BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030632
(174 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255541992|ref|XP_002512060.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223549240|gb|EEF50729.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 176
Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 147/168 (87%), Positives = 160/168 (95%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
VQKNTLYVGGLA+EVNEAILHAAFIPFGDIKDVKTPLDQATQKHR+FGFVTFLEKEDA
Sbjct: 9 VQKNTLYVGGLADEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRAFGFVTFLEKEDAAA 68
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAE 125
AMDNMDGAELYGRVLTVNYALPE+IKGGEQGWAAQPIW DADTWFERQ+ +EEM+R+QAE
Sbjct: 69 AMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWKDADTWFERQRHQEEMERIQAE 128
Query: 126 NRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
N+A MQAAEELHRKKMA++REGEKE++ E+KDDPMARAEAEV KQN S
Sbjct: 129 NKATMQAAEELHRKKMAQEREGEKEDEMEVKDDPMARAEAEVSKQNGS 176
>gi|225433902|ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 299 bits (766), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 156/172 (90%), Positives = 164/172 (95%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED
Sbjct: 2 NQPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR+
Sbjct: 62 AAAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRI 121
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNSS 174
QAENRAAMQAAEELHRKKMA++REGEK+E+ E KDDPMAR EAEVL Q+NSS
Sbjct: 122 QAENRAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAEVLNQSNSS 173
>gi|297844272|ref|XP_002890017.1| hypothetical protein ARALYDRAFT_471529 [Arabidopsis lyrata subsp.
lyrata]
gi|297335859|gb|EFH66276.1| hypothetical protein ARALYDRAFT_471529 [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 295 bits (754), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 137/166 (82%), Positives = 155/166 (93%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
KNTLYVGGLA+EVNE+ILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLE+EDA AM
Sbjct: 12 KNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAM 71
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNMDGAELYGRVLTVNYALPE+IKGGEQGWAA P+WADADTWFERQQQE+EM ++QAEN+
Sbjct: 72 DNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFERQQQEKEMLKMQAENK 131
Query: 128 AAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
AAM+ AEELHRKK+A+DR+GE EED+E KDDPMARAEA+ L +++
Sbjct: 132 AAMETAEELHRKKLAQDRQGEMEEDTETKDDPMARAEADALSHSDA 177
>gi|449452837|ref|XP_004144165.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
gi|449529401|ref|XP_004171688.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cucumis
sativus]
Length = 171
Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/168 (90%), Positives = 163/168 (97%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
AVQKNTLYVGGLAEEVNE+ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA
Sbjct: 4 AVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA
Sbjct: 64 AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 123
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
ENRAAM+AAEELHRKK+A++REGEK+E+ + K DPMA+AEAEVL+QN+
Sbjct: 124 ENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171
>gi|30683419|ref|NP_563931.2| ATPase E1 [Arabidopsis thaliana]
gi|110736770|dbj|BAF00346.1| AtE1 [Arabidopsis thaliana]
gi|332190937|gb|AEE29058.1| ATPase E1 [Arabidopsis thaliana]
Length = 177
Score = 291 bits (744), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 135/166 (81%), Positives = 154/166 (92%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
KNTLYVGGLA+EVNE+ILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVTFLE+EDA AM
Sbjct: 12 KNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDASAAM 71
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNMDGAELYGRVLTVNYALPE+IKGGEQGWAA P+WADADTWFERQQQE+E+ ++QAEN+
Sbjct: 72 DNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFERQQQEKEILKMQAENK 131
Query: 128 AAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
AAM+ AEELHRKK+AEDR+GE EED++ K+DPMARAEA+ L ++
Sbjct: 132 AAMETAEELHRKKLAEDRQGEMEEDTDTKNDPMARAEADALSHGDA 177
>gi|356499919|ref|XP_003518783.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
Length = 172
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 147/165 (89%), Positives = 160/165 (96%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
VQKNTLYVGGLAEEVNE+ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+EDA
Sbjct: 6 GVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAS 65
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQP+WADADTWFERQQQEEEM+R++A
Sbjct: 66 AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMKRIEA 125
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLK 169
ENRAAMQAAE+LHRK++AE REGEKEE+ E+KDDPMA+AEAEVL+
Sbjct: 126 ENRAAMQAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQ 170
>gi|356498016|ref|XP_003517851.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Glycine max]
Length = 172
Score = 280 bits (717), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/165 (87%), Positives = 158/165 (95%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
VQKNTLYVGGLAEEVNE ILHAAFIPFGDIKDVKTPLDQA+QKHRSFGFVTFLE+EDA
Sbjct: 6 GVQKNTLYVGGLAEEVNELILHAAFIPFGDIKDVKTPLDQASQKHRSFGFVTFLEREDAS 65
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQP+WADADTWFERQQQEEEM+R++
Sbjct: 66 AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPVWADADTWFERQQQEEEMKRIEK 125
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLK 169
ENRAAM+AAE+LHRK++AE REGEKEE+ E+KDDPMA+AEAEVL+
Sbjct: 126 ENRAAMEAAEDLHRKQVAEQREGEKEEEIEIKDDPMAKAEAEVLQ 170
>gi|357487649|ref|XP_003614112.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|217073180|gb|ACJ84949.1| unknown [Medicago truncatula]
gi|355515447|gb|AES97070.1| Peptidyl-prolyl cis-trans isomerase E [Medicago truncatula]
gi|388494832|gb|AFK35482.1| unknown [Medicago truncatula]
Length = 170
Score = 278 bits (711), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 142/164 (86%), Positives = 157/164 (95%), Gaps = 1/164 (0%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
VQKNTLYVGGLAEEVNE+ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+EDA
Sbjct: 6 GVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAS 65
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNMDGAELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWFERQQQEE+M+RL+A
Sbjct: 66 AAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEDMRRLEA 125
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVL 168
EN+AAM AAEELHRK++AE+RE ++E+ E+KDDPMARAEAEV+
Sbjct: 126 ENKAAMLAAEELHRKQVAEERE-GEKEEIEIKDDPMARAEAEVV 168
>gi|388514621|gb|AFK45372.1| unknown [Medicago truncatula]
Length = 168
Score = 278 bits (710), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 142/164 (86%), Positives = 157/164 (95%), Gaps = 1/164 (0%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
VQKNTLYVGGLAEEVNE+ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+EDA
Sbjct: 4 GVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAS 63
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNMDGAELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWFERQQQEE+M+RL+A
Sbjct: 64 AAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEDMRRLEA 123
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVL 168
EN+AAM AAEELHRK++AE+RE ++E+ E+KDDPMARAEAEV+
Sbjct: 124 ENKAAMLAAEELHRKQVAEERE-GEKEEIEIKDDPMARAEAEVV 166
>gi|224101457|ref|XP_002312289.1| predicted protein [Populus trichocarpa]
gi|222852109|gb|EEE89656.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 277 bits (708), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/168 (91%), Positives = 163/168 (97%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
VQKNTLYVGGLAEEVNEAILHA FIPFGDIKDVKTPLDQATQKHRSFGFVTFLE+EDA
Sbjct: 7 VQKNTLYVGGLAEEVNEAILHATFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDAAS 66
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAE 125
AMDNMDGAELYGRVLTVNYALPE+IKGGEQGWAAQPIWADADTWFERQQQEEEMQR+QAE
Sbjct: 67 AMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPIWADADTWFERQQQEEEMQRMQAE 126
Query: 126 NRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
NRAAM+AAEELHRKKMAE+REGEKE++ ++KDDPMARAEAEVLKQN S
Sbjct: 127 NRAAMEAAEELHRKKMAEEREGEKEDEGQVKDDPMARAEAEVLKQNIS 174
>gi|357121197|ref|XP_003562307.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Brachypodium
distachyon]
Length = 166
Score = 276 bits (707), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 133/170 (78%), Positives = 152/170 (89%), Gaps = 5/170 (2%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG++KDVKTPLDQATQKHRSFGFVTFLE+ED
Sbjct: 2 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLERED 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAEL+GRVLTVNYA PERIKGGEQGWAAQPIWADADTWFERQQQEEEM+RL
Sbjct: 62 AAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQPIWADADTWFERQQQEEEMKRL 121
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
QAE+ AAM+ AE+LHR+K+A +++GEKEE DPMA EA+ +KQ++
Sbjct: 122 QAEHSAAMKEAEKLHREKVAAEKDGEKEE-----ADPMAATEAQAVKQSS 166
>gi|219363055|ref|NP_001136648.1| uncharacterized protein LOC100216777 [Zea mays]
gi|194696500|gb|ACF82334.1| unknown [Zea mays]
gi|195636542|gb|ACG37739.1| nucleic acid-binding/nucleotide-binding protein [Zea mays]
gi|195646368|gb|ACG42652.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
gi|413933690|gb|AFW68241.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
Length = 165
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 155/170 (91%), Gaps = 6/170 (3%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG++KDVKTPLDQ+TQKHRSFGFVTFLE+ED
Sbjct: 2 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLERED 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAEL+GRVLTVNYA PERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL
Sbjct: 62 AAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 121
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
QAE+RAAMQAAE+LHR+K+A +REGEKEE DPMA AEA+ +KQ++
Sbjct: 122 QAEHRAAMQAAEKLHREKLAAEREGEKEE------DPMAAAEAQAVKQSS 165
>gi|326522080|dbj|BAK04168.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 193
Score = 264 bits (674), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 144/166 (86%), Gaps = 5/166 (3%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG++KDVKTPLDQATQKHRSFGFVTFLE+ED
Sbjct: 32 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVKDVKTPLDQATQKHRSFGFVTFLERED 91
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAEL+GRVLTVNYA PE+IKGGEQGWAAQP+WADADTWFERQQQEEEM+RL
Sbjct: 92 AAAAMDNMDGAELFGRVLTVNYAFPEKIKGGEQGWAAQPVWADADTWFERQQQEEEMKRL 151
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVL 168
Q E AAM+ AE LHR+K+A ++ GE +E DPMA AEA+ +
Sbjct: 152 QTEQNAAMKEAERLHREKVAAEKNGETDE-----ADPMAVAEAQAV 192
>gi|225433910|ref|XP_002266074.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Vitis
vinifera]
Length = 168
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/171 (83%), Positives = 150/171 (87%), Gaps = 9/171 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEVNE+ILH+AFIPFGDIKDVK HRSFGFVTFLEKED
Sbjct: 2 NQPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVK---------HRSFGFVTFLEKED 52
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A MDNMDGAELYGRVLTVNYALPERIKGGEQGWAA+PIWADADTWFERQQQEEEMQR+
Sbjct: 53 AAALMDNMDGAELYGRVLTVNYALPERIKGGEQGWAARPIWADADTWFERQQQEEEMQRI 112
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
QAENRAAMQAAEELHRKKMA++REGEK+E+ E KDDPMAR EA K NNS
Sbjct: 113 QAENRAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAYKRKMNNS 163
>gi|30017481|gb|AAP12903.1| putative peptidyl-prolyl cis-trans isomerase [Oryza sativa Japonica
Group]
gi|108709685|gb|ABF97480.1| Peptidyl-prolyl cis-trans isomerase E, putative, expressed [Oryza
sativa Japonica Group]
gi|125544766|gb|EAY90905.1| hypothetical protein OsI_12520 [Oryza sativa Indica Group]
gi|125587046|gb|EAZ27710.1| hypothetical protein OsJ_11659 [Oryza sativa Japonica Group]
Length = 171
Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/170 (82%), Positives = 157/170 (92%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG+IKDVKTPLDQATQKHRSFGFVTFLE+ED
Sbjct: 2 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEIKDVKTPLDQATQKHRSFGFVTFLERED 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAEL+GRVLTVNYA PERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL
Sbjct: 62 AAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 121
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
QAE RAAMQAAE+LHR+K+A ++EGEKEE+++ DPMA AEA+ LKQ++
Sbjct: 122 QAEQRAAMQAAEKLHREKLAAEKEGEKEEETDTNADPMAAAEAQALKQSS 171
>gi|242033729|ref|XP_002464259.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
gi|241918113|gb|EER91257.1| hypothetical protein SORBIDRAFT_01g015060 [Sorghum bicolor]
Length = 168
Score = 249 bits (637), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/170 (81%), Positives = 157/170 (92%), Gaps = 3/170 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG++KDVKTPLDQ+TQKHRSFGFVTFLE+ED
Sbjct: 2 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVKDVKTPLDQSTQKHRSFGFVTFLERED 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A AMDNMDGAEL+GRVLTVNYA PERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL
Sbjct: 62 AAAAMDNMDGAELFGRVLTVNYAFPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 121
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
QAE+RAAMQAAE+LHR+K+A +REGEKEE++ DPMA AEA+ +KQ++
Sbjct: 122 QAEHRAAMQAAEKLHREKLAAEREGEKEEETA---DPMAAAEAQAVKQSS 168
>gi|168001864|ref|XP_001753634.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695041|gb|EDQ81386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/162 (70%), Positives = 131/162 (80%), Gaps = 1/162 (0%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGL E V E ++HAAFIPFGD+KD+ PLDQATQKHR F F+T+ EKEDA AM
Sbjct: 6 KTTLYVGGLEENVTEQVVHAAFIPFGDVKDISMPLDQATQKHRGFAFITYFEKEDAAAAM 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNM ELYGRVLTVNYA P++IKGGEQGWA+Q +WADADTWFERQQQEEEM+RL AE++
Sbjct: 66 DNMHNGELYGRVLTVNYAQPQKIKGGEQGWASQAVWADADTWFERQQQEEEMKRLNAEHQ 125
Query: 128 AAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLK 169
A + AAEE RKK+ E REGE E D + DDPMA AEAE LK
Sbjct: 126 ATVSAAEEADRKKLQEVREGETEAD-DATDDPMAAAEAEALK 166
>gi|168005596|ref|XP_001755496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693203|gb|EDQ79556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 168
Score = 224 bits (572), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/165 (64%), Positives = 129/165 (78%), Gaps = 1/165 (0%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A K +LYVGGL + V E ++HAA IPFGD+KD+ PLDQATQKHR F F+T+ EKEDA
Sbjct: 3 ASPKTSLYVGGLEKNVTEQVVHAASIPFGDVKDISMPLDQATQKHRGFAFITYFEKEDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
AMDNM ELYGRVLTVNYA P+++KGGEQGWA+Q +WADADTWFERQQQEEE+ RL
Sbjct: 63 AAMDNMHNGELYGRVLTVNYAQPQKMKGGEQGWASQAVWADADTWFERQQQEEEINRLNV 122
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLK 169
E++A + AAEE RKK+ E +EGE E+ + +DPMA AEAE LK
Sbjct: 123 EHQATVSAAEEADRKKLQEAQEGETEQ-GDAAEDPMAAAEAEALK 166
>gi|224108872|ref|XP_002314998.1| predicted protein [Populus trichocarpa]
gi|222864038|gb|EEF01169.1| predicted protein [Populus trichocarpa]
Length = 141
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/135 (84%), Positives = 120/135 (88%), Gaps = 3/135 (2%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
VQKNTLYVGGLAEE NE+ILHAAFIPFGDIKDVKTPLDQA QKHRSFGFVT LE+E A+
Sbjct: 7 VQKNTLYVGGLAEEANESILHAAFIPFGDIKDVKTPLDQAKQKHRSFGFVTLLEREVAVA 66
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQP---IWADADTWFERQQQEEEMQRL 122
AM NMDGAELYGRVLTVNYALPE+IKGGEQGWAAQP +ADTWFE QQQEEEMQR+
Sbjct: 67 AMGNMDGAELYGRVLTVNYALPEKIKGGEQGWAAQPSKYFSLNADTWFEGQQQEEEMQRM 126
Query: 123 QAENRAAMQAAEELH 137
QAENRAAMQ AE LH
Sbjct: 127 QAENRAAMQPAENLH 141
>gi|302761116|ref|XP_002963980.1| hypothetical protein SELMODRAFT_142186 [Selaginella moellendorffii]
gi|300167709|gb|EFJ34313.1| hypothetical protein SELMODRAFT_142186 [Selaginella moellendorffii]
Length = 174
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 113/134 (84%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL E VNE +LHAAFIPFGDIKDV PLDQ TQKHR FGFVT+LE++DA AM
Sbjct: 7 KTALYVGGLDENVNEEVLHAAFIPFGDIKDVTMPLDQGTQKHRGFGFVTYLERDDAAAAM 66
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNM +EL+G+VLTVNYA P +IKGGEQGWA+QPIWADADTWFERQQ+E EM++L+AE
Sbjct: 67 DNMHNSELFGKVLTVNYAQPMKIKGGEQGWASQPIWADADTWFERQQRELEMKKLKAEQD 126
Query: 128 AAMQAAEELHRKKM 141
A ++AA+E RKK+
Sbjct: 127 ATVKAAQEAERKKL 140
>gi|302768509|ref|XP_002967674.1| hypothetical protein SELMODRAFT_69014 [Selaginella moellendorffii]
gi|300164412|gb|EFJ31021.1| hypothetical protein SELMODRAFT_69014 [Selaginella moellendorffii]
Length = 138
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/138 (70%), Positives = 115/138 (83%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GGL E VNE +LHAAFIPFGDIKDV PLDQ TQKHR FGFVT+LE++DA AMDNM +
Sbjct: 1 GGLDENVNEEVLHAAFIPFGDIKDVTMPLDQGTQKHRGFGFVTYLERDDAAAAMDNMHNS 60
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENRAAMQAA 133
EL+G+VLTVNYA P +IKGGEQGWA+QPIWADADTWFERQQ+E EM++L+AE A ++AA
Sbjct: 61 ELFGKVLTVNYAQPMKIKGGEQGWASQPIWADADTWFERQQRELEMKKLKAEQDATVKAA 120
Query: 134 EELHRKKMAEDREGEKEE 151
+E RKK+ + EGE EE
Sbjct: 121 QEAERKKLLDALEGEVEE 138
>gi|8920574|gb|AAF81296.1|AC027656_13 Identical to AtE1 from Arabidopsis thaliana gb|U64825. It contains
a RNA recognition motif domain PF|00076. EST gb|Z26218
comes from this gene [Arabidopsis thaliana]
gi|12248015|gb|AAG50099.1|AF334721_1 unknown protein [Arabidopsis thaliana]
gi|1498064|gb|AAB06334.1| AtE1 [Arabidopsis thaliana]
Length = 107
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 98/107 (91%)
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
MDNMDGAELYGRVLTVNYALPE+IKGGEQGWAA P+WADADTWFERQQQE+E+ ++QAEN
Sbjct: 1 MDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFERQQQEKEILKMQAEN 60
Query: 127 RAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
+AAM+ AEELHRKK+AEDR+GE EED++ K+DPMARAEA+ L ++
Sbjct: 61 KAAMETAEELHRKKLAEDRQGEMEEDTDTKNDPMARAEADALSHGDA 107
>gi|195646416|gb|ACG42676.1| peptidyl-prolyl cis-trans isomerase E [Zea mays]
Length = 127
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/170 (61%), Positives = 119/170 (70%), Gaps = 44/170 (25%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
N VQKNTLYVGGLAEEV+E ILHAAF+PFG++K
Sbjct: 2 NQPVQKNTLYVGGLAEEVDEKILHAAFVPFGEVK-------------------------- 35
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
L+GRVLTVNYA PERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL
Sbjct: 36 ------------LFGRVLTVNYAFPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 83
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNN 172
QAE+RAAMQAAE+LHR+K+A +REGEKEE DPMA AEA+ +KQ++
Sbjct: 84 QAEHRAAMQAAEKLHREKLAAEREGEKEE------DPMAAAEAQAVKQSS 127
>gi|384245985|gb|EIE19477.1| hypothetical protein COCSUDRAFT_67908 [Coccomyxa subellipsoidea
C-169]
Length = 164
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/138 (57%), Positives = 102/138 (73%), Gaps = 1/138 (0%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGGL E VNEAILH+AFIPFGDIKDV PLD T KHR FGFV + ED+ A
Sbjct: 15 KKTTLYVGGLEENVNEAILHSAFIPFGDIKDVNIPLDNTTGKHRGFGFVEYENAEDSADA 74
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
+DNM AELYGRVL NYA P +IKGG++G++ QP+WADAD W+ER + E+E+++L AE
Sbjct: 75 IDNMHNAELYGRVLRCNYAQPMKIKGGDKGFSHQPVWADADDWYERAEAEQELEKL-AEE 133
Query: 127 RAAMQAAEELHRKKMAED 144
+ AE+L ++ +D
Sbjct: 134 QGKKAQAEKLKAGQLVKD 151
>gi|297743801|emb|CBI36684.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/107 (87%), Positives = 100/107 (93%)
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
MDNMDGAELYGRVLTVNYALPERIKGGEQGWAA+PIWADADTWFERQQQEEEMQR+QAEN
Sbjct: 1 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAARPIWADADTWFERQQQEEEMQRIQAEN 60
Query: 127 RAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQNNS 173
RAAMQAAEELHRKKMA++REGEK+E+ E KDDPMAR EA K NNS
Sbjct: 61 RAAMQAAEELHRKKMAQEREGEKDEEVEGKDDPMARVEAYKRKMNNS 107
>gi|159474538|ref|XP_001695382.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
gi|158275865|gb|EDP01640.1| nuclear cap-binding protein [Chlamydomonas reinhardtii]
Length = 143
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 93/128 (72%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGL E VNEA LHAAF+PFG+IK+V P+D AT HR FGFV + EK+DA A+
Sbjct: 16 KTTLYVGGLEESVNEATLHAAFLPFGEIKEVNMPIDHATGTHRGFGFVEYEEKDDAAAAI 75
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNM+ AEL+GRVL VNYA P +IKGG++GW+ P+WAD D + E + E+EM + E R
Sbjct: 76 DNMNNAELFGRVLKVNYAQPMKIKGGDKGWSHLPVWADTDKYIEELEAEKEMDEYEKEQR 135
Query: 128 AAMQAAEE 135
A A+E
Sbjct: 136 KAALVAKE 143
>gi|307104419|gb|EFN52673.1| hypothetical protein CHLNCDRAFT_32442 [Chlorella variabilis]
Length = 164
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 73/115 (63%), Positives = 86/115 (74%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL VNEA LH+AFIPFG+IK+V PLD AT HR FGFV F EDA AM
Sbjct: 16 KTALYVGGLESTVNEAALHSAFIPFGEIKEVSLPLDHATGTHRGFGFVEFEAAEDAADAM 75
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
DNM +ELYGRVL VNYA P +IKGG++GWA+Q +WADAD W+E+ EEE+ +L
Sbjct: 76 DNMHNSELYGRVLRVNYAQPNKIKGGDKGWASQAVWADADDWYEKHIAEEELDKL 130
>gi|302829787|ref|XP_002946460.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
gi|300268206|gb|EFJ52387.1| hypothetical protein VOLCADRAFT_79186 [Volvox carteri f.
