=152 Identities=19% Similarity=0.291 Sum_probs=104.0
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCC--ccccc--ccceeEe-------
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPL--GVMHG--KSSLVYY------- 80 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~--~~~~~--~~~~~~~------- 80 (174)
++||||++||+++....+ .++.++. +.+++|+||||+|||+|+.++||++..... ..+.. ...++..
T Consensus 350 ~~DgIIlpGG~G~~~~~g-~i~~ir~a~~~~~PiLGIClG~Qll~va~Gg~v~g~qda~s~Ef~~~~~~pvI~~m~eq~~ 428 (535)
T 3nva_A 350 NVNGIIVLPGFGSRGAEG-KIKAIKYAREHNIPFLGICFGFQLSIVEFARDVLGLSEANSTEINPNTKDPVITLLDEQKN 428 (535)
T ss_dssp SCSEEEECCCCSSTTHHH-HHHHHHHHHHHTCCEEEETHHHHHHHHHHHHTTTCCTTCEETTTCTTCSCEEEECBCSSSC
T ss_pred CCCEEEECCCCCCccHHH-HHHHHHHHHHcCCcEEEECcchhHHHHHhhccccCccCCcccccCCCCCCCeeecchhccc
Confidence 689999999998864333 3344543 567899999999999999999999954331 11110 0011100
Q ss_pred --------------ccCCCCCcccCC-C-Cceeecccccceecc---cCCCCCCcEEEEEcCCCceEEEeeCCCCceEEE
Q 030626 81 --------------DEKGEDGLLAGL-S-NPFTAGRYHSLVIEK---ESFPSDALEVTAWTEDGLIMAARHKKYKHLQGV 141 (174)
Q Consensus 81 --------------~~~~~~~l~~~~-~-~~~~~~~~H~~~v~~---~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~ 141 (174)
....+.+++..+ . +.+...+.|+|.|++ +.+.+.+++++|+++|+.|+|++++++|+++|+
T Consensus 429 ~~~~ggtmrlg~h~v~l~~gS~L~~iyG~~~I~erHrHryeVNs~h~q~l~~~GL~vsA~s~DG~IEAIE~~~~pf~vGV 508 (535)
T 3nva_A 429 VTQLGGTMRLGAQKIILKEGTIAYQLYGKKVVYERHRHRYEVNPKYVDILEDAGLVVSGISENGLVEIIELPSNKFFVAT 508 (535)
T ss_dssp BCSSCCCCEEEEEEEEECTTSHHHHHHTSSEEEEEEEECCEECHHHHHHHHHTTCEEEEECTTCCEEEEECTTSSCEEEE
T ss_pred ccccCCccccCceEEEEcCCCcHHHHhCCCeeeecccccceechHHHhhcccCCeEEEEEeCCCCEEEEEeCCCCcEEEE
Confidence 000122222221 2 234445667777753 123357999999999999999999999888999
Q ss_pred ecCCCCcCCC-chHHHHHHHHHHHH
Q 030626 142 QFHPESIITT-EGKTIVRNFIKMIV 165 (174)
Q Consensus 142 QfHPE~~~~~-~~~~l~~~f~~~~~ 165 (174)
|||||+.+++ .+.+||++|++++.
T Consensus 509 QfHPE~~~~p~~~~~LF~~Fv~Aa~ 533 (535)
T 3nva_A 509 QAHPEFKSRPTNPSPIYLGFIRAVA 533 (535)
T ss_dssp SSCGGGGCCSSSCCHHHHHHHHHHT
T ss_pred EeCCEecCCCCChhHHHHHHHHHHH
Confidence 9999998776 48899999999874
No 26
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=99.92 E-value=6.1e-27 Score=172.96 Aligned_cols=143 Identities=19% Similarity=0.183 Sum_probs=94.2
Q ss_pred cCCCEEEeCCCCCCCCCcch------hHHHHHH-cCCCCcEEeehHhHHHHHHHhC--CeeccCCCcccccccceeE---
Q 030626 12 KNPRGVLISPGPGAPQDSGI------SLQTVLE-LGPTVPLFGVCMGLQCIGEAFG--GKIVRSPLGVMHGKSSLVY--- 79 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~------~~~~i~~-~~~~~PilGIC~G~Qll~~~~g--g~v~~~~~~~~~~~~~~~~--- 79 (174)
.++|+|||+|| +++.+... ..+.+++ ...++|+||||+|||+|+.++| |+ .+.. +...+......
T Consensus 41 ~~~dglilpG~-g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~g~~G~-~~~l-~~~~g~v~~~~~~~ 117 (201)
T 1gpw_B 41 DLYDLLFIPGV-GHFGEGMRRLRENDLIDFVRKHVEDERYVVGVCLGMQLLFEESEEAPG-VKGL-SLIEGNVVKLRSRR 117 (201)
T ss_dssp SCCSEEEECCC-SCSHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHTTSSEETTEEE-EECC-CSSSEEEEECCCSS
T ss_pred cCCCEEEECCC-CcHHHHHHHHHhhCHHHHHHHHHHcCCeEEEEChhHHHHHHhhccCCC-CCCc-ceeeeEEEEcCCCC
Confidence 46899999764 55432211 2344554 4678999999999999999997 33 1111 00011100000
Q ss_pred eccCCCCCcccCCC-CceeecccccceecccCCCCCCcEEEEEcCC-C-ceEEEeeCCCCceEEEecCCCCcCCCchHHH
Q 030626 80 YDEKGEDGLLAGLS-NPFTAGRYHSLVIEKESFPSDALEVTAWTED-G-LIMAARHKKYKHLQGVQFHPESIITTEGKTI 156 (174)
Q Consensus 80 ~~~~~~~~l~~~~~-~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~-~-~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l 156 (174)
......++++...+ +.+.++++|++.+.+ + +++++|++++ + .+++++.++ +++|+|||||++ ++.+.++
T Consensus 118 ~~~~g~~~l~~~~~~~~~~v~~~H~~~v~~---~--~~~vla~s~~~g~~~~a~~~~~--~i~gvQfHPE~~-~~~~~~l 189 (201)
T 1gpw_B 118 LPHMGWNEVIFKDTFPNGYYYFVHTYRAVC---E--EEHVLGTTEYDGEIFPSAVRKG--RILGFQFHPEKS-SKIGRKL 189 (201)
T ss_dssp CSEEEEEEEEESSSSCCEEEEEEESEEEEE---C--GGGEEEEEEETTEEEEEEEEET--TEEEESSCGGGS-HHHHHHH
T ss_pred CCcccceeeEeccCCCCCeEEEECcceecc---C--CCEEEEEEccCCceEEEEEECC--CEEEEECCCccc-CHhHHHH
Confidence 00000023333333 467899999999975 3 7899999876 5 799999875 499999999996 6678899
Q ss_pred HHHHHHHHH
Q 030626 157 VRNFIKMIV 165 (174)
Q Consensus 157 ~~~f~~~~~ 165 (174)
|++|++.+.
T Consensus 190 ~~~f~~~~~ 198 (201)
T 1gpw_B 190 LEKVIECSL 198 (201)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHHhh
Confidence 999998764
No 27
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=99.92 E-value=2.4e-25 Score=163.82 Aligned_cols=141 Identities=22% Similarity=0.363 Sum_probs=95.7
Q ss_pred CCCEEEeCCCCCCCCCc----chhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC----
Q 030626 13 NPRGVLISPGPGAPQDS----GISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK---- 83 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~----~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~---- 83 (174)
++|+|||+||+.+.++. ..+.+.+++ ...++|+||||+|+|+|+.++|+++.+.. +...+.... ....
T Consensus 38 ~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~pilgIC~G~q~l~~~~gg~~~~~l-g~~~~~~~~--~~~g~~~~ 114 (196)
T 2nv0_A 38 EVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHL-GLLNVVVER--NSFGRQVD 114 (196)
T ss_dssp GCSEEEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHSBCCC----CCC-CCSCEEEEC--CCSCTTTS
T ss_pred hCCEEEECCCChhhHHHHhhhHHHHHHHHHHHHCCCcEEEECHHHHHHHHHhcCCCCCcc-cCCceeEec--cCCCcccc
Confidence 58999999998765432 122455554 46789999999999999999999764322 111110000 0000
Q ss_pred --CCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHH
Q 030626 84 --GEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFI 161 (174)
Q Consensus 84 --~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~ 161 (174)
..+..+.+++.++.++++|++.+.. ++++++++|++ ++.+++++.. +++|+|||||++.. ..++++|+
T Consensus 115 ~~~~~~~~~~~g~~~~~~~~h~~~v~~---~~~~~~v~a~~-d~~~~a~~~~---~~~gvQfHPE~~~~---~~l~~~fl 184 (196)
T 2nv0_A 115 SFEADLTIKGLDEPFTGVFIRAPHILE---AGENVEVLSEH-NGRIVAAKQG---QFLGCSFHPELTED---HRVTQLFV 184 (196)
T ss_dssp EEEEEECCTTCSSCEEEEEESCCEEEE---ECTTCEEEEEE-TTEEEEEEET---TEEEESSCTTSSSC---CHHHHHHH
T ss_pred cccCCcccccCCCceEEEEEecceecc---cCCCcEEEEEE-CCEEEEEEEC---CEEEEEECCccCCc---hHHHHHHH
Confidence 0123445566678888999998865 56889999998 6778999874 59999999998532 58999999
Q ss_pred HHHHH
Q 030626 162 KMIVR 166 (174)
Q Consensus 162 ~~~~~ 166 (174)
+.+.+
T Consensus 185 ~~~~~ 189 (196)
T 2nv0_A 185 EMVEE 189 (196)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98865
No 28
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=99.92 E-value=7.7e-26 Score=169.27 Aligned_cols=146 Identities=19% Similarity=0.313 Sum_probs=99.2
Q ss_pred CCCEEEeCCCCCCCCCc----chhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEe--ccC--
Q 030626 13 NPRGVLISPGPGAPQDS----GISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYY--DEK-- 83 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~----~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~--~~~-- 83 (174)
++|+|||+||+++..+. ....+.+++ ...++||||||+|+|+|+.++|+++.+.. +...+....... ...
T Consensus 60 ~~Dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~PilGIC~G~QlL~~~~gg~~~~~l-g~~~~~~~~~~~g~~~~~~ 138 (219)
T 1q7r_A 60 GLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEPHL-GLMDITVERNSFGRQRESF 138 (219)
T ss_dssp TCSEEEECCCCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETTHHHHHEEEEESSCCCCC-CCEEEEEECHHHHCCCCCE
T ss_pred hCCEEEECCCChHHHHHHhhhhHHHHHHHHHHHcCCeEEEECHHHHHHHHHhCCCCcCCc-CccceEEEecCCCccccce
Confidence 68999999998755431 112345554 46789999999999999999999874322 110000000000 000
Q ss_pred CCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHH
Q 030626 84 GEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKM 163 (174)
Q Consensus 84 ~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~ 163 (174)
..+..+.+++..+.++++|++.+.. ++++++++|++ |+.+++++.. +++|+|||||+... ..++++|++.
T Consensus 139 ~~~~~~~g~g~~~~~~~~h~~~v~~---l~~~~~v~a~s-dg~~ea~~~~---~i~GvQfHPE~~~~---~~l~~~fl~~ 208 (219)
T 1q7r_A 139 EAELSIKGVGDGFVGVFIRAPHIVE---AGDGVDVLATY-NDRIVAARQG---QFLGCSFHPELTDD---HRLMQYFLNM 208 (219)
T ss_dssp EEEEEETTTEEEEEEEESSCCEEEE---ECTTCEEEEEE-TTEEEEEEET---TEEEESSCGGGSSC---CHHHHHHHHH
T ss_pred ecCcccCCCCCceEEEEEecceeec---cCCCcEEEEEc-CCEEEEEEEC---CEEEEEECcccCCC---HHHHHHHHHH
Confidence 0012234454567788899998875 56899999998 7889999874 59999999998532 5899999999
Q ss_pred HHHHHH
Q 030626 164 IVRKEA 169 (174)
Q Consensus 164 ~~~~~~ 169 (174)
+.+.+.
T Consensus 209 ~~~~~~ 214 (219)
T 1q7r_A 209 VKEAKM 214 (219)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 876543
No 29
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.91 E-value=7.1e-25 Score=160.51 Aligned_cols=137 Identities=20% Similarity=0.306 Sum_probs=91.4
Q ss_pred CCCEEEeCCCCCCCCCc----chhHHHHHH-cCCC-CcEEeehHhHHHHHHHhCC-eeccCCCccccccc-------cee
Q 030626 13 NPRGVLISPGPGAPQDS----GISLQTVLE-LGPT-VPLFGVCMGLQCIGEAFGG-KIVRSPLGVMHGKS-------SLV 78 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~----~~~~~~i~~-~~~~-~PilGIC~G~Qll~~~~gg-~v~~~~~~~~~~~~-------~~~ 78 (174)
++|||||+||+....+. ..+.+.+++ ...+ +|+||||+|||+|+.++|+ ++.+.. +...+.. ...
T Consensus 39 ~~dglil~GG~~~~~~~~~~~~~~~~~i~~~~~~~~~PilGiC~G~Q~l~~~~gg~~~~~~l-g~~~~~~~~~~~g~~~~ 117 (191)
T 2ywd_A 39 GLKALIVPGGESTTIGKLAREYGIEDEVRKRVEEGSLALFGTCAGAIWLAKEIVGYPEQPRL-GVLEAWVERNAFGRQVE 117 (191)
T ss_dssp TCSEEEECSSCHHHHHHHHHHTTHHHHHHHHHHTTCCEEEEETHHHHHHEEEETTCTTCCCC-CCEEEEEETTCSCCSSS
T ss_pred cCCEEEECCCChhhhHHhhhhhhHHHHHHHHHHCCCCeEEEECHHHHHHHHHhCCCCCCccc-cccceEEEcCCcCCccc
Confidence 58999999995332111 123445554 4567 9999999999999999998 543221 1100000 000
Q ss_pred EeccCCCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHH
Q 030626 79 YYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVR 158 (174)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~ 158 (174)
.+. .+..+.++ ..+.++++|++.+.. ++++++++|++ ++.+++++.+ +++|+|||||++. ++ .+++
T Consensus 118 ~~~---~~~~~~~~-~~~~~~~~Hs~~v~~---l~~~~~~~a~~-~~~~~a~~~~---~~~gvQfHPE~~~--~~-~l~~ 183 (191)
T 2ywd_A 118 SFE---EDLEVEGL-GSFHGVFIRAPVFRR---LGEGVEVLARL-GDLPVLVRQG---KVLASSFHPELTE--DP-RLHR 183 (191)
T ss_dssp EEE---EEEEETTT-EEEEEEEESCCEEEE---ECTTCEEEEEE-TTEEEEEEET---TEEEESSCGGGSS--CC-HHHH
T ss_pred ccc---ccccccCC-CceeEEEEcccceec---cCCCcEEEEEE-CCEEEEEEEC---CEEEEEeCCCCCC--Cc-HHHH
Confidence 000 01223334 456778899998865 56789999999 5889999975 3999999999753 33 9999
Q ss_pred HHHHHH
Q 030626 159 NFIKMI 164 (174)
Q Consensus 159 ~f~~~~ 164 (174)
+|++.+
T Consensus 184 ~f~~~~ 189 (191)
T 2ywd_A 184 YFLELA 189 (191)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999876
No 30
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=99.91 E-value=3.1e-25 Score=163.76 Aligned_cols=136 Identities=20% Similarity=0.235 Sum_probs=91.6
Q ss_pred CCCEEEeCCCCCCCCCc------chhHHHHHH-cCCCCcEEeehHhHHHHHHH---hC---------CeeccCCC-cccc
Q 030626 13 NPRGVLISPGPGAPQDS------GISLQTVLE-LGPTVPLFGVCMGLQCIGEA---FG---------GKIVRSPL-GVMH 72 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~------~~~~~~i~~-~~~~~PilGIC~G~Qll~~~---~g---------g~v~~~~~-~~~~ 72 (174)
++|+|||+| ++++.+. ....+.+++ ...++|+||||+|+|+|+.+ +| +++.+... ...+
T Consensus 40 ~~d~lil~G-~g~~~~~~~~l~~~~~~~~i~~~~~~~~PilGIC~G~Qll~~~~~~~Gg~~~l~~~~g~v~~~~~~~~~~ 118 (200)
T 1ka9_H 40 EADLLVLPG-QGHFGQVMRAFQESGFVERVRRHLERGLPFLGICVGMQVLYEGSEEAPGVRGLGLVPGEVRRFRAGRVPQ 118 (200)
T ss_dssp SCSEEEECC-CSCHHHHHHTTSSSCTHHHHHHHHHTTCCEEECTHHHHTTSSEETTSTTCCCCCSSSSEEEECCSSSSSE
T ss_pred cCCEEEECC-CCcHHHHHHHHHhcCHHHHHHHHHHcCCeEEEEcHHHHHHHHhccccCCcCCccccccEEEECCCCCCCc
Confidence 689999966 4543221 223455554 46789999999999999999 67 66655531 1112
Q ss_pred cccceeEeccCCCCCcccCCCCceeecccccceecccCCCCCCcEEEEEcCC-C-ceEEEeeCCCCceEEEecCCCCcCC
Q 030626 73 GKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKESFPSDALEVTAWTED-G-LIMAARHKKYKHLQGVQFHPESIIT 150 (174)
Q Consensus 73 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~-~-~i~a~~~~~~~~~~g~QfHPE~~~~ 150 (174)
..|..+... + + |.++++ ..++++|++.+ + .+++ .+ |++++ + .++++...+ +++|+|||||+..
T Consensus 119 ~G~~~v~~~---~-~-l~~~~~-~~~~~~Hs~~~-~---~~~~-~v-a~s~~~g~~~~~~~~~~--~i~gvQfHPE~~~- 183 (200)
T 1ka9_H 119 MGWNALEFG---G-A-FAPLTG-RHFYFANSYYG-P---LTPY-SL-GKGEYEGTPFTALLAKE--NLLAPQFHPEKSG- 183 (200)
T ss_dssp EEEEECEEC---G-G-GGGGTT-CEEEEEESEEC-C---CCTT-CC-EEEEETTEEEEEEEECS--SEEEESSCTTSSH-
T ss_pred eeEEEEEec---h-h-hhcCCC-CCEEEeccccc-C---CCCC-cE-EEEEeCCeEEEEEEeeC--CEEEEecCCCcCc-
Confidence 223333333 1 3 777766 77889999999 5 3333 56 87776 5 678877765 5999999999964
Q ss_pred CchHHHH---HHHHHHH
Q 030626 151 TEGKTIV---RNFIKMI 164 (174)
Q Consensus 151 ~~~~~l~---~~f~~~~ 164 (174)
+.+.+|| +||++.|
T Consensus 184 ~~g~~l~~~~~~F~~~~ 200 (200)
T 1ka9_H 184 KAGLAFLALARRYFEVL 200 (200)
T ss_dssp HHHHHHHHHHHHHC---
T ss_pred cchhHHHHHHHHHHhhC
Confidence 6788999 9998754
No 31
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=99.90 E-value=1.9e-24 Score=160.44 Aligned_cols=136 Identities=16% Similarity=0.223 Sum_probs=90.9
Q ss_pred CCCEEEeCCCCCCCCCc----chhHHHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEeccC----
Q 030626 13 NPRGVLISPGPGAPQDS----GISLQTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYDEK---- 83 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~----~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~---- 83 (174)
++|+|||+||+.+.++. ..+.+.+++ ...++|+||||+|+|+|+.++|+...+.. |.. +..+...
T Consensus 57 ~~d~iil~GG~~~~~~~~~~~~~~~~~i~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~l-----g~~-~~~v~~~~~g~ 130 (208)
T 2iss_D 57 MVDGLILPGGESTTMIRILKEMDMDEKLVERINNGLPVFATCAGVILLAKRIKNYSQEKL-----GVL-DITVERNAYGR 130 (208)
T ss_dssp GCSEEEECSSCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEETHHHHHHEEEEC---CCCC-----CCE-EEEEETTTTCS
T ss_pred hCCEEEECCCcHHHHHhhhhhhhHHHHHHHHHHCCCeEEEECHHHHHHHHHcCCCCCCCc-----ccc-ceEEEecCCCc
Confidence 68999999985433321 113355554 46789999999999999999998532211 110 0000000
Q ss_pred -----CCCCcccCCC-CceeecccccceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHH
Q 030626 84 -----GEDGLLAGLS-NPFTAGRYHSLVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIV 157 (174)
Q Consensus 84 -----~~~~l~~~~~-~~~~~~~~H~~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~ 157 (174)
..+..+.+++ +++.++++|++.+.. ++++++++|.+ ++.+++++.. +++|+|||||+... ..++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~---~~~~~~v~a~~-d~~~~a~~~~---~i~GvQfHPE~~~~---~~l~ 200 (208)
T 2iss_D 131 QVESFETFVEIPAVGKDPFRAIFIRAPRIVE---TGKNVEILATY-DYDPVLVKEG---NILACTFHPELTDD---LRLH 200 (208)
T ss_dssp GGGCEEEEECCGGGCSSCEEEEESSCCEEEE---ECSSCEEEEEE-TTEEEEEEET---TEEEESSCGGGSSC---CHHH
T ss_pred ccccccCCcccccCCCCceEEEEEeCccccc---CCCCcEEEEEE-CCEEEEEEEC---CEEEEEeCCCcCCc---HHHH
Confidence 0123344554 568888899998875 56789999998 5889999864 49999999998543 3899
Q ss_pred HHHHHHH
Q 030626 158 RNFIKMI 164 (174)
Q Consensus 158 ~~f~~~~ 164 (174)
++|++.+
T Consensus 201 ~~fl~~~ 207 (208)
T 2iss_D 201 RYFLEMV 207 (208)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9999754
No 32
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=99.88 E-value=3.6e-23 Score=155.48 Aligned_cols=150 Identities=16% Similarity=0.172 Sum_probs=97.1
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCc------chhHHHHHH-cCC-CCcEEeehHhHHHHHHHhCCeeccCC--Ccccccccc
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDS------GISLQTVLE-LGP-TVPLFGVCMGLQCIGEAFGGKIVRSP--LGVMHGKSS 76 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~------~~~~~~i~~-~~~-~~PilGIC~G~Qll~~~~gg~v~~~~--~~~~~~~~~ 76 (174)
+++. ++|+|||+||+.+..+. ..+.+.+++ ... ++||||||+|||+|+.++|+++.... .....|..
T Consensus 39 ~~l~--~~dglil~GG~~~~~~~~~~~d~~~~~~~i~~~~~~~g~PilGIC~G~QlL~~~~gg~~~~~~~~~~~~lG~~- 115 (227)
T 2abw_A 39 HDLG--LCDGLVIPGGESTTVRRCCAYENDTLYNALVHFIHVLKKPIWGTCAGCILLSKNVENIKLYSNFGNKFSFGGL- 115 (227)
T ss_dssp HHHH--TCSEEEECCSCHHHHHHHTTHHHHHHHHHHHHHHHTSCCCEEEETHHHHHTEEEEECCCSCCTTGGGSCCCCE-
T ss_pred cccc--cCCEEEECCCcHHHHHHHHHHhHHHHHHHHHHHHHhcCCEEEEECHHHHHHHHHhcCCccccccccccccCce-
Confidence 4453 58999999997544321 123445554 456 89999999999999999999763310 00112221
Q ss_pred eeEeccCC---------CCCcccCC----CCceeecccccceecccCCC-CCCcEEEEEcC-----CCceEEEeeCCCCc
Q 030626 77 LVYYDEKG---------EDGLLAGL----SNPFTAGRYHSLVIEKESFP-SDALEVTAWTE-----DGLIMAARHKKYKH 137 (174)
Q Consensus 77 ~~~~~~~~---------~~~l~~~~----~~~~~~~~~H~~~v~~~~l~-~~~~~~~a~s~-----~~~i~a~~~~~~~~ 137 (174)
++.+.... .+..+.++ +..+..++.|++.+.. . +++++++|+++ ++.+++++.. +
T Consensus 116 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~h~~~v~~---~~~~~~~vla~~~~~~~g~~~~~a~~~~---~ 189 (227)
T 2abw_A 116 DITICRNFYGSQNDSFICSLNIISDSSAFKKDLTAACIRAPYIRE---ILSDEVKVLATFSHESYGPNIIAAVEQN---N 189 (227)
T ss_dssp EEEEECCC----CCEEEEECEECCCCTTCCTTCEEEEESCCEEEE---ECCTTCEEEEEEEETTTEEEEEEEEEET---T
T ss_pred eEEEEecCCCccccccccccccccccccCCCceeEEEEEcceEee---cCCCCcEEEEEcccccCCCCceEEEEEC---C
Confidence 11111000 01112222 2456667788888765 4 68899999986 6778898864 5
Q ss_pred eEEEecCCCCcCCCchHHHHHHHHHHHHHHH
Q 030626 138 LQGVQFHPESIITTEGKTIVRNFIKMIVRKE 168 (174)
Q Consensus 138 ~~g~QfHPE~~~~~~~~~l~~~f~~~~~~~~ 168 (174)
++|+|||||++.. ..++++|++.+.+..
T Consensus 190 v~gvQfHPE~~~~---~~l~~~Fl~~~~~~~ 217 (227)
T 2abw_A 190 CLGTVFHPELLPH---TAFQQYFYEKVKNYK 217 (227)
T ss_dssp EEEESSCGGGSSC---CHHHHHHHHHHHHHH
T ss_pred EEEEEECCeeCCC---cHHHHHHHHHHHhhh
Confidence 9999999998532 489999999886543
No 33
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=99.87 E-value=4.5e-22 Score=154.46 Aligned_cols=136 Identities=15% Similarity=0.014 Sum_probs=96.7
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcc--hhH----HHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCccccccccee
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSG--ISL----QTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLV 78 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~--~~~----~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~ 78 (174)
++++...++||+||+|||....+.. .++ +.+.. ..+.+|+||||+|+|+++.+++|...........|....
T Consensus 92 f~~~~~~~~DglIITGap~~~~~~ed~~yw~el~~li~~~~~~~~~~lgIC~GaQ~~l~~~~G~~k~~~~~K~~Gv~~~- 170 (301)
T 2vdj_A 92 FRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVQKYPLKEKMFGVFEH- 170 (301)
T ss_dssp HHHHTTSCEEEEEECCCTTTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEEE-
T ss_pred cccccccccCEEEECCCCCcCCCcccCchHHHHHHHHHHHHHcCCcEEEEcHHHHHHHHHhCCCccccCCCCEEEEEEE-
Confidence 4455556799999999998665432 222 22222 357899999999999977777763333322334555433
Q ss_pred EeccCCCCCcccCCCCceeeccccc-----ceecccCCCCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCc
Q 030626 79 YYDEKGEDGLLAGLSNPFTAGRYHS-----LVIEKESFPSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESI 148 (174)
Q Consensus 79 ~~~~~~~~~l~~~~~~~~~~~~~H~-----~~v~~~~l~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~ 148 (174)
... ...++++.++++.+.+.++|+ +.|.. + ++++++|.|+.+.++++..++. +++++|||||+.
T Consensus 171 ~~~-~~~~pL~~g~~~~f~~phsr~~~~~~~~v~~---~-pga~vLA~S~~~~~~~~~~~~~-~~~~vQgHpEyd 239 (301)
T 2vdj_A 171 EVR-EQHVKLLQGFDELFFAVHSRHTEVRESDIRE---V-KELTLLANSEEAGVHLVIGQEG-RQVFALGHSEYS 239 (301)
T ss_dssp EEC-CSSCGGGTTCCSEEEEEEEEEEECCHHHHHT---C-TTEEEEEEETTTEEEEEEEGGG-TEEEECSCTTCC
T ss_pred Eec-CCCCccccCCCCceEeeeEeccCcCHHHccC---C-CCCEEEEeCCCCcceEEEecCC-CEEEEECCCCCC
Confidence 222 357899999999998888754 44543 3 4999999999999999998654 499999999984
No 34
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=99.86 E-value=3.4e-22 Score=155.56 Aligned_cols=136 Identities=16% Similarity=0.044 Sum_probs=94.6
Q ss_pred HHhcCCCEEEeCCCCCCCCCcc--hhH----HHHHH-cCCCCcEEeehHhHHHHHHHhCCeeccCCCcccccccceeEec
Q 030626 9 YCRKNPRGVLISPGPGAPQDSG--ISL----QTVLE-LGPTVPLFGVCMGLQCIGEAFGGKIVRSPLGVMHGKSSLVYYD 81 (174)
Q Consensus 9 ~~~~~~dgiii~GG~~~~~~~~--~~~----~~i~~-~~~~~PilGIC~G~Qll~~~~gg~v~~~~~~~~~~~~~~~~~~ 81 (174)
+...++||+||+|||....+.. .++ +.+.. ....+|+||||+|+|+++.+++|...........|.... ...
T Consensus 107 ~~~~~~DglIITGsP~~~~~~ed~~yw~el~~li~~~~~~~~p~LGIC~GaQ~~l~~~~G~~k~~~~~K~~Gv~~~-~~~ 185 (312)
T 2h2w_A 107 VKDRKFDGFIITGAPVELLPFEEVDYWEELTEIMEWSRHNVYSTMFICWAAQAGLYYFYGIPKYELPQKLSGVYKH-RVA 185 (312)
T ss_dssp TTTCCEEEEEECCCSCTTSCGGGSTTHHHHHHHHHHHHHHEEEEEEETHHHHHHHHHHHCCCCEEEEEEEEEEEEE-EES
T ss_pred ccccCcCEEEECCCCCCCCCCccCchHHHHHHHHHHHHHcCCcEEEECHHHHHHHHHhCCCccccCCCCEEEEEEE-EEc
Confidence 3345799999999998665432 222 22222 357899999999999988777774433332334555443 333
Q ss_pred cCCCCCcccCCCCceeecccccceecccCC-CCCCcEEEEEcCCCceEEEeeCCCCceEEEecCCCCc
Q 030626 82 EKGEDGLLAGLSNPFTAGRYHSLVIEKESF-PSDALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESI 148 (174)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~H~~~v~~~~l-~~~~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~ 148 (174)
. .++++.++++.+.+.++|+..+..+.+ ..++++++|.|+.+.+++++.++. +++++|||||+.
T Consensus 186 ~--~~pL~~g~~~~f~vphsr~~e~~~~~v~~~pga~vLA~S~~~~~q~~~~~~~-~~~~vQgHPEyd 250 (312)
T 2h2w_A 186 K--DSVLFRGHDDFFWAPHSRYTEVKKEDIDKVPELEILAESDEAGVYVVANKSE-RQIFVTGHPEYD 250 (312)
T ss_dssp S--CCGGGTTCCSEEEEEEEEEEECCHHHHTTCC-CEEEEEETTTEEEEEECSSS-SEEEECSCTTCC
T ss_pred C--CCccccCCCCceEeeEEeccccCHHHccCCCCCEEEEcCCCCcceEEEecCC-CEEEEECCCCCC
Confidence 2 788999999999998875544322111 125999999999999999998664 499999999984
No 35
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.85 E-value=5.2e-23 Score=172.23 Aligned_cols=142 Identities=20% Similarity=0.164 Sum_probs=96.7
Q ss_pred CCCEEEeCCCCCCCCCcc------hhHHHHHH-cCCCCcEEeehHhHHHHHHHh------------CCeeccCCC---cc
Q 030626 13 NPRGVLISPGPGAPQDSG------ISLQTVLE-LGPTVPLFGVCMGLQCIGEAF------------GGKIVRSPL---GV 70 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~------~~~~~i~~-~~~~~PilGIC~G~Qll~~~~------------gg~v~~~~~---~~ 70 (174)
++|||||+|| |++.... ...+.+++ ...++|+||||+|||+|+.++ |+++.+... ..
T Consensus 44 ~~DglILpGg-G~~~~~~~~l~~~~~~~~i~~~~~~g~PiLGIC~G~QlL~~a~~egg~~~~Lg~lgg~v~~~~~~~~~~ 122 (555)
T 1jvn_A 44 GTSRLILPGV-GNYGHFVDNLFNRGFEKPIREYIESGKPIMGIXVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPV 122 (555)
T ss_dssp TCSCEEEEEC-SCHHHHHHHHHHTTCHHHHHHHHHTTCCEEEEEHHHHTTEEEETTBTTCCCCCSEEEEEEECCTTTSCS
T ss_pred cCCEEEECCC-CchHhHhhhhhhccHHHHHHHHHHcCCcEEEEchhhhhhhhhhhcCCCccccCCCCcEEEECCcCCCCC
Confidence 6899999763 3332211 12344554 467899999999999999998 677766531 11
Q ss_pred cccccceeEeccCCCCCcccCCCCceeecccccceecccC----CCCCCcEEEEEcC---CCceEEEeeCCCCceEEEec
Q 030626 71 MHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHSLVIEKES----FPSDALEVTAWTE---DGLIMAARHKKYKHLQGVQF 143 (174)
Q Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~~~v~~~~----l~~~~~~~~a~s~---~~~i~a~~~~~~~~~~g~Qf 143 (174)
.+..|..+.. . +++|.++++.+.++++|++.+.... ++++++.++|+++ |+.+++++.. +++|+||
T Consensus 123 ~~~G~~~v~~---~-~~L~~~l~~~~~~~~vHS~~~~~i~~~~~~L~~g~~vlA~s~~~~D~~i~ai~~~---~i~GvQF 195 (555)
T 1jvn_A 123 PEIGWNSCIP---S-ENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKN---NIFATQF 195 (555)
T ss_dssp SEEEEECCCC---C-TTCCTTCCTTSCEEEEESEECBCCHHHHHHHHHTTCEEEEEEETTEEEEEEEEET---TEEEESS
T ss_pred ccccceEEEE---c-CHHHhhCCCCceEEEEEEEEEEecccccccCCCCCEEEEEEcCCCCCeEEEEEeC---CEEEEEe
Confidence 1222322222 2 7899988876677788888875411 1135688888886 4578999842 5999999
Q ss_pred CCCCcCCCchHHHHHHHHHH
Q 030626 144 HPESIITTEGKTIVRNFIKM 163 (174)
Q Consensus 144 HPE~~~~~~~~~l~~~f~~~ 163 (174)
|||++ .+.+.+||++|++.
T Consensus 196 HPE~s-~~~g~~l~~~Fl~~ 214 (555)
T 1jvn_A 196 HPEKS-GKAGLNVIENFLKQ 214 (555)
T ss_dssp BGGGS-HHHHHHHHHHHHTT
T ss_pred CcEec-ChhHHHHHHHHHhc
Confidence 99974 45678999999975
No 36
>3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A*
Probab=99.20 E-value=1e-10 Score=105.30 Aligned_cols=150 Identities=21% Similarity=0.246 Sum_probs=91.1
Q ss_pred CCCEEEeCCCCCCC--CCcch-----------hHHHHHH-c-CCCCcEEeehHhHHHHHHH---hCCe-----eccCCCc
Q 030626 13 NPRGVLISPGPGAP--QDSGI-----------SLQTVLE-L-GPTVPLFGVCMGLQCIGEA---FGGK-----IVRSPLG 69 (174)
Q Consensus 13 ~~dgiii~GG~~~~--~~~~~-----------~~~~i~~-~-~~~~PilGIC~G~Qll~~~---~gg~-----v~~~~~~ 69 (174)
++|+||++||.... -..+. +.+.+.+ . .+++|+||||.|||+|+.+ +.|. +.++...
T Consensus 1092 ~~d~lvlPGGfSygD~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllPg~~~~p~l~~N~s~ 1171 (1303)
T 3ugj_A 1092 NFHALVACGGFSYGDVLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIPGSELWPRFVRNHSD 1171 (1303)
T ss_dssp GCSEEEECCSCGGGGTTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGSTTCTTCCEEECCTTS
T ss_pred hCCEEEECCCCcchhhhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCCCCCCCCeEecCCCC
Confidence 58999999995422 11111 1123443 2 5789999999999999975 3444 5555544
Q ss_pred ccccccceeEeccCCCCCcccCCCC-ceeeccccccee---cc-c---CCCCCCcEEEEEc-------------CCC---
Q 030626 70 VMHGKSSLVYYDEKGEDGLLAGLSN-PFTAGRYHSLVI---EK-E---SFPSDALEVTAWT-------------EDG--- 125 (174)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~H~~~v---~~-~---~l~~~~~~~~a~s-------------~~~--- 125 (174)
.....|..+++. ..++++++++.. .+.++-.|+++- .. + .|..++..++-+. +++
T Consensus 1172 ~f~~r~~~~~v~-~~~s~~~~~~~g~~~~i~vaHgEG~~~~~~~~~l~~l~~~~~v~~rY~d~~g~~~~~yp~NPNGS~~ 1250 (1303)
T 3ugj_A 1172 RFEARFSLVEVT-QSPSLLLQGMVGSQMPIAVSHGEGRVEVRDDAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPN 1250 (1303)
T ss_dssp SCEEEEEEEEEC-CCSCGGGTTCTTCEEEEEEEESSCEEECSSHHHHHHHHHTTCEEEEEBCTTSCBCCSTTTSSSCCGG
T ss_pred CeEEeCeEEEEC-CCCChhhhccCCCEEeeeeEeCCCCeeeCCHHHHHHHHhCCcEEEEEeCCCCCcccCCCCCCCCChh
Confidence 333444444444 346778888753 466666776432 11 1 1122344444442 223
Q ss_pred ceEEEeeCCCCceEEEecCCCCcCCC--------------chHHHHHHHHHHH
Q 030626 126 LIMAARHKKYKHLQGVQFHPESIITT--------------EGKTIVRNFIKMI 164 (174)
Q Consensus 126 ~i~a~~~~~~~~~~g~QfHPE~~~~~--------------~~~~l~~~f~~~~ 164 (174)
.|+++.+.+++ ++|++.||||.... ...+||+|-.+++
T Consensus 1251 ~IaGi~s~~Gr-vlg~MpHPEr~~~~~~~~~~p~~~~~~~pw~~~F~na~~w~ 1302 (1303)
T 3ugj_A 1251 GITAVTTENGR-VTIMMPHPERVFRTVANSWHPENWGEDSPWMRIFRNARKQL 1302 (1303)
T ss_dssp GEEEEECTTSS-EEEESSBGGGSSBGGGCSSCCTTCCSBCTTHHHHHHHHHHH
T ss_pred hceEeECCCCC-EEEEcCChHHccccccccCCCcccCCCCcHHHHHHHHHHhc
Confidence 39999999875 99999999985321 2457888866654
No 37
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=97.72 E-value=8.1e-06 Score=60.86 Aligned_cols=50 Identities=10% Similarity=0.072 Sum_probs=34.0
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcch------hHHHHHH-cCCCCcEEeehHhHHHHHHHh
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGI------SLQTVLE-LGPTVPLFGVCMGLQCIGEAF 59 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~------~~~~i~~-~~~~~PilGIC~G~Qll~~~~ 59 (174)
.++|. ++|+|+++||. ...... +.+.|++ +.+++|++|||.|+|+|+...
T Consensus 74 ~~~l~--~ad~I~lpGG~--~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~~~l~~~~ 130 (229)
T 1fy2_A 74 LAAIE--KAEIIIVGGGN--TFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTI 130 (229)
T ss_dssp HHHHH--HCSEEEECCSC--HHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHHHHTSSBS
T ss_pred HHHHh--cCCEEEECCCc--HHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHHHhhcccc
Confidence 35665 47899999853 322211 3345554 457899999999999998743
No 38
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=97.69 E-value=1.8e-05 Score=57.33 Aligned_cols=47 Identities=17% Similarity=0.311 Sum_probs=34.8
Q ss_pred cCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|||+||.+.. .....+.+.+++ ..+++||.|||.|.++|+.+
T Consensus 85 ~~~D~livpGG~~~~~l~~~~~l~~~l~~~~~~gk~i~aIC~G~~lLa~a 134 (193)
T 1oi4_A 85 AEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 (193)
T ss_dssp GGCSEEEECCBTHHHHHTTSHHHHHHHHHHHHTTCCEEEETTTHHHHHHH
T ss_pred ccCCEEEECCCcCHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 368999999995521 122345566665 56789999999999999986
No 39
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=97.61 E-value=1.2e-05 Score=58.96 Aligned_cols=47 Identities=11% Similarity=0.019 Sum_probs=31.9
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCcch------hHHHHHH-cCCCCcEEeehHhHHHHHH
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDSGI------SLQTVLE-LGPTVPLFGVCMGLQCIGE 57 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~~~------~~~~i~~-~~~~~PilGIC~G~Qll~~ 57 (174)
+.+. +.|+|+++||. ...... +.+.+++ ..+++|++|||.|+|+++.