nagariensis]
Length = 186
Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/122 (58%), Positives = 85/122 (69%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGL E VNEA LHAAF+PFG+IK+V PLD AT HR FGFV + EKEDA A+
Sbjct: 17 KTTLYVGGLEETVNEATLHAAFLPFGEIKEVNIPLDHATGTHRGFGFVEYEEKEDAAAAI 76
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNM AEL+GRVL VNYA P +IKGG++GW+ P+WAD D + E E + +R
Sbjct: 77 DNMHNAELFGRVLKVNYAQPMKIKGGDKGWSHLPVWADTDRYIEELDAEVSVYMCMVRHR 136
Query: 128 AA 129
A
Sbjct: 137 HA 138
>gi|303281722|ref|XP_003060153.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458808|gb|EEH56105.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 123
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 67/96 (69%), Positives = 78/96 (81%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GGL E+V EA LHAAFIPFGD+KDV PLD TQK+R FGFVTF EK+DA +AM+NM A
Sbjct: 1 GGLDEQVTEAFLHAAFIPFGDLKDVNIPLDHTTQKNRGFGFVTFEEKDDAKEAMENMHNA 60
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTW 109
ELYGRV+ NYA P+ IKGGEQGW+ QP+WADAD +
Sbjct: 61 ELYGRVIRCNYAKPQAIKGGEQGWSMQPVWADADKY 96
>gi|255082442|ref|XP_002504207.1| predicted protein [Micromonas sp. RCC299]
gi|226519475|gb|ACO65465.1| predicted protein [Micromonas sp. RCC299]
Length = 105
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 74/98 (75%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GGL E+V AILHAAFIPFG IKDV P+D TQ HR FGFVTF E EDA +AMDNM A
Sbjct: 1 GGLEEQVTTAILHAAFIPFGPIKDVDIPMDHQTQAHRGFGFVTFEETEDAAEAMDNMHNA 60
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
ELYG+VL NYA P IKGG QGW+ QP+WADAD + E
Sbjct: 61 ELYGKVLRCNYAQPRAIKGGNQGWSMQPVWADADKYKE 98
>gi|387915672|gb|AFK11445.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 11/135 (8%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER------QQQEE 117
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++ ++ E
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFAGKTLEENES 115
Query: 118 EMQRLQAENRAAMQA 132
E Q +A N A +
Sbjct: 116 ETQGGEATNTQAQEG 130
>gi|392884214|gb|AFM90939.1| peptidyl-prolyl cis-trans isomerase E-like protein [Callorhinchus
milii]
Length = 302
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/135 (48%), Positives = 88/135 (65%), Gaps = 11/135 (8%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFENAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER------QQQEE 117
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++ ++ E
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFAGKTLEENES 115
Query: 118 EMQRLQAENRAAMQA 132
E Q +A N A +
Sbjct: 116 ETQGGEATNTQAQEG 130
>gi|449488973|ref|XP_004186222.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E [Taeniopygia guttata]
Length = 271
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DEWLKK 104
>gi|432937500|ref|XP_004082430.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Oryzias
latipes]
Length = 302
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR FGF+ F EDA
Sbjct: 1 MASNKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFGFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|118101790|ref|XP_423739.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Gallus gallus]
Length = 301
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 61/109 (55%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W +R
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DEWLKR 104
>gi|340371235|ref|XP_003384151.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Amphimedon
queenslandica]
Length = 306
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 60/112 (53%), Positives = 80/112 (71%), Gaps = 6/112 (5%)
Query: 1 MANLA-VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
MA +A K LYVGGL+EEVNE ILH+AFIPFGDI D+ PLD ++QKHR F FV F
Sbjct: 1 MATIAQANKRVLYVGGLSEEVNEKILHSAFIPFGDIVDISIPLDYSSQKHRGFAFVEFEA 60
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
EDA A+DNMD +E++GR + VN A P+ +K G +++P+W++ DTW +
Sbjct: 61 TEDAAAAIDNMDNSEIFGRTIRVNIARPKMLKEG----SSRPVWSE-DTWIK 107
>gi|345319884|ref|XP_001515609.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Ornithorhynchus anatinus]
Length = 300
Score = 125 bits (313), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DEWLKK 104
>gi|301792689|ref|XP_002931311.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Ailuropoda
melanoleuca]
Length = 116
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|344287649|ref|XP_003415565.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Loxodonta
africana]
Length = 301
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 86/132 (65%), Gaps = 13/132 (9%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTW--------FERQQQ 115
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W E ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFSGKTLEESKE 115
Query: 116 EEEMQRLQAENR 127
EE Q +AE +
Sbjct: 116 EEGSQPAKAETQ 127
>gi|387017750|gb|AFJ50993.1| Peptidyl-prolyl cis-trans isomerase E-like [Crotalus adamanteus]
Length = 301
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 86/129 (66%), Gaps = 5/129 (3%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGD+ D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MASSKRVLYVGGLAEEVDERVLHAAFIPFGDLTDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQ 123
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++ + + L+
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFSGKTLQENLE 115
Query: 124 AENRAAMQA 132
E A ++
Sbjct: 116 EEGAVAARS 124
>gi|444706912|gb|ELW48229.1| Peptidyl-prolyl cis-trans isomerase E [Tupaia chinensis]
Length = 301
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|229366886|gb|ACQ58423.1| Peptidyl-prolyl cis-trans isomerase E [Anoplopoma fimbria]
Length = 302
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MAANKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELGEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNTAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|332248424|ref|XP_003273363.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2
[Nomascus leucogenys]
Length = 314
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|73917051|gb|AAZ93379.1| cyclophilin-33B [Homo sapiens]
Length = 314
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|303305009|ref|NP_001181936.1| peptidyl-prolyl cis-trans isomerase E isoform 4 [Homo sapiens]
gi|208967014|dbj|BAG73521.1| peptidylprolyl isomerase E [synthetic construct]
Length = 314
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|383862957|ref|XP_003706949.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like, partial [Megachile rotundata]
Length = 326
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E ILHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 39 KRTIYVGGLAEEVDEKILHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAATAI 98
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 99 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DAWLQEHAGE 142
>gi|291399196|ref|XP_002715239.1| PREDICTED: peptidylprolyl isomerase E [Oryctolagus cuniculus]
Length = 296
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|410966852|ref|XP_003989941.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Felis
catus]
Length = 296
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|45439316|ref|NP_982281.1| peptidyl-prolyl cis-trans isomerase E isoform 2 [Homo sapiens]
gi|2828151|gb|AAC00007.1| cyclophilin-33B [Homo sapiens]
gi|4406229|gb|AAD19907.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
Length = 296
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|327285414|ref|XP_003227428.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Anolis
carolinensis]
Length = 301
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MASTKRVLYVGGLAEEVDERVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|348553004|ref|XP_003462317.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cavia
porcellus]
Length = 301
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|332248426|ref|XP_003273364.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3
[Nomascus leucogenys]
Length = 296
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|431922548|gb|ELK19491.1| Peptidyl-prolyl cis-trans isomerase E [Pteropus alecto]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|395526569|ref|XP_003765433.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Sarcophilus
harrisii]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P +IK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMKIKEG----SSRPVWSD-DDWLKK 104
>gi|126330203|ref|XP_001365208.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Monodelphis
domestica]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P +IK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMKIKEG----SSRPVWSD-DEWLKK 104
>gi|14196340|ref|NP_062362.1| peptidyl-prolyl cis-trans isomerase E [Mus musculus]
gi|37154834|sp|Q9QZH3.2|PPIE_MOUSE RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|12842203|dbj|BAB25512.1| unnamed protein product [Mus musculus]
gi|28278787|gb|AAH45154.1| Peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
gi|148698442|gb|EDL30389.1| peptidylprolyl isomerase E (cyclophilin E) [Mus musculus]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|109002460|ref|XP_001113613.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 3 [Macaca
mulatta]
gi|332248422|ref|XP_003273362.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Nomascus leucogenys]
gi|402854044|ref|XP_003891690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Papio anubis]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|340720106|ref|XP_003398484.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus terrestris]
Length = 331
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 44 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAI 103
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 104 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DVWLQEHAGE 147
>gi|119627661|gb|EAX07256.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_b [Homo
sapiens]
gi|410226050|gb|JAA10244.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268070|gb|JAA22001.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307920|gb|JAA32560.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 296
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|354485865|ref|XP_003505102.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Cricetulus
griseus]
gi|344236478|gb|EGV92581.1| Peptidyl-prolyl cis-trans isomerase E [Cricetulus griseus]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|355713007|gb|AES04539.1| peptidylprolyl isomerase E [Mustela putorius furo]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|197098002|ref|NP_001126436.1| peptidyl-prolyl cis-trans isomerase E [Pongo abelii]
gi|75041350|sp|Q5R723.1|PPIE_PONAB RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|55731450|emb|CAH92437.1| hypothetical protein [Pongo abelii]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|403292044|ref|XP_003937068.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|296207581|ref|XP_002750690.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1
[Callithrix jacchus]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|149693770|ref|XP_001503484.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 2
[Equus caballus]
Length = 296
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W +
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLRK 104
>gi|73976759|ref|XP_848739.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 2 [Canis
lupus familiaris]
gi|410966850|ref|XP_003989940.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Felis
catus]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|350410727|ref|XP_003489121.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Bombus impatiens]
Length = 361
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 74 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAI 133
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 134 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DVWLQEHAGE 177
>gi|395853060|ref|XP_003799038.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Otolemur
garnettii]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|296488946|tpg|DAA31059.1| TPA: peptidylprolyl isomerase E [Bos taurus]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|5174637|ref|NP_006103.1| peptidyl-prolyl cis-trans isomerase E isoform 1 [Homo sapiens]
gi|332808526|ref|XP_001171465.2| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 8 [Pan
troglodytes]
gi|397488858|ref|XP_003815459.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Pan
paniscus]
gi|426329070|ref|XP_004025567.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E isoform 1 [Gorilla
gorilla gorilla]
gi|13124097|sp|Q9UNP9.1|PPIE_HUMAN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName:
Full=Cyclophilin-33; AltName: Full=Rotamase E
gi|4406227|gb|AAD19906.1| peptidyl-prolyl cis-trans isomerase E [Homo sapiens]
gi|13436167|gb|AAH04898.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|14250089|gb|AAH08451.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|78395107|gb|AAI07737.1| Peptidylprolyl isomerase E (cyclophilin E) [Homo sapiens]
gi|119627660|gb|EAX07255.1| peptidylprolyl isomerase E (cyclophilin E), isoform CRA_a [Homo
sapiens]
gi|189053911|dbj|BAG36418.1| unnamed protein product [Homo sapiens]
gi|312150756|gb|ADQ31890.1| peptidylprolyl isomerase E (cyclophilin E) [synthetic construct]
gi|410226048|gb|JAA10243.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410268072|gb|JAA22002.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
gi|410307918|gb|JAA32559.1| peptidylprolyl isomerase E (cyclophilin E) [Pan troglodytes]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|311258960|ref|XP_003127865.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Sus scrofa]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|2828149|gb|AAC00006.1| cyclophilin-33A [Homo sapiens]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|432095454|gb|ELK26650.1| Peptidyl-prolyl cis-trans isomerase E [Myotis davidii]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|114145536|ref|NP_001041333.1| peptidyl-prolyl cis-trans isomerase E [Rattus norvegicus]
gi|33086482|gb|AAP92553.1| Ab1-210 [Rattus norvegicus]
Length = 255
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|148238144|ref|NP_001091630.1| peptidyl-prolyl cis-trans isomerase E [Bos taurus]
gi|251823903|ref|NP_001156520.1| peptidyl-prolyl cis-trans isomerase E [Ovis aries]
gi|182676483|sp|A4FV72.1|PPIE_BOVIN RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|133777612|gb|AAI23819.1| PPIE protein [Bos taurus]
gi|238799776|gb|ACR55760.1| peptidylprolyl isomerase E [Ovis aries]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|351713681|gb|EHB16600.1| Peptidyl-prolyl cis-trans isomerase E [Heterocephalus glaber]
Length = 301
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|149023873|gb|EDL80370.1| peptidylprolyl isomerase E (cyclophilin E) [Rattus norvegicus]
gi|165970632|gb|AAI58561.1| Ppie protein [Rattus norvegicus]
Length = 301
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|182889546|gb|AAI65323.1| Ppie protein [Danio rerio]
Length = 302
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F ED+
Sbjct: 1 MAASKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDS 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|62955333|ref|NP_001017678.1| peptidyl-prolyl cis-trans isomerase E [Danio rerio]
gi|62531317|gb|AAH93329.1| Peptidylprolyl isomerase E (cyclophilin E) [Danio rerio]
Length = 302
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F ED+
Sbjct: 1 MAASKRVLYVGGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFIEFELAEDS 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|328782599|ref|XP_003250169.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Apis mellifera]
Length = 331
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 44 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAI 103
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 104 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DVWLQEHAGE 147
>gi|410898226|ref|XP_003962599.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Takifugu
rubripes]
gi|19526273|gb|AAL89667.1|AF411956_8 cyclophilin [Takifugu rubripes]
Length = 300
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LY+GGLAEEV+E +LHAAFIPFGD+ D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MAANKRVLYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W +R
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKR 104
>gi|158259649|dbj|BAF85783.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLANPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|440898130|gb|ELR49690.1| Peptidyl-prolyl cis-trans isomerase E, partial [Bos grunniens
mutus]
Length = 280
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|149693768|ref|XP_001503477.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W +
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLRK 104
>gi|380015375|ref|XP_003691678.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Apis florea]
Length = 293
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 6 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFESAEDAAAAI 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 66 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DVWLQEHAGE 109
>gi|348517411|ref|XP_003446227.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Oreochromis
niloticus]
Length = 302
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MAANKRVLYVGGLAEEVDEKVLHAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTVRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|149693777|ref|XP_001503512.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like isoform 1
[Equus caballus]
Length = 301
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W +
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLRK 104
>gi|357617301|gb|EHJ70708.1| putative peptidyl-prolyl cis-trans isomerase E [Danaus plexippus]
Length = 303
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MA+ K T+YVGGLAEEV+E IL+AAFIPFGD+ DV+ PLD ++KHR F F+ F
Sbjct: 1 MASKPNSKRTIYVGGLAEEVDEKILNAAFIPFGDLVDVQIPLDYESEKHRGFAFIEFENA 60
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
EDA A+DNM+ +EL+GR + VN A P+RIK G + +P+W++ D+W ++
Sbjct: 61 EDAAAAIDNMNDSELFGRTIRVNIAAPQRIKEG----STRPVWSE-DSWLQKH 108
>gi|332028166|gb|EGI68217.1| Peptidyl-prolyl cis-trans isomerase E [Acromyrmex echinatior]
Length = 293
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 6 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFETAEDAAAAI 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 66 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DAWLQEHAGE 109
>gi|189242406|ref|XP_001810193.1| PREDICTED: similar to putative peptidyl-prolyl cis-trans isomerase
E [Tribolium castaneum]
gi|270016278|gb|EFA12724.1| hypothetical protein TcasGA2_TC002359 [Tribolium castaneum]
Length = 302
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 5/110 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K T+YVGGLAEEV++ +L+AAFIPFGDI D++ PLD T+KHR F F+ F EDA A
Sbjct: 5 SKRTIYVGGLAEEVDDKVLNAAFIPFGDIVDIQIPLDYETEKHRGFAFIEFESAEDAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
+DNM+ +EL+GR + VN A P+RIK G + +P+W++ DTW ++ E
Sbjct: 65 IDNMNDSELFGRTIRVNLAKPQRIKEG----STRPVWSE-DTWLQQHAGE 109
>gi|313238973|emb|CBY13961.1| unnamed protein product [Oikopleura dioica]
Length = 315
Score = 122 bits (306), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
K LYVGGLAEEV+E ++HAAFIPFGDI D+ PLD T+ HR F FV + E DA
Sbjct: 3 TTNKKLLYVGGLAEEVDEKMVHAAFIPFGDIIDITVPLDFETEAHRGFAFVEYKETGDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
AMDNMD AEL+GR L VN A P ++K G ++P+WAD D+W +
Sbjct: 63 SAMDNMDDAELFGRTLKVNIARPIKMKDGHY---SRPVWAD-DSWLSK 106
>gi|225716982|gb|ACO14337.1| Peptidyl-prolyl cis-trans isomerase E [Esox lucius]
Length = 302
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 57/109 (52%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGL EEV+E +LHAAFIPFGDI D++ P+D T+KHR F F+ F EDA
Sbjct: 1 MASTKRVLYVGGLTEEVDEKVLHAAFIPFGDITDIQIPIDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|213512892|ref|NP_001134807.1| peptidyl-prolyl cis-trans isomerase E [Salmo salar]
gi|209736222|gb|ACI68980.1| Peptidyl-prolyl cis-trans isomerase E [Salmo salar]
Length = 302
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGL EEV+E +LHAAFIPFGD+ D++ P+D T+KHR F F+ F EDA
Sbjct: 1 MAATKRVLYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|242012725|ref|XP_002427078.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
gi|212511336|gb|EEB14340.1| peptidyl-prolyl cis-trans isomerase E, putative [Pediculus humanus
corporis]
Length = 158
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 5/105 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
QK T+Y GGLAEEV+E +L+AAFIPFGDI D++ PLD T+KHR F F+ F EDA A
Sbjct: 5 QKRTIYAGGLAEEVDENVLNAAFIPFGDIIDIQIPLDYETEKHRGFAFIEFESAEDAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
+DNM+ +EL+GR + VN A P++IK G + +P+W++ D+W +
Sbjct: 65 IDNMNDSELFGRTIRVNLAKPQKIKEG----STKPVWSE-DSWLQ 104
>gi|307189573|gb|EFN73937.1| Peptidyl-prolyl cis-trans isomerase E [Camponotus floridanus]
Length = 293
Score = 122 bits (305), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV+E +LHAAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+
Sbjct: 6 KRTIYVGGLAEEVDEKVLHAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEMAEDAAAAI 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ +EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 66 DNMNDSELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DAWLQEHAGE 109
>gi|67970111|dbj|BAE01400.1| unnamed protein product [Macaca fascicularis]
Length = 301
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/109 (53%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T++HR F FV F EDA
Sbjct: 1 MATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEEHRGFAFVEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|6007762|gb|AAF01030.1|AF182825_1 cyclophilin-33 [Mus musculus]
Length = 298
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 76/105 (72%), Gaps = 5/105 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+
Sbjct: 2 KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAPAI 61
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 62 DNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 101
>gi|225703276|gb|ACO07484.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGL EEV+E +LHAAFIPFGD+ D + P+D T+KHR F F+ F EDA
Sbjct: 1 MAATKRVLYVGGLTEEVDEKVLHAAFIPFGDVTDTQIPIDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|291222246|ref|XP_002731128.1| PREDICTED: peptidylprolyl isomerase E-like [Saccoglossus
kowalevskii]
Length = 307
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K +YVGGLAEEV+E +LHAAFIPFGD+ D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAANKRIVYVGGLAEEVDEKVLHAAFIPFGDLVDIQIPLDYETEKHRGFSFVEFENPEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQ 114
A+DNM+ +EL+GR + VN A P +IK G A + +WAD D W +
Sbjct: 61 AAAIDNMNDSELFGRTIRVNLAKPMKIKEG----ANKAVWAD-DNWLRKHS 106
>gi|301624824|ref|XP_002941698.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Xenopus
(Silurana) tropicalis]
Length = 301
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 77/109 (70%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGLAEEV+E ILHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 1 MAATKRVLYVGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+GR + VN A P R+K G +++ +W+D D W ++
Sbjct: 61 AAAIDNMNESELFGRTIRVNLAKPMRLKEG----SSKAVWSD-DDWLKK 104