T Consensus 75 ~~l~--~ad~I~l~GG~--~~~l~~~L~~~gl~~~l~~~~~~G~p~~G~sAGa~~l~~ 128 (206)
T 3l4e_A 75 TKLR--KNDFIYVTGGN--TFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSP 128 (206)
T ss_dssp HHHH--HSSEEEECCSC--HHHHHHHHHHHTHHHHHHHHHHTTCEEEEETHHHHTTSS
T ss_pred HHHH--hCCEEEECCCC--HHHHHHHHHHCChHHHHHHHHHcCCeEEEECHHHHHhcc
Confidence 4454 47999998853 322221 2344554 5578999999999999975
No 40
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=97.60 E-value=1.8e-05 Score=56.64 Aligned_cols=52 Identities=15% Similarity=0.069 Sum_probs=38.4
Q ss_pred HHHHhcCCCEEEeCCCCCCCC--CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 7 VSYCRKNPRGVLISPGPGAPQ--DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~--~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
+++...+||+|+|+||.+... +...+.+.+++ ..+++||.+||-|-.+|+.+
T Consensus 63 ~~v~~~~yD~liiPGG~g~~~l~~~~~~~~~l~~~~~~~k~iaaIC~g~~~La~a 117 (177)
T 4hcj_A 63 SEVDAVEFDAVVFVGGIGCITLWDDWRTQGLAKLFLDNQKIVAGIGSGVVIMANA 117 (177)
T ss_dssp GGCCGGGCSEEEECCSGGGGGGTTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred HHCCHhHCCEEEECCCccHHHHhhCHHHHHHHHHHHHhCCEEEEecccHHHHHHC
Confidence 344445799999999987432 33445566665 56789999999999999875
No 41
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=97.48 E-value=2.4e-05 Score=58.30 Aligned_cols=49 Identities=14% Similarity=0.162 Sum_probs=36.8
Q ss_pred cCCCEEEeCCCCCC---CCC----------cchhHHHHHH-cCCCCcEEeehHhHHHHHHHhC
Q 030626 12 KNPRGVLISPGPGA---PQD----------SGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFG 60 (174)
Q Consensus 12 ~~~dgiii~GG~~~---~~~----------~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~g 60 (174)
.++|+|||+||.+. ..+ ...+.+.+++ ..+++||.+||-|-++|+.++.
T Consensus 89 ~~~D~livpGG~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~aL~ 151 (232)
T 1vhq_A 89 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFD 151 (232)
T ss_dssp GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHHTTCCEEEETTGGGGHHHHCS
T ss_pred ccCCEEEECCCcchHHHHhhhhccccccccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHHhc
Confidence 36899999999764 222 3345566665 5678999999999999998843
No 42
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=97.47 E-value=1.9e-05 Score=55.74 Aligned_cols=47 Identities=13% Similarity=0.219 Sum_probs=35.2
Q ss_pred cCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|+|+||.+.. .....+.+.+++ ..+++||.+||.|.++|+.+
T Consensus 62 ~~~D~livpGG~~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 111 (168)
T 3l18_A 62 DEFDALVLPGGKAPEIVRLNEKAVMITRRMFEDDKPVASICHGPQILISA 111 (168)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred hhCCEEEECCCcCHHHhccCHHHHHHHHHHHHCCCEEEEECHhHHHHHHC
Confidence 358999999997532 123345566665 56789999999999999975
No 43
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=97.36 E-value=0.00023 Score=52.03 Aligned_cols=46 Identities=15% Similarity=0.271 Sum_probs=36.1
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
++|.|||+||.+.......+.+.+++ ..++++|.+||-|..+|+.+
T Consensus 63 ~~D~livpGG~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~a 109 (206)
T 3f5d_A 63 NFNLLVMIGGDSWSNDNKKLLHFVKTAFQKNIPIAAICGAVDFLAKN 109 (206)
T ss_dssp CCSEEEECCBSCCCCCCHHHHHHHHHHHHTTCCEEEETHHHHHHHHT
T ss_pred CCCEEEEcCCCChhhcCHHHHHHHHHHHHcCCEEEEECHHHHHHHHc
Confidence 68999999998654433445566665 56789999999999999975
No 44
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=97.25 E-value=5e-05 Score=54.58 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=34.6
Q ss_pred cCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|||+||.+.. .....+.+.+++ ..+++||.+||.|.++|+.+
T Consensus 74 ~~~D~livpGG~~~~~~~~~~~~l~~~l~~~~~~gk~i~aiC~G~~~La~a 124 (190)
T 2vrn_A 74 SDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGPWSLSET 124 (190)
T ss_dssp GGCSEEEECCCTHHHHHHTTCHHHHHHHHHHHHTTCCEEEC-CTTHHHHHT
T ss_pred hhCCEEEECCCchhHHHHhhCHHHHHHHHHHHHcCCEEEEECHhHHHHHhC
Confidence 368999999997433 233445566665 56789999999999999985
No 45
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=97.21 E-value=8.6e-05 Score=53.73 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=37.2
Q ss_pred HHH-HhcCCCEEEeCCCCCCCC---CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 7 VSY-CRKNPRGVLISPGPGAPQ---DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 7 ~~~-~~~~~dgiii~GG~~~~~---~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
+++ ...++|+|||+||.+... ....+.+.+++ ..+++||.+||.|.++|+.+
T Consensus 59 ~~~~~~~~~D~livpGG~~~~~~l~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 115 (197)
T 2rk3_A 59 EDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIATICAGPTALLAH 115 (197)
T ss_dssp HHHHTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred HHcCCccCCCEEEECCCchhHHHhhhCHHHHHHHHHHHHcCCEEEEECHHHHHHHHC
Confidence 444 335799999999974332 22334555655 56789999999999999976
No 46
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=97.17 E-value=0.00016 Score=54.33 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=36.1
Q ss_pred cCCCEEEeCCCCCCC--------------CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHh
Q 030626 12 KNPRGVLISPGPGAP--------------QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAF 59 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--------------~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~ 59 (174)
.++|+|||+||.+.. .....+.+.+++ ..+++||.+||-|..+|+.+-
T Consensus 106 ~~~D~livPGG~~~~~~L~~~~~~~~~~~~~~~~l~~~lr~~~~~gk~IaaIC~G~~~La~ag 168 (242)
T 3l3b_A 106 EEFDMLVIPGGYGVAKNFSNLFDEDKENDYILPEFKNAVREFYNAKKPIGAVCISPAVVVALL 168 (242)
T ss_dssp GGCSEEEECCCHHHHHHHBSTTSCC--CCCBCHHHHHHHHHHHHTTCCEEEETTHHHHHHHHH
T ss_pred ccCCEEEEcCCcchhhhhhhhhccccccccCCHHHHHHHHHHHHcCCEEEEECHHHHHHHHhC
Confidence 368999999997631 122345566665 567899999999999999875
No 47
>3cne_A Putative protease I; structural genomics, PSI-2, MCSG, protein struct initiative, midwest center for structural genomics; HET: FMN; 1.99A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.15 E-value=0.00012 Score=51.96 Aligned_cols=47 Identities=13% Similarity=0.052 Sum_probs=34.3
Q ss_pred cCCCEEEeCCC--C-CCCC-----CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPG--P-GAPQ-----DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG--~-~~~~-----~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|.||++|| . +... ....+.+.+++ ..+++||.+||.|.++|+.+
T Consensus 65 ~~~D~livpGG~~~~~~~~l~~~~~~~~~~~~l~~~~~~gk~i~aiC~G~~~La~a 120 (175)
T 3cne_A 65 DEFDALVFSCGDAVPVFQQYANQPYNVDLMEVIKTFGEKGKMMIGHCAGAMMFDFT 120 (175)
T ss_dssp GGCSEEEEECCTTGGGGGGCTTCHHHHHHHHHHHHHHHTTCEEEEETTHHHHHHHT
T ss_pred ccCCEEEECCCcCcccHHHHhhcccCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 36899999999 5 4322 12334555655 56789999999999999976
No 48
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=97.06 E-value=8.5e-05 Score=54.19 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=37.6
Q ss_pred HHHHHhcCCCEEEeCCCCCCCC---CcchhHHHHHH-cCCCCcEEeehHhH-HHHHHH
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQ---DSGISLQTVLE-LGPTVPLFGVCMGL-QCIGEA 58 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~---~~~~~~~~i~~-~~~~~PilGIC~G~-Qll~~~ 58 (174)
++++...++|+|||+||.+... ....+.+.+++ ..+++||.+||.|. ++|+.+
T Consensus 59 l~~~~~~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~~~lLa~a 116 (205)
T 2ab0_A 59 LVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPH 116 (205)
T ss_dssp HHHHTTSCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETHHHHHHTTTT
T ss_pred HHHCCcccCCEEEECCCcccHHHhccCHHHHHHHHHHHHcCCEEEEECHhHHHHHHHC
Confidence 3455445799999999975332 22334555655 56789999999999 999864
No 49
>3gra_A Transcriptional regulator, ARAC family; transcription regulator, PSI-II, structural genomics structure initiative; 2.30A {Pseudomonas putida}
Probab=97.02 E-value=0.00066 Score=49.37 Aligned_cols=47 Identities=17% Similarity=0.138 Sum_probs=36.5
Q ss_pred cCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|.|||+||.+.......+++.+++ ..++++|.+||-|..+|+.+
T Consensus 70 ~~~D~livpGG~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 117 (202)
T 3gra_A 70 KELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRA 117 (202)
T ss_dssp TTCSEEEEECCTTCCSCCTTHHHHHHHHHHHTCEEEEETTHHHHHHHH
T ss_pred CCCCEEEEeCCCchhhccHHHHHHHHHHHhhCCEEEEECHHHHHHHHc
Confidence 468999999998755433445566665 55779999999999999986
No 50
>2fex_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, MIDW center for structural genomics, MCSG; 1.70A {Agrobacterium tumefaciens} SCOP: c.23.16.2
Probab=96.99 E-value=0.00032 Score=50.27 Aligned_cols=46 Identities=13% Similarity=0.135 Sum_probs=34.7
Q ss_pred CCCEEEeCCCCCCC-CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAP-QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~-~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
++|+|||+||.+.. .....+.+.+++ ..+++||.+||-|.++|+.+
T Consensus 63 ~~D~livpGG~~~~~~~~~~l~~~l~~~~~~~k~i~aiC~G~~~La~a 110 (188)
T 2fex_A 63 DIDALVIPGGLSWEKGTAADLGGLVKRFRDRDRLVAGICAAASALGGT 110 (188)
T ss_dssp TCSEEEECCBSHHHHTCCCCCHHHHHHHHHTTCEEEEETHHHHHHHHT
T ss_pred cCCEEEECCCCcccccccHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 68999999997532 223445566665 55789999999999999975
No 51
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=96.93 E-value=0.00017 Score=53.19 Aligned_cols=47 Identities=15% Similarity=0.189 Sum_probs=36.2
Q ss_pred cCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|||+||.+.. .....+.+.+++ ..+++||.+||-|.++|+.+
T Consensus 88 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~~k~iaaiC~G~~~La~a 138 (224)
T 1u9c_A 88 HGFDAIFLPGGHGTMFDFPDNETLQYVLQQFAEDGRIIAAVCHGPSGLVNA 138 (224)
T ss_dssp SSCSEEEECCCTTHHHHSTTCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hhCCEEEECCCcchHHHhhcCHHHHHHHHHHHHCCCEEEEEChHHHHHHHc
Confidence 469999999998753 233445566665 56789999999999999865
No 52
>3efe_A THIJ/PFPI family protein; structural GEN csgid, center for structural genomics of infectious disease chaperone; 2.30A {Bacillus anthracis}
Probab=96.89 E-value=0.00049 Score=50.40 Aligned_cols=47 Identities=9% Similarity=0.111 Sum_probs=35.0
Q ss_pred cCCCEEEeCCCCCCCC-CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAPQ-DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~-~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
..+|.|||+||.+... ....+.+.+++ ..++++|.+||-|..+|+.+
T Consensus 73 ~~~D~livpGG~~~~~~~~~~l~~~l~~~~~~gk~iaaiC~G~~~La~a 121 (212)
T 3efe_A 73 ESKDLLILPGGTTWSEEIHQPILERIGQALKIGTIVAAICGATDALANM 121 (212)
T ss_dssp CTTCEEEECCCSCTTSGGGHHHHHHHHHHHHHTCEEEEETHHHHHHHHT
T ss_pred cCCCEEEECCCCccccccCHHHHHHHHHHHHCCCEEEEEcHHHHHHHHc
Confidence 3699999999976432 22334555654 56789999999999999975
No 53
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=96.70 E-value=0.00023 Score=51.18 Aligned_cols=51 Identities=10% Similarity=0.127 Sum_probs=35.8
Q ss_pred HHHhcCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 8 SYCRKNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 8 ~~~~~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
++...++|.|+|+||.... .....+.+.+++ ..+++||.+||-|.++|+.+
T Consensus 62 ~~~~~~~D~livpGG~~~~~~~~~~~~~~~~l~~~~~~~k~i~aiC~G~~~La~a 116 (190)
T 4e08_A 62 QVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVLAKH 116 (190)
T ss_dssp GGTTCCCSEEEECCCHHHHHHHHHCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred HCCcccCCEEEECCCChHHHHhhhCHHHHHHHHHHHHCCCEEEEECHHHHHHHHC
Confidence 3433468999999994322 122344555655 56789999999999999975
No 54
>3er6_A Putative transcriptional regulator protein; structural genomics, unknown function, DNA-binding, transcription regulation, PSI-2; 1.90A {Vibrio parahaemolyticus}
Probab=96.67 E-value=0.0008 Score=49.17 Aligned_cols=46 Identities=9% Similarity=-0.004 Sum_probs=35.3
Q ss_pred CCCEEEeCCCCCCCC----CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAPQ----DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~~----~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
++|.|||+||.+... ....+++.+++ ..++++|.+||-|..+|+.+
T Consensus 74 ~~D~livpGg~~~~~~~~~~~~~l~~~l~~~~~~g~~iaaIC~G~~~La~a 124 (209)
T 3er6_A 74 FTNILIIGSIGDPLESLDKIDPALFDWIRELHLKGSKIVAIDTGIFVVAKA 124 (209)
T ss_dssp CCSEEEECCCSCHHHHGGGSCHHHHHHHHHHHHTTCEEEEETTHHHHHHHH
T ss_pred CCCEEEECCCCCchhhhccCCHHHHHHHHHHHhcCCEEEEEcHHHHHHHHc
Confidence 689999999975322 23445566665 56789999999999999986
No 55
>3noq_A THIJ/PFPI family protein; DJ-1 superfamily, isocyanide hydratase, isonitrIle hydratase; HET: NHE; 1.00A {Pseudomonas fluorescens} PDB: 3noo_A 3non_A 3nor_A* 3nov_A
Probab=96.61 E-value=0.0018 Score=48.08 Aligned_cols=46 Identities=17% Similarity=0.182 Sum_probs=36.1
Q ss_pred CCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.+|.|+|+||++.. .....+++.+++ ..++++|.+||-|..+|+.+
T Consensus 65 ~~D~livpGG~g~~~~~~~~~l~~~lr~~~~~g~~v~aiC~G~~~La~a 113 (231)
T 3noq_A 65 PLDVICIPGGTGVGALMEDPQALAFIRQQAARARYVTSVSTGSLVLGAA 113 (231)
T ss_dssp CCSEEEECCSTTHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHT
T ss_pred cCCEEEECCCCChhhhccCHHHHHHHHHHHhcCCEEEEECHHHHHHHHc
Confidence 58999999997642 233455666765 67889999999999999875
No 56
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=96.58 E-value=0.00032 Score=52.79 Aligned_cols=48 Identities=13% Similarity=0.090 Sum_probs=35.8
Q ss_pred hcCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 11 RKNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 11 ~~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
..+||+|+|+||.+.. .....+.+.+++ ..+++||-+||-|-.+|+.+
T Consensus 103 ~~~yD~l~ipGG~g~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~Gp~~La~a 154 (247)
T 3n7t_A 103 PHDYGLMFVCGGHGALYDFPHAKHLQNIAQDIYKRGGVIGAVCHGPAMLPGI 154 (247)
T ss_dssp GGGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGC
T ss_pred hhhCCEEEEeCCCchhhhcccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHh
Confidence 3469999999998752 223345566665 56789999999999999765
No 57
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=96.38 E-value=0.00047 Score=51.73 Aligned_cols=47 Identities=13% Similarity=0.115 Sum_probs=35.4
Q ss_pred cCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.+||+|+|+||.+.. .....+.+.+++ ..+++||-+||-|-.+|+.+
T Consensus 97 ~~yD~l~vpGG~~~~~~l~~~~~l~~~l~~~~~~gk~iaaIC~G~~~La~a 147 (244)
T 3kkl_A 97 SDYKVFFASAGHGALFDYPKAKNLQDIASKIYANGGVIAAICHGPLLFDGL 147 (244)
T ss_dssp GGCSEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hhCCEEEEcCCCchhhhcccCHHHHHHHHHHHHcCCEEEEECHHHHHHHHh
Confidence 468999999998752 233345566655 56789999999999999865
No 58
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=96.24 E-value=0.00042 Score=51.86 Aligned_cols=46 Identities=15% Similarity=0.087 Sum_probs=34.8
Q ss_pred CCCEEEeCCCCCCCC---CcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAPQ---DSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~~---~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
++|+|||+||.+... ....+.+.+++ ..+++||.+||-|-.+|+.+
T Consensus 98 ~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~vaaIC~G~~~La~a 147 (243)
T 1rw7_A 98 DYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGL 147 (243)
T ss_dssp GEEEEEECCSTTHHHHGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGTTC
T ss_pred hCcEEEECCCCCchhhcccCHHHHHHHHHHHHcCCEEEEECCCHHHHHhc
Confidence 589999999987432 23345566665 56789999999999988865
No 59
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=96.22 E-value=0.0013 Score=52.58 Aligned_cols=47 Identities=21% Similarity=0.335 Sum_probs=35.6
Q ss_pred cCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|.||++||.+.. .....+.+.+++ ..+++||.+||-|.++|+.+
T Consensus 281 ~~~D~livpGg~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~g~~~La~a 330 (396)
T 3uk7_A 281 SSYDALVIPGGRAPEYLALNEHVLNIVKEFMNSEKPVASICHGQQILAAA 330 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEEGGGHHHHHHT
T ss_pred ccCCEEEECCCcchhhhccCHHHHHHHHHHHHCCCEEEEEchHHHHHHHc
Confidence 368999999997532 233445566665 56789999999999999976
No 60
>3ewn_A THIJ/PFPI family protein; monomer, PSI nysgrc, structural genomics, protein structure initiative; 1.65A {Pseudomonas syringae PV}
Probab=96.18 E-value=0.0028 Score=47.70 Aligned_cols=46 Identities=17% Similarity=0.246 Sum_probs=35.7
Q ss_pred CCCEEEeCCCC-CCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGP-GAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~-~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.||.|||+||. +.. .....+++.+++ ..++++|.+||-|..+|+.+
T Consensus 84 ~yD~liVPGG~~g~~~l~~~~~l~~~Lr~~~~~gk~IaaICtG~~lLa~A 133 (253)
T 3ewn_A 84 DLTVLFAPGGTDGTLAAASDAETLAFMADRGARAKYITSVCSGSLILGAA 133 (253)
T ss_dssp SCSEEEECCBSHHHHHHTTCHHHHHHHHHHHTTCSEEEEETTHHHHHHHT
T ss_pred CCCEEEECCCccchhhhccCHHHHHHHHHHHHcCCEEEEEChHHHHHHHc
Confidence 57999999997 532 234456666765 67889999999999999875
No 61
>3fse_A Two-domain protein containing DJ-1/THIJ/PFPI-like ferritin-like domains; structural genomics; HET: MSE CSX; 1.90A {Anabaena variabilis atcc 29413}
Probab=96.02 E-value=0.0013 Score=52.12 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=35.5
Q ss_pred cCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|.|||+||.+.. .....+.+.+++ ..++++|.+||-|..+|+.+
T Consensus 72 ~~~DaLiVPGG~g~~~l~~~~~l~~~Lr~~~~~gk~IaAIC~G~~lLA~A 121 (365)
T 3fse_A 72 SEFDAVVIPGGMAPDKMRRNPNTVRFVQEAMEQGKLVAAVCHGPQVLIEG 121 (365)
T ss_dssp GGCSEEEECCBTHHHHHTTCHHHHHHHHHHHHTTCEEEEETTTHHHHHHT
T ss_pred cCCCEEEEECCcchhhccCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHc
Confidence 358999999998532 233445566665 56789999999999999975
No 62
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=96.00 E-value=0.00042 Score=50.58 Aligned_cols=47 Identities=13% Similarity=0.137 Sum_probs=34.6
Q ss_pred cCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhH-HHHHHH
Q 030626 12 KNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGL-QCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~-Qll~~~ 58 (174)
.++|.|||+||.+.. .....+.+.+++ ..++++|.+||-|. .+|+.+
T Consensus 70 ~~~D~livpGG~~~~~~l~~~~~l~~~l~~~~~~gk~i~aiC~G~a~~La~a 121 (208)
T 3ot1_A 70 EAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALVFAKQ 121 (208)
T ss_dssp GGCSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHTTTTT
T ss_pred cCCCEEEECCCchHHHHHhhCHHHHHHHHHHHHcCCEEEEEChhHHHHHHHC
Confidence 368999999996422 233445566665 56789999999998 888863
No 63
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=95.96 E-value=0.0089 Score=50.93 Aligned_cols=49 Identities=12% Similarity=0.077 Sum_probs=36.7
Q ss_pred HhcCCCEEEeCCCCCCC----------CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 10 CRKNPRGVLISPGPGAP----------QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 10 ~~~~~dgiii~GG~~~~----------~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
....||+|||+||.... ......+..+++ ...++||-.||-|-++|..+
T Consensus 587 ~s~~fDAVvlPGG~~~~~~~~~~~d~Lr~~~~a~~fV~e~~~hgKpIAAIchgp~lL~~A 646 (688)
T 3ej6_A 587 DATAFDAVVVAEGAERVFSGKGAMSPLFPAGRPSQILTDGYRWGKPVAAVGSAKKALQSI 646 (688)
T ss_dssp CGGGCSEEEECTTCCTTTSTTTTCCTTSCTTHHHHHHHHHHHTTCCEEEEGGGHHHHHHT
T ss_pred ChhcCcEEEECCCcccccccccchhhhccCHHHHHHHHHHHHcCCEEEEeCccHHHHHHc
Confidence 34469999999996541 233445566665 67889999999999999865
No 64
>3mgk_A Intracellular protease/amidase related enzyme (THIJ family); amidotranferase-like, structural genomics, PSI; 2.00A {Clostridium acetobutylicum}
Probab=95.91 E-value=0.0013 Score=48.20 Aligned_cols=45 Identities=13% Similarity=0.285 Sum_probs=33.8
Q ss_pred CCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 14 PRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 14 ~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
+|.|||+||.+.. .....+++.+++ ..++++|.+||-|..+|+.+
T Consensus 66 ~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~k~iaaiC~G~~~La~a 113 (211)
T 3mgk_A 66 EKILFVPGGSGTREKVNDDNFINFIGNMVKESKYIISVCTGSALLSKA 113 (211)
T ss_dssp EEEEEECCSTHHHHHTTCHHHHHHHHHHHHHCSEEEECTTHHHHHHHT
T ss_pred CCEEEECCCcchhhhcCCHHHHHHHHHHHHcCCEEEEEchHHHHHHhc
Confidence 7999999997642 123345566665 55779999999999999975
No 65
>3uk7_A Class I glutamine amidotransferase-like domain-CO protein; rossmann fold, cytosol; 2.05A {Arabidopsis thaliana}
Probab=95.89 E-value=0.002 Score=51.47 Aligned_cols=47 Identities=19% Similarity=0.306 Sum_probs=35.4
Q ss_pred cCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|+++||.+.. .....+.+.+++ ..+++||.+||-|.++|+.+
T Consensus 88 ~~~D~livpGG~~~~~~~~~~~~~~~l~~~~~~~~~i~aiC~G~~~La~a 137 (396)
T 3uk7_A 88 SKYDGLVIPGGRAPEYLALTASVVELVKEFSRSGKPIASICHGQLILAAA 137 (396)
T ss_dssp GGCSEEEECCBSHHHHHTTCHHHHHHHHHHHHTTCCEEEETTTHHHHHHT
T ss_pred ccCCEEEECCCcchhhcccCHHHHHHHHHHHHcCCEEEEECchHHHHHhc
Confidence 368999999997532 223345566665 56789999999999999976
No 66
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=95.86 E-value=0.0016 Score=50.01 Aligned_cols=47 Identities=13% Similarity=0.122 Sum_probs=35.3
Q ss_pred cCCCEEEeCCCCCCCCC---cchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 12 KNPRGVLISPGPGAPQD---SGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~---~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
.++|+|||+||.+...+ ...+.+.+++ ..++++|.+||-|-.+|+.+
T Consensus 144 ~~yD~livPGG~g~~~~l~~~~~l~~~l~~~~~~gk~VaaIC~Gp~~La~a 194 (291)
T 1n57_A 144 SEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLAL 194 (291)
T ss_dssp CSEEEEEECCSGGGGSSGGGCHHHHHHHHHHHHTTCEEEEETTGGGGGGGG
T ss_pred ccCCEEEecCCcchhhhhhhCHHHHHHHHHHHHcCCEEEEECccHHHHHhh
Confidence 46899999999775422 2345566665 56789999999999988765
No 67
>3bhn_A THIJ/PFPI domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.76A {Shewanella loihica pv-4}
Probab=95.76 E-value=0.0026 Score=47.42 Aligned_cols=45 Identities=24% Similarity=0.416 Sum_probs=33.5
Q ss_pred CCCEEEeCCC-CCCC--CCcchhHHHHHHcCCCC-cEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPG-PGAP--QDSGISLQTVLELGPTV-PLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG-~~~~--~~~~~~~~~i~~~~~~~-PilGIC~G~Qll~~~ 58 (174)
++|.|||+|| ++.. .....+.+.+ ...++. +|.+||-|-.+|+.+
T Consensus 80 ~~D~liVPGG~~g~~~l~~~~~l~~~L-~~~~~~~~IaaIC~G~~lLa~A 128 (236)
T 3bhn_A 80 EQDVVLITSGYRGIPAALQDENFMSAL-KLDPSRQLIGSICAGSFVLHEL 128 (236)
T ss_dssp GCSEEEECCCTTHHHHHHTCHHHHHHC-CCCTTTCEEEEETTHHHHHHHT
T ss_pred CCCEEEEcCCccCHhhhccCHHHHHHH-HhCCCCCEEEEEcHHHHHHHHc
Confidence 5899999999 5532 1233455566 656666 999999999999976
No 68
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=95.10 E-value=0.0038 Score=53.62 Aligned_cols=47 Identities=13% Similarity=0.078 Sum_probs=35.6
Q ss_pred hcCCCEEEeCCCCCCC--CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 11 RKNPRGVLISPGPGAP--QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 11 ~~~~dgiii~GG~~~~--~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
...||+|||+|| +.. .....++..+++ ...++||-+||-|-++|+.+
T Consensus 659 s~~fDALVVPGG-g~~~Lr~d~~vl~~Vre~~~~gKpIAAIC~Gp~lLa~A 708 (753)
T 3ttv_A 659 SLTVDAVIVPCG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATI 708 (753)
T ss_dssp GGGCSEEEECCS-CGGGTTTCHHHHHHHHHHHHTTCCEEEEGGGGGGGGGG
T ss_pred CcCCCEEEECCC-ChHHhhhCHHHHHHHHHHHhcCCeEEEECchHHHHHHc
Confidence 345899999999 432 234455666665 66789999999999999865
No 69
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=94.74 E-value=0.025 Score=48.26 Aligned_cols=49 Identities=12% Similarity=0.132 Sum_probs=35.8
Q ss_pred HhcCCCEEEeCCCCCC-------------------CCCcchhHHHHHH-cCCCCcEEeehHhHHHHHHH
Q 030626 10 CRKNPRGVLISPGPGA-------------------PQDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 10 ~~~~~dgiii~GG~~~-------------------~~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~ 58 (174)
....||+|||+||... -......+..+++ ...++||-.||-|-++|..+
T Consensus 580 ~s~~fDAVvlPGG~~g~~~~~~~~~~~~~~~~~~~L~~~~~~~~~v~~~~~~gKpIaAIc~ap~vL~~a 648 (688)
T 2iuf_A 580 DAVQFDAVVVADGAEGLFGADSFTVEPSAGSGASTLYPAGRPLNILLDAFRFGKTVGALGSGSDALESG 648 (688)
T ss_dssp CGGGCSEEEECTTCGGGCCTTTTTCCCCTTSCCCSSSCTTHHHHHHHHHHHHTCEEEEEGGGHHHHHHT
T ss_pred CccccCeEEecCCCcccccccccccccccccchhhcccChHHHHHHHHHHHcCCEEEEECchHHHHHHc
Confidence 3457999999999533 1233445566665 56789999999999988764
No 70
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=94.64 E-value=0.011 Score=50.68 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=36.3
Q ss_pred cCCCEEEeCCCCCCC---CCcchhHHHHHH-cCCCCcEEeehHhHHHHHHHhC
Q 030626 12 KNPRGVLISPGPGAP---QDSGISLQTVLE-LGPTVPLFGVCMGLQCIGEAFG 60 (174)
Q Consensus 12 ~~~dgiii~GG~~~~---~~~~~~~~~i~~-~~~~~PilGIC~G~Qll~~~~g 60 (174)
..+|+|||+||.+.. .....+++.+++ ..+++||.+||-|..+|+.++|
T Consensus 594 ~~yDaViVPGG~~~~~~l~~~~~l~~~Lr~~~~~gK~IaAIC~G~~lLA~AlG 646 (715)
T 1sy7_A 594 TMVDAIFIPGGAKAAETLSKNGRALHWIREAFGHLKAIGATGEAVDLVAKAIA 646 (715)
T ss_dssp GGSSEEEECCCHHHHHHHHTCHHHHHHHHHHHHTTCEEEEETTHHHHHHHHHC
T ss_pred ccCCEEEEcCCcccHhhhccCHHHHHHHHHHHhCCCEEEEECHHHHHHHHccC
Confidence 358999999995322 223445566665 5678999999999999998864
No 71
>4gdh_A DJ-1, uncharacterized protein C22E12.03C; unknown function, cysteine oxidation; 1.05A {Schizosaccharomyces pombe} PDB: 4ge3_A 4ge0_A
Probab=93.28 E-value=0.034 Score=39.92 Aligned_cols=45 Identities=18% Similarity=0.163 Sum_probs=30.9
Q ss_pred CCCEEEeCCCCCCC---CCcchhHHHHHHc-C-CCCcEEeehHhHHHHHHH
Q 030626 13 NPRGVLISPGPGAP---QDSGISLQTVLEL-G-PTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 13 ~~dgiii~GG~~~~---~~~~~~~~~i~~~-~-~~~PilGIC~G~Qll~~~ 58 (174)
+||+|||+||.+.. .+...+.+.+++. . .++++-.||-|.. |+.+
T Consensus 73 ~yD~lvvPGG~~~~~~l~~~~~l~~~l~~~~~~~~k~iaaiC~g~~-l~~a 122 (194)
T 4gdh_A 73 QYDIAIIPGGGLGAKTLSTTPFVQQVVKEFYKKPNKWIGMICAGTL-TAKT 122 (194)
T ss_dssp HCSEEEECCCHHHHHHHHTCHHHHHHHHHHTTCTTCEEEEEGGGGH-HHHH
T ss_pred cCCEEEECCCchhHhHhhhCHHHHHHHHHhhhcCCceEEeeccccc-chhh
Confidence 58999999995432 2344556777663 3 4789999999984 4433
No 72
>2r47_A Uncharacterized protein MTH_862; unknown function, structural genomics, APC5901, PSI-2; 1.88A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=89.82 E-value=0.066 Score=36.97 Aligned_cols=39 Identities=21% Similarity=0.234 Sum_probs=26.7
Q ss_pred cCCCEEEeCCCCCCCC---CcchhHHHHHHc-CCCCcEEeehH
Q 030626 12 KNPRGVLISPGPGAPQ---DSGISLQTVLEL-GPTVPLFGVCM 50 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~---~~~~~~~~i~~~-~~~~PilGIC~ 50 (174)
.++|.|||.||-.-|. ......+.+.++ ....+++|||+
T Consensus 83 ~~~D~vVllGGLAMPk~~v~~e~v~~li~ki~~~~~kiiGvCF 125 (157)
T 2r47_A 83 GNVDVLVLLGGLSMPGIGSDIEDVKKLVEDALEEGGELMGLCY 125 (157)
T ss_dssp CCEEEEEEEGGGGSTTTSCCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCEEEEeccccCCCCCCCHHHHHHHHHHhhcCCCCEEEEEh
Confidence 4789999999977664 233344445553 34577999995
No 73
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=86.40 E-value=0.26 Score=37.74 Aligned_cols=50 Identities=12% Similarity=0.203 Sum_probs=33.7
Q ss_pred HHHHHhcCCCEEEeCCCCCCCC----CcchhHHHHHH-cCCC-CcEEeehHhHHHHHH
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQ----DSGISLQTVLE-LGPT-VPLFGVCMGLQCIGE 57 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~----~~~~~~~~i~~-~~~~-~PilGIC~G~Qll~~ 57 (174)
.+.|. +.|+|+++||.-... ....+.+.|++ ..++ +|+.|+|.|.-+++.
T Consensus 105 ~~~l~--~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~~GtSAGA~i~~~ 160 (291)
T 3en0_A 105 RLFVE--QCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISLAGTSAGAAVMGH 160 (291)
T ss_dssp HHHHH--HCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEEEEETHHHHTTSS
T ss_pred HHHHh--cCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEEEEeCHHHHhhhH
Confidence 44454 579999999854221 12234455654 5667 999999999998865
No 74
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=82.96 E-value=3.1 Score=27.35 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=31.2
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHH
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQC 54 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Ql 54 (174)
...++..+....+||+..|.. ..++.+..++ .++.++|=|+|.++
T Consensus 73 ~~v~e~~~~g~k~v~~~~G~~----~~e~~~~a~~--~Girvv~nC~gv~l 117 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIFNPGTE----NEELEEILSE--NGIEPVIGCTLVML 117 (122)
T ss_dssp GGHHHHHHHCCSEEEECTTCC----CHHHHHHHHH--TTCEEEESCHHHHH
T ss_pred HHHHHHHhcCCCEEEECCCCC----hHHHHHHHHH--cCCeEECCcCeEEe
Confidence 456777777888999998853 2233333333 56999999999876
No 75
>1ehs_A STB, heat-stable enterotoxin B; disulfide; NMR {Escherichia coli} SCOP: g.2.1.1
Probab=80.75 E-value=0.26 Score=25.59 Aligned_cols=17 Identities=35% Similarity=0.520 Sum_probs=13.0
Q ss_pred cEEeehHhHHHHHHHhC
Q 030626 44 PLFGVCMGLQCIGEAFG 60 (174)
Q Consensus 44 PilGIC~G~Qll~~~~g 60 (174)
-.-|-|+|.|+|..+-|
T Consensus 31 gtagacfgaqimvaakg 47 (48)
T 1ehs_A 31 GTAGACFGAQIMVAAKG 47 (48)
T ss_dssp SSCCTTTTTHHHHTTTT
T ss_pred CccccccchhHhhhccc
Confidence 45688999999986543
No 76
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=70.47 E-value=3.7 Score=32.28 Aligned_cols=46 Identities=15% Similarity=0.294 Sum_probs=32.3
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEe
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFG 47 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilG 47 (174)
+...++.+.+..++||||-| |.|+......+.+.+.+ ..+++||.=
T Consensus 242 ~~~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~~~l~~a~~~Gi~VV~ 289 (358)
T 2him_A 242 SADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVN 289 (358)
T ss_dssp CHHHHHHHTSSSCSEEEEEEBTTTBCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEecCCCCCCCCcHHHHHHHHHHHHCCCEEEE
Confidence 44566667666799999998 88887643456666664 567788864
No 77
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=70.25 E-value=1.1 Score=37.46 Aligned_cols=53 Identities=17% Similarity=0.288 Sum_probs=36.9
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee---------------hHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV---------------CMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI---------------C~G~Qll~~ 57 (174)
..+.+.+++.|++|+-||.++......+.+...+...++|+.|| |+||...+.
T Consensus 158 ~~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~~~~i~vIGiPkTIDNDl~~t~id~tiGFdTA~~ 225 (555)
T 2f48_A 158 ALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATK 225 (555)
T ss_dssp HHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcHHHHHHHHHHHHHHhCCCCcEEEeccccCCCCCCCcCCCCCChhHHHH
Confidence 45567778999999999988755444444444444556777762 889887654
No 78
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=70.07 E-value=0.96 Score=37.09 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=38.4
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee-------------hHhHHHHHH
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV-------------CMGLQCIGE 57 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI-------------C~G~Qll~~ 57 (174)
+..+.+.+++.|+||+-||.++......+.+.+.+..-++|+.|| |+||...+.