>gi|241149709|ref|XP_002406178.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
gi|215493819|gb|EEC03460.1| cyclophilin type peptidyl-prolyl cis-trans isomerase, putative
[Ixodes scapularis]
Length = 292
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 6/114 (5%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K +YVGGLAEEV+E +LHAAFIPFGD+ DV+ PLD T+KHR F FV F + EDA+ A
Sbjct: 5 SKRIVYVGGLAEEVDEKVLHAAFIPFGDVVDVQIPLDYETEKHRGFAFVEFEQAEDAVAA 64
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
+DNM+ +EL+GR + VN A P +IK G + + +W++ D+W RQ E +
Sbjct: 65 IDNMNDSELFGRTIRVNVAKPMKIKEG----STRAVWSE-DSWL-RQHAGETLN 112
>gi|238231621|ref|NP_001153996.1| peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
gi|225703282|gb|ACO07487.1| Peptidyl-prolyl cis-trans isomerase E [Oncorhynchus mykiss]
Length = 302
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LYVGGL EEV+E +LHAAFIPFGD+ D++ P+D T+KHR F F+ F EDA
Sbjct: 1 MAATKRVLYVGGLTEEVDEKVLHAAFIPFGDVTDIQIPIDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +EL+G + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 AAAIDNMNESELFGGTIRVNIAKPMRIKEG----SSRPVWSD-DDWLKK 104
>gi|346467825|gb|AEO33757.1| hypothetical protein [Amblyomma maculatum]
Length = 306
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 78/116 (67%), Gaps = 6/116 (5%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
K +YVGGLAEEV+E +LHAAFIPFGD+ DV+ PLD TQKHR F FV F + EDA
Sbjct: 3 TTSKRMVYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETQKHRGFAFVEFEQAEDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
A+DNM+ +EL+GR + VN A P +IK G + + +W++ D+W RQ E +
Sbjct: 63 AAIDNMNDSELFGRTIRVNIAKPMKIKEG----STRAVWSE-DSWL-RQHAGETLN 112
>gi|405968843|gb|EKC33872.1| Peptidyl-prolyl cis-trans isomerase E [Crassostrea gigas]
Length = 302
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 91/158 (57%), Gaps = 24/158 (15%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A K +YVGGLAEEV+E LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 3 AQNKRIVYVGGLAEEVDEKTLHAAFIPFGDILDIQIPLDYETEKHRGFAFVEFELAEDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQA 124
A+DNM+ +E++GR L VN A P ++K G +++ +W++ DTW +
Sbjct: 63 AAIDNMNDSEMFGRTLRVNMAKPMKLKEG----SSRAVWSE-DTWLQ------------- 104
Query: 125 ENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMAR 162
+ A + KK ED EGE E+ E+ P +
Sbjct: 105 ------EYAGKTADKKSTEDPEGETEKSVELDAPPTKK 136
>gi|332375218|gb|AEE62750.1| unknown [Dendroctonus ponderosae]
Length = 223
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 5/109 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K +YVGGLAEE+ E +L AAFIPFGDI D++ PLD ++KHR F F+ F EDA A+
Sbjct: 6 KKIVYVGGLAEEICEEVLKAAFIPFGDIVDIQIPLDYESEKHRGFAFIEFETSEDAGAAV 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
DNM+ AEL+GR + VN A P++IK G + +P+W++ DTW ++ E
Sbjct: 66 DNMNDAELFGRTIRVNLAKPQKIKEG----STRPVWSE-DTWLQKHAGE 109
>gi|225713872|gb|ACO12782.1| Peptidyl-prolyl cis-trans isomerase E [Lepeophtheirus salmonis]
Length = 311
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 98/169 (57%), Gaps = 8/169 (4%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
+ A K TLYVGGLAEEV E +L AAFIPFG+I +V+ P+D T+KHR F F+ + E D
Sbjct: 2 DYANTKKTLYVGGLAEEVEEKVLKAAFIPFGEITEVQIPIDYQTEKHRGFAFIEYEEPRD 61
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRL 122
A A+DNM +EL+GR L VN A P R+K +++P+WAD D W ++ + +
Sbjct: 62 ATAAIDNMHDSELFGRTLRVNLAKPLRLKES----SSKPVWAD-DEWLQKYSGQTISKPS 116
Query: 123 QAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMARAEAEVLKQN 171
+A + + + + R +A+ E+ + + K +P + + K N
Sbjct: 117 EASDDNGNEESSGVKRDAVADS---EEPAEKKSKSNPQVYFDVRIGKTN 162
>gi|427776735|gb|JAA53819.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase
[Rhipicephalus pulchellus]
Length = 306
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 77/116 (66%), Gaps = 6/116 (5%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
K +YVGGLAEEV+E +LHAAFIPFGD+ DV+ PLD T+KHR F FV F EDA
Sbjct: 3 TTSKRIVYVGGLAEEVDEKVLHAAFIPFGDLVDVQIPLDYETEKHRGFAFVEFESAEDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
A+DNM+ +EL+GR + VN A P +IK G + + +W++ D+W RQ E +
Sbjct: 63 AAIDNMNDSELFGRTIRVNIAKPMKIKEG----STRAVWSE-DSWL-RQHAGETLN 112
>gi|156377813|ref|XP_001630840.1| predicted protein [Nematostella vectensis]
gi|156217869|gb|EDO38777.1| predicted protein [Nematostella vectensis]
Length = 298
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 14/145 (9%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MAN K YVGGLAEEV+E +LHAAFIPFGDI DV+ P+D T KHR FGFV F
Sbjct: 1 MAN----KRVAYVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFA 56
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQ----QE 116
ED A+DNM+ +EL+GR + VN A P +IK G ++ +W++ D+W ++ +E
Sbjct: 57 EDTAAAIDNMNESELFGRTIRVNLAKPMKIKEG----YSRAVWSE-DSWLQKHAGQTLEE 111
Query: 117 EEMQRLQAENRAAMQAAEELHRKKM 141
++ E AM+ + + RK++
Sbjct: 112 KDSTETSGETDEAME-TQPVSRKRV 135
>gi|390341388|ref|XP_799104.3| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Strongylocentrotus purpuratus]
Length = 313
Score = 116 bits (290), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 72/105 (68%), Gaps = 5/105 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K YVGGLAEEV E LHAAFIPFGDI D++ PLD T+KHR F FV F ED ++
Sbjct: 7 KRIAYVGGLAEEVTEKTLHAAFIPFGDIMDIQIPLDYETEKHRGFAFVEFEFAEDCAASI 66
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
DNM+ +EL+GR + VN A P +IK G +A+ +W+D DTW ++
Sbjct: 67 DNMNDSELFGRTIRVNLAKPMKIKDG----SAKAVWSD-DTWLKK 106
>gi|281337315|gb|EFB12899.1| hypothetical protein PANDA_022213 [Ailuropoda melanoleuca]
Length = 231
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 73/101 (72%), Gaps = 5/101 (4%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
+ GGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+DNM+
Sbjct: 124 HAGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMN 183
Query: 72 GAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 184 ESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 219
>gi|417409425|gb|JAA51218.1| Putative cyclophilin-type peptidyl-prolyl cis-trans isomerase,
partial [Desmodus rotundus]
Length = 294
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 5/102 (4%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y GGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+DNM
Sbjct: 1 IYGGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 60
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+ +EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 NESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 97
>gi|225711114|gb|ACO11403.1| Peptidyl-prolyl cis-trans isomerase E [Caligus rogercresseyi]
Length = 313
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K TLYVGGLAEEV+E +L AFIPFG+I +V+ P+D T+KHR F F+ + E DA A
Sbjct: 6 SKKTLYVGGLAEEVDEKVLKGAFIPFGEITEVQVPIDYQTEKHRGFAFIEYEEPRDAAAA 65
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
+DNM +ELYGR L VN A P R+K +++P+WAD D W ++ + + +
Sbjct: 66 IDNMHDSELYGRTLRVNLAKPLRLKES----SSKPVWAD-DEWLQKYSGQTISKPTE--- 117
Query: 127 RAAMQAAEELHRKKMAEDREGEKEEDSE--MKDDPMARAEAEVLKQN 171
+ + EE + D + + EE SE K +P + + K N
Sbjct: 118 HSEVPKGEEESSTAVKRDADIDAEEPSEKKAKKNPQVYFDVRIGKTN 164
>gi|159163861|pdb|2CQB|A Chain A, Solution Structure Of The Rna Recognition Motif In
Peptidyl- Prolyl Cis-Trans Isomerase E
Length = 102
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 53/90 (58%), Positives = 66/90 (73%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
+ +A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F E
Sbjct: 6 SGMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAE 65
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIK 91
DA A+DNM+ +EL+GR + VN A P RIK
Sbjct: 66 DAAAAIDNMNESELFGRTIRVNLAKPMRIK 95
>gi|449268619|gb|EMC79473.1| Peptidyl-prolyl cis-trans isomerase E, partial [Columba livia]
Length = 291
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 5/99 (5%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GGLAEEV+E +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+DNM+ +
Sbjct: 1 GGLAEEVDEKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNES 60
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
EL+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 ELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DEWLKK 94
>gi|302768525|ref|XP_002967682.1| hypothetical protein SELMODRAFT_69028 [Selaginella moellendorffii]
gi|300164420|gb|EFJ31029.1| hypothetical protein SELMODRAFT_69028 [Selaginella moellendorffii]
Length = 92
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 73/92 (79%)
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEM 119
++DA AMDNM +EL+ ++LTVNYA P +IKG EQGWA+QPIWADADTWFER+Q+E EM
Sbjct: 1 RDDATAAMDNMHNSELFRKLLTVNYAQPMKIKGREQGWASQPIWADADTWFERKQRELEM 60
Query: 120 QRLQAENRAAMQAAEELHRKKMAEDREGEKEE 151
++L+AE A ++ A+E RKK+ + EGE EE
Sbjct: 61 KKLKAEQDATVKEAQEAERKKLLDALEGEPEE 92
>gi|148236416|ref|NP_001090502.1| peptidylprolyl isomerase E (cyclophilin E) [Xenopus laevis]
gi|114107971|gb|AAI23372.1| MGC154898 protein [Xenopus laevis]
Length = 294
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 74/102 (72%), Gaps = 5/102 (4%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+GGLAEEV+E ILHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+DNM
Sbjct: 1 MYLGGLAEEVDEKILHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELPEDAAAAIDNM 60
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+ +EL+GR + VN A P R+K G +++ +W+D D W ++
Sbjct: 61 NESELFGRTIRVNLAKPMRLKEG----SSKAVWSD-DDWLKK 97
>gi|193582455|ref|XP_001947710.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like
[Acyrthosiphon pisum]
Length = 298
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV++ +L +AFIPFGDI DV+ PLD ++KHR F FV F + EDA+ ++
Sbjct: 12 KRTVYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSI 71
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF 110
DNM+ AE++GR + VN A P++I G + +P+W++ D W
Sbjct: 72 DNMNEAEIFGRTIRVNLAKPQKINRG----STRPVWSE-DDWL 109
>gi|158298753|ref|XP_318916.3| AGAP009810-PA [Anopheles gambiae str. PEST]
gi|157014037|gb|EAA14200.3| AGAP009810-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 73/110 (66%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+ K T+YVGGL+EEV E ++ AFIPFGD+ D++ P+D +QKHR F F+ F EDA
Sbjct: 1 MTSDKRTVYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P+RIK G +P+WAD D W ++
Sbjct: 61 AAAVDNMNDSELCGRTIRVNTAKPQRIKEGSN----RPVWAD-DNWLQKH 105
>gi|299473131|emb|CBN78707.1| Peptidyl-prolyl cis-trans isomerase E [Ectocarpus siliculosus]
Length = 135
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
M A K +YVGGL E+VNE ILHAAF+PFGDI +V P D HR FGFV F +
Sbjct: 1 MPKEAQPKRNVYVGGLEEQVNEEILHAAFVPFGDIVEVNLPKDHVANTHRGFGFVEFEVE 60
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
EDA A+DNMDGAELYG+VL VN A P + K G A +W+ AD W++ E
Sbjct: 61 EDAKAAIDNMDGAELYGKVLRVNAAKPMKHKLG----AHTAVWS-ADDWYKNTLVE 111
>gi|239791068|dbj|BAH72048.1| ACYPI010179 [Acyrthosiphon pisum]
Length = 298
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 75/103 (72%), Gaps = 5/103 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLAEEV++ +L +AFIPFGDI DV+ PLD ++KHR F FV F + EDA+ ++
Sbjct: 12 KRTVYVGGLAEEVDDKVLRSAFIPFGDIVDVQMPLDYESEKHRGFAFVEFEQPEDALDSI 71
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF 110
DNM+ AE++GR + VN A P++I G + +P+W++ D W
Sbjct: 72 DNMNEAEIFGRTIRVNLAKPQKINRG----STRPVWSE-DDWL 109
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGL++EV E +++ AFIPFGD+ D++ P+D +QKHR F F+ F EDA A+
Sbjct: 5 KRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAAAAV 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P+RIK G +P+WA+ DTW ++
Sbjct: 65 DNMNDSELCGRTIRVNIAKPQRIKEGSN----KPVWAE-DTWLQQH 105
>gi|47219549|emb|CAG09903.1| unnamed protein product [Tetraodon nigroviridis]
Length = 326
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 66/92 (71%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K LY+GGLAEEV+E +LHAAFIPFGD+ D++ PLD T+KHR F F+ F EDA
Sbjct: 1 MAANKRVLYIGGLAEEVDEKVLHAAFIPFGDLIDIQIPLDYETEKHRGFAFIEFELAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQ 95
A+DNM+ +EL+GR + VN A P RIK G
Sbjct: 61 AAAIDNMNESELFGRTIRVNIAKPMRIKEGSS 92
>gi|56755023|gb|AAW25694.1| SJCHGC05278 protein [Schistosoma japonicum]
Length = 323
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 5/107 (4%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V K +YVGGL+E+V+ ++ AAFIPFGDI + P+D T+KHR F FV F E EDA+
Sbjct: 17 VNKRVIYVGGLSEQVDVPLVRAAFIPFGDIVSINMPMDYQTEKHRGFAFVEFEEVEDAMS 76
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +E++GR + VN A P RI+ +GW ++P+W+D + W ++
Sbjct: 77 AIDNMNESEIFGRTIRVNVARPVRIR---EGW-SRPVWSD-ENWLKK 118
>gi|256088546|ref|XP_002580392.1| PPIase E; cyclophilin E; peptidyl-prolyl cis-trans isomerase
(PPIase) E; rotamase E [Schistosoma mansoni]
gi|360044542|emb|CCD82090.1| peptidyl-prolyl cis-trans isomerase (PPIase) E [Schistosoma
mansoni]
Length = 329
Score = 112 bits (280), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 76/107 (71%), Gaps = 5/107 (4%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V K +YVGGL+E+V+ ++ AAFIPFGDI + P+D T+KHR F FV F E EDA+
Sbjct: 23 VNKRVIYVGGLSEQVDVPLVRAAFIPFGDIVSINMPMDYQTEKHRGFAFVEFEEVEDAMS 82
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
A+DNM+ +E++GR + VN A P RI+ +GW ++P+W+D + W ++
Sbjct: 83 AIDNMNESEIFGRTIRVNVARPVRIR---EGW-SRPVWSD-ENWLKK 124
>gi|195430772|ref|XP_002063422.1| GK21899 [Drosophila willistoni]
gi|194159507|gb|EDW74408.1| GK21899 [Drosophila willistoni]
Length = 223
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +QKHR F F+ + + EDA A+
Sbjct: 5 KRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYEQFEDAASAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENR 127
DNM+ +EL GR + VN A P R+K E + +P+WAD D W Q+ LQ EN
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWL----QKHAGATLQTENS 115
Query: 128 AAMQAAEEL 136
+ +E++
Sbjct: 116 EETEGSEKV 124
>gi|237832541|ref|XP_002365568.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|211963232|gb|EEA98427.1| peptidyl-prolyl cis-trans isomerase E, putative [Toxoplasma gondii
ME49]
gi|221488019|gb|EEE26233.1| dc50, putative [Toxoplasma gondii GT1]
gi|221508540|gb|EEE34109.1| fuse-binding protein-interacting repressor siahbp1, putative
[Toxoplasma gondii VEG]
Length = 145
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGLAE+V E +L AAF+PFGDIK ++ P D+ T HR FGFV F E++DA +AM
Sbjct: 20 KRTLYVGGLAEQVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFVEFEEEDDAKEAM 79
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEM 119
+NMD AELYGR L VN + R G G + IW+D D +F ++ +++ M
Sbjct: 80 ENMDNAELYGRTLRVNLS---RSGGFAPGSRNKAIWSD-DFFFRQEMKKKGM 127
>gi|312370863|gb|EFR19173.1| hypothetical protein AND_22952 [Anopheles darlingi]
Length = 259
Score = 111 bits (278), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 74/110 (67%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
++ K T+Y+GGL+EEV + ++ AFIPFGD+ D++ P+D +QKHR F F+ F EDA
Sbjct: 1 MSNDKRTVYIGGLSEEVTDKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P+RIK G +P+WAD D W ++
Sbjct: 61 AAAVDNMNDSELCGRTIRVNTARPQRIKEGSN----RPVWAD-DNWLQQH 105
>gi|196008179|ref|XP_002113955.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582974|gb|EDV23045.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 281
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 9/128 (7%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MAN K TLYVGGLAEEV+E +LH+ IPFGDI DV+ P+D TQK+R FGFV F +
Sbjct: 1 MAN----KRTLYVGGLAEEVDEKVLHSLLIPFGDIVDVQIPMDYTTQKNRGFGFVEFEQA 56
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
E+A AMDNMD AELYGR + VN A P RIK G ++ +W++ D+W + +
Sbjct: 57 EEAAAAMDNMDEAELYGRTIRVNIAKPMRIKEG----YSRAVWSE-DSWLKEHAGIATAE 111
Query: 121 RLQAENRA 128
A+ R+
Sbjct: 112 ETDAKRRS 119
>gi|195335275|ref|XP_002034300.1| GM21798 [Drosophila sechellia]
gi|194126270|gb|EDW48313.1| GM21798 [Drosophila sechellia]
Length = 301
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D +Q+HR F F+ + + EDA AM
Sbjct: 5 KRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAM 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +PIWAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPIWAD-DDWLQKH 105
>gi|156540750|ref|XP_001599717.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like, partial
[Nasonia vitripennis]
Length = 247
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 73/103 (70%), Gaps = 5/103 (4%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GGLAEEV+E IL+AAFIPFG+I DV+ PLD ++KHR F F+ F EDA A+DNM+ +
Sbjct: 1 GGLAEEVDEKILNAAFIPFGEIVDVQIPLDYESEKHRGFAFIEFEAAEDAASAIDNMNDS 60
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQE 116
EL+GR + VN A P++IK G +++P+WAD D W + E
Sbjct: 61 ELFGRTIRVNIAKPQKIKEG----SSKPVWAD-DVWLQEHAGE 98
>gi|313245429|emb|CBY40163.1| unnamed protein product [Oikopleura dioica]
Length = 94
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/87 (60%), Positives = 62/87 (71%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGLAEEV+E ++HAAFIPFGDI D+ PLD T+ HR F FV + E DA A
Sbjct: 5 NKKLLYVGGLAEEVDEKMVHAAFIPFGDIIDITVPLDFETEAHRGFAFVEYKETGDAASA 64
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGG 93
MDNMD AEL+GR L VN A P ++K G
Sbjct: 65 MDNMDDAELFGRTLKVNIARPIKMKTG 91
>gi|121543726|gb|ABM55548.1| putative peptidyl-prolyl cis-trans isomerase E [Maconellicoccus
hirsutus]
Length = 291
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 82/118 (69%), Gaps = 7/118 (5%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
++ K T+YVGGLA+E++E IL+ F+ FGDI D++ PLD T+KHR F F+ F EDA
Sbjct: 3 SIAKRTIYVGGLADELDEKILNNVFLTFGDILDIQIPLDYETEKHRGFAFIEFEAPEDAA 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ--QQEEEMQ 120
A+DNM+ +EL+GR + VN A P+++K G + + +WAD D+W ++ + EEE++
Sbjct: 63 AAIDNMNESELFGRTMRVNLAKPQKVKEG----STKAVWAD-DSWLQKYAGKTEEELK 115
>gi|380798461|gb|AFE71106.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
gi|380798463|gb|AFE71107.1| peptidyl-prolyl cis-trans isomerase E isoform 1, partial [Macaca
mulatta]
Length = 290
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 71/98 (72%), Gaps = 5/98 (5%)
Query: 15 GLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAE 74
GLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A+DNM+ +E
Sbjct: 1 GLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNMNESE 60
Query: 75 LYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
L+GR + VN A P RIK G +++P+W+D D W ++
Sbjct: 61 LFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 93
>gi|302761862|ref|XP_002964353.1| hypothetical protein SELMODRAFT_69780 [Selaginella moellendorffii]
gi|300168082|gb|EFJ34686.1| hypothetical protein SELMODRAFT_69780 [Selaginella moellendorffii]
Length = 85
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 69/85 (81%)
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
MDNM +EL+ ++LTVNYA P +IKG EQGWA+QPIWADADTWFER+Q+E EM++L+AE
Sbjct: 1 MDNMHNSELFRKLLTVNYAQPMKIKGREQGWASQPIWADADTWFERKQRELEMKKLKAEQ 60
Query: 127 RAAMQAAEELHRKKMAEDREGEKEE 151
A ++AA+E RKK+ + EGE EE
Sbjct: 61 DATVKAAQEAERKKLLDALEGEVEE 85
>gi|170046410|ref|XP_001850759.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
gi|167869182|gb|EDS32565.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
Length = 308
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 76/110 (69%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K T+YVGGL++EV E +++ AFIPFGD+ D++ P+D +QKHR F F+ F EDA
Sbjct: 1 MANDKRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFENAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P+RIK G +P+W++ D+W ++
Sbjct: 61 AAAVDNMNDSELCGRTVRVNVAKPQRIKEGSN----KPVWSE-DSWLQQH 105
>gi|289742363|gb|ADD19929.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Glossina
morsitans morsitans]
Length = 305
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+Y+G LA+EV E +L+ AFIPFGDI D++ P+D +QKHR F F+ + EDA A+
Sbjct: 6 KRTVYIGSLADEVTEKLLNNAFIPFGDIADIQIPVDYESQKHRGFAFIEYESAEDAASAI 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K G + +P+WAD D W ++
Sbjct: 66 DNMNDSELCGRTIRVNLAKPVRVKEG----SFKPVWAD-DEWLQKH 106
>gi|195123191|ref|XP_002006092.1| GI20843 [Drosophila mojavensis]
gi|193911160|gb|EDW10027.1| GI20843 [Drosophila mojavensis]
Length = 303
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +QKHR F F+ + EDA A+
Sbjct: 5 KRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDAASAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|195025318|ref|XP_001986035.1| GH20760 [Drosophila grimshawi]
gi|193902035|gb|EDW00902.1| GH20760 [Drosophila grimshawi]
Length = 304
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
++ K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +QKHR F F+ + EDA
Sbjct: 1 MSNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 61 ASAIDNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|195382061|ref|XP_002049750.1| GJ20579 [Drosophila virilis]
gi|194144547|gb|EDW60943.1| GJ20579 [Drosophila virilis]
Length = 302
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
++ K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +QKHR F F+ + EDA
Sbjct: 1 MSNDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQKHRGFAFIEYENYEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 61 ASAIDNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|195150527|ref|XP_002016202.1| GL11464 [Drosophila persimilis]
gi|194110049|gb|EDW32092.1| GL11464 [Drosophila persimilis]
Length = 302
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +Q+HR F F+ + + EDA A+
Sbjct: 5 KRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAASAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|324522371|gb|ADY48048.1| Peptidyl-prolyl cis-trans isomerase E, partial [Ascaris suum]
Length = 314
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEV+E ILHA F+PFGDI + P+D T KHR FGFV F EDA A
Sbjct: 11 RKRTLYVGGFGEEVDEKILHAGFLPFGDIVGISIPMDYETGKHRGFGFVEFELAEDAAAA 70
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
+DNM+ +E++GR + N+A P + Q +P+WAD D W +
Sbjct: 71 IDNMNDSEMFGRTIRCNFARPPKANERSQ----RPVWAD-DEWLK 110
>gi|125808073|ref|XP_001360625.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
gi|54635797|gb|EAL25200.1| GA18502 [Drosophila pseudoobscura pseudoobscura]
Length = 302
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 74/106 (69%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +Q+HR F F+ + + EDA A+
Sbjct: 5 KRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQAEDAASAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|17647301|ref|NP_523773.1| cyclophilin-33 [Drosophila melanogaster]
gi|13124101|sp|Q9V3G3.1|PPIE_DROME RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin 33; AltName:
Full=Cyclophilin E; AltName: Full=Rotamase E
gi|6007764|gb|AAF01031.1|AF182826_1 cyclophilin-33 [Drosophila melanogaster]
gi|7302761|gb|AAF57839.1| cyclophilin-33 [Drosophila melanogaster]
gi|16769500|gb|AAL28969.1| LD35248p [Drosophila melanogaster]
gi|220954214|gb|ACL89650.1| cyp33-PA [synthetic construct]
Length = 300
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D +Q+HR F F+ + + EDA A+
Sbjct: 5 KRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +PIWAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPIWAD-DDWLQKH 105
>gi|195584258|ref|XP_002081931.1| GD11288 [Drosophila simulans]
gi|194193940|gb|EDX07516.1| GD11288 [Drosophila simulans]
Length = 301
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D +Q+HR F F+ + + EDA A+
Sbjct: 5 KRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAI 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL GR + VN A P R+K E + +PIWAD D W ++
Sbjct: 65 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPIWAD-DDWLQKH 105
>gi|195487862|ref|XP_002092072.1| GE11871 [Drosophila yakuba]
gi|194178173|gb|EDW91784.1| GE11871 [Drosophila yakuba]