T Consensus 180 ~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~ 246 (487)
T 2hig_A 180 EMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVE 246 (487)
T ss_dssp HHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHH
Confidence 345667788999999999988755444444444444556777775 999998764
No 79
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=67.74 E-value=7.1 Score=30.25 Aligned_cols=45 Identities=7% Similarity=0.151 Sum_probs=31.8
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-c-CCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-L-GPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~-~~~~PilGI 48 (174)
+.+.++.+.+..++||||-| |.|+.. ..+.+.+.+ . .+++||.=+
T Consensus 228 ~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~~gi~VV~~ 275 (331)
T 1agx_A 228 MPDAYQAFAKAGVKAIIHAGTGNGSMA--NYLVPEVRKLHDEQGLQIVRS 275 (331)
T ss_dssp CTHHHHHHHTTTCSEEEEEEBTTTBCC--TTHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHcCCCEEEEE
Confidence 45566777666799999998 777765 455666664 5 778998744
No 80
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=66.67 E-value=5.4 Score=30.89 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=30.6
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEe
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFG 47 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilG 47 (174)
+...++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=
T Consensus 230 ~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~VV~ 275 (327)
T 1o7j_A 230 PEYLYDAAIQHGVKGIVYAGMGAGSVS--VRGIAGMRKALEKGVVVMR 275 (327)
T ss_dssp CTHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCceEEE
Confidence 45566777666799999988 777765 455565654 566788764
No 81
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=65.26 E-value=5.9 Score=30.71 Aligned_cols=45 Identities=18% Similarity=0.218 Sum_probs=30.7
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+...++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 231 ~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~VV~~ 277 (332)
T 2wlt_A 231 TPDLFQASLNSHAKGVVIAGVGNGNVS--AGFLKAMQEASQMGVVIVRS 277 (332)
T ss_dssp CTHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCEEEEE
Confidence 45566777666799999988 777765 455565654 5667887643
No 82
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=64.82 E-value=11 Score=29.20 Aligned_cols=46 Identities=15% Similarity=0.181 Sum_probs=32.5
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCC-CcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQ-DSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~-~~~~~~~~i~~-~~~~~PilGI 48 (174)
+.+..+.+.+..++||||-| |.|+.. ....+.+.+.+ ..+ +||.=+
T Consensus 212 ~~~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~~~~l~~a~~~-i~VV~~ 260 (328)
T 1wls_A 212 SGDIVREALRLGYKGIILEGYGVGGIPYRGTDLFEVVSSISKR-IPVVLT 260 (328)
T ss_dssp CTHHHHHHHHTTCSEEEEEESSSCCCCCSSSSHHHHHHHHTTT-SCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeeCCCCCCCCcHHHHHHHHHHhcC-CeEEEe
Confidence 45667777766799999998 888765 33556677765 566 888644
No 83
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=64.07 E-value=6.5 Score=30.42 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=31.0
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+.+.++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 224 ~~~~l~~~~~~g~~GiVl~~~G~Gn~p--~~~~~~l~~a~~~gi~VV~~ 270 (326)
T 1nns_A 224 SDLPAKALVDAGYDGIVSAGVGNGNLY--KSVFDTLATAAKTGTAVVRS 270 (326)
T ss_dssp CSHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCEEEEE
Confidence 45566777666799999998 777765 455565654 5667888643
No 84
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=64.06 E-value=6.4 Score=30.48 Aligned_cols=45 Identities=11% Similarity=0.175 Sum_probs=30.8
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+.+.++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 228 ~~~~l~~~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~gi~VV~~ 274 (330)
T 1wsa_A 228 TDVLVNAALQAGAKGIIHAGMGNGNPF--PLTQNALEKAAKSGVVVARS 274 (330)
T ss_dssp CSHHHHHHHHTTCSEEEEEEBTTTBCC--HHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCEEEEE
Confidence 45566777666799999988 777765 455565654 5667887643
No 85
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=63.40 E-value=4.9 Score=25.97 Aligned_cols=36 Identities=17% Similarity=0.196 Sum_probs=22.7
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
..|.+|+.-|..+.+...--.+.-.+...++|++||
T Consensus 38 ~~~~vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV 73 (111)
T 1eiw_A 38 DADAVIVLAGLWGTRRDEILGAVDLARKSSKPIITV 73 (111)
T ss_dssp SCSEEEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEE
T ss_pred cCCEEEEEeCCCcCCChHHHHHHHHHHHcCCCEEEE
Confidence 468888887766544322222333356788999998
No 86
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=63.33 E-value=7.2 Score=30.30 Aligned_cols=44 Identities=11% Similarity=0.151 Sum_probs=30.5
Q ss_pred chHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 3 VNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 3 ~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
...++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 235 ~~~l~a~~~~g~~GiVle~~G~Gn~p--~~~~~~l~~a~~~Gi~VV~~ 280 (334)
T 3nxk_A 235 GVAAKALFEHGTKGIVVAGSGAGSIH--KNQKDVLKELLKKGLKVVVS 280 (334)
T ss_dssp HHHHHHHHHTTCCEEEEEEBTTTBCC--HHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHhCCCCEEEEeeECCCCCc--HHHHHHHHHHHHCCCEEEEe
Confidence 3455666666799999988 777655 355666665 6778988754
No 87
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=62.89 E-value=5 Score=31.63 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=25.6
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhH
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGL 52 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~ 52 (174)
++|.||..||-|. ++...+. ....+|||||-+|.
T Consensus 108 ~~DlvI~lGGDGT------~L~aa~~~~~~~~PvlGiN~G~ 142 (365)
T 3pfn_A 108 QIDFIICLGGDGT------LLYASSLFQGSVPPVMAFHLGS 142 (365)
T ss_dssp TCSEEEEESSTTH------HHHHHHHCSSSCCCEEEEESSS
T ss_pred CCCEEEEEcChHH------HHHHHHHhccCCCCEEEEcCCC
Confidence 5899999999774 4455554 34679999999884
No 88
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=61.61 E-value=1.4 Score=35.51 Aligned_cols=54 Identities=13% Similarity=0.144 Sum_probs=37.8
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee-------------hHhHHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV-------------CMGLQCIGEA 58 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI-------------C~G~Qll~~~ 58 (174)
..+.+.+++.|++|+-||.++..-...+.+...+.+.++|+.|| |.||...+..
T Consensus 96 ~~~~l~~~~Id~Lv~IGGdgS~~~A~~L~~~~~~~g~~i~vIGiPkTIDNDl~~tD~t~GFdTA~~~ 162 (419)
T 3hno_A 96 LIEVFKAHDIGYFFYNGGGDSADTCLKVSQLSGTLGYPIQAIHVPKTVDNDLPITDCCPGFGSVAKY 162 (419)
T ss_dssp HHHHHHHTTEEEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEECCTTCCCSSSSSCTTHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHHhCCCccEEEecccccCCCcCCCCCCCchHHHHH
Confidence 34567778999999999987754444443333344556888887 9999987643
No 89
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=61.52 E-value=8.3 Score=29.98 Aligned_cols=45 Identities=4% Similarity=0.107 Sum_probs=30.9
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+...++.+.+.+++||||-| |.|+... .+.+.+.+ ..+++||.=+
T Consensus 234 ~~~~l~~~~~~g~~GiVle~~G~Gn~p~--~~~~~l~~a~~~Gi~VV~~ 280 (337)
T 4pga_A 234 TDTAYKALAQNGAKALIHAGTGNGSVSS--RVVPALQQLRKNGTQIIRS 280 (337)
T ss_dssp CSHHHHHHHHTTCSEEEEEEBTTTBCCT--TTHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhcCCCEEEEEEeCCCCCCH--HHHHHHHHHHHCCCEEEEe
Confidence 45566777667799999998 7777553 45555554 5567887644
No 90
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=59.41 E-value=9.8 Score=30.74 Aligned_cols=45 Identities=16% Similarity=0.192 Sum_probs=31.3
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+...++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 317 ~~~~l~a~~~~g~~GiVleg~G~Gn~p--~~~~~~l~~a~~~Gi~VV~~ 363 (438)
T 1zq1_A 317 SSEIIDFLVDKGYKGIVIEGTGLGHTP--NDIIPSIERAVEEGVAVCMT 363 (438)
T ss_dssp CTHHHHHHHHTTCSEEEEEEBTTTBCC--GGGHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCC--HHHHHHHHHHHHCCCEEEEe
Confidence 45567777766799999998 777765 555566654 5667887643
No 91
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=59.29 E-value=10 Score=30.65 Aligned_cols=45 Identities=20% Similarity=0.178 Sum_probs=31.2
Q ss_pred CchHHHHHHhcCCCEEEeCC-CCCCCCCcchhHHHHHH-cCCCCcEEee
Q 030626 2 SVNYLVSYCRKNPRGVLISP-GPGAPQDSGISLQTVLE-LGPTVPLFGV 48 (174)
Q Consensus 2 ~~~~~~~~~~~~~dgiii~G-G~~~~~~~~~~~~~i~~-~~~~~PilGI 48 (174)
+...++.+.+..++||||-| |.|+.. ..+.+.+.+ ..+++||.=+
T Consensus 314 ~~~~l~a~~~~g~~GiVleg~G~Gn~p--~~~~~~l~~a~~~Gi~VV~~ 360 (435)
T 2d6f_A 314 SPDIIKWHLDEGYRGIVIEGTGLGHCP--DTLIPVIGEAHDMGVPVAMT 360 (435)
T ss_dssp CHHHHHHHHHTTCSEEEEEEBTTTBCC--GGGHHHHHHHHHTTCCEEEE
T ss_pred CHHHHHHHHhCCCCEEEEecCCCCCcC--HHHHHHHHHHHhCCCEEEEe
Confidence 44566677666799999998 777765 555566654 5677888643
No 92
>1t0b_A THUA-like protein; trehalose metabolism, NCS symmetry, structural genomics, PSI, protein structure initiative; 1.70A {Geobacillus stearothermophilus} SCOP: c.23.16.6
Probab=55.43 E-value=59 Score=23.86 Aligned_cols=82 Identities=6% Similarity=-0.027 Sum_probs=45.0
Q ss_pred CCCEEEeCCC-CCCCCCcchhHHHHHH-cCCCCcEEeehHhH--HHHHHHhCCeeccCCCcccccccceeEeccCCCCCc
Q 030626 13 NPRGVLISPG-PGAPQDSGISLQTVLE-LGPTVPLFGVCMGL--QCIGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGL 88 (174)
Q Consensus 13 ~~dgiii~GG-~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~--Qll~~~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~l 88 (174)
++|.||+.|. .+.. -.....+.+.+ +.++..++||=.|+ +-....+|+... .+.. ..+....+.+ ...++++
T Consensus 67 ~~DvvV~~~~~~~~~-l~~~~~~al~~~V~~GgG~vgiH~a~~~~~y~~llGg~f~-~~~~-~~~~~~~v~v-~~~~HPi 142 (252)
T 1t0b_A 67 RCDVLVWWGHIAHDE-VKDEVVERVHRRVLEGMGLIVLHSGHFSKIFKKLMGTTCN-LKWR-EADEKERLWV-VAPGHPI 142 (252)
T ss_dssp TCSEEEEECSSCGGG-SCHHHHHHHHHHHHTTCEEEEEGGGGGSHHHHHHHCSCCC-CEEE-EEEEEEEEEE-SCTTSGG
T ss_pred cCCEEEEecCCCCCc-CCHHHHHHHHHHHHcCCCEEEEcccCCcHHHHhhhCCccc-CCCc-cCCceEEEEE-CCCCChh
Confidence 6899998432 1111 12233344554 67889999996663 334566777632 1100 0112122222 3458999
Q ss_pred ccCCCCceee
Q 030626 89 LAGLSNPFTA 98 (174)
Q Consensus 89 ~~~~~~~~~~ 98 (174)
.++++..+.+
T Consensus 143 t~gl~~~f~~ 152 (252)
T 1t0b_A 143 VEGIGPYIEL 152 (252)
T ss_dssp GTTCCSEEEE
T ss_pred hcCCCCCcEe
Confidence 9999866544
No 93
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=53.33 E-value=4.7 Score=29.28 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=29.7
Q ss_pred CCCEEEeCCCCCCCCCc--chhHHHHHHcCCCCcEEeehHhHHHHHH
Q 030626 13 NPRGVLISPGPGAPQDS--GISLQTVLELGPTVPLFGVCMGLQCIGE 57 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~--~~~~~~i~~~~~~~PilGIC~G~Qll~~ 57 (174)
+.|+|.++-|||++.-. +.....-.....++|++||+- ++.++.
T Consensus 66 dld~Iav~~GPGsfTGlRiG~~~Ak~La~~~~iPl~gVs~-l~a~a~ 111 (218)
T 2a6a_A 66 DLDVVGVGIGPGGLTGLRVGIATVVGLVSPYDIPVAPLNS-FEMTAK 111 (218)
T ss_dssp GCSEEEEECCSSCHHHHHHHHHHHHHHHGGGTCCEEEECH-HHHHHH
T ss_pred HCCEEEEEcCCCchHhHHHHHHHHHHHHHHcCCCEEEeCc-HHHHHh
Confidence 57999999999986532 122222334556799999995 555554
No 94
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=52.97 E-value=5.5 Score=29.92 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=24.5
Q ss_pred cCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHhH
Q 030626 12 KNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMGL 52 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G~ 52 (174)
.++|.||..||-|. +++.++. ...++|+|||=.|.
T Consensus 62 ~~~D~vi~~GGDGT------~l~a~~~~~~~~~P~lGI~~Gt 97 (292)
T 2an1_A 62 QQADLAVVVGGDGN------MLGAARTLARYDINVIGINRGN 97 (292)
T ss_dssp HHCSEEEECSCHHH------HHHHHHHHTTSSCEEEEBCSSS
T ss_pred cCCCEEEEEcCcHH------HHHHHHHhhcCCCCEEEEECCC
Confidence 35899999999764 3444444 34569999997653
No 95
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=51.10 E-value=3.7 Score=30.47 Aligned_cols=35 Identities=17% Similarity=0.314 Sum_probs=24.4
Q ss_pred cCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhH
Q 030626 12 KNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGL 52 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~ 52 (174)
.++|.||..||-|. +++..+.+..++|+|||=.|.
T Consensus 40 ~~~D~vv~~GGDGT------ll~~a~~~~~~~PilGIn~G~ 74 (258)
T 1yt5_A 40 VTADLIVVVGGDGT------VLKAAKKAADGTPMVGFKAGR 74 (258)
T ss_dssp BCCSEEEEEECHHH------HHHHHTTBCTTCEEEEEESSS
T ss_pred CCCCEEEEEeCcHH------HHHHHHHhCCCCCEEEEECCC
Confidence 36899999999664 344454432289999998773
No 96
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=50.87 E-value=3.2 Score=31.43 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=23.1
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhH
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGL 52 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~ 52 (174)
++|.||..||-|. ++...+.....+|++||-.|.
T Consensus 68 ~~DlvIvlGGDGT------~L~aa~~~~~~~PilGIN~G~ 101 (278)
T 1z0s_A 68 NFDFIVSVGGDGT------ILRILQKLKRCPPIFGINTGR 101 (278)
T ss_dssp GSSEEEEEECHHH------HHHHHTTCSSCCCEEEEECSS
T ss_pred CCCEEEEECCCHH------HHHHHHHhCCCCcEEEECCCC
Confidence 5688888888663 344444433229999998873
No 97
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=50.63 E-value=3.7 Score=30.76 Aligned_cols=34 Identities=21% Similarity=0.371 Sum_probs=23.6
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcC---CCCcEEeehHhH
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELG---PTVPLFGVCMGL 52 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~---~~~PilGIC~G~ 52 (174)
++|.||..||-|. ++...+.+. .++|+|||=.|.
T Consensus 35 ~~D~vv~lGGDGT------~l~aa~~~~~~~~~~PilGIn~G~ 71 (272)
T 2i2c_A 35 EPEIVISIGGDGT------FLSAFHQYEERLDEIAFIGIHTGH 71 (272)
T ss_dssp SCSEEEEEESHHH------HHHHHHHTGGGTTTCEEEEEESSS
T ss_pred CCCEEEEEcCcHH------HHHHHHHHhhcCCCCCEEEEeCCC
Confidence 4789999999664 344444432 379999997763
No 98
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=50.04 E-value=3.7 Score=35.60 Aligned_cols=55 Identities=13% Similarity=0.125 Sum_probs=37.6
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcC-CCCcEEee-------------hHhHHHHHHHh
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELG-PTVPLFGV-------------CMGLQCIGEAF 59 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~-~~~PilGI-------------C~G~Qll~~~~ 59 (174)
..+.+.+++.|++|+.||.++......+.+...... .++|+.|| |+||...+...
T Consensus 481 ~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiPkTIDNDl~gTD~TiGfdTA~~~~ 549 (762)
T 3o8l_A 481 ISANITKFNIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIPATVSNNVPGSDFSVGADTALNTI 549 (762)
T ss_dssp HHHHHHHTTCCCEEEEESHHHHHHHHHHHHHHHHCSTTCSCEEEEEBCTTCCCTTCSCCBTHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhccccCCCEEeeccccCCCCCCCcCCCChHHHHHHH
Confidence 456677789999999999876544433333333332 37888887 99999886543
No 99
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=44.75 E-value=16 Score=28.15 Aligned_cols=47 Identities=17% Similarity=0.284 Sum_probs=31.8
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee-------------hHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV-------------CMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI-------------C~G~Qll~~ 57 (174)
..+.+.+++.|++++-||.++-.. ...+.+. ++|+.|| |.||...+.
T Consensus 85 ~~~~l~~~~Id~L~~IGGdgS~~~----a~~l~~~--~i~vigiPkTIDNDl~~td~t~GfdTA~~ 144 (319)
T 4a3s_A 85 GIANLKKLGIEGLVVIGGDGSYMG----AKKLTEH--GFPCVGVPGTIDNDIPGTDFTIGFDTALN 144 (319)
T ss_dssp HHHHHHHHTCCEEEEEECTTHHHH----HHHHHHT--TCCEEEEEEETTCCCTTCSCCEEHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCcHHHHH----HHHHhcc--CCcEEEeeccccCCCCCCCCCCCHHHHHH
Confidence 456677789999999999876321 1222232 4666664 999988765
No 100
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=43.40 E-value=37 Score=25.74 Aligned_cols=46 Identities=11% Similarity=-0.010 Sum_probs=31.1
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC 49 (174)
.-.+.+.++.+|-|+-+||..+..+.-..++.+.+ .+.+++|+..|
T Consensus 170 ~Ale~Li~lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGG 216 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGG 216 (287)
T ss_dssp HHHHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECT
T ss_pred HHHHHHHHcCCCEEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECC
Confidence 44667777799999999986665444444555443 55678887754
No 101
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=43.38 E-value=3.9 Score=31.61 Aligned_cols=47 Identities=11% Similarity=0.115 Sum_probs=30.5
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEe-------------ehHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFG-------------VCMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilG-------------IC~G~Qll~~ 57 (174)
..+.+.+++.|++|+-||.++..... .+.+. ++|+.| .|+||...+.
T Consensus 85 ~~~~l~~~~Id~LvvIGGdgS~~~a~----~L~~~--~i~vvgiPkTIDNDl~~td~t~GfdTA~~ 144 (319)
T 1zxx_A 85 GIEQLKKHGIDAVVVIGGDGSYHGAL----QLTRH--GFNSIGLPGTIDNDIPYTDATIGYDTACM 144 (319)
T ss_dssp HHHHHHHTTCCEEEEEECHHHHHHHH----HHHHT--TCCEEEEEEETTCCCTTCSCCEEHHHHHH
T ss_pred HHHHHHHhCCCEEEEECCchHHHHHH----HHHHh--CCCEEEEeecccCCCCCCcCCCCHHHHHH
Confidence 34557778999999999977633222 22222 467766 4899887654
No 102
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=41.78 E-value=7.3 Score=30.94 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=24.6
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHc-CCCC-cEEeehHhH
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLEL-GPTV-PLFGVCMGL 52 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~-~~~~-PilGIC~G~ 52 (174)
++|.||..||-|. ++...+.+ ..++ |+|||-.|.
T Consensus 114 ~~DlVIvlGGDGT------lL~aa~~~~~~~vpPiLGIN~G~ 149 (388)
T 3afo_A 114 RTDLLVTLGGDGT------ILHGVSMFGNTQVPPVLAFALGT 149 (388)
T ss_dssp HCSEEEEEESHHH------HHHHHHTTTTSCCCCEEEEECSS
T ss_pred CCCEEEEEeCcHH------HHHHHHHhcccCCCeEEEEECCC
Confidence 5799999999664 44555554 3467 899998873
No 103
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=40.58 E-value=4.6 Score=31.23 Aligned_cols=47 Identities=13% Similarity=0.263 Sum_probs=31.0
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee-------------hHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV-------------CMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI-------------C~G~Qll~~ 57 (174)
..+.+.+++.|++|+-||.++.... ..+.+. ++|+.|| |+||...+.
T Consensus 86 ~~~~l~~~~Id~LvvIGGdgS~~~a----~~L~~~--~i~vvgiPkTIDNDl~~td~t~GfdTA~~ 145 (320)
T 1pfk_A 86 AIENLKKRGIDALVVIGGDGSYMGA----MRLTEM--GFPCIGLPGTIDNDIKGTDYTIGFFTALS 145 (320)
T ss_dssp HHHHHHHTTCCEEEEEECHHHHHHH----HHHHHT--TCCEEEEEBCTTCCCTTCSCCBTHHHHHH
T ss_pred HHHHHHHcCCCEEEEECCCchHHHH----HHHHhh--CCCEEEEeccccCCCCCCcCCCCHHHHHH
Confidence 3455777899999999997763222 222222 5777775 999988654
No 104
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=36.51 E-value=7.9 Score=27.99 Aligned_cols=43 Identities=26% Similarity=0.555 Sum_probs=27.3
Q ss_pred CCCEEEeCCCCCCCCCc--chhHHHHHHcCCCCcEEeehHhHHHHH
Q 030626 13 NPRGVLISPGPGAPQDS--GISLQTVLELGPTVPLFGVCMGLQCIG 56 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~--~~~~~~i~~~~~~~PilGIC~G~Qll~ 56 (174)
+.|+|.++-|||+..-. +.....-.....++|++||+- ++.++
T Consensus 56 dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVst-L~a~a 100 (213)
T 3r6m_A 56 DLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVST-LAAMA 100 (213)
T ss_dssp TCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEH-HHHHH
T ss_pred HccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcC-HHHHH
Confidence 58999999999987421 111222233456799999984 33443
No 105
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=36.36 E-value=81 Score=22.63 Aligned_cols=44 Identities=14% Similarity=0.120 Sum_probs=24.2
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCC-CcchhHHHHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQ-DSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~-~~~~~~~~i~~~~~~~PilGIC 49 (174)
+..+.+...++||||+.+...+.. .....++.+.+ .++|+.-+.
T Consensus 62 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~--~~iPvV~~~ 106 (298)
T 3tb6_A 62 RGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEK--NGIPFAMIN 106 (298)
T ss_dssp HHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHH--TTCCEEEES
T ss_pred HHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHh--cCCCEEEEe
Confidence 345666677899999987644322 12223333333 346665543
No 106
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=36.21 E-value=5.2 Score=30.47 Aligned_cols=34 Identities=26% Similarity=0.429 Sum_probs=21.8
Q ss_pred cCCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeehHh
Q 030626 12 KNPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVCMG 51 (174)
Q Consensus 12 ~~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC~G 51 (174)
.++|.||..||-|. +++.++. ...++|+|||=.|
T Consensus 74 ~~~d~vi~~GGDGT------~l~a~~~~~~~~~pvlgi~~G 108 (307)
T 1u0t_A 74 DGCELVLVLGGDGT------FLRAAELARNASIPVLGVNLG 108 (307)
T ss_dssp --CCCEEEEECHHH------HHHHHHHHHHHTCCEEEEECS
T ss_pred cCCCEEEEEeCCHH------HHHHHHHhccCCCCEEEEeCC
Confidence 36899999999664 3333333 2235899999766
No 107
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=35.99 E-value=36 Score=24.88 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=18.4
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHH-cCCCCcEEeeh
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLE-LGPTVPLFGVC 49 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~-~~~~~PilGIC 49 (174)
-||.||+.. +..+. ..+.+ ..-++|+.|+|
T Consensus 157 ~Pdll~v~D----p~~e~---~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 157 LPDIVIIVD----QQEEY---TALRECITLGIPTICLI 187 (231)
T ss_dssp CCSEEEESC----TTTTH---HHHHHHHTTTCCEEECC
T ss_pred CCCEEEEeC----Ccccc---HHHHHHHHhCCCEEEEe
Confidence 488888762 22222 23333 45579999999
No 108
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=35.86 E-value=76 Score=23.01 Aligned_cols=21 Identities=0% Similarity=0.026 Sum_probs=15.4
Q ss_pred hHHHHHHhcCCCEEEeCCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGPG 24 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~ 24 (174)
.+.+.+...++||||+.+...
T Consensus 56 ~~~~~l~~~~vdGiIi~~~~~ 76 (294)
T 3qk7_A 56 SLIHLVETRRVDALIVAHTQP 76 (294)
T ss_dssp HHHHHHHHTCCSEEEECSCCS
T ss_pred HHHHHHHcCCCCEEEEeCCCC
Confidence 455666667899999987643
No 109
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=34.91 E-value=46 Score=23.91 Aligned_cols=31 Identities=16% Similarity=0.444 Sum_probs=17.3
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
.||.||+.. +..+...+++.. .-++|+.|+|
T Consensus 115 ~PdlliV~D----p~~e~~ai~EA~--~l~IPvIalv 145 (208)
T 1vi6_A 115 EPEVVFVND----PAIDKQAVSEAT--AVGIPVVALC 145 (208)
T ss_dssp CCSEEEESC----TTTTHHHHHHHH--HTTCCEEEEE
T ss_pred CCCEEEEEC----CCcchhHHHHHH--HhCCCEEEEe
Confidence 367777652 222222233333 3469999999
No 110
>2nrr_A Uvrabc system protein C; UVRC, endonuclase, NER, hydrolase; 1.20A {Thermotoga maritima}
Probab=34.75 E-value=21 Score=24.61 Aligned_cols=35 Identities=20% Similarity=0.501 Sum_probs=22.9
Q ss_pred CCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHh
Q 030626 14 PRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMG 51 (174)
Q Consensus 14 ~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G 51 (174)
||.|+|=||.|.... ..+.+.+++-.+|+.|+-=|
T Consensus 80 PDLilIDGGkgQl~a---A~~vl~elg~~i~v~glAK~ 114 (159)
T 2nrr_A 80 PNLLFVDGGIGQVNA---AIEALKEIGKDCPVVGLAKK 114 (159)
T ss_dssp CSEEEESSCHHHHHH---HHHHHHHTTCCCCEEEEC--
T ss_pred CCEEEEeCCHHHHHH---HHHHHHHcCCCccEEEEEcC
Confidence 899999999775332 22333455667999998766
No 111
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=34.35 E-value=86 Score=22.57 Aligned_cols=39 Identities=18% Similarity=0.142 Sum_probs=22.8
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
++.+.+...++||||+.+...+ ...++.+.+ .++|+.-+
T Consensus 55 ~~~~~l~~~~vdgiIi~~~~~~----~~~~~~l~~--~~iPvV~~ 93 (287)
T 3bbl_A 55 IYRDLIRSGNVDGFVLSSINYN----DPRVQFLLK--QKFPFVAF 93 (287)
T ss_dssp HHHHHHHTTCCSEEEECSCCTT----CHHHHHHHH--TTCCEEEE
T ss_pred HHHHHHHcCCCCEEEEeecCCC----cHHHHHHHh--cCCCEEEE
Confidence 4566777778999999865332 123333332 34666554
No 112
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=34.29 E-value=17 Score=26.43 Aligned_cols=43 Identities=23% Similarity=0.391 Sum_probs=27.6
Q ss_pred CCCEEEeCCCCCCCCCcc--hhHHHHHHcCCCCcEEeehHhHHHH
Q 030626 13 NPRGVLISPGPGAPQDSG--ISLQTVLELGPTVPLFGVCMGLQCI 55 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~--~~~~~i~~~~~~~PilGIC~G~Qll 55 (174)
+.|+|.++=|||+..-.. .....-.....++|++||+--.-+.
T Consensus 55 did~Iav~~GPGsftglRig~~~ak~la~~~~~Pl~~V~~l~a~a 99 (231)
T 2gel_A 55 EIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMA 99 (231)
T ss_dssp GCSEEEEECCSSCHHHHHHHHHHHHHHHHTTTCCEEEECHHHHHH
T ss_pred HCCEEEEEcCCChhHhHHHHHHHHHHHHHHcCCCEEEeccHHHHH
Confidence 479999999999874211 1112222356789999999644443
No 113
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.71 E-value=48 Score=23.69 Aligned_cols=31 Identities=13% Similarity=0.519 Sum_probs=16.9
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
-||.||+. ++..+...+++...+ ++|+.|+|
T Consensus 111 ~Pdllvv~----Dp~~d~~ai~EA~~l--~IP~Ial~ 141 (202)
T 3j20_B 111 EPDVLIVT----DPRADHQAMREAVEI--GIPIVALV 141 (202)
T ss_dssp CCSEEEES----CTTTSHHHHHHHHHH--TCCEEEEE
T ss_pred CCCeEEEe----CCccchHHHHHHHHc--CCCEEEEE
Confidence 36667665 222222223333334 59999999
No 114
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=33.65 E-value=60 Score=23.27 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=23.3
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
++.+.+...++||||+.+... ...++.+. ..++|+.-+.
T Consensus 54 ~~~~~l~~~~vdgiIi~~~~~-----~~~~~~l~--~~~iPvV~i~ 92 (276)
T 3jy6_A 54 TLLRAIGSRGFDGLILQSFSN-----PQTVQEIL--HQQMPVVSVD 92 (276)
T ss_dssp HHHHHHHTTTCSEEEEESSCC-----HHHHHHHH--TTSSCEEEES
T ss_pred HHHHHHHhCCCCEEEEecCCc-----HHHHHHHH--HCCCCEEEEe
Confidence 355666677899999987543 22333332 3457766554
No 115
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=32.69 E-value=1.4e+02 Score=21.67 Aligned_cols=48 Identities=15% Similarity=0.173 Sum_probs=28.1
Q ss_pred HhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHHHHHHhCCeec
Q 030626 10 CRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEAFGGKIV 64 (174)
Q Consensus 10 ~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Qll~~~~gg~v~ 64 (174)
.+.++|+|||.-...+ . ++.+++.- .+||+||.--.-..+...|+++.
T Consensus 66 ~~~g~d~iviaCnt~~-----~-l~~lr~~~-~iPvigi~e~~~~~a~~~~~rig 113 (245)
T 3qvl_A 66 REQGVDGHVIASFGDP-----G-LLAARELA-QGPVIGIAEAAMHMATMVATRFS 113 (245)
T ss_dssp HHHTCSEEEEC-CCCT-----T-HHHHHHHC-SSCEEEHHHHHHHHHHHHCSCEE
T ss_pred HHCCCCEEEEeCCChh-----H-HHHHHHHc-CCCEECccHHHHHHHHHcCCEEE
Confidence 3458999999754222 1 25555532 59999997544444444565443
No 116
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=32.63 E-value=78 Score=23.06 Aligned_cols=40 Identities=25% Similarity=0.230 Sum_probs=23.9
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
++.+.+...++||||+.+...+ + ...++.+.+ ++|+.-+.
T Consensus 62 ~~~~~l~~~~vdgiI~~~~~~~--~-~~~~~~l~~---~iPvV~i~ 101 (303)
T 3kke_A 62 QLSRLVSEGRVDGVLLQRREDF--D-DDMLAAVLE---GVPAVTIN 101 (303)
T ss_dssp HHHHHHHSCSSSEEEECCCTTC--C-HHHHHHHHT---TSCEEEES
T ss_pred HHHHHHHhCCCcEEEEecCCCC--c-HHHHHHHhC---CCCEEEEC
Confidence 3556666778999999876433 1 113333333 68877654
No 117
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=32.10 E-value=94 Score=22.26 Aligned_cols=19 Identities=5% Similarity=0.046 Sum_probs=13.9
Q ss_pred HHHHHHhcCCCEEEeCCCC
Q 030626 5 YLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~ 23 (174)
..+.+...++||||+.+..
T Consensus 61 ~~~~~~~~~vdgiIi~~~~ 79 (292)
T 3k4h_A 61 VVKMVQGRQIGGIILLYSR 79 (292)
T ss_dssp HHHHHHTTCCCEEEESCCB
T ss_pred HHHHHHcCCCCEEEEeCCC
Confidence 4555666789999998754
No 118
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=31.75 E-value=85 Score=22.64 Aligned_cols=39 Identities=8% Similarity=-0.032 Sum_probs=23.2
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
+.+.+...++||||+.+...+ ...++.+.+ .++|+.-+.
T Consensus 59 ~~~~l~~~~vdgiIi~~~~~~----~~~~~~l~~--~~iPvV~~~ 97 (290)
T 2rgy_A 59 AVRFLIGRDCDGVVVISHDLH----DEDLDELHR--MHPKMVFLN 97 (290)
T ss_dssp HHHHHHHTTCSEEEECCSSSC----HHHHHHHHH--HCSSEEEES
T ss_pred HHHHHHhcCccEEEEecCCCC----HHHHHHHhh--cCCCEEEEc
Confidence 566666678999999875332 223333333 357776553
No 119
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=31.35 E-value=59 Score=26.24 Aligned_cols=51 Identities=12% Similarity=0.204 Sum_probs=31.5
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHHHHHH
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCIGEA 58 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Qll~~~ 58 (174)
+..+++.+..+|+++|- ..+|- +..-..+++...+..++|+|-+.+-+...
T Consensus 128 ~i~~~i~~~~p~a~~i~--~tNPv--di~t~~~~k~~p~~rviG~C~~~~~~~~~ 178 (450)
T 3fef_A 128 EIARAIRDYAPESWVIN--YTNPM--SVCTRVLYKVFPGIKAIGCCHEVFGTQKL 178 (450)
T ss_dssp HHHHHHHHHCTTSEEEE--CCSSH--HHHHHHHHHHCTTCEEEECCSHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEE--ecCch--HHHHHHHHHHCCCCCEEEeCCcHHHHHHH
Confidence 34567777788998874 22222 22223344435678999999997766443
No 120
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=31.29 E-value=1.1e+02 Score=22.20 Aligned_cols=20 Identities=0% Similarity=-0.099 Sum_probs=14.7
Q ss_pred hHHHHHHhcCCCEEEeCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~ 23 (174)
++.+.+...++||||+.+..
T Consensus 59 ~~~~~l~~~~vdGiI~~~~~ 78 (295)
T 3hcw_A 59 EVYKMIKQRMVDAFILLYSK 78 (295)
T ss_dssp HHHHHHHTTCCSEEEESCCC
T ss_pred HHHHHHHhCCcCEEEEcCcc
Confidence 34566667789999998653
No 121
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=31.05 E-value=94 Score=22.59 Aligned_cols=20 Identities=10% Similarity=0.006 Sum_probs=14.7
Q ss_pred hHHHHHHhcCCCEEEeCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~ 23 (174)
++.+.+...++||||+.+..
T Consensus 74 ~~~~~l~~~~vdgiIi~~~~ 93 (305)
T 3huu_A 74 EVKTMIQSKSVDGFILLYSL 93 (305)
T ss_dssp HHHHHHHTTCCSEEEESSCB
T ss_pred HHHHHHHhCCCCEEEEeCCc
Confidence 34556666789999998754
No 122
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=30.89 E-value=94 Score=22.50 Aligned_cols=19 Identities=16% Similarity=0.280 Sum_probs=14.4
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 52 ~~i~~l~~~~vdgiii~~~ 70 (297)
T 3rot_A 52 QFIESALATYPSGIATTIP 70 (297)
T ss_dssp HHHHHHHHTCCSEEEECCC
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 4566677778999999764
No 123
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=30.87 E-value=1.4e+02 Score=21.04 Aligned_cols=40 Identities=18% Similarity=0.270 Sum_probs=25.1
Q ss_pred HHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehH-hHHH
Q 030626 8 SYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCM-GLQC 54 (174)
Q Consensus 8 ~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~-G~Ql 54 (174)
.+.+.++|+|+++--.. ...+.+++.- ++|++||.- +.+.
T Consensus 70 ~l~~~g~d~iviaCnta------~~~~~l~~~~-~iPvi~i~~~~~~~ 110 (228)
T 2eq5_A 70 EFEREGVDAIIISCAAD------PAVEKVRKLL-SIPVIGAGSSVSAL 110 (228)
T ss_dssp HHHHTTCSEEEECSTTC------TTHHHHHHHC-SSCEEEHHHHHHHH
T ss_pred HHHHCCCCEEEEeCCch------HHHHHHHHhC-CCCEeCccHHHHHH
Confidence 44456899999876322 3345555532 599999865 4444
No 124
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=30.62 E-value=30 Score=25.70 Aligned_cols=58 Identities=19% Similarity=0.160 Sum_probs=32.6
Q ss_pred HHHHhcCCCEEEeCCCCCCCCCcchhHHHHHH---cCCCCcEEeehHhH-----HHHHHHhCCeec
Q 030626 7 VSYCRKNPRGVLISPGPGAPQDSGISLQTVLE---LGPTVPLFGVCMGL-----QCIGEAFGGKIV 64 (174)
Q Consensus 7 ~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~---~~~~~PilGIC~G~-----Qll~~~~gg~v~ 64 (174)
++...+.+|.+=|..-+-+..|.-.+++...+ ...+.|+.++|+|- .+++..||..++
T Consensus 166 ~~~~~~GaDIvKia~~a~s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG~~G~~SRi~~~~~GS~lT 231 (259)
T 3l9c_A 166 SELTALAPRVVKIAVMPKNEQDVLDLMNYTRGFKTLNPNQEYVTMSMSKLGRISRLAADLIGSSWT 231 (259)
T ss_dssp HHHHHTCCSEEEEEECCSSHHHHHHHHHHHHHHHHHCTTSEEEEEECTGGGHHHHHTHHHHTBSEE
T ss_pred HHHHHcCCCEEEEEecCCCHHHHHHHHHHHHHHHhccCCCCEEEEECCCCcccHHHHHHHhCCccc
Confidence 34444556655554444444444333333322 24679999999998 555666664443
No 125
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=30.33 E-value=1e+02 Score=20.16 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=28.5
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEe-ehHhHHHHHH
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFG-VCMGLQCIGE 57 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilG-IC~G~Qll~~ 57 (174)
.+++.+....++|+..|.. ..+..+..+ ..++.++| =|.|.+.-..
T Consensus 87 ~~~~~~~gi~~i~~~~g~~----~~~~~~~a~--~~Gir~vgpnc~g~~~~~~ 133 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQSGIR----HPEFEKALK--EAGIPVVADRCLMVEHKRL 133 (140)
T ss_dssp HHHHHHHCCSCEEECTTCC----CHHHHHHHH--HTTCCEEESCCHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCcC----HHHHHHHHH--HcCCEEEcCCccceEChhh
Confidence 4555556677788776543 222223333 34689999 9999887554
No 126
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=29.96 E-value=61 Score=24.08 Aligned_cols=11 Identities=18% Similarity=0.471 Sum_probs=8.7
Q ss_pred cCCCCcEEeeh
Q 030626 39 LGPTVPLFGVC 49 (174)
Q Consensus 39 ~~~~~PilGIC 49 (174)
..-++|++|||
T Consensus 171 ~~lgIPvIalv 181 (253)
T 3bch_A 171 SYVNLPTIALC 181 (253)
T ss_dssp HHTTCCEEEEE
T ss_pred HHhCCCEEEEE
Confidence 34469999999
No 127
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=29.81 E-value=1e+02 Score=22.24 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=14.2
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
++.+.+...++||||+.+.
T Consensus 63 ~~~~~l~~~~vdgiIi~~~ 81 (289)
T 2fep_A 63 HLLNTMLGKQVDGIVFMGG 81 (289)
T ss_dssp HHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHhCCCCEEEEecC
Confidence 3456666678999999875
No 128
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=29.67 E-value=98 Score=21.85 Aligned_cols=18 Identities=17% Similarity=0.408 Sum_probs=13.3
Q ss_pred HHHHHHhcC-CCEEEeCCC
Q 030626 5 YLVSYCRKN-PRGVLISPG 22 (174)
Q Consensus 5 ~~~~~~~~~-~dgiii~GG 22 (174)
..+.+...+ +||||+.+.
T Consensus 50 ~i~~l~~~~~vdgii~~~~ 68 (276)
T 3ksm_A 50 ILSYHLSQAPPDALILAPN 68 (276)
T ss_dssp HHHHHHHHSCCSEEEECCS
T ss_pred HHHHHHHhCCCCEEEEeCC
Confidence 455666667 999999864
No 129
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=29.52 E-value=1.1e+02 Score=21.49 Aligned_cols=20 Identities=0% Similarity=0.036 Sum_probs=14.7
Q ss_pred hHHHHHHhcCCCEEEeCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~ 23 (174)
+..+.+...++||||+.+..
T Consensus 49 ~~~~~l~~~~vdgiIi~~~~ 68 (272)
T 3o74_A 49 QLQQLFRARRCDALFVASCL 68 (272)
T ss_dssp HHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEEecCc
Confidence 34566666789999998754
No 130
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=29.45 E-value=97 Score=22.21 Aligned_cols=41 Identities=10% Similarity=0.312 Sum_probs=22.6
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
+..+.+...++||||+.+... ......++.+.+ .++|++-+
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~~--~~~~~~~~~~~~--~~iPvV~~ 95 (293)
T 3l6u_A 55 EQILEFVHLKVDAIFITTLDD--VYIGSAIEEAKK--AGIPVFAI 95 (293)
T ss_dssp HHHHHHHHTTCSEEEEECSCT--TTTHHHHHHHHH--TTCCEEEE
T ss_pred HHHHHHHHcCCCEEEEecCCh--HHHHHHHHHHHH--cCCCEEEe
Confidence 455666667899999976432 222233333333 34666554
No 131
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=29.24 E-value=1e+02 Score=22.34 Aligned_cols=20 Identities=35% Similarity=0.361 Sum_probs=14.5
Q ss_pred hHHHHHHhcCCCEEEeCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~ 23 (174)
+..+.+...++||||+.+..