Length = 300
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D +Q+HR F F+ + + EDA
Sbjct: 1 MANDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 61 AAAIDNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|391330532|ref|XP_003739714.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Metaseiulus occidentalis]
Length = 324
Score = 109 bits (272), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K +YVGGLAEEV+E +L AAF PFGDI ++ PLD +KHR F F+ F EDA A
Sbjct: 19 NKKLIYVGGLAEEVDENVLRAAFNPFGDINGIQIPLDYEXEKHRGFAFIEFELAEDAAAA 78
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
MDNM+ EL+GR + VN A P IK G +++P+W+D D W +
Sbjct: 79 MDNMNDGELFGRTIRVNLAKPMAIKDG----SSRPVWSD-DQWLSKH 120
>gi|194756974|ref|XP_001960745.1| GF11346 [Drosophila ananassae]
gi|190622043|gb|EDV37567.1| GF11346 [Drosophila ananassae]
Length = 394
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 89/149 (59%), Gaps = 14/149 (9%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGLA+EV E +L+ AFIPFGDI D++ P+D +Q+HR F F+ + + EDA A+
Sbjct: 99 KRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPVDYESQRHRGFAFIEYEQGEDAASAI 158
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQ---------QEEE 118
DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++ EEE
Sbjct: 159 DNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKHAGATLQPEGGPEEE 213
Query: 119 MQRLQAENRAAMQAAEELHRKKMAEDREG 147
+ A ++ AE+ + + + R G
Sbjct: 214 KTETPSTGPAVIEKAEKRNPQVFFDVRIG 242
>gi|194880756|ref|XP_001974528.1| GG21795 [Drosophila erecta]
gi|190657715|gb|EDV54928.1| GG21795 [Drosophila erecta]
Length = 300
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 75/110 (68%), Gaps = 5/110 (4%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A K T+YVGGLA+EV E +L+ AFIPFGDI D++ P D +Q+HR F F+ + + EDA
Sbjct: 1 MANDKRTVYVGGLADEVTERLLNNAFIPFGDIADIQMPADFESQRHRGFAFIEYEQSEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
A+DNM+ +EL GR + VN A P R+K E + +P+WAD D W ++
Sbjct: 61 AAAIDNMNDSELCGRTIRVNLAKPVRVK--EDSF--KPVWAD-DDWLQKH 105
>gi|170594273|ref|XP_001901888.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
gi|158590832|gb|EDP29447.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, Bmcyp-13
[Brugia malayi]
Length = 316
Score = 108 bits (270), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEVNE IL A FIPFG+I + PLD T KHR FGFV + EDA A
Sbjct: 11 KKRTLYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAA 70
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
+DNM+ +EL+GR + N+A P + Q +P+WAD D W +
Sbjct: 71 IDNMNDSELFGRTIRCNFARPPKANERSQ----RPVWAD-DEWLK 110
>gi|402586187|gb|EJW80125.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase-13, partial
[Wuchereria bancrofti]
Length = 187
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEVNE IL A FIPFG+I + PLD T KHR FGFV + EDA A
Sbjct: 11 KKRTLYVGGFGEEVNEKILQAGFIPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAA 70
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
+DNM+ +EL+GR + N+A P + Q +P+WAD D W +
Sbjct: 71 IDNMNDSELFGRTIRCNFARPPKANERSQ----RPVWAD-DEWLK 110
>gi|341886179|gb|EGT42114.1| CBN-CYN-13 protein [Caenorhabditis brenneri]
Length = 334
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 83/138 (60%), Gaps = 11/138 (7%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEV E +L AAFIPFGD+ + P+D T KHR FGFV F EDA A
Sbjct: 9 RKRTLYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYETGKHRGFGFVEFDMAEDAAMA 68
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQ------EEEMQ 120
+DNM+ +EL+G+ + VN+A P + Q +P+WAD D W ++ + E++ +
Sbjct: 69 IDNMNESELFGKTIRVNFARPPKATERSQ----KPVWAD-DEWLKKYGRGGEAAGEDDAE 123
Query: 121 RLQAENRAAMQAAEELHR 138
+ ++++ A +L R
Sbjct: 124 QSLSDSKETTSTATKLPR 141
>gi|452821788|gb|EME28814.1| hypothetical protein Gasu_37050 [Galdieria sulphuraria]
Length = 124
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ +LYVGGL +V E IL AAF+PFGD+ DV PLD TQ+HR F F+ F EDA A
Sbjct: 3 RRSLYVGGLDPQVTEEILWAAFVPFGDLLDVTMPLDNETQQHRGFAFIEFELPEDAASAK 62
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
+NMD +E++GR L V Y P I G +P+WAD D W Q
Sbjct: 63 ENMDDSEMFGRRLRVAYTRPSSIGAG------KPLWADTDEWLAYQ 102
>gi|58803060|gb|AAW82658.1| cyclophilin [Haemonchus contortus]
Length = 324
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 5/126 (3%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEV E +L AAFI FGDI + P+D T KHR FGFV F EDA A
Sbjct: 10 KKRTLYVGGFGEEVTEKVLMAAFITFGDIVAISIPMDYETGKHRGFGFVEFELAEDAAAA 69
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
+DNM+ +EL+GR + N+A P K E+ +++P+WAD D W +R + + + N
Sbjct: 70 IDNMNESELFGRTIRCNFARPP--KATER--SSRPVWAD-DEWLKRYGKGSGIADAKESN 124
Query: 127 RAAMQA 132
+A A
Sbjct: 125 GSASTA 130
>gi|320166644|gb|EFW43543.1| peptidyl-prolyl cis-trans isomerase E [Capsaspora owczarzaki ATCC
30864]
Length = 343
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 85/138 (61%), Gaps = 18/138 (13%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
++ K LYVGGLAEEV+ +L AAFIPFGD+ DV+ P+D +T KHR FGFV F + EDA
Sbjct: 1 MSSTKKVLYVGGLAEEVDIPMLTAAFIPFGDLVDVQMPMDYSTDKHRGFGFVEFEDAEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYA----LPERIKGGEQGWAAQPIWADADTWFERQQQEE-- 117
A+DNMD AEL+GR + VN A PER A + +W + +++FE+QQQE
Sbjct: 61 AAAIDNMDEAELFGRTIRVNVANPAKYPER--------ANKAVWTE-ESYFEQQQQEHAS 111
Query: 118 ---EMQRLQAENRAAMQA 132
A RAA QA
Sbjct: 112 NDATATETNASARAAWQA 129
>gi|312066701|ref|XP_003136395.1| cytosolic cyclophilin [Loa loa]
gi|307768442|gb|EFO27676.1| cytosolic cyclophilin [Loa loa]
Length = 322
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEVNE +L A F+PFG+I + PLD T KHR FGFV + EDA A
Sbjct: 11 KKRTLYVGGFGEEVNEKVLQAGFVPFGEIVSISIPLDYETGKHRGFGFVEYELAEDAAAA 70
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
+DNM+ +EL+GR + N+A P + Q +P+WAD D W +
Sbjct: 71 IDNMNDSELFGRTIRCNFARPPKANERSQ----RPVWAD-DEWLK 110
>gi|300193098|pdb|2KU7|A Chain A, Solution Structure Of Mll1 Phd3-Cyp33 Rrm Chimeric Protein
Length = 140
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 60/81 (74%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 60 ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 119
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+DNM+ +EL+GR + VN A
Sbjct: 120 AAIDNMNESELFGRTIRVNLA 140
>gi|295982539|pdb|3MDF|A Chain A, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
gi|295982540|pdb|3MDF|B Chain B, Crystal Structure Of The Rrm Domain Of Cyclophilin 33
Length = 85
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/84 (58%), Positives = 62/84 (73%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
++A K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F E
Sbjct: 1 GSMATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAE 60
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA A+DNM+ +EL+GR + VN A
Sbjct: 61 DAAAAIDNMNESELFGRTIRVNLA 84
>gi|221115228|ref|XP_002154334.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E-like [Hydra
magnipapillata]
Length = 297
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 71/110 (64%), Gaps = 9/110 (8%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MAN K +Y+GGLAEEV E ILHAAFIPFGDI DV P+D T KHR F F+ F
Sbjct: 1 MAN----KKMIYIGGLAEEVEEKILHAAFIPFGDIIDVNIPIDYETSKHRGFAFMEFELA 56
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF 110
EDA A+DNM+ +ELYGR + VN A P +K E A++ IW+ D W
Sbjct: 57 EDAAAAIDNMNESELYGRTIRVNLAKP--MKNPES--ASRGIWS-TDEWL 101
>gi|308482576|ref|XP_003103491.1| CRE-CYN-13 protein [Caenorhabditis remanei]
gi|308259912|gb|EFP03865.1| CRE-CYN-13 protein [Caenorhabditis remanei]
Length = 337
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG EEV E +L AAFIPFGD+ + P+D + KHR FGFV F EDA A
Sbjct: 9 RKRTLYVGGFTEEVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+DNM+ +EL+G+ + VN+A P + Q +P+WAD D W ++
Sbjct: 69 IDNMNESELFGKTIRVNFARPPKATERSQ----KPVWAD-DEWLKK 109
>gi|302769031|ref|XP_002967935.1| hypothetical protein SELMODRAFT_69781 [Selaginella moellendorffii]
gi|300164673|gb|EFJ31282.1| hypothetical protein SELMODRAFT_69781 [Selaginella moellendorffii]
Length = 83
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
MDNM +EL+ ++LTVNY P +IKG EQGWA+QPIWADADTWFERQQ+E EM++L+AE
Sbjct: 1 MDNMHNSELFHKLLTVNYPQPMKIKGREQGWASQPIWADADTWFERQQRELEMKKLKAEQ 60
Query: 127 RAAMQAAEELHRKKMAEDREGEKEE 151
A ++AA+E RKK+ EGE EE
Sbjct: 61 DATVKAAQEAERKKLF--LEGEVEE 83
>gi|387219601|gb|AFJ69509.1| hypothetical protein NGATSA_3028200 [Nannochloropsis gaditana
CCMP526]
Length = 134
Score = 105 bits (263), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/111 (50%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K+ +YVGGL E+ E +LHAAFIPFGDI +V P D R FGFV F EDA A+
Sbjct: 11 KSIVYVGGLDEQCTEEMLHAAFIPFGDIVEVNIPKDFKENTTRGFGFVHFESAEDAAAAI 70
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEE 118
DNM+GAEL GRVL N A P + K G A +P+W+ D WF+ Q E++
Sbjct: 71 DNMEGAELLGRVLKCNVARPMQHKLG----ANKPVWS-TDEWFKSQLAEDK 116
>gi|260787321|ref|XP_002588702.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
gi|229273870|gb|EEN44713.1| hypothetical protein BRAFLDRAFT_287419 [Branchiostoma floridae]
Length = 304
Score = 105 bits (262), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
+ GGLAEEV+E +LHAAFIPFGD+ D+ PLD TQKHR F FV F EDA A+DNM
Sbjct: 4 FPGGLAEEVDEKVLHAAFIPFGDLVDINIPLDYETQKHRGFAFVEFEGAEDAAAAIDNMH 63
Query: 72 GAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+EL+GR + N A P ++K G + + +W++ D+W ++
Sbjct: 64 ESELFGRTIRCNLAKPMKLKEG----SMKAVWSE-DSWLKK 99
>gi|268534532|ref|XP_002632397.1| C. briggsae CBR-CYN-13 protein [Caenorhabditis briggsae]
Length = 332
Score = 105 bits (262), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG +E+V E +L AAFIPFGD+ + P+D + KHR FGFV F EDA A
Sbjct: 9 RKRTLYVGGFSEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+DNM+ +EL+G+ + VN+A P + Q +P+WAD D W ++
Sbjct: 69 IDNMNESELFGKTIRVNFARPPKATERSQ----KPVWAD-DEWLKK 109
>gi|392902210|ref|NP_001255925.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
gi|5832813|emb|CAB55151.1| Protein CYN-13, isoform a [Caenorhabditis elegans]
Length = 331
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K TLYVGG E+V E +L AAFIPFGD+ + P+D + KHR FGFV F EDA A
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+DNM+ +EL+G+ + VN+A P + Q +P+WAD D W ++
Sbjct: 69 IDNMNESELFGKTIRVNFARPPKATERSQ----KPVWAD-DEWLKK 109
>gi|304445488|pdb|2KYX|A Chain A, Solution Structure Of The Rrm Domain Of Cyp33
Length = 83
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 60/81 (74%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA
Sbjct: 2 STTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 61
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+DNM+ +EL+GR + VN A
Sbjct: 62 AAIDNMNESELFGRTIRVNLA 82
>gi|300193226|pdb|3LPY|A Chain A, Crystal Structure Of The Rrm Domain Of Cyp33
gi|300193227|pdb|3LPY|B Chain B, Crystal Structure Of The Rrm Domain Of Cyp33
Length = 79
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 59/79 (74%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGLAEEV++ +LHAAFIPFGDI D++ PLD T+KHR F FV F EDA A
Sbjct: 1 SKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAA 60
Query: 67 MDNMDGAELYGRVLTVNYA 85
+DNM+ +EL+GR + VN A
Sbjct: 61 IDNMNESELFGRTIRVNLA 79
>gi|401409123|ref|XP_003884010.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
gi|325118427|emb|CBZ53978.1| putative peptidyl-prolyl cis-trans isomerase E [Neospora caninum
Liverpool]
Length = 145
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/112 (51%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGLAEEV E +L AAF+PFGDIK ++ P D+ T HR FGF+ F E++DA +AM
Sbjct: 20 KRTLYVGGLAEEVEEEVLRAAFLPFGDIKQLEIPKDKTTGLHRGFGFIEFEEEDDAKEAM 79
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEM 119
+NMD AELYGR L VN + R G G + IW+D D +F ++ +++ M
Sbjct: 80 ENMDNAELYGRTLRVNLS---RSGGFAPGSRNKAIWSD-DFFFRQEMKKKGM 127
>gi|348688369|gb|EGZ28183.1| hypothetical protein PHYSODRAFT_470319 [Phytophthora sojae]
Length = 120
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 69/100 (69%), Gaps = 4/100 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL ++V E L+ AF+PFG IK V+ P+D +TQ+ + FGFV F ++ DA A+
Sbjct: 7 KRALYVGGLDKQVTEQGLYTAFVPFGPIKGVQIPMDYSTQRSKGFGFVEFEDEADARAAI 66
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
DNMD +EL+G+ L V+ A P+R K G +P+WA+AD
Sbjct: 67 DNMDESELFGKTLRVSIAKPDRPKLGSN----KPVWAEAD 102
>gi|223993321|ref|XP_002286344.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977659|gb|EED95985.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 140
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 9/126 (7%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ LY+GGL V E L AAF+PFG I+ + P+D A H+ F F+ F+E +DA +A+
Sbjct: 10 RRALYIGGLDPAVTETTLRAAFLPFGPIQHIDMPMDYAAGTHKGFAFLEFVEADDANEAI 69
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ----QQEEEMQRLQ 123
NMDG+EL+G+ LTVN A E++K G +++ +W+ + WF+ Q + EE+ ++L+
Sbjct: 70 YNMDGSELFGKSLTVNVAQAEKMKLG----SSKAVWS-TEEWFKEQAGVKEDEEKQEKLK 124
Query: 124 AENRAA 129
E R A
Sbjct: 125 GEERDA 130
>gi|301117380|ref|XP_002906418.1| peptidyl-prolyl cis-trans isomerase E, putative [Phytophthora
infestans T30-4]
gi|262107767|gb|EEY65819.1| peptidyl-prolyl cis-trans isomerase E, putative [Phytophthora
infestans T30-4]
Length = 117
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 66/100 (66%), Gaps = 4/100 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL +V E L+ AF+PFG IK V+ PLD +Q+ + FGFV F E+ DA A+
Sbjct: 6 KRALYVGGLDNQVTEQGLYTAFVPFGPIKSVQIPLDYHSQRGKGFGFVEFEEEADARAAI 65
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
DNMD +EL+G+ L V A P+R K G +P+WA+AD
Sbjct: 66 DNMDESELFGKTLRVTIAKPDRPKLGSN----KPVWAEAD 101
>gi|157115630|ref|XP_001658271.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108876827|gb|EAT41052.1| AAEL007273-PA [Aedes aegypti]
Length = 303
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVGGL++EV E +++ AFIPFGD+ D++ P+D +QKHR F F+ F EDA A+
Sbjct: 5 KRTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAAAAV 64
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DNM+ +EL +VN A P+RIK G +P+WA+ DTW ++
Sbjct: 65 DNMNDSELCVD-HSVNIAKPQRIKEGSN----KPVWAE-DTWLQQH 104
>gi|321462371|gb|EFX73395.1| hypothetical protein DAPPUDRAFT_307711 [Daphnia pulex]
Length = 313
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 85/132 (64%), Gaps = 8/132 (6%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD-QATQKHRSFGFVTFLEKEDAIQA 66
K +YVGGL +E +E+++ AAFIPFG+I +++ P D + +KHR F F+ + EDA A
Sbjct: 7 KRNIYVGGLPDEADESVVRAAFIPFGEIVNIEIPPDYENHEKHRGFSFIEYELAEDAAAA 66
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ--QQEEEMQRLQA 124
+DNM+ +EL+G+ +TVN A P +IK G ++P+W++ D+W ++ + EE ++
Sbjct: 67 IDNMNDSELFGKTITVNIARPRKIKEG----YSRPVWSE-DSWLQKYAGKTEENKNPVEE 121
Query: 125 ENRAAMQAAEEL 136
N+ + + + +
Sbjct: 122 NNKESTEGKDNV 133
>gi|449299089|gb|EMC95103.1| hypothetical protein BAUCODRAFT_123579 [Baudoinia compniacensis
UAMH 10762]
Length = 145
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M++ + Q+ T+YVGGL +V LH AFIPFG++ DV P L +T+ HR FG+V F
Sbjct: 1 MSDQSRQRATVYVGGLDGQVTTQTLHDAFIPFGEVVDVSLPKPELASSTEPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMD +ELYGRV+ VN A P+R
Sbjct: 61 ALPEDAREAIDNMDQSELYGRVIKVNQAKPQR 92
>gi|398411624|ref|XP_003857150.1| hypothetical protein MYCGRDRAFT_66798 [Zymoseptoria tritici
IPO323]
gi|339477035|gb|EGP92126.1| hypothetical protein MYCGRDRAFT_66798 [Zymoseptoria tritici
IPO323]
Length = 147
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP-LDQATQK--HRSFGFVTF 57
MA + K+T+YVGGL +VN +LH AFIPFG+I DV P +Q + + HR FG+V F
Sbjct: 1 MAETSRHKSTVYVGGLDNQVNAQVLHDAFIPFGEIVDVSLPKPEQQSNRDPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMD AELYGRV+ VN A P++
Sbjct: 61 SLAEDAREAIDNMDQAELYGRVIKVNQAKPQK 92
>gi|452846936|gb|EME48868.1| hypothetical protein DOTSEDRAFT_58159 [Dothistroma septosporum
NZE10]
Length = 149
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/92 (51%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M +LA QK+T++VGGL +VNE LH AF+PFG+I +V P L HR FG+V F
Sbjct: 1 MGDLARQKSTVFVGGLDSQVNENTLHDAFVPFGEIVEVSLPKPELKSNHDPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNM+ +ELYGRV+ VN A P++
Sbjct: 61 SLAEDAREAIDNMNQSELYGRVIKVNQAKPQK 92
>gi|452989179|gb|EME88934.1| hypothetical protein MYCFIDRAFT_25441 [Pseudocercospora fijiensis
CIRAD86]
Length = 149
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + A QK T++VGGL +V+E LH AFIPFG+I DV P L HR FG+V F
Sbjct: 1 MTDTARQKKTVFVGGLDSQVSEQTLHDAFIPFGEIVDVSLPKPELASNKDPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMD +ELYGRV+ VN A P++
Sbjct: 61 SLAEDAREAIDNMDQSELYGRVIKVNQAKPQK 92
>gi|399216695|emb|CCF73382.1| unnamed protein product [Babesia microti strain RI]
Length = 135
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 69/103 (66%), Gaps = 1/103 (0%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K TL+V GLAE V + +L+AAFIP+G+I+ ++ PLD+ T KH+ FGFV F E EDA A
Sbjct: 8 SKRTLFVRGLAEGVTKEVLYAAFIPYGEIRHLEVPLDKTTGKHKGFGFVEFEEGEDASHA 67
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTW 109
+ N + +ELYG+VL V Y+ + ++ + + IWAD + +
Sbjct: 68 VFNRNNSELYGKVLRVTYSTHADVY-EKKSYKNKAIWADPEYY 109
>gi|428175470|gb|EKX44360.1| hypothetical protein GUITHDRAFT_50524, partial [Guillardia theta
CCMP2712]
Length = 81
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 56/80 (70%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVGGL EEVN L AAFIPFG++ DV PLD T KHR FGFV + +DA +A+
Sbjct: 1 KRTLYVGGLDEEVNVDTLRAAFIPFGELVDVNIPLDNETGKHRGFGFVEYEFPDDAAEAI 60
Query: 68 DNMDGAELYGRVLTVNYALP 87
NM+ EL GRVL+VN A P
Sbjct: 61 FNMNNGELNGRVLSVNLAKP 80
>gi|341038578|gb|EGS23570.1| putative cyclophilin protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 153
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 15/148 (10%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ-----ATQKHRSFGFV 55
M++ A K T+YVGGLA V +LH AF+PFG+I ++ P ++ +T+ HR F +V
Sbjct: 1 MSDAARWKATVYVGGLAPAVTATVLHEAFLPFGEIAEINLPRNENPNTASTEPHRGFAYV 60
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQ 115
F + EDA +A+DNMD +EL+GRV+ V+ A P + G QG ++ + + W
Sbjct: 61 EFEDPEDAKEAIDNMDQSELFGRVIKVSAAKPPKSAG--QGLGSKTAVWEQEGWLAEHAV 118
Query: 116 EEEMQRLQAE-------NRAAMQAAEEL 136
EE RL AE N MQ E+L
Sbjct: 119 SEE-DRLAAERAKNARPNEDPMQGLEDL 145
>gi|440792810|gb|ELR14018.1| peptidylprolyl cis-trans isomerase e, ppie, putative [Acanthamoeba
castellanii str. Neff]
Length = 131
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 58/92 (63%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+YVGGLA+EV E L AAFIPFG+I DV P++ K+R FGFV F +EDA+ A +N
Sbjct: 12 VIYVGGLADEVTEETLKAAFIPFGEIVDVMIPMNYEQNKNRGFGFVEFEVREDAMAAQEN 71
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQP 101
M EL+G+VL+VN A I W + P
Sbjct: 72 MHNGELFGKVLSVNLARARNIDKNRAVWESNP 103
>gi|453089444|gb|EMF17484.1| peptidyl prolyl cis-trans isomerase cyclophilin [Mycosphaerella
populorum SO2202]
Length = 156
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M ++ Q T++VGGL ++V + LH AFIPFGDI DV P L HR FG+V F
Sbjct: 1 MTDVTKQIKTVFVGGLDQQVTQQTLHDAFIPFGDITDVSLPKPELASNKDPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMD +ELYGRV+ VN A P++
Sbjct: 61 SLAEDAREAIDNMDQSELYGRVIKVNQAKPQK 92
>gi|440635808|gb|ELR05727.1| hypothetical protein GMDG_07570 [Geomyces destructans 20631-21]
Length = 152
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/92 (52%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M A K T+YVGGLA V+ A LHAAFIPFG+I V P +A T HR FG+V F
Sbjct: 1 MTEQARLKGTVYVGGLAPVVDAASLHAAFIPFGEIVGVSLPKPEAPLSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ DA++A+DNMD AEL+GRV+ V+ A P++
Sbjct: 61 EDPSDALEAIDNMDQAELFGRVIKVSAAKPQK 92
>gi|167521049|ref|XP_001744863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776477|gb|EDQ90096.1| predicted protein [Monosiga brevicollis MX1]
Length = 307
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
L K LYVGGLAEEV E +L AF+PFGDI +++ PLD TQ H+ F F+ + EDA
Sbjct: 3 LKANKRMLYVGGLAEEVTEEVLRDAFVPFGDILELQLPLDFQTQDHKGFAFIEYATLEDA 62
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
A+DNM +ELYGR L VN A R A+P+W
Sbjct: 63 EAAIDNMHESELYGRTLRVNVANVTRNLN-----LAKPLW 97
>gi|443715198|gb|ELU07293.1| hypothetical protein CAPTEDRAFT_153839 [Capitella teleta]
Length = 291
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 24 ILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVN 83
+L+AAFIPFGDI DV+ PLD T+KHR F FV F ED A+DNM+ AELYGR + VN
Sbjct: 1 MLNAAFIPFGDILDVQIPLDYETEKHRGFAFVEFETVEDCSAAIDNMNDAELYGRTIRVN 60
Query: 84 YALPERIKGGEQGWAAQPIWADAD 107
A P++ + G +++PIW D D
Sbjct: 61 LAKPQKYREG----SSRPIWEDDD 80
>gi|66806147|ref|XP_636795.1| hypothetical protein DDB_G0288291 [Dictyostelium discoideum AX4]
gi|60465191|gb|EAL63288.1| hypothetical protein DDB_G0288291 [Dictyostelium discoideum AX4]
Length = 123
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+KN LYVGG++++V IL AAFIPFG+I DV P+D TQK + FGF+ F EDA A
Sbjct: 13 KKNVLYVGGISDDVTIDILRAAFIPFGNINDVILPMDHKTQKLKGFGFIDFELPEDAADA 72
Query: 67 MDNMDGAELYGRVLTVNYALPER 89
+DNM +E++GRV+ + A P +
Sbjct: 73 LDNMHESEIFGRVIKCSIAKPIK 95
>gi|330794131|ref|XP_003285134.1| hypothetical protein DICPUDRAFT_76077 [Dictyostelium purpureum]
gi|325084960|gb|EGC38377.1| hypothetical protein DICPUDRAFT_76077 [Dictyostelium purpureum]
Length = 116
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 53/81 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+KN +YVGGL E V IL AFIPFG+I D+ P+D TQK + FGFV F EDA A
Sbjct: 7 KKNVIYVGGLDENVTTDILRGAFIPFGNITDINLPIDYKTQKSKGFGFVEFELPEDAADA 66
Query: 67 MDNMDGAELYGRVLTVNYALP 87
+DNM +E+YG+V+ A P
Sbjct: 67 LDNMHESEIYGKVINCTIAKP 87
>gi|406859758|gb|EKD12821.1| nuclear cap-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 153
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTF 57
M++ A K T+YVGGLA VN A LHAAF+PFG+I DV P +T+ HR FG+V F
Sbjct: 1 MSDQARWKATVYVGGLAPMVNAANLHAAFLPFGEIADVSLPKPAGPNSTELHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ ED A+DNM+GAEL+G+ + V+ A P +
Sbjct: 61 EDSEDTKDAIDNMEGAELFGKPIKVSAAKPPK 92
>gi|402084168|gb|EJT79186.1| nuclear cap-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 154
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 70/114 (61%), Gaps = 14/114 (12%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTFLEKEDAI 64
K TLYVGGL+ V A +H AFIPFG+I DVK P + ++ + HR F +V F + +DA
Sbjct: 8 KATLYVGGLSNLVTAATIHDAFIPFGEIADVKLPKNDNPKSAETHRGFAYVEFEDADDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPERI--KGG---------EQGWAAQPIWADAD 107
+AMDNMD AEL+GR++ V+ A P + +GG ++GW AQ D D
Sbjct: 68 EAMDNMDQAELFGRIIKVHAAKPPKSTQEGGLGSRTAVWEQEGWIAQNAVGDED 121
>gi|300122032|emb|CBK22606.2| unnamed protein product [Blastocystis hominis]
Length = 119
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 69/106 (65%), Gaps = 5/106 (4%)
Query: 3 NLAVQKNTLY-VGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
++ +Q + +Y +GGL ++V+E +L F+PFG++K+V PLD T R FGFV F + E
Sbjct: 2 SVCLQTSLVYRIGGLDDQVDEQVLLGVFVPFGEVKEVTIPLDAGTGLKRGFGFVEFEDAE 61
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
DA +A DNM+ AEL+G+V+ V Y+ R+K + +PIWA D
Sbjct: 62 DAAEARDNMNNAELFGKVIKVTYS--NRMK--PSLISQKPIWAQVD 103
>gi|68076357|ref|XP_680098.1| cyclophilin [Plasmodium berghei strain ANKA]
gi|56500983|emb|CAH98215.1| cyclophilin, putative [Plasmodium berghei]
Length = 134
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVGG+ E +++ L+ F FGDI++++ P++ T KHR F F+ ++EK+DA A+ N
Sbjct: 8 TLYVGGIHETIDKKCLYDIFSSFGDIRNIEIPMNLVTNKHRGFAFIEYVEKDDAKHALYN 67
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
M EL G+++TVNY+ R K +Q +P+W D
Sbjct: 68 MSNFELNGKIITVNYS---RTKKMDQ---YKPVWID 97
>gi|407925101|gb|EKG18122.1| hypothetical protein MPH_04654 [Macrophomina phaseolina MS6]
Length = 152
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL +VN LH AF+PFG+I D+ P L +T HR FG+V F
Sbjct: 1 MSETARLKATVYVGGLDNQVNTRTLHDAFVPFGEIVDISLPKPDLPSSTDPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
DA +A+DNMD +EL+GRV+ V A P++
Sbjct: 61 EHASDAREAIDNMDQSELFGRVIKVAAAKPQK 92
>gi|325186227|emb|CCA20728.1| peptidylprolyl cistrans isomerase E putative [Albugo laibachii
Nc14]
Length = 138
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 64/118 (54%), Gaps = 17/118 (14%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL +V E +LHAAF+PFG IK+++ P D R FGFV + E++DA AM
Sbjct: 7 KKCLYVGGLTRQVTEQVLHAAFVPFGPIKEIQIPSDTEVGASRGFGFVEYEEEDDANDAM 66
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAA-----------------QPIWADADT 108
DNMD +E++G+ L V A R + G + A P+WA+ D
Sbjct: 67 DNMDESEMFGQTLRVCVAKANRAELGSEKPGALLLFTAVDDISLTEVFSLPVWAEVDV 124
>gi|296421340|ref|XP_002840223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636437|emb|CAZ84414.1| unnamed protein product [Tuber melanosporum]
Length = 152
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 5/113 (4%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD--QATQKHRSFGFVTFLEKEDAIQ 65
K+T+++GGL + V + ILH+AF+PFGDI++V+ P D Q HR FG+V F DA+
Sbjct: 8 KSTIFIGGLDQSVTKEILHSAFLPFGDIQEVQLPRDDRQPNTAHRGFGYVEFEAVGDALA 67
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEE 118
A+DNMD A L GRVL V A P+ K G + +WA ++W + + EE
Sbjct: 68 AIDNMDQAVLAGRVLNVMRAKPQ--KEGTVLGSKVAVWAQ-ESWLAKHEVSEE 117
>gi|323453324|gb|EGB09196.1| hypothetical protein AURANDRAFT_17250, partial [Aureococcus
anophagefferens]
Length = 84
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---HRSFGFVTFLEKEDA 63
K LYVGGL EEV E ILHAAFIPFG++ +V P D A++ +R F FV F + DA
Sbjct: 3 NKRILYVGGLTEEVTEEILHAAFIPFGELVEVNIPKDHASKTSDGNRGFAFVEFELEPDA 62
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
+A NMDGAEL+GRVL VN A
Sbjct: 63 DEARFNMDGAELFGRVLRVNVA 84
>gi|154291155|ref|XP_001546163.1| hypothetical protein BC1G_15349 [Botryotinia fuckeliana B05.10]
gi|347441891|emb|CCD34812.1| similar to peptidyl prolyl cis-trans isomerase Cyclophilin
[Botryotinia fuckeliana]
Length = 153
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTF 57
M + A K T+YVGGL+ V A L AAF+PFG+I DV P +T+ HR FG+V F
Sbjct: 1 MTDQARWKATVYVGGLSHMVTTANLEAAFLPFGEIADVSIPKADGPNSTEPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ ED A+DNMD +EL+G+V+ VN A P K +G ++ + + W E
Sbjct: 61 EDPEDTKDAIDNMDQSELFGKVIKVNAAKPP--KNANEGLGSKTALWEQEGWLAENAVSE 118
Query: 118 EMQRLQAENRAAMQ 131
E + + RA +Q
Sbjct: 119 EDKLAAEQARAGVQ 132
>gi|393216824|gb|EJD02314.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 157
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT-------QKHRSFGFVTFLEK 60
K T+++GG+ ++++EA ++ +F FGDI +V+ P Q QKHR F FVT+
Sbjct: 8 KKTVFIGGIGDDIDEAAIYESFSTFGDILEVQIPPAQINTHNREEAQKHRGFAFVTYTSS 67
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
DA A+DNMD EL GRVL VN A P+++ G +PIW +++ W +Q + Q
Sbjct: 68 GDAQDAIDNMDMNELRGRVLRVNLARPQKLTAAVSG--NRPIW-ESEEWL-KQYAKPLAQ 123
Query: 121 RLQAENRAAMQAAEEL 136
+RAA++A +
Sbjct: 124 SGGVGSRAAIRAGASM 139
>gi|328869827|gb|EGG18202.1| hypothetical protein DFA_03689 [Dictyostelium fasciculatum]
Length = 128
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 69/118 (58%), Gaps = 2/118 (1%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+K T+YVGGL E V I+ AAFIPFGDI D+ P D +++ + FV + EDA A
Sbjct: 9 KKKTIYVGGLEESVTVDIITAAFIPFGDIVDIILPNDHKNHRNKGYCFVEYESSEDAADA 68
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQ--EEEMQRL 122
+DNM+ +ELYG+ L A P I + W+ + + + ++Q++ EE+++ +
Sbjct: 69 VDNMNESELYGKTLKCVIAKPNTIDKNKSLWSNEKYLTEQNDELDKQKEFIEEKLKEV 126
>gi|116199523|ref|XP_001225573.1| hypothetical protein CHGG_07917 [Chaetomium globosum CBS 148.51]
gi|88179196|gb|EAQ86664.1| hypothetical protein CHGG_07917 [Chaetomium globosum CBS 148.51]
Length = 152
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 5/90 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ-----ATQKHRSFGFV 55
MA+ + K+T+YVGGLA V + L AF+PFG+I DV P ++ AT+ HR F +V
Sbjct: 1 MADTSRWKSTVYVGGLAPAVTKTTLQEAFLPFGEIADVSLPKNENPSTAATEPHRGFAYV 60
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
F + EDA +A+DNMD AEL+GRV+ V+ A
Sbjct: 61 EFEDVEDAKEAIDNMDQAELFGRVIKVSAA 90
>gi|389640385|ref|XP_003717825.1| nuclear cap-binding protein [Magnaporthe oryzae 70-15]
gi|351640378|gb|EHA48241.1| nuclear cap-binding protein [Magnaporthe oryzae 70-15]
gi|440466342|gb|ELQ35614.1| nuclear cap-binding protein [Magnaporthe oryzae Y34]
gi|440487879|gb|ELQ67644.1| nuclear cap-binding protein [Magnaporthe oryzae P131]
Length = 155
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + + K TLYVGGL EA LH AFIPFG+I DVK P + ++ + HR F +V +
Sbjct: 1 MTDASRWKATLYVGGLPAAATEASLHDAFIPFGEIADVKMPKNDNPKSAETHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA +AMDNMD +E +GR++ V+ A P +
Sbjct: 61 EDADDAKEAMDNMDQSEFFGRIIKVHAAKPPK 92
>gi|258565461|ref|XP_002583475.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907176|gb|EEP81577.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 152
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M++ + KNT+YVGGL + V L AFIPFG+I D+ P L +T HR FG+V F
Sbjct: 1 MSDASRLKNTIYVGGLDQAVTAQTLAEAFIPFGEIADITLPKPELPSSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR++ V A P++
Sbjct: 61 EMAQDAKEAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|261195254|ref|XP_002624031.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis SLH14081]
gi|239587903|gb|EEQ70546.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis SLH14081]
gi|239610607|gb|EEQ87594.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Ajellomyces
dermatitidis ER-3]
gi|327348958|gb|EGE77815.1| nuclear cap-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 154
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K+T+YVGGL + V L AF+PFG+I D+ P + +T HR FG+V F
Sbjct: 1 MSETARLKSTIYVGGLDQSVTVRTLTEAFLPFGEIADISLPKPEIPSSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
E +DA +A+DNMD +ELYGR++ V A P++
Sbjct: 61 EEAQDAKEAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|156044768|ref|XP_001588940.1| hypothetical protein SS1G_10488 [Sclerotinia sclerotiorum 1980]
gi|154694876|gb|EDN94614.1| hypothetical protein SS1G_10488 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 153
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTF 57
M + A K T+YVGGL+ V A L AAF+PFG+I DV P +T+ HR FG+V F
Sbjct: 1 MTDQARWKATVYVGGLSHMVTTANLEAAFLPFGEIADVSIPKAEGPNSTEPHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ ED A+DNMD +EL+G+V+ VN A P +
Sbjct: 61 EDPEDTKDAIDNMDQSELFGKVIKVNAAKPPK 92
>gi|367054696|ref|XP_003657726.1| hypothetical protein THITE_2123686 [Thielavia terrestris NRRL 8126]
gi|347004992|gb|AEO71390.1| hypothetical protein THITE_2123686 [Thielavia terrestris NRRL 8126]
Length = 153
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 7/130 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ-----ATQKHRSFGFV 55
M + A K T+YVGGLA +V L AF+PFG+I DV P ++ A + HR F +V
Sbjct: 1 MTDSARWKATVYVGGLAPQVTVTTLQEAFLPFGEIADVSLPRNENPHTAAAEPHRGFAYV 60
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQ 115
F + EDA +A+DNMD AEL+GRV+ V+ A + G A +W + + W
Sbjct: 61 EFEDPEDAREAVDNMDQAELFGRVIKVSAAKAPKSTAGAGLGAKTAVW-EQEGWLAEHAV 119
Query: 116 EEEMQRLQAE 125
EE RL AE
Sbjct: 120 SEE-DRLAAE 128
>gi|367035186|ref|XP_003666875.1| hypothetical protein MYCTH_2140924 [Myceliophthora thermophila ATCC
42464]
gi|347014148|gb|AEO61630.1| hypothetical protein MYCTH_2140924 [Myceliophthora thermophila ATCC
42464]
Length = 152
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ-----ATQKHRSFGFV 55
M + K T+YVGGLA V L AF+PFG+I DV P ++ A + HR F +V
Sbjct: 1 MTDTTRWKATVYVGGLAPAVTVTTLQEAFLPFGEIADVSLPKNENPNTAAAEPHRGFAYV 60
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQ 115
F + +DA +A+DNMD AEL+GRV+ V+ A P + G QG A+ + + W
Sbjct: 61 EFEDPDDAKEAIDNMDQAELFGRVIRVSAAKPPKSAG--QGLGAKTAVWEQEGWLAEHAV 118
Query: 116 EEEMQRLQAE 125
EE RL AE
Sbjct: 119 SEE-DRLAAE 127
>gi|212533925|ref|XP_002147119.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
gi|210072483|gb|EEA26572.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
Length = 153
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ K+T+YVGGL + V L AF+PFG+I DV P L +T HR FG+V F
Sbjct: 1 MSETTRLKSTVYVGGLDQAVTSQTLTEAFLPFGEIVDVSLPKPDLPSSTDNHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR++ V A P+R
Sbjct: 61 EVPQDAKEAIDNMDQSELYGRIIKVAAAKPQR 92
>gi|212533927|ref|XP_002147120.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
gi|210072484|gb|EEA26573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces marneffei ATCC 18224]
Length = 152
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ K+T+YVGGL + V L AF+PFG+I DV P L +T HR FG+V F
Sbjct: 1 MSETTRLKSTVYVGGLDQAVTSQTLTEAFLPFGEIVDVSLPKPDLPSSTDNHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR++ V A P+R
Sbjct: 61 EVPQDAKEAIDNMDQSELYGRIIKVAAAKPQR 92
>gi|109892832|sp|P0C1I2.1|PPIE_RHIO9 RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|384486437|gb|EIE78617.1| peptidyl-prolyl cis-trans isomerase E [Rhizopus delemar RA 99-880]
Length = 315
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 18/180 (10%)
Query: 1 MANLAVQKN---TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGF 54
M ++ + KN TLY+ GL ++VNEA+LHAAFIPFG+I V+ D + HR FGF
Sbjct: 1 MPSVNITKNNKTTLYISGLDQQVNEAVLHAAFIPFGEIIAVQMATDTEIDSNNIHRGFGF 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQ 114
V + ED AMDNM +ELYG+V+ V A + + + +W D ++W ++
Sbjct: 61 VEYELAEDCQAAMDNMHLSELYGKVIKVQLAKTINV----TTTSNRAVWTD-ESWLQKYG 115
Query: 115 QEEEMQRLQAE----NRAAMQAAEELHRKKMAEDREGEKEE---DSEMKDDPMARAEAEV 167
E+++ Q + N+ +E+ + ++ G+K D ++ + R E E+
Sbjct: 116 NVEDVEEKQEDEKENNQETTSEKKEVSSYIPSSEKRGKKSRVYLDIQIGNTLAGRIEIEL 175
>gi|225563226|gb|EEH11505.1| nuclear cap-binding protein [Ajellomyces capsulatus G186AR]
Length = 154
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M+ + KNT+YVGGL + V L AF+PFG+I D+ P +A T HR FG+V F
Sbjct: 1 MSESSRLKNTIYVGGLDQSVTLRTLTEAFLPFGEIADISLPKPEAPSSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA +A+DNMD +ELYGR++ V A P++
Sbjct: 61 EDPQDAKEAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|154281705|ref|XP_001541665.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411844|gb|EDN07232.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 154
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTFLEKEDAI 64
KNT+YVGGL + V L AF+PFG+I D+ P +A T HR FG+V F + +DA
Sbjct: 8 KNTIYVGGLDQSVTLRTLTEAFLPFGEIADISLPKPEAPSSTDLHRGFGYVEFEDPQDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+DNMD +ELYGR++ V A P++
Sbjct: 68 EAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|409082298|gb|EKM82656.1| hypothetical protein AGABI1DRAFT_33563 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200130|gb|EKV50054.1| hypothetical protein AGABI2DRAFT_64665 [Agaricus bisporus var.
bisporus H97]
Length = 126
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDA 63
K T++VGGL E+++EAIL+ F FGDI +V+ P +D KHR +GFVTF DA
Sbjct: 7 SKKTVFVGGLNEDIDEAILYETFSTFGDILEVQLPSAVVDPNQPKHRGYGFVTFGASADA 66
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
A+DNMD EL G+VL VN A P +KG Q + +W +++ W +
Sbjct: 67 QDAIDNMDMNELKGKVLKVNLARP--MKGPVQPMGNRAVW-ESEEWLK 111
>gi|221061067|ref|XP_002262103.1| cyclophilin [Plasmodium knowlesi strain H]
gi|193811253|emb|CAQ41981.1| cyclophilin, putative [Plasmodium knowlesi strain H]
Length = 127
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 6/117 (5%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
LYVGG+ E ++E L+ F FGD+++++ P++ T+K+R F FV ++EK+DA A+ N
Sbjct: 9 VLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDDAKHALYN 68
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
M+ EL G+ + VNY+ R K EQ +P+W D E+ +Q EE Q EN
Sbjct: 69 MNNFELNGKRIYVNYS---RNKKMEQ---YKPVWIDDLYNQEKMKQMEEGNSNQVEN 119
>gi|389748867|gb|EIM90044.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 155
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL------DQATQKHRSFGFVTFLEKE 61
K T+++GG+ ++V+E+++ AF FGDI +V+ P Q+T KHR F FVTF
Sbjct: 8 KKTVFIGGIGDDVDESVILEAFQTFGDIIEVQLPTANANNSQQSTSKHRGFAFVTFSSSG 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
DA A+DNMD EL GRVL VN A P +KG Q + +W +++ W ++
Sbjct: 68 DAQDAIDNMDLNELRGRVLKVNLARP--MKGPSQMSGNRAVW-ESEEWLKQ 115
>gi|68531995|ref|XP_723677.1| peptidyl-prolyl cis-trans isomerase E [Plasmodium yoelii yoelii
17XNL]
gi|23478052|gb|EAA15242.1| peptidyl-prolyl cis-trans isomerase E-related [Plasmodium yoelii
yoelii]
Length = 127
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 62/95 (65%), Gaps = 6/95 (6%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVGG+ E +++ L+ F FGDI++++ P++ T K+R F F+ ++EK DA A+ NM
Sbjct: 9 LYVGGIHETIDKKCLYDIFSSFGDIRNIEIPMNLVTNKNRGFAFIEYVEKNDAKHALYNM 68
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
+ EL G+++TVNY+ R K +Q +P+W D
Sbjct: 69 NNFELNGKIITVNYS---RTKKMDQ---YKPVWID 97
>gi|325093178|gb|EGC46488.1| nuclear cap-binding protein [Ajellomyces capsulatus H88]
Length = 154
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M+ + KNT+YVGGL + V L AF+PFG I D+ P +A T HR FG+V F
Sbjct: 1 MSESSRLKNTIYVGGLDQSVTLRTLTEAFLPFGKIADISLPKPEAPSSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA +A+DNMD +ELYGR++ V A P++
Sbjct: 61 EDPQDAKEAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|242779149|ref|XP_002479384.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces stipitatus ATCC 10500]
gi|218723003|gb|EED22421.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Talaromyces stipitatus ATCC 10500]
Length = 153
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ K+T+YVGGL + V L AF+PFG+I DV P L +T HR FG+V F
Sbjct: 1 MSETTRLKSTVYVGGLDQAVTIQTLTEAFLPFGEIVDVSLPKPDLPSSTDNHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR++ V A P+R
Sbjct: 61 EIPQDAKEAIDNMDQSELYGRIIKVAAAKPQR 92
>gi|67540172|ref|XP_663860.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|40739450|gb|EAA58640.1| hypothetical protein AN6256.2 [Aspergillus nidulans FGSC A4]
gi|259479533|tpe|CBF69842.1| TPA: peptidyl prolyl cis-trans isomerase Cyclophilin, putative
(AFU_orthologue; AFUA_2G12990) [Aspergillus nidulans
FGSC A4]
Length = 153
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAI 64
K T+YVGGL + V+ L AF+PFG++ D+ P L + HR FG+V F EDA
Sbjct: 8 KCTVYVGGLDQAVSVQTLAEAFVPFGEVVDITLPKPDLPNSNDNHRGFGYVEFDSPEDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+DNMDG+ELYGR + V A P++
Sbjct: 68 EAIDNMDGSELYGRTIKVAPAKPQK 92
>gi|121715928|ref|XP_001275573.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
gi|119403730|gb|EAW14147.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus clavatus NRRL 1]
Length = 152
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 12/146 (8%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL + V L AF+PFG++ D+ P + +T HR FG+V F
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSTDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+DA +A+DNMDG+ELYGR + V A P++ + E + IW + + + + E
Sbjct: 61 DLPQDAAEAIDNMDGSELYGRTIKVAAAKPQK-ESNEGLGSKTAIW-EQEGYLAKYAVSE 118
Query: 118 EMQRLQAENRAA-------MQAAEEL 136
E + E RAA MQ EEL
Sbjct: 119 EDKMATEEARAASERPHDPMQGLEEL 144
>gi|392595839|gb|EIW85162.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 151
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 10/112 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL------DQATQKHRSFGFVTFLEKE 61
K T+++GG+ ++++E L+ F PFGDI +V+ P Q KHR FGFVTF
Sbjct: 8 KKTIFIGGIGDDIDENALYETFSPFGDIIEVQLPSAATNPNQQTEAKHRGFGFVTFGSPA 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQ-GWAAQPIWADADTWFER 112
DA A+DNMD EL GRVL VN A P +KG Q G + IW + + W +R
Sbjct: 68 DAQDAIDNMDLNELRGRVLKVNLARP--MKGVLQAGAGNRAIW-ETEEWLQR 116
>gi|397581731|gb|EJK52035.1| hypothetical protein THAOC_28735 [Thalassiosira oceanica]
Length = 128
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGG+A V L AAFIPFG I ++ P+D H+ F F+ F + +DA +A
Sbjct: 9 SKRALYVGGVATAVKLDTLRAAFIPFGPINHIEMPMDYERGTHKGFAFIEFQDADDASEA 68
Query: 67 MDNMDGAELYGRVLTVNYALPER--IKGGEQGWA 98
+ NMDGAEL+ + LTVN A R + GG+ W+
Sbjct: 69 IYNMDGAELFSKALTVNVAQASRMNLDGGKAIWS 102
>gi|389586143|dbj|GAB68872.1| cyclophilin E [Plasmodium cynomolgi strain B]
Length = 126
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
LYVGG+ E ++E L+ F FGD+++++ P++ T+K+R F FV ++EK+DA A+ N
Sbjct: 9 VLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINLVTKKNRGFAFVEYVEKDDAKHALYN 68
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
M+ EL G+ + VNY+ +++ +P+W D E+ +Q EE Q EN
Sbjct: 69 MNNFELNGKKIHVNYSKNRKME------QYKPVWIDDLYNQEKMKQMEEGNSNQVEN 119
>gi|336260313|ref|XP_003344952.1| apoptosis regulation protein [Sordaria macrospora k-hell]
gi|380095025|emb|CCC07527.1| putative apoptosis regulation protein [Sordaria macrospora k-hell]
Length = 145
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 69/113 (61%), Gaps = 13/113 (11%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGFVTF 57
M + K T++V GLA V A LH AFIPFG+I D+ P ++ +T HR F +V +
Sbjct: 1 MTDTTRWKATVHVRGLAPAVTTATLHDAFIPFGEISDISLPKNEKPDSTDPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG---------EQGWAAQ 100
++EDA +A+DNMD +EL+GRV+ V+ A +P+ K G ++GW A+
Sbjct: 61 EDEEDAKEAIDNMDQSELFGRVIRVSAAKIPKSAKEGLGSRTAVWEQEGWLAE 113
>gi|429862689|gb|ELA37325.1| peptidyl prolyl cis-trans isomerase [Colletotrichum gloeosporioides
Nara gc5]
Length = 151
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + + K T++VGGLA V + +H AFIPFG+I DV P + +T+ HR F +V +
Sbjct: 1 MTDASRWKATVFVGGLASAVTASNVHDAFIPFGEIADVSLPKNDKPNSTEPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGGEQGWAAQPIWADADTWFERQQQE 116
+ EDA +A+DNMD +E +GRVL V+ A +P K ++G ++ + ++W
Sbjct: 61 EDIEDAKEAIDNMDQSEFFGRVLKVSAAKVP---KSADEGLGSKKALWEQESWLAENAVS 117
Query: 117 EEMQRLQAE 125
EE RL AE
Sbjct: 118 EE-DRLAAE 125
>gi|156085870|ref|XP_001610344.1| RNA recognition motif (RRM)-containing protein [Babesia bovis T2Bo]
gi|154797597|gb|EDO06776.1| RNA recognition motif (RRM)-containing protein [Babesia bovis]
Length = 129
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MA+ A QK TL+V LA+EVN+ IL+A+FIPFG+I ++ P+D+ +R F+ F ++
Sbjct: 1 MADSAGQKRTLFVRELADEVNKEILYASFIPFGNIINIDLPVDKEKGTNRGIAFIEFEDE 60
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWA-AQPIWADADTW 109
EDA A+ N + +ELYGRV+ V Y+ +K + + +W D T+
Sbjct: 61 EDAKHAIFNHNESELYGRVIKVAYSTKAHVKQVKSANVRHRAVWHDDPTF 110
>gi|145231672|ref|XP_001399311.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
niger CBS 513.88]
gi|134056213|emb|CAK96388.1| unnamed protein product [Aspergillus niger]
gi|350634306|gb|EHA22668.1| hypothetical protein ASPNIDRAFT_46906 [Aspergillus niger ATCC
1015]
gi|358365842|dbj|GAA82464.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
kawachii IFO 4308]
Length = 152
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL + V L AF+PFG++ D+ P L + + HR FG+V F
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTMQTLAEAFVPFGEVVDITLPKPDLPNSNELHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMDG+ELYGR + V A P++
Sbjct: 61 DLPEDAKEAIDNMDGSELYGRTIKVAAAKPQK 92
>gi|326469666|gb|EGD93675.1| peptidyl-prolyl cis-trans isomerase [Trichophyton tonsurans CBS
112818]
gi|326478803|gb|EGE02813.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Trichophyton
equinum CBS 127.97]
Length = 152
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPFG+I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR + V A P++
Sbjct: 61 ELPQDAKEAIDNMDQSELYGRTIKVAAAKPQK 92
>gi|315050730|ref|XP_003174739.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
gi|311340054|gb|EFQ99256.1| hypothetical protein MGYG_02269 [Arthroderma gypseum CBS 118893]
Length = 152
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPFG+I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR + V A P++
Sbjct: 61 ELPQDAKEAIDNMDQSELYGRTIKVAAAKPQK 92
>gi|326429317|gb|EGD74887.1| peptidyl-prolyl cis-trans isomerase E [Salpingoeca sp. ATCC 50818]
Length = 295
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V K LYVGGLAE+V+ +L AAFIPFGD+ DV+ P+D T HR FGFV F EDA
Sbjct: 4 VNKRMLYVGGLAEDVDTDMLRAAFIPFGDLVDVQIPMDPNTDGHRGFGFVEFEMVEDANA 63
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAE 125
A+DNM R T PE GEQ DA + ++ + R E
Sbjct: 64 AIDNMVPRGGAARAYTTQRPRPET---GEQ---------DASDLIKEMREGKNAARADLE 111
Query: 126 NRAAMQAAEE 135
R+A A E
Sbjct: 112 KRSAAVGASE 121
>gi|302659230|ref|XP_003021308.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
gi|291185200|gb|EFE40690.1| hypothetical protein TRV_04584 [Trichophyton verrucosum HKI 0517]
Length = 152
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPFG+I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR + V A P++
Sbjct: 61 ELPQDAKEAIDNMDQSELYGRTIKVAAAKPQK 92
>gi|169774677|ref|XP_001821806.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
oryzae RIB40]
gi|238496735|ref|XP_002379603.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|83769669|dbj|BAE59804.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694483|gb|EED50827.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus flavus NRRL3357]
gi|391869782|gb|EIT78975.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
oryzae 3.042]
Length = 153
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL + V L AF+PFG++ D+ P + + + HR FG+V F
Sbjct: 1 MSEAARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSNELHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMDG+ELYGR + V A P++
Sbjct: 61 EVPEDAKEAIDNMDGSELYGRTIKVAAAKPQK 92
>gi|296812543|ref|XP_002846609.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS
113480]
gi|238841865|gb|EEQ31527.1| peptidyl-prolyl cis-trans isomerase E [Arthroderma otae CBS
113480]
Length = 155
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPFG+I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTARTLSEAFIPFGEIVDISLPKPELPSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD +ELYGR + V A P++
Sbjct: 61 ELPQDAKEAIDNMDQSELYGRTIKVAAAKPQK 92
>gi|449547432|gb|EMD38400.1| hypothetical protein CERSUDRAFT_113554 [Ceriporiopsis subvermispora
B]
Length = 153
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 14/153 (9%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL-----DQATQ-KHRSFGFVTFLEKE 61
K T++V G ++V+EA L F+ FGD+ +V+ P Q T+ KHR FGFVT+
Sbjct: 4 KKTIFVNGFGDDVDEAALLETFVTFGDVIEVQIPSAATNPSQPTETKHRGFGFVTYASSA 63
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 121
DA A+DNMD EL GRVL V+ A P +K QG + +W D W QQ + + R
Sbjct: 64 DAQDAIDNMDLNELNGRVLKVSIARP--LKAPLQGLGNRAVWESED-WL--QQYAKPLSR 118
Query: 122 LQAENRAAMQAAEELHRKKMAEDREGEKEEDSE 154
AA++A + A++++GE+ + E
Sbjct: 119 ---SGGAALRAQHDSSVGAEADEKDGEQRNEDE 148
>gi|295662863|ref|XP_002791985.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279637|gb|EEH35203.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 152
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---HRSFGFVTF 57
M++ + KNT+YVGGL + V L AF+PFG+I D+ P +A HR FG+V F
Sbjct: 1 MSDASRLKNTIYVGGLDQCVTIRTLTEAFLPFGEIVDITLPKPEAPSSNDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA A+DNMD +ELYGR++ V A P++
Sbjct: 61 EDAQDAKDAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|303322531|ref|XP_003071257.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110959|gb|EER29112.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 154
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAI 64
K+T+YVGGL + V L AFIPFG+I D+ P L + HR FG+V F +DA
Sbjct: 8 KSTIYVGGLDQGVTAQTLAEAFIPFGEIADITLPKPELPSSADLHRGFGYVEFELAQDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+DNMD +ELYGR++ V A P++
Sbjct: 68 EAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|119190143|ref|XP_001245678.1| hypothetical protein CIMG_05119 [Coccidioides immitis RS]
gi|320033029|gb|EFW14979.1| peptidyl-prolyl cis-trans isomerase [Coccidioides posadasii str.