T Consensus 52 ~~i~~l~~~~vdgiIi~~~~ 71 (305)
T 3g1w_A 52 TVLEQAIAKNPAGIAISAID 71 (305)
T ss_dssp HHHHHHHHHCCSEEEECCSS
T ss_pred HHHHHHHHhCCCEEEEcCCC
Confidence 34566666789999998653
No 132
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=28.90 E-value=29 Score=22.77 Aligned_cols=26 Identities=27% Similarity=0.600 Sum_probs=20.2
Q ss_pred ecCCCCcCCCchHHHHHHHHHHHHHH
Q 030626 142 QFHPESIITTEGKTIVRNFIKMIVRK 167 (174)
Q Consensus 142 QfHPE~~~~~~~~~l~~~f~~~~~~~ 167 (174)
|-||+...+..+..++..|+..+..+
T Consensus 45 QVhpd~gISskAm~ImnSfvnDifer 70 (123)
T 2nqb_D 45 QVHPDTGISSKAMSIMNSFVNDIFER 70 (123)
T ss_dssp HHCTTCEECHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 88999666777888888888776543
No 133
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=28.75 E-value=1.2e+02 Score=21.79 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=13.6
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 48 ~~i~~l~~~~vdgiIi~~~ 66 (283)
T 2ioy_A 48 SNVEDLIQQKVDVLLINPV 66 (283)
T ss_dssp HHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 3455666678999999753
No 134
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=28.45 E-value=84 Score=25.59 Aligned_cols=61 Identities=13% Similarity=0.116 Sum_probs=36.9
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCc-------ch---hHHHHHH-c-CCCCcEEe---ehHhHHHH-HHHhCCeec
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDS-------GI---SLQTVLE-L-GPTVPLFG---VCMGLQCI-GEAFGGKIV 64 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~-------~~---~~~~i~~-~-~~~~PilG---IC~G~Qll-~~~~gg~v~ 64 (174)
+....+.+...|+|++.+|+|+.... .. .+..+.+ . ..++|+++ |..+-.+. +.++|+...
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V 360 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCV 360 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeE
Confidence 34455666789999999888876422 11 1222222 1 23699986 77777665 556665443
No 135
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=28.05 E-value=44 Score=27.11 Aligned_cols=54 Identities=17% Similarity=0.212 Sum_probs=30.2
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHHH---HHHhCCe
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQCI---GEAFGGK 62 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Qll---~~~~gg~ 62 (174)
+..+++.++.||+++|- ..+ ..+-.-..+++. .+++++|+|-+.|.+ +..+|..
T Consensus 141 ~i~~~i~~~~P~A~~in--~tN--P~~i~t~a~~~~-~~~k~vGlC~~~~~~~~~~~~Lg~~ 197 (477)
T 3u95_A 141 EIAEKMKKMAPKAYLMQ--TAN--PVFEITQAVRRW-TGANIIGFCHGVAGVYEVFERLGLD 197 (477)
T ss_dssp HHHHHHHHHCTTCEEEE--CSS--CHHHHHHHHHHH-HCCCEEEECCGGGHHHHHHHHTTCC
T ss_pred HHHHHHHhhCCCeEEEE--ecC--hHHHHHHHHHHh-CCCCeEEECCCHHHHHHHHHHhCCC
Confidence 34566666778887763 111 112222334443 358999999865544 4455543
No 136
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=28.02 E-value=47 Score=24.45 Aligned_cols=11 Identities=18% Similarity=0.603 Sum_probs=9.4
Q ss_pred cCCCCcEEeeh
Q 030626 39 LGPTVPLFGVC 49 (174)
Q Consensus 39 ~~~~~PilGIC 49 (174)
..-++|++|+|
T Consensus 134 ~~l~IPvIalv 144 (241)
T 2xzm_B 134 SYVNIPVIALC 144 (241)
T ss_dssp TTTTCCEEECC
T ss_pred HHhCCCEEEEe
Confidence 55679999999
No 137
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=27.53 E-value=1.1e+02 Score=24.94 Aligned_cols=61 Identities=15% Similarity=0.173 Sum_probs=38.1
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCc-------ch---hHHHHHH--cCCCCcEE---eehHhHHHH-HHHhCCeeccC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDS-------GI---SLQTVLE--LGPTVPLF---GVCMGLQCI-GEAFGGKIVRS 66 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~-------~~---~~~~i~~--~~~~~Pil---GIC~G~Qll-~~~~gg~v~~~ 66 (174)
...+.+...|+|++..|+|+.... .. .+..+.+ ...++|++ ||..+-.+. +.++|+...-.
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhee
Confidence 345556689999998888875321 11 1222222 12369999 898888887 66777655443
No 138
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=27.42 E-value=32 Score=22.67 Aligned_cols=26 Identities=27% Similarity=0.567 Sum_probs=20.4
Q ss_pred ecCCCCcCCCchHHHHHHHHHHHHHH
Q 030626 142 QFHPESIITTEGKTIVRNFIKMIVRK 167 (174)
Q Consensus 142 QfHPE~~~~~~~~~l~~~f~~~~~~~ 167 (174)
|-||+...+..+..++..|+..+..+
T Consensus 48 QVhpd~gISskAm~ImnSfvnDifer 73 (126)
T 1tzy_B 48 QVHPDTGISSKAMGIMNSFVNDIFER 73 (126)
T ss_dssp HHCTTCEECHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 88999766778888888888776543
No 139
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=27.22 E-value=63 Score=18.62 Aligned_cols=26 Identities=12% Similarity=0.309 Sum_probs=16.9
Q ss_pred eEEEecCCCCcCCCchHHHHHHHHHH
Q 030626 138 LQGVQFHPESIITTEGKTIVRNFIKM 163 (174)
Q Consensus 138 ~~g~QfHPE~~~~~~~~~l~~~f~~~ 163 (174)
-++.++||.+...+.....|+..-++
T Consensus 26 ~l~~~~HPD~~~~~~~~~~f~~i~~A 51 (77)
T 1hdj_A 26 RQALRYHPDKNKEPGAEEKFKEIAEA 51 (77)
T ss_dssp HHHHTTCTTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHCcCCCCCccHHHHHHHHHHH
Confidence 36788999986555555555554444
No 140
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=26.98 E-value=68 Score=22.07 Aligned_cols=41 Identities=10% Similarity=-0.120 Sum_probs=21.9
Q ss_pred HHhcCCCEEEeCCCCCCCC-CcchhHHHHHHcC-CCCcEEeeh
Q 030626 9 YCRKNPRGVLISPGPGAPQ-DSGISLQTVLELG-PTVPLFGVC 49 (174)
Q Consensus 9 ~~~~~~dgiii~GG~~~~~-~~~~~~~~i~~~~-~~~PilGIC 49 (174)
+...++|.||++|--.+.. ....+.+.+..+. .++|++.|.
T Consensus 28 ~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~~~pv~~v~ 70 (228)
T 1uf3_A 28 APDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVP 70 (228)
T ss_dssp HHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGCSCEEEEC
T ss_pred HhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhcCCcEEEEC
Confidence 3334799999988655433 2222222222222 247887765
No 141
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=26.61 E-value=63 Score=23.32 Aligned_cols=20 Identities=15% Similarity=0.522 Sum_probs=14.9
Q ss_pred HHHHHHhcCCCEEEeCCCCC
Q 030626 5 YLVSYCRKNPRGVLISPGPG 24 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~ 24 (174)
..+.+...++||||+.+...
T Consensus 56 ~~~~l~~~~vdgiIi~~~~~ 75 (291)
T 3egc_A 56 AVGQFFERRVDGLILAPSEG 75 (291)
T ss_dssp HHHHHHHTTCSEEEECCCSS
T ss_pred HHHHHHHCCCCEEEEeCCCC
Confidence 45666667899999987643
No 142
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=26.28 E-value=1.4e+02 Score=21.33 Aligned_cols=19 Identities=5% Similarity=0.120 Sum_probs=13.8
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 49 ~~~~~l~~~~vdgiI~~~~ 67 (290)
T 2fn9_A 49 AHFDAIIAAGYDAIIFNPT 67 (290)
T ss_dssp HHHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEEecC
Confidence 3455666678999999864
No 143
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=26.21 E-value=90 Score=22.45 Aligned_cols=18 Identities=22% Similarity=0.453 Sum_probs=13.8
Q ss_pred HHHHHHhcCCCEEEeCCC
Q 030626 5 YLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG 22 (174)
+.+.+...++||||+.+.
T Consensus 61 ~i~~l~~~~vdgiii~~~ 78 (304)
T 3gbv_A 61 TSQAVIEEQPDGVMFAPT 78 (304)
T ss_dssp HHHHHHTTCCSEEEECCS
T ss_pred HHHHHHhcCCCEEEECCC
Confidence 455666778999999865
No 144
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=26.10 E-value=74 Score=25.80 Aligned_cols=55 Identities=15% Similarity=0.262 Sum_probs=34.0
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHH----HHHHHhCCe
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQ----CIGEAFGGK 62 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Q----ll~~~~gg~ 62 (174)
+..+++.+..+|+++|- ..+| .+-.-..+++...+..++|+|-..+ .|+..+|-.
T Consensus 153 ~i~~~i~~~~P~A~ii~--~TNP--vdi~T~~~~k~~p~~rViG~c~~~~r~~~~la~~lgv~ 211 (472)
T 1u8x_X 153 EILDYMEKYSPDAWMLN--YSNP--AAIVAEATRRLRPNSKILNICDMPVGIEDRMAQILGLS 211 (472)
T ss_dssp HHHHHHHHHCTTCEEEE--CCSC--HHHHHHHHHHHSTTCCEEECCSHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHCCCeEEEE--eCCc--HHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHHHhCcC
Confidence 45677777889998883 2222 2222244455556779999997754 345566654
No 145
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.05 E-value=53 Score=19.80 Aligned_cols=27 Identities=11% Similarity=0.287 Sum_probs=18.2
Q ss_pred eEEEecCCCCcCCCchHHHHHHHHHHH
Q 030626 138 LQGVQFHPESIITTEGKTIVRNFIKMI 164 (174)
Q Consensus 138 ~~g~QfHPE~~~~~~~~~l~~~f~~~~ 164 (174)
-++.++||.+...+.....|+..-++.
T Consensus 50 ~la~~~HPDk~~~~~~~~~f~~i~~Ay 76 (90)
T 2ys8_A 50 KLAVLLHPDKCVAPGSEDAFKAVVNAR 76 (90)
T ss_dssp HHHHHHCTTTCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHCcCCCCCccHHHHHHHHHHHH
Confidence 578999999976555555555554443
No 146
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=25.99 E-value=94 Score=22.02 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=22.4
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
++.+.+...++||||+.+...+ ...++.+.+ .++|++-+
T Consensus 50 ~~~~~l~~~~vdgii~~~~~~~----~~~~~~l~~--~~iPvV~~ 88 (275)
T 3d8u_A 50 KLLSTFLESRPAGVVLFGSEHS----QRTHQLLEA--SNTPVLEI 88 (275)
T ss_dssp HHHHHHHTSCCCCEEEESSCCC----HHHHHHHHH--HTCCEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCCC----HHHHHHHHh--CCCCEEEE
Confidence 3456666678999999865321 233333333 34676654
No 147
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=25.84 E-value=1.3e+02 Score=22.36 Aligned_cols=39 Identities=10% Similarity=0.290 Sum_probs=25.1
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCM 50 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~ 50 (174)
..|.|..+++|.||.++.. .....+.+.+. ++|++.+-.
T Consensus 76 n~E~i~~l~PDlIi~~~~~-----~~~~~~~L~~~--Gipvv~~~~ 114 (326)
T 3psh_A 76 NIESLLALKPDVVFVTNYA-----PSEMIKQISDV--NIPVVAISL 114 (326)
T ss_dssp CHHHHHHTCCSEEEEETTC-----CHHHHHHHHTT--TCCEEEECS
T ss_pred CHHHHHccCCCEEEEeCCC-----ChHHHHHHHHc--CCCEEEEec
Confidence 3688999999999876431 12233444433 599998754
No 148
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=25.66 E-value=1e+02 Score=22.50 Aligned_cols=19 Identities=11% Similarity=0.127 Sum_probs=14.3
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 49 ~~i~~l~~~~vdgiIi~~~ 67 (313)
T 3m9w_A 49 SQIENMINRGVDVLVIIPY 67 (313)
T ss_dssp HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 3456666678999999865
No 149
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=25.31 E-value=76 Score=24.12 Aligned_cols=31 Identities=19% Similarity=0.507 Sum_probs=16.9
Q ss_pred CCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 13 NPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 13 ~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
.+|.||+.. +......++....+ +||++|||
T Consensus 118 ~PdlliV~D----p~~e~~AI~EA~~l--gIPvIalv 148 (295)
T 2zkq_b 118 EPRLLVVTD----PRADHQPLTEASYV--NLPTIALC 148 (295)
T ss_dssp CCSEEEESC----TTTTHHHHHHHHHH--TCCEEEEE
T ss_pred CCCeEEEeC----CCcchhHHHHHHHh--CCCEEEEe
Confidence 367777652 22222223333334 59999998
No 150
>2nrt_A Uvrabc system protein C; UVRC, endonuclease, RNAse H, helix hairpin helix, NER, hydrolase; 1.50A {Thermotoga maritima} PDB: 2nrv_A 2nrw_A 2nrx_A 2nrz_A
Probab=25.30 E-value=35 Score=24.77 Aligned_cols=35 Identities=20% Similarity=0.501 Sum_probs=24.0
Q ss_pred CCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHh
Q 030626 14 PRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMG 51 (174)
Q Consensus 14 ~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G 51 (174)
||.|+|=||.|..... .+.+.+++-.+|+.|+-=+
T Consensus 85 PDLiliDGGkgQl~~a---~~vl~~lg~~i~v~glaK~ 119 (220)
T 2nrt_A 85 PNLLFVDGGIGQVNAA---IEALKEIGKDCPVVGLAKK 119 (220)
T ss_dssp CSEEEESSSHHHHHHH---HHHHHHTTCCCCEEEECTT
T ss_pred CCEEEEeCCHHHHHHH---HHHHHHcCCCCeEEEEECC
Confidence 8999999997753322 2333355667999998765
No 151
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=24.27 E-value=1.3e+02 Score=21.76 Aligned_cols=20 Identities=15% Similarity=0.303 Sum_probs=14.3
Q ss_pred hHHHHHHhcCCCEEEeCCCC
Q 030626 4 NYLVSYCRKNPRGVLISPGP 23 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~ 23 (174)
++.+.+...++||||+.+..
T Consensus 49 ~~i~~l~~~~vdgiIi~~~~ 68 (306)
T 2vk2_A 49 KAVRSFVAQGVDAIFIAPVV 68 (306)
T ss_dssp HHHHHHHHHTCSEEEECCSS
T ss_pred HHHHHHHHcCCCEEEEeCCC
Confidence 34556666789999998643
No 152
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=24.20 E-value=71 Score=22.93 Aligned_cols=19 Identities=11% Similarity=0.319 Sum_probs=13.9
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 52 ~~~~~l~~~~vdgiIi~~~ 70 (291)
T 3l49_A 52 SQIQTLIAQKPDAIIEQLG 70 (291)
T ss_dssp HHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 3456666678999998765
No 153
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=24.07 E-value=1.7e+02 Score=19.64 Aligned_cols=50 Identities=14% Similarity=0.295 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCceEEEeeCCCCceEEEecCCCCcCCCchHHHHHHHHHHHHH
Q 030626 115 ALEVTAWTEDGLIMAARHKKYKHLQGVQFHPESIITTEGKTIVRNFIKMIVR 166 (174)
Q Consensus 115 ~~~~~a~s~~~~i~a~~~~~~~~~~g~QfHPE~~~~~~~~~l~~~f~~~~~~ 166 (174)
..++.+.+.++.|...-..++. +..+...|+.. .++...+++..+-.+.+
T Consensus 66 ~~eveg~sGgGlVkVtvnG~~e-v~~I~Idp~ll-dpeD~E~LeDLI~aAvN 115 (143)
T 1ybx_A 66 EKTVEASAGGGAVTVVATGRKD-IKEITIKPEVV-DPDDVEMLQDLILAAVN 115 (143)
T ss_dssp HCEEEEEETTTTEEEEEETTCC-EEEEEECGGGC-CTTCHHHHHHHHHHHHH
T ss_pred cCEEEEEECCCEEEEEEecCce-EEEEEECHHHc-CCcCHHHHHHHHHHHHH
Confidence 5678888888988888777765 99999999984 44555666665555443
No 154
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=24.00 E-value=1.4e+02 Score=22.11 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=22.6
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
++.+.+...++||||+.+...+ ....+.+.+ .++|+.-+
T Consensus 109 ~~~~~l~~~~vdGiIi~~~~~~----~~~~~~l~~--~~iPvV~~ 147 (339)
T 3h5o_A 109 QLLRAYLQHRPDGVLITGLSHA----EPFERILSQ--HALPVVYM 147 (339)
T ss_dssp HHHHHHHTTCCSEEEEECSCCC----TTHHHHHHH--TTCCEEEE
T ss_pred HHHHHHHcCCCCEEEEeCCCCC----HHHHHHHhc--CCCCEEEE
Confidence 3456666678999999874322 123333332 34777655
No 155
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=23.96 E-value=1.5e+02 Score=23.03 Aligned_cols=62 Identities=23% Similarity=0.202 Sum_probs=35.5
Q ss_pred HHHHHhcCCCEEEeCCCCCCCC---------------Ccc-h---hHHHHHHcCCCCcEE---eehHhHHHH-HHHhCCe
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQ---------------DSG-I---SLQTVLELGPTVPLF---GVCMGLQCI-GEAFGGK 62 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~---------------~~~-~---~~~~i~~~~~~~Pil---GIC~G~Qll-~~~~gg~ 62 (174)
...+.+..+|+|++.|..|... +.+ . .+..+.....++||+ ||-.|..++ +.++|+.
T Consensus 223 A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~KaLalGAd 302 (365)
T 3sr7_A 223 IQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDIIKALVLGAK 302 (365)
T ss_dssp HHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHHHHHHHTCS
T ss_pred HHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHHHHHHcCCC
Confidence 3455566899999988655421 111 1 122333344579999 566777776 4567776
Q ss_pred eccCC
Q 030626 63 IVRSP 67 (174)
Q Consensus 63 v~~~~ 67 (174)
....-
T Consensus 303 aV~ig 307 (365)
T 3sr7_A 303 AVGLS 307 (365)
T ss_dssp EEEES
T ss_pred EEEEC
Confidence 65543
No 156
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=23.76 E-value=1.1e+02 Score=21.99 Aligned_cols=40 Identities=10% Similarity=0.169 Sum_probs=23.7
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
+..+.+...++||||+.+.... .....++.+ . .++|++-+
T Consensus 54 ~~~~~~~~~~vdgiii~~~~~~--~~~~~~~~~--~-~~iPvV~~ 93 (304)
T 3o1i_D 54 QQLALCTQWGANAIILGTVDPH--AYEHNLKSW--V-GNTPVFAT 93 (304)
T ss_dssp HHHHHHHHHTCSEEEECCSSTT--SSTTTHHHH--T-TTSCEEEC
T ss_pred HHHHHHHHcCCCEEEEeCCChh--HHHHHHHHH--c-CCCCEEEe
Confidence 3455666678999999865332 112223333 2 67888776
No 157
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=23.73 E-value=1.5e+02 Score=21.54 Aligned_cols=18 Identities=28% Similarity=0.541 Sum_probs=13.2
Q ss_pred HHHHHHhcCCCEEEeCCC
Q 030626 5 YLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG 22 (174)
..+.+...++||||+.+.