Silveira]
gi|392868585|gb|EAS34386.2| peptidyl prolyl cis-trans isomerase Cyclophilin [Coccidioides
immitis RS]
Length = 152
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAI 64
K+T+YVGGL + V L AFIPFG+I D+ P L + HR FG+V F +DA
Sbjct: 8 KSTIYVGGLDQGVTAQTLAEAFIPFGEIADITLPKPELPSSADLHRGFGYVEFELAQDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+DNMD +ELYGR++ V A P++
Sbjct: 68 EAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|255932047|ref|XP_002557580.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582199|emb|CAP80372.1| Pc12g07450 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 152
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP-LDQ--ATQKHRSFGFVTF 57
M+ K+T+YVGGL + V L AF+PFG++ D+ P DQ +T+ HR FG+V F
Sbjct: 1 MSETTRLKSTVYVGGLDQGVTAHTLAEAFVPFGEVVDISLPKPDQPNSTEVHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMDG+E+YGR + V A P++
Sbjct: 61 DLPQDAKEAIDNMDGSEIYGRTIKVAAAKPQK 92
>gi|226286664|gb|EEH42177.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb18]
Length = 152
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---HRSFGFVTF 57
M++ + KNT+YVGGL + V L AF+PFG+I D+ P +A HR FG+V F
Sbjct: 1 MSDASRLKNTVYVGGLDQCVTIRTLTEAFLPFGEIVDITLPKPEAPSSNDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA A+DNMD +ELYGR++ V A P++
Sbjct: 61 EDAQDAQDAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|400597896|gb|EJP65620.1| peptidyl-prolyl cis-trans isomerase E [Beauveria bassiana ARSEF
2860]
Length = 144
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 8/140 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT---QKHRSFGFVTF 57
M++ A K T++VGGLA +V A + AFIPFG+I DVK P A + H+ F +V F
Sbjct: 1 MSDAARWKATVHVGGLAPQVTNANVVDAFIPFGEIVDVKLPKPDAPNSGETHKGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF-ERQQQE 116
+ DA +A+DNMD AEL+GR L V+ A + K ++G ++ D + W E + E
Sbjct: 61 EDSADAKEAIDNMDQAELFGRTLKVSQA--KAPKSAQEGLGSKTAVWDQEGWLAENAEGE 118
Query: 117 EEMQRLQAENRAAMQAAEEL 136
E+Q + MQ EEL
Sbjct: 119 AELQAPSGPD--PMQGLEEL 136
>gi|85110543|ref|XP_963511.1| hypothetical protein NCU06739 [Neurospora crassa OR74A]
gi|28881366|emb|CAD70408.1| related to cyclophilin [Neurospora crassa]
gi|28925194|gb|EAA34275.1| hypothetical protein NCU06739 [Neurospora crassa OR74A]
Length = 145
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 13/113 (11%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGFVTF 57
M + K T+++ GLA V A +H AFIPFG+I D+ P ++ +T HR F +V +
Sbjct: 1 MTDTTRWKATVHIRGLAPAVTTATIHDAFIPFGEIADISLPKNEKPDSTDPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG---------EQGWAAQ 100
++EDA +A+DNMD +EL+GRV+ V+ A +P+ K G ++GW A+
Sbjct: 61 EDEEDAKEAIDNMDQSELFGRVIRVSAAKIPKSAKEGLGSKTAVWEQEGWLAE 113
>gi|219115986|ref|XP_002178788.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409555|gb|EEC49486.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 89
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGLA+ + ++ AAFIPFG +K + P+D + KH+ F FV + +D +A
Sbjct: 4 SKRVLYVGGLADSASVQVVRAAFIPFGAVKSLDIPMDYVSGKHKGFAFVELGDPDDVTEA 63
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ NMDGAEL GR L V+ A
Sbjct: 64 IFNMDGAELLGRTLKVSLA 82
>gi|302692922|ref|XP_003036140.1| hypothetical protein SCHCODRAFT_50077 [Schizophyllum commune H4-8]
gi|300109836|gb|EFJ01238.1| hypothetical protein SCHCODRAFT_50077 [Schizophyllum commune H4-8]
Length = 134
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 10/111 (9%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL-------DQATQKHRSFGFVTFLEK 60
K T++VGGL +EVNEA L F FGD+ +V+ P Q KHR F FVTF
Sbjct: 8 KKTIFVGGLVDEVNEATLFETFSTFGDVVEVQLPPATTNPNQQQQENKHRGFAFVTFTSS 67
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
DA A+DNMD EL G+V+ VN A P+ K QG + +W + + W +
Sbjct: 68 ADAQDAIDNMDLNELQGKVIKVNLAKPQ--KAPVQGAGNRAVW-ETEEWLQ 115
>gi|380472149|emb|CCF46923.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 152
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 18/149 (12%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + A K T++VGGLA V + +H AFIPFG+I DV P + +T HR F +V +
Sbjct: 1 MTDSARWKATVFVGGLASIVTASNVHDAFIPFGEIADVSLPKNDKPNSTDPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG---------EQGWAAQPIWADAD 107
+ EDA +A+DNMD +E +GRV+ V+ A +P+ G +GW A+ D
Sbjct: 61 EDAEDAKEAIDNMDQSEFFGRVIKVSAAKVPKSADEGLGSKKAVWEREGWLAEHAMGD-- 118
Query: 108 TWFERQQQEEEMQRLQAENRAAMQAAEEL 136
E + EE+ ++ MQ E L
Sbjct: 119 ---EERLAEEQTTEIEVRGDDPMQGLEGL 144
>gi|71001898|ref|XP_755630.1| peptidyl prolyl cis-trans isomerase Cyclophilin [Aspergillus
fumigatus Af293]
gi|66853268|gb|EAL93592.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus Af293]
gi|159129687|gb|EDP54801.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Aspergillus fumigatus A1163]
Length = 152
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL + V L AF+PFG++ D+ P + + HR FG+V F
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSGDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMDG+ELYGR + V A P++
Sbjct: 61 DLPEDAAEAIDNMDGSELYGRTIKVAAAKPQK 92
>gi|336468490|gb|EGO56653.1| hypothetical protein NEUTE1DRAFT_138758 [Neurospora tetrasperma
FGSC 2508]
gi|350289245|gb|EGZ70470.1| hypothetical protein NEUTE2DRAFT_68809 [Neurospora tetrasperma FGSC
2509]
Length = 145
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 69/113 (61%), Gaps = 13/113 (11%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGFVTF 57
M + K T+++ GLA V A +H AFIPFG+I D+ P ++ +T HR F +V +
Sbjct: 1 MTDTTRWKATVHIRGLAPAVTTATIHDAFIPFGEIVDISLPKNEKPDSTDPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG---------EQGWAAQ 100
++EDA +A+DNMD +EL+GRV+ V+ A +P+ K G ++GW A+
Sbjct: 61 EDEEDAKEAIDNMDQSELFGRVIRVSAAKIPKSAKEGLGSKTAVWEQEGWLAE 113
>gi|119481457|ref|XP_001260757.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
gi|119408911|gb|EAW18860.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Neosartorya fischeri NRRL 181]
Length = 152
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M+ A K T+YVGGL + V L AF+PFG++ D+ P + + HR FG+V F
Sbjct: 1 MSEKARLKCTVYVGGLDQAVTVQTLAEAFVPFGEVVDITLPKPDVPNSGDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
EDA +A+DNMDG+ELYGR + V A P++
Sbjct: 61 DLPEDAAEAIDNMDGSELYGRTIKVAAAKPQK 92
>gi|336367601|gb|EGN95945.1| hypothetical protein SERLA73DRAFT_185386 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380313|gb|EGO21466.1| hypothetical protein SERLADRAFT_396290 [Serpula lacrymans var.
lacrymans S7.9]
Length = 153
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 10/112 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD------QATQKHRSFGFVTFLEKE 61
K T+++GG+ ++V+E++++ +F FGDI +V+ P QA KHR F FVT+
Sbjct: 8 KKTVFIGGIGDDVDESVIYESFSTFGDILEVQLPSAATNPSLQAEAKHRGFAFVTYSSPA 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQ-GWAAQPIWADADTWFER 112
DA A+DNMD EL GRVL VN A P +KG Q G ++ IW +++ W ++
Sbjct: 68 DAQDAIDNMDLNELRGRVLKVNLARP--MKGPVQPGGGSRAIW-ESEEWLQQ 116
>gi|403415675|emb|CCM02375.1| predicted protein [Fibroporia radiculosa]
Length = 156
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 66/110 (60%), Gaps = 9/110 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL-----DQATQ-KHRSFGFVTFLEKE 61
K T++VGG+ ++V+E L F FGD+ +V+ PL Q T+ KHR FGFVTF
Sbjct: 8 KRTIFVGGIGDDVDETSLLENFSTFGDVIEVQIPLAASNPSQPTETKHRGFGFVTFASPA 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFE 111
DA A+DNMD EL GRVL VN A ++K QG + IW +++ W +
Sbjct: 68 DAQDAIDNMDLNELNGRVLKVNIA--RQVKAPVQGAGNRAIW-ESEEWLQ 114
>gi|169608650|ref|XP_001797744.1| hypothetical protein SNOG_07410 [Phaeosphaeria nodorum SN15]
gi|111063756|gb|EAT84876.1| hypothetical protein SNOG_07410 [Phaeosphaeria nodorum SN15]
Length = 155
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGF 54
M+NL+ + K T++VGGL + V + L+ AF+PFGDI +V P L A ++HR FG+
Sbjct: 1 MSNLSDKSRLKATVFVGGLDQAVTQQTLYHAFLPFGDIVEVNLPKPDLPGAKEEHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQ 114
V F DA A+DNMD +ELYG+V+ V A P+ K +G ++ + + W +
Sbjct: 61 VEFETATDANDAIDNMDRSELYGQVIKVANAKPQ--KDANEGLGSKTAVWEQEGWLAKHA 118
Query: 115 QEEE----MQRLQAENRAAMQAAEEL 136
EE +++Q E+ M + L
Sbjct: 119 VTEEDRQATEQVQEESNGPMDPMQGL 144
>gi|310794589|gb|EFQ30050.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 152
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 74/133 (55%), Gaps = 13/133 (9%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + A K T++VGGLA V + +H AFIPFG+I DV P + +T HR F +V +
Sbjct: 1 MTDAARWKATVFVGGLASIVTASNVHDAFIPFGEIADVSLPKNDKPNSTDPHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG---------EQGWAAQPIWADAD 107
+ EDA +A+DNMD +E +GRV+ V+ A +P+ G ++GW A+ D D
Sbjct: 61 EDAEDAKEAIDNMDQSEFFGRVIKVSAAKVPKSADEGLGSKKAVWEQEGWLAEHAVGDED 120
Query: 108 TWFERQQQEEEMQ 120
Q E E++
Sbjct: 121 GVTREQITEVEVR 133
>gi|396463837|ref|XP_003836529.1| similar to peptidyl prolyl cis-trans isomerase Cyclophilin
[Leptosphaeria maculans JN3]
gi|312213082|emb|CBX93164.1| similar to peptidyl prolyl cis-trans isomerase Cyclophilin
[Leptosphaeria maculans JN3]
Length = 151
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGF 54
M+NL+ K T++VGGL + V + L AF+PFGDI +V P + + ++HR FG+
Sbjct: 1 MSNLSDTSRLKATVFVGGLDQAVTQQTLFHAFLPFGDIVEVNLPKPDIPKENEQHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
V F DAI A+DNMD +ELYG V+ V A P++
Sbjct: 61 VEFESASDAIDAIDNMDRSELYGSVIKVAAAKPQK 95
>gi|346323573|gb|EGX93171.1| RNA recognition protein, RNP-1 [Cordyceps militaris CM01]
Length = 144
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 8/140 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT---QKHRSFGFVTF 57
M++ A K T+YVGGLA +V A + AFIPFG+I +VK P A+ Q H+ F +V F
Sbjct: 1 MSDAARWKATVYVGGLAPQVTNANVVDAFIPFGEIVEVKLPKPDASNTGQTHKGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF-ERQQQE 116
+ DA +A+DNMD AE +GR L V+ A + K ++G ++ D + W E E
Sbjct: 61 EDSSDAKEAIDNMDQAEFFGRTLKVSLA--KAPKSAQEGLGSKTAIWDQEGWLAENAAGE 118
Query: 117 EEMQRLQAENRAAMQAAEEL 136
++Q + MQ E+L
Sbjct: 119 ADLQAPSGPD--PMQGLEDL 136
>gi|302509172|ref|XP_003016546.1| hypothetical protein ARB_04835 [Arthroderma benhamiae CBS 112371]
gi|291180116|gb|EFE35901.1| hypothetical protein ARB_04835 [Arthroderma benhamiae CBS 112371]
Length = 152
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPFG+I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTVRTLSEAFIPFGEITDISLPKPELPSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+DA +A+DNMD + LYGR + V A P++
Sbjct: 61 ELPQDAKEAIDNMDQSVLYGRTIKVAAAKPQK 92
>gi|156102883|ref|XP_001617134.1| cyclophilin E [Plasmodium vivax Sal-1]
gi|148806008|gb|EDL47407.1| cyclophilin E, putative [Plasmodium vivax]
Length = 124
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
LYVGG+ E ++E L+ F FGD+++++ P++ T+K+R F FV ++EK+DA A+ N
Sbjct: 9 VLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINLVTKKNRGFAFVEYVEKDDAKHALYN 68
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEE 118
M+ EL G+ + VNY+ +++ +P+W D E+ +Q EE
Sbjct: 69 MNNFELNGKKIYVNYSKNRKME------QYKPVWIDDLYNQEKMKQMEE 111
>gi|392566802|gb|EIW59977.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 157
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 9/112 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT------QKHRSFGFVTFLEKE 61
K T++VGG+ ++V+E ++ F PFGD+ +V+ P + KHR F FVT+
Sbjct: 8 KKTVFVGGIGDDVDETVILENFSPFGDVIEVQLPTAPSNPSHPNDSKHRGFAFVTYSSPA 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ 113
DA A+DNMD EL GRVL VN A P +KG Q + IW +++ W ++
Sbjct: 68 DAQDAIDNMDLNELNGRVLRVNLARP--MKGPLQPQGNRAIW-ESEEWLQKN 116
>gi|238585855|ref|XP_002390991.1| hypothetical protein MPER_09646 [Moniliophthora perniciosa FA553]
gi|215455095|gb|EEB91921.1| hypothetical protein MPER_09646 [Moniliophthora perniciosa FA553]
Length = 159
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 11/116 (9%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVK------TPLDQATQKHRSFGFVTFLEKE 61
K T++VGG+ E+V+EA+++ F FGDI +V+ P Q KHR F FVT+
Sbjct: 8 KKTVFVGGIGEDVDEAVIYEHFALFGDIIEVQLPSAATNPSQQNEAKHRGFAFVTYSSAG 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA----LPERIKGGEQGWAAQPIWADADTWFERQ 113
DA A+DNMD EL GRV+ VN A P ++ G G +P+W +++ W ++
Sbjct: 68 DAQDAIDNMDLNELRGRVIKVNLAKPMKTPMQLGGNRAGKWPRPLW-ESEEWLKQH 122
>gi|225684771|gb|EEH23055.1| conserved hypothetical protein [Paracoccidioides brasiliensis
Pb03]
Length = 167
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---HRSFGFVTF 57
M++ + KNT+YVGGL + V L AF+PFG+I D+ P +A HR FG+V F
Sbjct: 1 MSDASRLKNTIYVGGLDQCVTIRTLTEAFLPFGEIVDITLPKPEAPSSNDLHRGFGYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
+ +DA A+DNMD +ELYGR++ V A P++
Sbjct: 61 EDAQDAQDAIDNMDQSELYGRIIKVAAAKPQK 92
>gi|390597943|gb|EIN07342.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 173
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQ------KHRSFGFVTFLEKE 61
K T+++GG+ ++V+E++L F FGD+ +V+ P Q Q KHR F FVT+ E
Sbjct: 8 KKTVFIGGIGDDVDESVLLDTFSSFGDVIEVQIPPAQVNQHQPSEGKHRGFAFVTYTSAE 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 121
DA A+DNMD EL GRVL V+ A P +K Q + +W +++ W +Q + + +
Sbjct: 68 DAQDAIDNMDLNELRGRVLKVSLARP--MKTPAQLGGNRAVW-ESEEWI--KQYAKPLSQ 122
Query: 122 LQAENRAAM 130
ENR +
Sbjct: 123 SGGENRPPI 131
>gi|425774154|gb|EKV12471.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum PHI26]
gi|425778407|gb|EKV16535.1| Peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Penicillium digitatum Pd1]
Length = 152
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGFVTFLEKEDAI 64
K+T+YVGGL + V L AFIPFG++ D+ P + + + HR FG+V F +DA
Sbjct: 8 KSTVYVGGLDQGVTAHTLAEAFIPFGEVVDISLPKPEQPNSAEIHRGFGYVEFDLPQDAK 67
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+DNMDG+E+YGR + V A P++
Sbjct: 68 EAIDNMDGSEIYGRTIKVAAAKPQK 92
>gi|290980880|ref|XP_002673159.1| predicted protein [Naegleria gruberi]
gi|284086741|gb|EFC40415.1| predicted protein [Naegleria gruberi]
Length = 173
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ----------ATQKHRSFGFVTF 57
+ LYVG L+++V +L+ FIPFG++ +V P++Q A KHR + FV F
Sbjct: 29 RKVLYVGNLSQQVTRDVLYNLFIPFGEVLEVTVPVNQVNKEEKGFSGANTKHRGYAFVEF 88
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
EDA A++N++ EL+GR++TVNY+ + P+W+ ++ E
Sbjct: 89 ELPEDATDALENLNNGELFGRIITVNYSKATNLSREAFSDLNVPLWSLNESSESNNNNTE 148
Query: 118 EMQRLQAENRAAMQAAEELHRKKMA 142
N A ++ L + K++
Sbjct: 149 SSSDSNEPNVAVLETEPSLKKTKLS 173
>gi|346975312|gb|EGY18764.1| peptidyl-prolyl cis-trans isomerase E [Verticillium dahliae
VdLs.17]
Length = 153
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + A K+T++VGGLA V A + AFIPFG+I DV P + AT+ HR F +V +
Sbjct: 1 MTDAARWKSTVHVGGLAAMVTAANIQDAFIPFGEIADVSLPKNDKPNATESHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGGEQGWAAQPIWADADTWF------ 110
+ +DA +A+DNMD +E +GR+++V+ A +P K E+G ++ + + W
Sbjct: 61 EDVDDAKEAIDNMDQSEFFGRIISVSAAKVP---KSAEEGLGSKKAVWEQEGWLAENAVG 117
Query: 111 ERQQQEEEMQRLQAENRA--AMQAAEEL 136
E + E +Q+E R MQ E L
Sbjct: 118 EEDRMASEQVAIQSEARGPDPMQGLEGL 145
>gi|395333566|gb|EJF65943.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 151
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT------QKHRSFGFVTFLEKE 61
K T++VGG+ ++V+EA+L F FGD+ +V+ P KHR F FVT+
Sbjct: 8 KKTIFVGGIGDDVDEAVLLDNFATFGDVIEVQLPPAPTNPSHPNETKHRGFAFVTYASPA 67
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 121
DA A+DNMD EL GRVL VN A P +KG Q + IW D W RQ + Q
Sbjct: 68 DAQDAIDNMDLNELNGRVLRVNLARP--MKGPTQAPGNRAIWESED-WL-RQHAKPLSQS 123
Query: 122 LQAENRAAMQAAEELHRKKMAED 144
A R + E + ED
Sbjct: 124 GGAPLRGQGKGGSEEPAEGQGED 146
>gi|189200296|ref|XP_001936485.1| peptidyl-prolyl cis-trans isomerase E [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983584|gb|EDU49072.1| peptidyl-prolyl cis-trans isomerase E [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 154
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---HRSFGF 54
M+NL+ K T++VGGL + V + L+ AF+PFGDI +V P + ++ HR FG+
Sbjct: 1 MSNLSDTSRLKATVFVGGLDQAVTQQTLYHAFLPFGDIVEVNLPKPENQKQGEEHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
V F DAI A+DNMD +ELYG V+ V A P++
Sbjct: 61 VEFEAASDAIDAIDNMDRSELYGSVIKVAPAKPQK 95
>gi|302412481|ref|XP_003004073.1| peptidyl-prolyl cis-trans isomerase E [Verticillium albo-atrum
VaMs.102]
gi|261356649|gb|EEY19077.1| peptidyl-prolyl cis-trans isomerase E [Verticillium albo-atrum
VaMs.102]
Length = 153
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 82/148 (55%), Gaps = 15/148 (10%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M + A K+T++VGGLA V A + AFIPFG+I DV P + +T+ HR F +V +
Sbjct: 1 MTDAARWKSTVHVGGLAAMVTAANIQDAFIPFGEIADVSLPKNDKPNSTESHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGGEQGWAAQPIWADADTWF------ 110
+ +DA +A+DNMD +E +GR+++V+ A +P K E+G ++ + + W
Sbjct: 61 EDVDDAKEAIDNMDQSEFFGRIISVSAAKVP---KSAEEGLGSKKAVWEQEGWLAENAVG 117
Query: 111 ERQQQEEEMQRLQAENRA--AMQAAEEL 136
E + E +Q+E R MQ E L
Sbjct: 118 EEDRMASEQVTIQSEARGPDPMQGLEGL 145
>gi|388854350|emb|CCF51934.1| related to ribonucleoprotein [Ustilago hordei]
Length = 134
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ--ATQKHRSFGFVTFLEKEDAIQAM 67
T+YVG L ++E L + F+PFGDI + P A ++++ FGF+TF E+A+ A+
Sbjct: 8 TIYVGNLPSNLDEVTLSSYFLPFGDIISISVPCTTTPAGKRNKGFGFITFSNPEEALDAL 67
Query: 68 DNMDGAELYGRVLTVNYALPERIK 91
DNMD + GR + VN A P ++K
Sbjct: 68 DNMDLNSINGRTINVNLADPNKVK 91
>gi|378733866|gb|EHY60325.1| peptidylprolyl isomerase [Exophiala dermatitidis NIH/UT8656]
Length = 158
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 9 NTLYVGGL-AEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTFLEKEDAI 64
+T+YVGGL V A L AFIPFG+I D+ P +A T HR FG+V F + DA
Sbjct: 12 STIYVGGLDTTLVTAATLSEAFIPFGEIVDITLPKPEAPSSTDLHRGFGYVEFEDPADAK 71
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQ 95
+A+ NMD +ELYGRV+ V A P+R GE
Sbjct: 72 EAIANMDQSELYGRVIKVALAKPDRKDMGEN 102
>gi|145545937|ref|XP_001458652.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426473|emb|CAK91255.1| unnamed protein product [Paramecium tetraurelia]
Length = 143
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
NT+Y+GG+ E+V + FI FG+IK V P+D T K+R F F+ + + EDA A+D
Sbjct: 7 NTVYLGGIPEDVTVEQIKHLFITFGEIKSVDLPIDSETLKNRGFAFIEYEDIEDAEAAID 66
Query: 69 NMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
N D EL+G+++ V A P + K + +P+W D ++R+ EE
Sbjct: 67 NYDEGELFGKIVKVKPAKPYKPK----SFYTKPVWHSED--WQRKNNEE 109
>gi|145551907|ref|XP_001461630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429465|emb|CAK94257.1| unnamed protein product [Paramecium tetraurelia]
Length = 144
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
NT+Y+GG+ E+V + FI FG+IK V P+D T K+R F F+ + + EDA A+D
Sbjct: 7 NTVYLGGIPEDVTVEQIKHLFITFGEIKSVDLPIDSETLKNRGFAFIEYEDIEDAEAAID 66
Query: 69 NMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
N D EL+G+++ V A P + K + +P+W D ++R+ EE
Sbjct: 67 NYDEGELFGKIVKVKPAKPYKPK----SFYTKPVWHSED--WQRKNNEE 109
>gi|169861688|ref|XP_001837478.1| hypothetical protein CC1G_01390 [Coprinopsis cinerea
okayama7#130]
gi|116501499|gb|EAU84394.1| hypothetical protein CC1G_01390 [Coprinopsis cinerea
okayama7#130]
Length = 155
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 55/92 (59%), Gaps = 7/92 (7%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQ-------KHRSFGFVTF 57
A K T+++GG++++ +EA+++ F FGDI +V+ P Q T KHR F FVTF
Sbjct: 5 AKSKKTVFIGGISDDTDEALIYETFSTFGDILEVQIPPPQNTNHPQPTDPKHRGFAFVTF 64
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
DA A+DNMD EL GRVL V A P +
Sbjct: 65 SSPADAQDAIDNMDMNELRGRVLKVTLAKPTK 96
>gi|322695611|gb|EFY87416.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Metarhizium acridum CQMa 102]
Length = 152
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 76/136 (55%), Gaps = 5/136 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M+ A K T++VGGL+ V L AFIPFG+I +V+ P ++T HR F +V F
Sbjct: 1 MSEAARWKATVFVGGLSSVVTTTHLLDAFIPFGEIVEVQLPKPDSRKSTDSHRGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ EDA +A+DNMD +E +G+VL V+ A + K ++G ++ + + W EE
Sbjct: 61 EDPEDAKEAIDNMDQSEFFGKVLKVSQA--KAPKSADEGLGSRKAVWEQEGWLAEHAAEE 118
Query: 118 EMQRLQAENRAAMQAA 133
+ L ++ AA +A
Sbjct: 119 QNGALGSDEPAASSSA 134
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+V GL+ V+E L AF FGD+ +V D+ + + R FGFV+F ++++A+ A D
Sbjct: 18 NKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKEDEAVSAKD 77
Query: 69 NMDGAELYGRVLTVNYALPERIKGG 93
MDG L GR L ++YAL ER++GG
Sbjct: 78 AMDGKALLGRPLRISYAL-ERVRGG 101
>gi|451996474|gb|EMD88941.1| hypothetical protein COCHEDRAFT_1143080 [Cochliobolus
heterostrophus C5]
Length = 155
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGF 54
M+NL+ K T++VGGL + V + L AF+PFGDI +V P + ++HR FG+
Sbjct: 1 MSNLSDTSRLKATVFVGGLDQAVTQQTLFHAFLPFGDIVEVNLPKPENQSQGEQHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
V F DA+ A+DNMD +ELYG V+ V A P++
Sbjct: 61 VEFESAADAVDAIDNMDRSELYGSVIKVAPAKPQK 95
>gi|330912694|ref|XP_003296044.1| hypothetical protein PTT_04470 [Pyrenophora teres f. teres 0-1]
gi|311332144|gb|EFQ95863.1| hypothetical protein PTT_04470 [Pyrenophora teres f. teres 0-1]
Length = 154
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 6/95 (6%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGF 54
M+NL+ K T++VGGL V + L AF+PFGDI +V P + ++HR FG+
Sbjct: 1 MSNLSDTSRLKATVFVGGLDPAVTQQTLFHAFLPFGDIVEVNLPKPENQNQGEQHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
V F DAI A+DNMD +ELYG V+ V A P++
Sbjct: 61 VEFEAASDAIDAIDNMDRSELYGSVIKVAPAKPQK 95
>gi|451850861|gb|EMD64162.1| hypothetical protein COCSADRAFT_26348 [Cochliobolus sativus
ND90Pr]
Length = 155
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 1 MANLAVQ---KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGF 54
M+NL+ K T++VGGL + V + L AF+PFGDI +V P + ++HR FG+
Sbjct: 1 MSNLSDTSRLKATVFVGGLDQAVTQQTLFHAFLPFGDIVEVNLPKPENQSQGEQHRGFGY 60
Query: 55 VTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPER 89
V F DA+ A+DNMD +ELYG V+ V A P++
Sbjct: 61 VEFETAADAVDAIDNMDRSELYGSVIKVAPAKPQK 95
>gi|296005401|ref|XP_002809024.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
gi|225631965|emb|CAX64305.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
Length = 125
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 6/95 (6%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGG+ E ++E L+ F FGDI++++ PL+ T+K+R F FV ++E +DA A+ NM
Sbjct: 10 LFVGGIDETIDEKSLYDIFSSFGDIRNIEVPLNMTTKKNRGFAFVEYVEVDDAKHALYNM 69
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
+ EL G+ + VNY+ + K + +PIW D
Sbjct: 70 NNFELNGKRIHVNYS---KTKKADH---YKPIWLD 98
>gi|340522612|gb|EGR52845.1| predicted protein [Trichoderma reesei QM6a]
Length = 147
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 9/142 (6%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK--HRSFGFVTFL 58
M + A K T+YVGGLA V + + AFIPFGDI +V+ P A+ + H+ F +V +
Sbjct: 1 MTDSARWKATVYVGGLAPLVTDTHVFDAFIPFGDIVEVQLPKSDASSQDPHKGFAYVEYE 60
Query: 59 EKEDAIQAMDNMDGAELYGRVLTVNYALPERI-KGGEQGWAAQPIWADADTWFERQQQEE 117
+ DA +A+DNMD +E +GRV+ V+ P R K ++G ++ + ++W E+
Sbjct: 61 DSADAKEAIDNMDQSEFFGRVIKVS---PARAPKSADEGLGSKKAIWEQESWLAEHAAED 117
Query: 118 EM---QRLQAENRAAMQAAEEL 136
++ +L+ MQ E L
Sbjct: 118 DVANESKLEEPASDPMQGLEGL 139
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ V+E L AF FG++ +V+ D+ + + R FGFV F E+ DA+ A D M
Sbjct: 42 LFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAM 101
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
DG L GR L +++AL ER++GG
Sbjct: 102 DGKGLLGRPLRISFAL-ERVRGG 123
>gi|342874096|gb|EGU76169.1| hypothetical protein FOXB_13341 [Fusarium oxysporum Fo5176]
Length = 144
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M++ A K T+YVGGL++ ++ + AFIPFG+I +VK P A T+ HR F +V F
Sbjct: 1 MSDAARWKATVYVGGLSQMATQSHVLDAFIPFGEIVEVKVPKPDAPNSTEAHRGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ DA +A+DNMD +E +G+VL V+ A
Sbjct: 61 EDAADAKEAIDNMDQSEFFGKVLKVSQA 88
>gi|358386894|gb|EHK24489.1| hypothetical protein TRIVIDRAFT_30906 [Trichoderma virens Gv29-8]
Length = 148
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 8/142 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M + A K T+YVGGL+ V + AFIPFGDI +V+ P A T H+ F +V F
Sbjct: 1 MTDSARWKATVYVGGLSPLVTNTHVFDAFIPFGDIVEVQLPKSDAPNSTDPHKGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ DA +A+DNMD +E +GRV+ V+ A K ++G ++ + ++W E+
Sbjct: 61 EDSADAKEAIDNMDQSEFFGRVIKVSQA--RAPKSADEGLGSKKAVWEQESWLAEHAAED 118
Query: 118 EM---QRLQAENRAAMQAAEEL 136
++ +L+ MQ E L
Sbjct: 119 DVANQAKLEEPASDPMQGLEGL 140
>gi|320594195|gb|EFX06598.1| peptidyl prolyl cis-trans isomerase [Grosmannia clavigera kw1407]
Length = 170
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 23/145 (15%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL-------------DQATQ 47
M + A K T+YVGGL +V +A L AF+PFGDI DV P D A Q
Sbjct: 1 MTDTARWKATVYVGGLGPQVTKANLQDAFLPFGDIADVALPKGSNRSNGAQDRNDDTAPQ 60
Query: 48 K-------HRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
+ HR F +V + + +DA +A+DNMD +E +GR++ V A + K +G ++
Sbjct: 61 QDDDGEPGHRGFAYVEYEDVDDAKEAIDNMDKSEFFGRIIKVTAA--KAPKSASEGLGSR 118
Query: 101 PIWADADTWFERQQQEEEMQRLQAE 125
D W EE RL AE
Sbjct: 119 TALWKQDAWLAENTTSEE-DRLAAE 142
>gi|322705255|gb|EFY96842.1| peptidyl prolyl cis-trans isomerase Cyclophilin, putative
[Metarhizium anisopliae ARSEF 23]
Length = 152
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD---QATQKHRSFGFVTF 57
M+ A K T++VGGL+ V L AFIPFG+I +V+ P ++T HR F +V +
Sbjct: 1 MSEAARWKATVFVGGLSSVVTTTHLLDAFIPFGEIVEVQLPKPDSRKSTDAHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ EDA +A+DNMD +E +G++L V+ A + K ++G ++ + + W EE
Sbjct: 61 EDPEDAKEAIDNMDQSEFFGKILKVSQA--KAPKSADEGLGSRKAVWEQEGWLAEHAAEE 118
Query: 118 EMQRLQAENRAAMQAA 133
+ L + AA +A
Sbjct: 119 QSGALGGDEPAANSSA 134
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ V+E L AF FG++ +V+ D+ + + R FGFV F E+ DA+ A D M
Sbjct: 43 LFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAM 102
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
DG L GR L +++AL ER++GG
Sbjct: 103 DGKGLLGRPLRISFAL-ERVRGG 124
>gi|302916401|ref|XP_003052011.1| hypothetical protein NECHADRAFT_99935 [Nectria haematococca mpVI
77-13-4]
gi|256732950|gb|EEU46298.1| hypothetical protein NECHADRAFT_99935 [Nectria haematococca mpVI
77-13-4]
Length = 151
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT---QKHRSFGFVTF 57
M++ A K T+YVGGL++ V + AFIPFG+I D K P +A + HR F +V +
Sbjct: 1 MSDAARWKATVYVGGLSQIVTTGHILDAFIPFGEIVDCKLPKPEAPNSGEAHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ DA +A+DNMD +E +GR+L V+ A
Sbjct: 61 EDAADAKEAIDNMDQSEFFGRILKVSQA 88
>gi|392577666|gb|EIW70795.1| hypothetical protein TREMEDRAFT_61302 [Tremella mesenterica DSM
1558]
Length = 152
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 8/115 (6%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD-QATQKHRSFGFVTFLEKEDA 63
+ +K+T+Y+ G+A EVNE L AF+ FGDI D+K P + KHR F F+TF DA
Sbjct: 12 SSKKSTVYIAGIAPEVNEQQLLEAFVTFGDIIDIKIPTEPHEPNKHRGFAFLTFANPADA 71
Query: 64 IQAMDNMDGAEL-----YGRVLTVNYALPERIKG-GEQGWAAQPIWADADTWFER 112
A+DN D EL G+ L + A P R GE +P+W +++ W ++
Sbjct: 72 QDAIDNYDLNELPGYKGRGKFLKCSIAQPNRYGNEGEGDKFDRPVW-ESEEWLKK 125
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGG++ ++ L +F +G++ DVK +D+ T + R FGFVTF EDA A+ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGG++ ++ L +F +G++ DVK +D+ T + R FGFVTF EDA A+ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGM 101
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|319411588|emb|CBQ73632.1| related to ribonucleoprotein [Sporisorium reilianum SRZ2]
Length = 129
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ--ATQKHRSFGFVTFLEKE 61
++ +T+YVG L ++E L + F PFGDI + P A ++++ FGF+TF +
Sbjct: 1 MSTASSTIYVGNLPSYLDETSLASHFAPFGDIVSISVPATSTAAGKRNKGFGFITFSTPD 60
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIK 91
DA+ A+DNM+ + GR L+V+ A P ++K
Sbjct: 61 DALDALDNMNLNAINGRTLSVSLADPNKLK 90
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GG+A ++E L AF +G++ D + LD+ T + R FGFVTF E A
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GRV+ VNYA
Sbjct: 96 SAIQALDGRDLHGRVVKVNYA 116
>gi|158335765|ref|YP_001516937.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|359461305|ref|ZP_09249868.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
gi|158306006|gb|ABW27623.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 95
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L+ EV E L A F +G++K VK P+D+ + + R FGFV ++ + +A++
Sbjct: 2 TVYIGNLSYEVTEDDLSAVFAEYGEVKQVKLPVDRESGRKRGFGFVEMQDESNEEKAIEE 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAA 99
+DGAE GR L VN A P + GW
Sbjct: 62 LDGAEWMGRTLKVNKAKPRTPRPTSSGWGG 91
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGG++ ++ L +F +G++ DVK +D+ T + R FGF+TF EDA A+ M
Sbjct: 42 LFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQGM 101
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 102 DGQDLHGRRIRVNYA 116
>gi|430813346|emb|CCJ29316.1| unnamed protein product [Pneumocystis jirovecii]
Length = 229
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Query: 15 GLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT-QKHRSFGFVTFLEKEDAIQAMDNMDGA 73
GL+EEV L++ FIPFG+I V+ P D+ + H+ FG+V F E+ DA A+DNMD +
Sbjct: 75 GLSEEVTPQTLYSMFIPFGEIVRVELPRDENLDEPHQGFGYVEFKEEGDAWDAIDNMDQS 134
Query: 74 ELYGRVLTVNYALPERIKGGEQGWAAQ-PIWADADTWFERQQ 114
E +GR+L V A E K +G ++ P+W + + W +R Q
Sbjct: 135 EAFGRILHVTRARAE--KAILEGLGSKIPVW-EQEAWIQRYQ 173
>gi|407034130|gb|EKE37081.1| peptidyl-prolyl cis-trans isomerase E, putative [Entamoeba
nuttalli P19]
Length = 87
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YV GL + V+E +L+ F+PFG+I D++ P D + ++ +GFV F ++EDA QA+ NM
Sbjct: 7 IYVSGLGDFVDEQLLYEVFLPFGEITDIQLPKDNG-KLNKGYGFVVFEDEEDASQAILNM 65
Query: 71 DGAELYGRVLTVN 83
+ AEL+G+ LTV+
Sbjct: 66 NKAELFGKTLTVS 78
>gi|358056168|dbj|GAA97908.1| hypothetical protein E5Q_04588 [Mixia osmundae IAM 14324]
Length = 112
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA-TQKHRSFGFVTFLEKEDAIQAMD 68
T++VGG E + L F FGDI D++ P D + ++HR FGFV F E DA+ AMD
Sbjct: 6 TIHVGGFPLETDAQTLLTTFSTFGDIVDIQLPPDPSKPEQHRGFGFVEFREANDALDAMD 65
Query: 69 NMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
NM E+ GR + V A P KG + + + IW D
Sbjct: 66 NMHQNEMLGRTIKVTLAKPS--KGQQNLGSNRAIWED 100
>gi|46123777|ref|XP_386442.1| hypothetical protein FG06266.1 [Gibberella zeae PH-1]
gi|408399743|gb|EKJ78836.1| hypothetical protein FPSE_00979 [Fusarium pseudograminearum
CS3096]
Length = 144
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA---TQKHRSFGFVTF 57
M++ A K T++VGGL++ ++ + AFIPFG+I +VK P A T+ HR F +V +
Sbjct: 1 MSDAARWKATVHVGGLSQMATQSHVLDAFIPFGEIVEVKVPKPDAPNSTEAHRGFAYVEY 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ DA +A+DNMD +E +G+VL V+ A
Sbjct: 61 EDAADAKEAIDNMDQSEFFGKVLKVSQA 88
>gi|67481439|ref|XP_656069.1| peptidyl-prolyl cis-trans isomerase E [Entamoeba histolytica
HM-1:IMSS]
gi|56473245|gb|EAL50684.1| peptidyl-prolyl cis-trans isomerase E, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449702012|gb|EMD42727.1| peptidylprolyl cis-trans isomerase E, putative [Entamoeba
histolytica KU27]
Length = 87
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YV GL + V+E +L+ F+PFG+I D++ P D + ++ +GFV F ++EDA QA+ NM
Sbjct: 7 IYVSGLGDFVDEQLLYEVFLPFGEITDIQLPKDNG-KLNKGYGFVVFEDEEDASQAILNM 65
Query: 71 DGAELYGRVLTVN 83
+ AEL+G+ LTV+
Sbjct: 66 NKAELFGKTLTVS 78
>gi|51701753|sp|Q26548.2|PPIE_SCHMA RecName: Full=Peptidyl-prolyl cis-trans isomerase E; Short=PPIase
E; AltName: Full=Cyclophilin E; AltName: Full=Rotamase E
gi|2190533|gb|AAC47543.1| similar to Schistosoma japonicum cyclophylin, encoded by GenBank
Accession Number M93420 [Schistosoma mansoni]
Length = 273
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 5/72 (6%)
Query: 41 PLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
P+D T+KHR F FV F E EDA+ A+DNM+ +E++GR + VN A P RI+ +GW ++
Sbjct: 2 PMDYQTEKHRGFAFVEFEEVEDAMSAIDNMNESEIFGRTIRVNVARPVRIR---EGW-SR 57
Query: 101 PIWADADTWFER 112
P+W+D + W ++
Sbjct: 58 PVWSD-ENWLKK 68
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GG+A ++E L AF +G++ + + LD+ T + R FGFVTF E A
Sbjct: 36 CMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GRV+ VNYA
Sbjct: 96 SAIQALDGRDLHGRVVKVNYA 116
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
++ + L+VGGL+ +E+ L AF +GD+ + + +D+ T + R FGF++F E+A
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAA 95
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
A+ MDG +L+GR + VNYA +R
Sbjct: 96 SALQAMDGQDLHGRRIRVNYATEKR 120
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 13/135 (9%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + EA+L F PFG I +++ +D + + +GF+TF + EDA +A+D +
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAEDAKRALDQL 366
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAENRAA- 129
+G EL GR + VN+ + ER + G+Q P + D++ +R RLQ + A
Sbjct: 367 NGFELAGRPMKVNH-VTERNEQGQQA----PSFLDSEELDKRGITLNTTGRLQLMAKLAE 421
Query: 130 -------MQAAEELH 137
AAE LH
Sbjct: 422 GTGFQIPAAAAEALH 436
>gi|358399683|gb|EHK49020.1| hypothetical protein TRIATDRAFT_49564 [Trichoderma atroviride IMI
206040]
Length = 148
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + A K T++VGGL++ + AFIPFGDI +V+ P +T H+ F +V F
Sbjct: 1 MTDAARWKATVHVGGLSQLATSTHVFDAFIPFGDIVEVQVPKADAPNSTDPHKGFAYVEF 60
Query: 58 LEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAA-QPIWADADTWFERQQQE 116
+ DA +A+DNMD +E +G+V+ V+ A K ++G + + IW + ++W E
Sbjct: 61 EDSADAKEAIDNMDQSEFFGKVIKVSPA--RAPKSADEGLGSRKAIW-EQESWLAEHAAE 117
Query: 117 EEM 119
+++
Sbjct: 118 DDV 120
>gi|115441831|ref|NP_001045195.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|2624328|emb|CAA05729.1| OsGRP2 [Oryza sativa Japonica Group]
gi|19386753|dbj|BAB86134.1| OsGRP2 [Oryza sativa Japonica Group]
gi|20805007|dbj|BAB92683.1| OsGRP2 [Oryza sativa Japonica Group]
gi|113534726|dbj|BAF07109.1| Os01g0916600 [Oryza sativa Japonica Group]
gi|125528847|gb|EAY76961.1| hypothetical protein OsI_04919 [Oryza sativa Indica Group]
gi|125573102|gb|EAZ14617.1| hypothetical protein OsJ_04542 [Oryza sativa Japonica Group]
gi|215765299|dbj|BAG86996.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768370|dbj|BAH00599.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 150
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ N+ L AF FGD+ + + D+ + + R FGFV+F +DA AMD M
Sbjct: 39 LFVGGLSWNTNDDSLKEAFTSFGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAM 98
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + VN+A
Sbjct: 99 DGKELEGRSIRVNFA 113
>gi|225447115|ref|XP_002273998.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
vinifera]
gi|297739201|emb|CBI28852.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+V GL+ V+E L AF FGD+ +V+ D+ + + R FGFV F ++ DA A D M
Sbjct: 40 LFVAGLSWSVDEKSLKDAFSSFGDVTEVRIMYDKDSGRSRGFGFVYFSKEVDARSAKDAM 99
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
DG GR L V+YAL E+++GG
Sbjct: 100 DGKAFLGRPLRVSYAL-EKVRGG 121
>gi|170088360|ref|XP_001875403.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650603|gb|EDR14844.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 167
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 28/163 (17%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGD------------------IKDVKTPL------D 43
K T++VGG++++++E ++ +F FG+ I V+ P
Sbjct: 8 KKTVFVGGISDDIDETAIYQSFSTFGELLGPHRCPHLPRLRITGEIVQVQLPSAVTNQSQ 67
Query: 44 QATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
Q+ KHR F FVT+ DA A+DNMD EL+GRV+ VN A P +KG + + + IW
Sbjct: 68 QSQAKHRGFAFVTYGSSSDAQDAIDNMDMNELHGRVIKVNLARP--MKGQLEASSNRAIW 125
Query: 104 ADADTWFERQQQEEEMQRLQAENRAAMQAAEELHRKKMAEDRE 146
+++ W + Q + Q + R A Q +E + K ED E
Sbjct: 126 -ESEEWLQ-QHVKPLAQSGGVQGRNAQQGEQEDTQNKSDEDME 166
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLY+GGL+ ++NE ++ AF FGDI+ V P D+ T + FG+V F + + A A++
Sbjct: 312 TLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEA 371
Query: 70 MDGAELYGRVLTVNYALPE 88
M+G EL GR + V+Y+ P+
Sbjct: 372 MNGKELSGRRIRVDYSGPK 390
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVGGL+ V+ L + F G++ + + D QK + FGFV F E+A +A+ M
Sbjct: 214 VYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAV-AM 272
Query: 71 DGAELYGRVLTVNYA 85
G E+ GR + ++A
Sbjct: 273 TGHEIDGRAIRCDFA 287
>gi|168038795|ref|XP_001771885.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676836|gb|EDQ63314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 157
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MA + + L++GGLA +E L AF FG + DVK LD+ T + R FGFV F
Sbjct: 37 MAQRFMSSSKLFIGGLAWATDENTLRDAFGSFGTVTDVKIILDRDTGRSRGFGFVNFTSP 96
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
++A A+ MDG EL GR + V+YA
Sbjct: 97 QEAEVALQEMDGRELAGRQIRVDYA 121
>gi|443897842|dbj|GAC75181.1| aldehyde dehydrogenase [Pseudozyma antarctica T-34]
Length = 128
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD----QATQKHRSFGFVTFLEK 60
+ +T+YVG LA ++E+ L AF PFGDI V P A ++++ FGFVTF
Sbjct: 3 STSSSTVYVGNLAAHLDESALAEAFAPFGDIVSVSLPTSAPAGSAQRRNKGFGFVTFSSP 62
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
+DA+ A+DNM L GR + V A E+ K + +W D
Sbjct: 63 DDALDALDNMHLNALNGRTIHVKLADREQPKQASN----RAVWTD 103
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
++ + L+VGGL+ +E+ L F +G++ + + LD+ T + R FGF++F E+A
Sbjct: 36 SMSSSKLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEAT 95
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
AM MDG +L+GR + VNYA +R
Sbjct: 96 SAMQAMDGQDLHGRRIKVNYATEKR 120
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L + E +L F PFG I+D+K D AT + + +GFVT++ +DA +A+D +
Sbjct: 205 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQL 264
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VN+
Sbjct: 265 NGFELAGRPMKVNHV 279
>gi|401886800|gb|EJT50818.1| hypothetical protein A1Q1_08031 [Trichosporon asahii var. asahii
CBS 2479]
Length = 310
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVGGL +++E + F +G+I D+ P D+ T R FGFV ++++ + A+DNM
Sbjct: 13 IYVGGLHPDLSEGDVITIFSQWGEIADINMPRDKETGASRGFGFVMYMDQRSTVLAVDNM 72
Query: 71 DGAELYGRVLTVNYA 85
GAE+ GR L V++A
Sbjct: 73 SGAEVLGRKLKVDHA 87
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ +V L AF PFG+I D + D TQK + +GFV+FL K+DA A++ M
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 71 DGAELYGRVLTVNYA 85
+G L GRV+ N+A
Sbjct: 110 NGQWLGGRVIRTNWA 124
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GGL + ++E ++ F +G I++++ D + + FV F KE A A+
Sbjct: 165 TVYCGGLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFATKESATHAIVA 218
Query: 70 MDGAELYGRVLTVNYA 85
+ ++ G+++ ++
Sbjct: 219 VHNTDVNGQIVKCSWG 234
>gi|425447147|ref|ZP_18827139.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9443]
gi|389732378|emb|CCI03686.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9443]
Length = 100
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L EV + LH F +G + V P+DQAT K R FGFV E+ +A++
Sbjct: 2 TIYVGNLVYEVTKEDLHGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIET 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR + VN A P
Sbjct: 62 LDGAEWMGRQMKVNKARP 79
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
N L+VGGL+ V+ L AF FGD+ +V D+ + + R FGFV F ++DA A