T Consensus 49 ~i~~l~~~~vdgiIi~~~ 66 (313)
T 2h3h_A 49 MLESFIAEGVNGIAIAPS 66 (313)
T ss_dssp HHHHHHHTTCSEEEECCS
T ss_pred HHHHHHHcCCCEEEEeCC
Confidence 455566678999999764
No 158
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.25 E-value=1.2e+02 Score=22.84 Aligned_cols=48 Identities=13% Similarity=0.080 Sum_probs=30.0
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHh--------HHHHHHHhC
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMG--------LQCIGEAFG 60 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G--------~Qll~~~~g 60 (174)
-.|.|..+++|.||..++ .....+.+.++ ++|++.+-.+ +..|+.++|
T Consensus 108 n~E~i~al~PDLIi~~~~------~~~~~~~L~~~--gipvv~~~~~~~~~~~~~i~~lg~~lg 163 (335)
T 4hn9_A 108 NTEACVAATPDVVFLPMK------LKKTADTLESL--GIKAVVVNPEDQSLLEECITLVGKITN 163 (335)
T ss_dssp CHHHHHHTCCSEEEEEGG------GHHHHHHHHHT--TCCEEEECCCSHHHHHHHHHHHHHHTT
T ss_pred CHHHHHhcCCCEEEEeCc------chhHHHHHHHc--CCCEEEEcCCCHHHHHHHHHHHHHHcC
Confidence 368899999999987543 12233444444 4898887533 345566666
No 159
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=23.23 E-value=1.9e+02 Score=21.70 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=27.6
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCc--c---hhHHHHHH-cCCCCcEEeehH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDS--G---ISLQTVLE-LGPTVPLFGVCM 50 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~--~---~~~~~i~~-~~~~~PilGIC~ 50 (174)
..+-+.+...|||++.|+-|-..-- . .+++.+.+ ...++||+.=+.
T Consensus 42 lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg 93 (304)
T 3cpr_A 42 VAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG 93 (304)
T ss_dssp HHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC
Confidence 3444555679999999987754322 2 23344443 566899874333
No 160
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=23.18 E-value=88 Score=22.26 Aligned_cols=38 Identities=16% Similarity=0.329 Sum_probs=22.3
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHH-HHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQ-TVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~-~i~~~~~~~PilGIC 49 (174)
.+.+.+...++||||+.+. ....++ .+.+ .++|+.-+-
T Consensus 55 ~~~~~l~~~~~dgiIi~~~------~~~~~~~~l~~--~~iPvV~~~ 93 (277)
T 3e61_A 55 GYLATFVSHNCTGMISTAF------NENIIENTLTD--HHIPFVFID 93 (277)
T ss_dssp HHHHHHHHTTCSEEEECGG------GHHHHHHHHHH--C-CCEEEGG
T ss_pred HHHHHHHhCCCCEEEEecC------ChHHHHHHHHc--CCCCEEEEe
Confidence 3456666678999999871 122333 3333 368887653
No 161
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=23.17 E-value=89 Score=22.47 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
..+.+...++||||+.+...+ ...++.+. .++|++-+.
T Consensus 56 ~~~~l~~~~vdgiI~~~~~~~----~~~~~~l~---~~iPvV~~~ 93 (285)
T 3c3k_A 56 CLTLLSGKMVDGVITMDALSE----LPELQNII---GAFPWVQCA 93 (285)
T ss_dssp HTHHHHTTCCSEEEECCCGGG----HHHHHHHH---TTSSEEEES
T ss_pred HHHHHHhCCCCEEEEeCCCCC----hHHHHHHh---cCCCEEEEc
Confidence 445566668999999764321 12233332 567876654
No 162
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=23.17 E-value=1.1e+02 Score=23.00 Aligned_cols=19 Identities=16% Similarity=-0.013 Sum_probs=14.8
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
++.+.+...++||||+.+.
T Consensus 119 ~~~~~l~~~~vdGiIi~~~ 137 (366)
T 3h5t_A 119 SAQQLVNNAAVDGVVIYSV 137 (366)
T ss_dssp HHHHHHHTCCCSCEEEESC
T ss_pred HHHHHHHhCCCCEEEEecC
Confidence 4566777778999999865
No 163
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=23.09 E-value=1.5e+02 Score=21.02 Aligned_cols=39 Identities=21% Similarity=0.231 Sum_probs=21.7
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
..+.+...++||||+.+...+ ....+.+.+ ..++|++.+
T Consensus 55 ~~~~l~~~~vdgii~~~~~~~----~~~~~~l~~-~~~iPvV~~ 93 (289)
T 1dbq_A 55 YLSMMAQKRVDGLLVMCSEYP----EPLLAMLEE-YRHIPMVVM 93 (289)
T ss_dssp HHHHHHHTTCSEEEEECSCCC----HHHHHHHHH-TTTSCEEEE
T ss_pred HHHHHHhCCCCEEEEEeccCC----HHHHHHHHh-ccCCCEEEE
Confidence 455666678999999765332 122333332 245776544
No 164
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=22.87 E-value=1.8e+02 Score=23.37 Aligned_cols=60 Identities=17% Similarity=0.271 Sum_probs=33.0
Q ss_pred HHHHHhcCCCEEEeCCCCCCCCCc-----------c--------hhHHHHHH-cCCCCcEEee---hHhHHHHHHH-hCC
Q 030626 6 LVSYCRKNPRGVLISPGPGAPQDS-----------G--------ISLQTVLE-LGPTVPLFGV---CMGLQCIGEA-FGG 61 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG~~~~~~~-----------~--------~~~~~i~~-~~~~~PilGI---C~G~Qll~~~-~gg 61 (174)
.+.+.+...|+|+++++-....+. + .+++.+++ ...++||+|. .-|-...... .|+
T Consensus 317 A~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~aGA 396 (443)
T 1tv5_A 317 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIEAGA 396 (443)
T ss_dssp HHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHHTTE
T ss_pred HHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHHcCC
Confidence 344556689999999975532211 1 12333444 4458999964 4455555433 444
Q ss_pred eecc
Q 030626 62 KIVR 65 (174)
Q Consensus 62 ~v~~ 65 (174)
....
T Consensus 397 d~Vq 400 (443)
T 1tv5_A 397 SVCQ 400 (443)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 4443
No 165
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=22.60 E-value=95 Score=24.94 Aligned_cols=54 Identities=19% Similarity=0.282 Sum_probs=33.2
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehHhHHH----HHHHhCC
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCMGLQC----IGEAFGG 61 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~G~Ql----l~~~~gg 61 (174)
+..+++.+..+|+++|- ..+| .+-.-..+++......++|+|-..+- |+..+|-
T Consensus 134 ~i~~~i~~~~P~a~ii~--~tNP--vdivT~a~~k~~p~~rViG~c~~~~r~~~~la~~lgv 191 (450)
T 1s6y_A 134 DIIRDMEELCPDAWLIN--FTNP--AGMVTEAVLRYTKQEKVVGLCNVPIGMRMGVAKLLGV 191 (450)
T ss_dssp HHHHHHHHHCTTCEEEE--CSSS--HHHHHHHHHHHCCCCCEEECCSHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHCCCeEEEE--eCCc--HHHHHHHHHHhCCCCCEEEeCCcHHHHHHHHHHHhCC
Confidence 45677777889998883 2222 22233444455566699999977543 4556664
No 166
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=22.51 E-value=65 Score=24.10 Aligned_cols=43 Identities=5% Similarity=0.171 Sum_probs=26.5
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCc-----chhHHHHHH-cCCCCcEEe
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDS-----GISLQTVLE-LGPTVPLFG 47 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~-----~~~~~~i~~-~~~~~PilG 47 (174)
..+-+.+...|||++.|+-|-..-- ..+++...+ ...++||+.
T Consensus 27 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 27 LVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp HHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred HHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 3445555689999999987754311 123344443 566799874
No 167
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=22.25 E-value=11 Score=33.53 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=31.9
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHc-----CCCCcEEee-------------hHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLEL-----GPTVPLFGV-------------CMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~-----~~~~PilGI-------------C~G~Qll~~ 57 (174)
..+.+.+++.|++|+.||.++.... ..+.+. ..++|+.|| |+|+...+.
T Consensus 654 i~~~l~~~~Id~LvvIGGdgS~~~a----~~L~~~~~~~~~~~i~vVGIPkTIDNDl~gTD~TiGfdTA~~ 720 (941)
T 3opy_B 654 IAYFFEKYGFDGLILVGGFEAFISL----HQLERARINYPSLRIPLVLIPATISNNVPGTEYSLGSDTCLN 720 (941)
T ss_dssp HHHHHHHTTCSEEEEEESHHHHHHH----HHHHHGGGTCGGGCSCEEEEEBCSSCCCTTCSCCBTHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCchHHHHH----HHHHHHHHhcCccCCcEEeeeccccCCCCCCCCCCChHHHHH
Confidence 4456777899999999998753221 122211 125777775 999987764
No 168
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=22.08 E-value=1.2e+02 Score=22.55 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=22.2
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
++.+.+...++||||+.+...+ ...++.+.+ .++|+.-+
T Consensus 115 ~~i~~l~~~~vdGiIi~~~~~~----~~~~~~l~~--~~iPvV~i 153 (344)
T 3kjx_A 115 KVLYEMLSWRPSGVIIAGLEHS----EAARAMLDA--AGIPVVEI 153 (344)
T ss_dssp HHHHHHHTTCCSEEEEECSCCC----HHHHHHHHH--CSSCEEEE
T ss_pred HHHHHHHhCCCCEEEEECCCCC----HHHHHHHHh--CCCCEEEE
Confidence 3456666678999999864321 123333332 35776655
No 169
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=21.90 E-value=71 Score=23.10 Aligned_cols=39 Identities=13% Similarity=0.050 Sum_probs=22.7
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
+..+.+...++||||+.+...+ ...++.+. .++|+.-+.
T Consensus 57 ~~~~~l~~~~vdgiIi~~~~~~----~~~~~~~~---~~iPvV~i~ 95 (289)
T 3k9c_A 57 VAVQALMRERCEAAILLGTRFD----TDELGALA---DRVPALVVA 95 (289)
T ss_dssp HHHHHHTTTTEEEEEEETCCCC----HHHHHHHH---TTSCEEEES
T ss_pred HHHHHHHhCCCCEEEEECCCCC----HHHHHHHH---cCCCEEEEc
Confidence 3456666678999999875432 12233322 267776554
No 170
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=21.76 E-value=11 Score=32.91 Aligned_cols=53 Identities=9% Similarity=0.061 Sum_probs=31.7
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHc-CCCCcEEee-------------hHhHHHHHH
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLEL-GPTVPLFGV-------------CMGLQCIGE 57 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~-~~~~PilGI-------------C~G~Qll~~ 57 (174)
..+.+.+++.|++|+-||.++......+.+..... ..++|+.|| |+||...+.
T Consensus 475 ~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vIgiPkTIDNDl~gTD~t~GfdTA~~ 541 (787)
T 3o8o_A 475 IAYYFQKNKLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIPATVSNNVPGTEYSLGVDTCLN 541 (787)
T ss_dssp HHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTTCGGGGSCEEEEEBCTTCCCTTCSCCBTHHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHHhcCccCCceeecccccccCCCCCcCCCCchHHHH
Confidence 34567788999999999987532211111110000 124666665 999988764
No 171
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=21.66 E-value=1.2e+02 Score=22.61 Aligned_cols=39 Identities=10% Similarity=0.341 Sum_probs=23.0
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEee
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGV 48 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGI 48 (174)
++.+.+...++||||+.+...+ ...++.+.+ .++|+.-+
T Consensus 117 ~~~~~l~~~~vdGiI~~~~~~~----~~~~~~l~~--~~iPvV~i 155 (355)
T 3e3m_A 117 QLVETMLRRRPEAMVLSYDGHT----EQTIRLLQR--ASIPIVEI 155 (355)
T ss_dssp HHHHHHHHTCCSEEEEECSCCC----HHHHHHHHH--CCSCEEEE
T ss_pred HHHHHHHhCCCCEEEEeCCCCC----HHHHHHHHh--CCCCEEEE
Confidence 4556666778999999764322 222333332 45777765
No 172
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=21.56 E-value=1.7e+02 Score=20.92 Aligned_cols=17 Identities=24% Similarity=0.108 Sum_probs=12.0
Q ss_pred HHHHHhcCCCEEEeCCC
Q 030626 6 LVSYCRKNPRGVLISPG 22 (174)
Q Consensus 6 ~~~~~~~~~dgiii~GG 22 (174)
.+.+...++||||+.+.
T Consensus 59 ~~~l~~~~vdgiIi~~~ 75 (288)
T 3gv0_A 59 RYILETGSADGVIISKI 75 (288)
T ss_dssp HHHHHHTCCSEEEEESC
T ss_pred HHHHHcCCccEEEEecC
Confidence 34455568999999864
No 173
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=21.41 E-value=1.9e+02 Score=20.71 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=22.7
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
..+.+...++||||+.+...+ .....++.+ ...++|++-+.
T Consensus 51 ~~~~~~~~~vdgiii~~~~~~--~~~~~~~~~--~~~~iPvV~~~ 91 (309)
T 2fvy_A 51 QIDVLLAKGVKALAINLVDPA--AAGTVIEKA--RGQNVPVVFFN 91 (309)
T ss_dssp HHHHHHHTTCSEEEECCSSGG--GHHHHHHHH--HTTTCCEEEES
T ss_pred HHHHHHHcCCCEEEEeCCCcc--hhHHHHHHH--HHCCCcEEEec
Confidence 455666678999999764221 111222322 24568877654
No 174
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=21.32 E-value=1.2e+02 Score=22.01 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=22.5
Q ss_pred hHHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeeh
Q 030626 4 NYLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVC 49 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC 49 (174)
.+.+.+...++||||+.|.+. ...+.....++|++-+.
T Consensus 53 ~~~~~l~~~~vDgII~~~~~~--------~~~~~~~~~~iPvV~~~ 90 (295)
T 3lft_A 53 TMSKQLVANGNDLVVGIATPA--------AQGLASATKDLPVIMAA 90 (295)
T ss_dssp HHHHHHTTSSCSEEEEESHHH--------HHHHHHHCSSSCEEEES
T ss_pred HHHHHHHhcCCCEEEECCcHH--------HHHHHHcCCCCCEEEEe
Confidence 456677777899999875311 11122234678877653
No 175
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=21.26 E-value=1.7e+02 Score=21.56 Aligned_cols=19 Identities=16% Similarity=0.294 Sum_probs=14.1
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
.+.+.+...++||||+.+.
T Consensus 110 ~~~~~l~~~~vdgiI~~~~ 128 (332)
T 2o20_A 110 KVLETFLSKQVDGIVYMGS 128 (332)
T ss_dssp HHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHhCCCCEEEEeCC
Confidence 3456666678999999875
No 176
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=21.12 E-value=1.2e+02 Score=22.12 Aligned_cols=19 Identities=11% Similarity=0.114 Sum_probs=13.9
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 50 ~~i~~~~~~~vdgiIi~~~ 68 (330)
T 3uug_A 50 SQIENMVTKGVKVLVIASI 68 (330)
T ss_dssp HHHHHHHHHTCSEEEECCS
T ss_pred HHHHHHHHcCCCEEEEEcC
Confidence 3456666678999999764
No 177
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=20.87 E-value=58 Score=24.76 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=23.2
Q ss_pred ceEEEecCCCCcCCCchHHHHHHHHHHHHH
Q 030626 137 HLQGVQFHPESIITTEGKTIVRNFIKMIVR 166 (174)
Q Consensus 137 ~~~g~QfHPE~~~~~~~~~l~~~f~~~~~~ 166 (174)
.++.+-+||+....+.-...|++|++.+.+
T Consensus 260 ~~~~i~lH~~~~g~p~r~~~le~fL~~i~~ 289 (321)
T 3s6o_A 260 KMMSIGMHCRLLGRPGRFRALQRFLDHIER 289 (321)
T ss_dssp EEEEEEEETTTTTSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEeChHHcCCHHHHHHHHHHHHHHHh
Confidence 489999999984333346899999998865
No 178
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=20.67 E-value=98 Score=22.34 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=14.1
Q ss_pred hHHHHHHhcCCCEEEeCCC
Q 030626 4 NYLVSYCRKNPRGVLISPG 22 (174)
Q Consensus 4 ~~~~~~~~~~~dgiii~GG 22 (174)
+..+.+...++||||+.+.
T Consensus 48 ~~i~~l~~~~vdgiii~~~ 66 (306)
T 8abp_A 48 NAIDSLAASGAKGFVICTP 66 (306)
T ss_dssp HHHHHHHHTTCCEEEEECS
T ss_pred HHHHHHHHcCCCEEEEeCC
Confidence 3556666678999999864
No 179
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=20.31 E-value=1.5e+02 Score=21.08 Aligned_cols=51 Identities=16% Similarity=0.156 Sum_probs=31.2
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCcchhHHHHHHcCCCCcEEeehH---------hHHHHHHHhCC
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDSGISLQTVLELGPTVPLFGVCM---------GLQCIGEAFGG 61 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~~~~~~~i~~~~~~~PilGIC~---------G~Qll~~~~gg 61 (174)
-.|.|..+++|.||.+.... .....+.+.+++ +|++.+-. -+..|+.++|.
T Consensus 51 n~E~i~~l~PDlIi~~~~~~----~~~~~~~L~~~g--ipvv~~~~~~~~~~~~~~i~~lg~~~g~ 110 (255)
T 3md9_A 51 NAEGILAMKPTMLLVSELAQ----PSLVLTQIASSG--VNVVTVPGQTTPESVAMKINAVATALHQ 110 (255)
T ss_dssp CHHHHHTTCCSEEEEETTCS----CHHHHHHHHHTT--CEEEEECCCCSHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHccCCCEEEEcCCcC----chhHHHHHHHcC--CcEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 36889999999999765432 122334444443 88887632 14456666663
No 180
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=20.30 E-value=1.1e+02 Score=22.69 Aligned_cols=11 Identities=9% Similarity=0.241 Sum_probs=9.2
Q ss_pred cCCCCcEEeeh
Q 030626 39 LGPTVPLFGVC 49 (174)
Q Consensus 39 ~~~~~PilGIC 49 (174)
..-++|+.|+|
T Consensus 137 ~~l~IP~Ial~ 147 (252)
T 3u5c_A 137 SYVNIPVIALT 147 (252)
T ss_dssp HTTTCCEEEEE
T ss_pred HHcCCCEEEEE
Confidence 45679999999
No 181
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=20.25 E-value=1.2e+02 Score=22.76 Aligned_cols=45 Identities=11% Similarity=0.205 Sum_probs=27.5
Q ss_pred HHHHHHhcCCCEEEeCCCCCCCCCc--c---hhHHHHHH-cCCCCcEEeeh
Q 030626 5 YLVSYCRKNPRGVLISPGPGAPQDS--G---ISLQTVLE-LGPTVPLFGVC 49 (174)
Q Consensus 5 ~~~~~~~~~~dgiii~GG~~~~~~~--~---~~~~~i~~-~~~~~PilGIC 49 (174)
..+-+.+...|||++.|+-|-..-- . .+++...+ ...++||+.=+
T Consensus 33 lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGv 83 (297)
T 3flu_A 33 LIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGT 83 (297)
T ss_dssp HHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEC
T ss_pred HHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 4455556689999999987754321 1 23344433 56779987533
No 182
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.24 E-value=64 Score=18.65 Aligned_cols=26 Identities=12% Similarity=0.212 Sum_probs=15.4
Q ss_pred eEEEecCCCCcCCCchHHHHHHHHHH
Q 030626 138 LQGVQFHPESIITTEGKTIVRNFIKM 163 (174)
Q Consensus 138 ~~g~QfHPE~~~~~~~~~l~~~f~~~ 163 (174)
-++.++||.+...+.....|...-++
T Consensus 30 ~l~~~~HPDk~~~~~~~~~f~~i~~A 55 (78)
T 2ctp_A 30 RLALKFHPDKNHAPGATEAFKAIGTA 55 (78)
T ss_dssp HHHTTSCTTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHCcCCCCCccHHHHHHHHHHH
Confidence 45779999986544444444444333
Done!