Sbjct: 36 SSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNEDDAKCA 95
Query: 67 MDNMDGAELYGRVLTVNYALPERIKG 92
D MDG L GR L +N+AL E+ +G
Sbjct: 96 KDAMDGKALLGRPLRINFAL-EKARG 120
>gi|353240961|emb|CCA72804.1| hypothetical protein PIIN_06740 [Piriformospora indica DSM 11827]
Length = 128
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 15/96 (15%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K+T+++GG+A+ V+EA+L F PF KHR F FVTF DA A+
Sbjct: 10 KSTIFIGGIAQGVDEAVLLQTFSPF-------------DGKHRGFAFVTFGTPADAQDAI 56
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
DNMD EL G+VL V+ A P+R QG + IW
Sbjct: 57 DNMDMNELRGKVLKVSMAKPQRAP--VQGAGNRAIW 90
>gi|359463214|ref|ZP_09251777.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 99
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 52/97 (53%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
M NL ++Y+G L+ + E L+A F +G +K VK P D+ T + R F FV
Sbjct: 3 MINLGYYFMSIYIGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGND 62
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGW 97
+ +A+D ++GAE GR L VN A P +GG W
Sbjct: 63 AEEAKAIDELEGAEWMGRTLKVNKAKPRENRGGGNRW 99
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+V GL+ V+E L AF FG++ +V+ D+ + + R FGFV F ++ +A+ A D M
Sbjct: 27 LFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVCAKDAM 86
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
DG L GR L +++AL E+++GG
Sbjct: 87 DGKALLGRPLRISFAL-EKVRGG 108
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
N L+VGGL+ N+ L AF FG++ + + D+ T + R FGFV F +EDA +A
Sbjct: 36 SNKLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAA 95
Query: 68 DNMDGAELYGRVLTVNYA 85
+MDG EL GR + VN+A
Sbjct: 96 SSMDGQELDGRSVRVNFA 113
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L + E +L F PFG I+D+K D AT + + +GFVT++ +DA +A+D +
Sbjct: 69 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQL 128
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VN+
Sbjct: 129 NGFELAGRPMKVNHV 143
>gi|302815033|ref|XP_002989199.1| hypothetical protein SELMODRAFT_37572 [Selaginella
moellendorffii]
gi|300143099|gb|EFJ09793.1| hypothetical protein SELMODRAFT_37572 [Selaginella
moellendorffii]
Length = 166
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ ++ L ++F FG I + K +D+ + + R FGFVTF ++ +A+D +
Sbjct: 5 CFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRL 64
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWA 98
EL GRV+TVN ALP+ GG G+
Sbjct: 65 HNKELDGRVVTVNKALPKSDTGGGMGFG 92
>gi|302811189|ref|XP_002987284.1| hypothetical protein SELMODRAFT_37571 [Selaginella
moellendorffii]
gi|300144919|gb|EFJ11599.1| hypothetical protein SELMODRAFT_37571 [Selaginella
moellendorffii]
Length = 163
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ ++ L ++F FG I + K +D+ + + R FGFVTF ++ +A+D +
Sbjct: 5 CFVGGLSWSTDDQALESSFRQFGRILEAKVIIDRGSGRSRGFGFVTFADQRAMDEAIDRL 64
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWA 98
EL GRV+TVN ALP+ GG G+
Sbjct: 65 HNKELDGRVVTVNKALPKSDTGGGMGFG 92
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH+AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+VG + +EA + + F P+G + D K D+ + + R FGFVT + DA AM+
Sbjct: 127 NKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTMEKVGDAQTAME 186
Query: 69 NMDGAELYGRVLTVNYA---LPERIKG 92
N+DG EL GR L VN+A P R +G
Sbjct: 187 NLDGTELDGRELRVNFAGEKPPSRYRG 213
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG L + A L G + V+ D+ + + R F FVT +DA ++ +
Sbjct: 25 VYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALINAL 84
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
DG+++ GR L VN+ ++ K + A+P AD
Sbjct: 85 DGSDMGGRALKVNFPQSQKDKPRFEKSEARPPTAD 119
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N L AF FG + D K D+ T + R FGFVTF ++ + A++NM
Sbjct: 10 CFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L + E +L F PFG I+D+K D T + + +GFVT++ +DA +A+D +
Sbjct: 205 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQL 264
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VN+
Sbjct: 265 NGFELAGRPMKVNHV 279
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+ +TL+VG ++ E NE +L AF G + +V+ P D + + FG++TF EDA A
Sbjct: 294 ESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGFGYITFSSVEDAKNA 353
Query: 67 MDNMDGAELYGRVLTVNYALP 87
M+NM GA++ GR + ++YA P
Sbjct: 354 MENMMGADVGGRPVRLDYATP 374
>gi|331225259|ref|XP_003325300.1| hypothetical protein PGTG_07133 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304290|gb|EFP80881.1| hypothetical protein PGTG_07133 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 141
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T++VG + +N LH++F PFG+I+D++ P D ++ +R+F F+TF ++ +A+ A+DN
Sbjct: 10 TIFVGNIPPNINAEALHSSFSPFGNIRDIQIPTDPQSRNNRNFAFITFQDQIEALDAIDN 69
Query: 70 MDGAELYG---RVLTVNYA 85
M L ++L VN A
Sbjct: 70 MHLNLLSSDSEKILKVNLA 88
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N L AF FG + D K D+ T + R FGFVTF ++ + A++NM
Sbjct: 10 CFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|359460000|ref|ZP_09248563.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 95
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L AF +G +K VK P D+ T K R FGFV + +A+D
Sbjct: 2 SIYVGNLSYDVTEENLSTAFSEYGTVKLVKLPTDRETGKMRGFGFVEMSSDAEEAKAIDE 61
Query: 70 MDGAELYGRVLTVNYALP 87
++GAE GR LTVN A P
Sbjct: 62 LEGAEWMGRTLTVNKARP 79
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGLA E L AF PFG+I +V+ D+ T + R FGFV+++ ++A +AM+ M
Sbjct: 39 LFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAM 98
Query: 71 DGAELYGRVLTVNYA 85
DG L GR + VNYA
Sbjct: 99 DGRVLDGRTIRVNYA 113
>gi|331252664|ref|XP_003338866.1| hypothetical protein PGTG_20403 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309317856|gb|EFP94447.1| hypothetical protein PGTG_20403 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 141
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T++VG + +N LH++F PFG+I+D++ P D ++ +R+F F+TF ++ +A+ A+DN
Sbjct: 10 TIFVGNIPPNINAEALHSSFSPFGNIRDIQIPTDPQSRNNRNFAFITFQDQIEALDAIDN 69
Query: 70 MDGAELYG---RVLTVNYA 85
M L ++L VN A
Sbjct: 70 MHLNLLSSDSEKILKVNLA 88
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GG++ +E L AF +GD+ D K +D+ T + R FGF+TF E+A A+ M
Sbjct: 42 LFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQAM 101
Query: 71 DGAELYGRVLTVNYA 85
D EL GR + VNYA
Sbjct: 102 DNKELDGRTVRVNYA 116
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF PFG++ + K D+ T + R FGFVTF +++ + A++ M
Sbjct: 10 CFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEAM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|168034678|ref|XP_001769839.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678948|gb|EDQ65401.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 133
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
+ + L++GGLA +E L AF FG + +VK LD+ T + R FGFV F E+A
Sbjct: 42 MSSSKLFIGGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVNFTSPEEAEV 101
Query: 66 AMDNMDGAELYGRVLTVNYA 85
A+ MDG EL GR + V+YA
Sbjct: 102 ALQEMDGRELAGRQIRVDYA 121
>gi|357462205|ref|XP_003601384.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490432|gb|AES71635.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 135
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+VGGL+ V+E L AF FGD+ +V+ D+ + + R FGFV F ++ A A D
Sbjct: 36 NKLFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKD 95
Query: 69 NMDGAELYGRVLTVNYAL 86
MDG L GR L +N+AL
Sbjct: 96 AMDGKALLGRPLRINFAL 113
>gi|256083494|ref|XP_002577978.1| splicing factor 3b subunit 4 (fragment) [Schistosoma mansoni]
gi|350645079|emb|CCD60205.1| splicing factor 3b, subunit 4 (fragment),putative [Schistosoma
mansoni]
Length = 344
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+VNE+IL F+ G + +V P D+ +H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
M M+ +LYG+ + VN A
Sbjct: 71 MRIMNMIKLYGKPIRVNKA 89
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL + N +++G L EV+E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDIGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNGQYLCNRAITISYAFKKDSKGERHGSAAERLLA 196
>gi|259490555|ref|NP_001158902.1| uncharacterized protein LOC100303796 [Zea mays]
gi|194702804|gb|ACF85486.1| unknown [Zea mays]
gi|413936817|gb|AFW71368.1| hypothetical protein ZEAMMB73_137394 [Zea mays]
Length = 327
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL E NE +L AF +G I VK D A K + +GFVTF A QA+
Sbjct: 7 NSVYVGGLPYEANEEMLRDAFGYYGTIVSVKVINDHAV-KGKCYGFVTFTHPRAAEQAIA 65
Query: 69 NMDGAELYGRVLTVNYALPERIKG----GEQGWAAQPIWADADTWFERQQQEEEMQR 121
MDG +L R++ VN R +G G G+ P D +++R+ +E R
Sbjct: 66 GMDGKKLGNRIVRVNEV---RTRGPRDFGRDGFRRDPRRYGRDPYWDRRDRERSYDR 119
>gi|413936816|gb|AFW71367.1| RNA-binding protein 25 [Zea mays]
Length = 329
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL E NE +L AF +G I VK D A K + +GFVTF A QA+
Sbjct: 7 NSVYVGGLPYEANEEMLRDAFGYYGTIVSVKVINDHAV-KGKCYGFVTFTHPRAAEQAIA 65
Query: 69 NMDGAELYGRVLTVNYALPERIKG----GEQGWAAQPIWADADTWFERQQQEEEMQR 121
MDG +L R++ VN R +G G G+ P D +++R+ +E R
Sbjct: 66 GMDGKKLGNRIVRVNEV---RTRGPRDFGRDGFRRDPRRYGRDPYWDRRDRERSYDR 119
>gi|158339703|ref|YP_001520710.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158309944|gb|ABW31560.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 89
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ + E L+A F +G +K VK P D+ T + R F FV + +A+D
Sbjct: 2 SIYVGNLSFDATEQDLNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDE 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGW 97
++GAE GR L VN A P +GG W
Sbjct: 62 LEGAEWMGRTLKVNKARPRENRGGGNRW 89
>gi|67483728|ref|XP_657084.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56474323|gb|EAL51698.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449705266|gb|EMD45349.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 136
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G LA V + L AAF FG + D K D+ +Q+ + FGFVTF + EDA +A++ M
Sbjct: 4 LYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEM 63
Query: 71 DGAELYGRVLTVNYALP 87
+ EL GR + V+ + P
Sbjct: 64 NEQELEGRRIKVDVSRP 80
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D K +D+ + + R FGFV F +++ A +AM+ M
Sbjct: 41 LFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAM 100
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VN A
Sbjct: 101 DGQQLHGRNIRVNLA 115
>gi|115384168|ref|XP_001208631.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196323|gb|EAU38023.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 132
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 25 LHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLT 81
L AF+PFG++ D+ P + + HR FG+V F EDA +A+DNMDG+ELYGR +
Sbjct: 4 LAEAFVPFGEVVDITLPKPDVPNTNEAHRGFGYVEFDLPEDAKEAIDNMDGSELYGRTIK 63
Query: 82 VNYALPER 89
V A P++
Sbjct: 64 VAAAKPQK 71
>gi|291224886|ref|XP_002732430.1| PREDICTED: splicing factor 3b, subunit 4-like [Saccoglossus
kowalevskii]
Length = 388
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+EA+L F+ G + + P D+ TQ+H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEALLWELFLQSGPVVNTHMPKDRVTQQHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ ++YG+ + VN A
Sbjct: 71 IKIMNMIKIYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D + + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPESGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITISYAFKKDSKGERHGSAAERLLA 196
>gi|167383625|ref|XP_001736605.1| cold-inducible RNA-binding protein [Entamoeba dispar SAW760]
gi|165900936|gb|EDR27150.1| cold-inducible RNA-binding protein, putative [Entamoeba dispar
SAW760]
Length = 138
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G LA V + L AAF FG + D K D+ +Q+ + FGFVTF + EDA +A++ M
Sbjct: 4 LYIGSLAYSVTDESLRAAFEKFGTVTDCKVVTDRESQRSKGFGFVTFEKDEDAKKAIEEM 63
Query: 71 DGAELYGRVLTVNYALP 87
+ EL GR + V+ + P
Sbjct: 64 NEQELEGRRIKVDVSKP 80
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V +AIL F+ G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIKVNKA 89
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L F FG I V K D T + F FV F E
Sbjct: 95 NMDVGAN-IFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF 110
+ A++ M G L R +TV+YA + KG G AA+ + A + F
Sbjct: 154 ASDSAIEAMSGQFLCNRAITVSYAFKKDAKGERHGTAAERMLAAQNPLF 202
>gi|195995613|ref|XP_002107675.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588451|gb|EDV28473.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 330
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ EV+ L AF +G +++ +D+ + + R FGFV+F + EDA A+D M
Sbjct: 16 LFIGGLSSEVDNTKLREAFQQYGRLREAFVTVDRMSGRSRGFGFVSFYDPEDAQDAIDQM 75
Query: 71 DGAELYGRVLTVNYAL 86
G EL GR + V++A+
Sbjct: 76 TGKELCGRSIRVSHAV 91
>gi|345563448|gb|EGX46448.1| hypothetical protein AOL_s00109g20 [Arthrobotrys oligospora ATCC
24927]
Length = 166
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 8 KNTLYVGGL-AEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K T+YV GL + L+ F+PFG I D+ PLD++T + F +V F + DA A
Sbjct: 8 KATIYVTGLDPTTTTSSTLYTFFLPFGPITDIHLPLDKSTSLPKGFAYVEFTDAIDASAA 67
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRLQAEN 126
+DN D AEL+GRV+ V+ A + G G + + W Q+ + + E+
Sbjct: 68 IDNFDQAELFGRVIRVSQAKNLGFREGGAGRVESGLGSKVAVW--EQEGWLKKHEVDEED 125
Query: 127 RAAMQAAE 134
R A++ A+
Sbjct: 126 RKAVEGAK 133
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF +E QA++ M
Sbjct: 8 CFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEM 67
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 68 NGKELDGRSITVNEAQSRR 86
>gi|22795238|gb|AAN08210.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 80
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 102 IWADADTWFERQQQEEEMQRLQAENRAAMQAAEELHRKKMAEDREGEKEEDSEMKDDPMA 161
+WADADTWFERQQQEEEMQRLQAE RAAMQAAE+LHR+K+A ++EGEKEE+++ DPMA
Sbjct: 10 VWADADTWFERQQQEEEMQRLQAEQRAAMQAAEKLHREKLAAEKEGEKEEETDTNADPMA 69
Query: 162 RAEAEVLKQNN 172
AEA+ LKQ++
Sbjct: 70 AAEAQALKQSS 80
>gi|246771225|gb|ACS94937.1| putative glycine-rich RNA-binding protein [Tamarix hispida]
Length = 143
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L+VGGL+ ++ L AF FG++ D K D+ T + R FGFV F++ E A
Sbjct: 31 CMSSSRLFVGGLSWGTDDQSLKDAFSSFGEVTDAKVITDRETGRSRGFGFVNFVDNEAAG 90
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +MDG EL GR + V++A
Sbjct: 91 SALSSMDGVELNGRSIRVSFA 111
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L+VGGL+ +E L AF FG++ + + +D+ + + R FGF+TF E+A
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
AM +MDG EL GR + VN+A
Sbjct: 88 AAMTSMDGKELQGRNIRVNHA 108
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L + E +L F PFG I+D+K D T + + +GFVT++ +DA +A+D +
Sbjct: 69 LYIGSLHYNITEEMLKGIFEPFGKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQL 128
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VN+
Sbjct: 129 NGFELAGRPMKVNHV 143
>gi|56755563|gb|AAW25960.1| SJCHGC01449 protein [Schistosoma japonicum]
Length = 152
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+VNE+IL F+ G + +V P D+ +H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVNESILWELFLQAGPVVNVHMPKDRINMQHQGYGFVEFMTEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
M M+ +LYG+ + VN A
Sbjct: 71 MRIMNMIKLYGKPIRVNKA 89
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
N ++VGGL+ + +++ L AAF FG + + K D+ T + R FGFVTF E A A+
Sbjct: 2 SNKIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAI 61
Query: 68 DNMDGAELYGRVLTVNYA 85
+ MDG EL GR + VN A
Sbjct: 62 EEMDGVELDGRNIRVNEA 79
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+EA+L F+ G + + P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITISYAFKKDSKGERHGSAAERLLA 196
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L+VGGL+ +E L AF FG++ + + +D+ + + R FGF+TF E+A
Sbjct: 28 CMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEAS 87
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
AM +MDG EL GR + VN+A
Sbjct: 88 AAMTSMDGKELQGRNIRVNHA 108
>gi|218246364|ref|YP_002371735.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257059410|ref|YP_003137298.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166842|gb|ACK65579.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589576|gb|ACV00463.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 92
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV EA L++ F +G +K V P D+ T + R F FV A+D
Sbjct: 2 SIYVGNLSYEVTEADLNSVFAEYGSVKRVHVPTDRDTGRPRGFAFVEMGTDAQEATAIDT 61
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
+DGAE GR LTVN A P G
Sbjct: 62 LDGAEWMGRALTVNLARPRENSG 84
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L + E +L F PFG I D+K D AT + + +GFVT+ +DA +A+D +
Sbjct: 180 LYIGSLHYNITEEMLKGIFEPFGKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQL 239
Query: 71 DGAELYGRVLTVNY 84
+G EL GR + VN+
Sbjct: 240 NGFELAGRPMKVNH 253
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V +AIL F+ G + V P D+ T H+ FGF+ F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIKVNKA 89
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L F FG I V K D T + F FV F E
Sbjct: 95 NMDVGAN-VFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA + KG G AA+ + A + F + +
Sbjct: 154 ASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERHGTAAERMLAAQNPLFPSDKPNQ 209
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V +AIL F+ G + V P D+ T H+ FGF+ F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIKVNKA 89
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L F FG I V K D T + F FV F E
Sbjct: 95 NMDVGAN-VFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGXSKGFAFVNFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA + KG G AA+ + A + F + +
Sbjct: 154 ASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERHGTAAERMLAAQNPLFPSDKPNQ 209
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V +AIL F+ G + V P D+ T H+ FGF+ F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIKVNKA 89
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L F FG I V K D T + F FV F E
Sbjct: 95 NMDVGAN-VFVGNLDPEVDEKLLFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA + KG G AA+ + A + F + +
Sbjct: 154 ASDSAIEAMNGQFLCNRAITVSYAFKKDTKGERHGTAAERMLAAQNPLFPSDKPNQ 209
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ + + + L+VGGLA + + AF FG++ +VK D+ T + R FGFVTF
Sbjct: 34 LVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATD 93
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
+DA A+ +DG +L GR + VNYA
Sbjct: 94 QDAEAALQALDGRDLAGRTIRVNYA 118
>gi|281210213|gb|EFA84381.1| hypothetical protein PPL_03459 [Polysphondylium pallidum PN500]
Length = 193
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 20/99 (20%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHR------------- 50
+ K TLYVGGL + V L AFIPFG+I+D+ PLD T+ +R
Sbjct: 1 MTTVKKTLYVGGLDDNVTVDTLRGAFIPFGEIRDISLPLDYKTRMNRIEFIINKSINLLK 60
Query: 51 ----SFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+F F T +EDA+ A+DNM +E++GR + A
Sbjct: 61 RIVLTFKFDT---REDALDAVDNMHDSEIFGRTINCTIA 96
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ + + + L+VGGLA + + AF FG++ +VK D+ T + R FGFVTF
Sbjct: 34 LVSRGMSGSKLFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATD 93
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
+DA A+ +DG +L GR + VNYA
Sbjct: 94 QDAEAALQALDGRDLAGRTIRVNYA 118
>gi|229367642|gb|ACQ58801.1| Cold-inducible RNA-binding protein [Anoplopoma fimbria]
Length = 179
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ E NE L AAF +G I+ V D+ T+K R FGFV + EDA AMD M
Sbjct: 7 LFIGGLSFETNEESLAAAFGKYGTIEKVDVIRDRETEKSRGFGFVKYDNAEDAKDAMDGM 66
Query: 71 DGAELYGRVLTVN 83
+G L GR + V+
Sbjct: 67 NGQTLDGRTIRVD 79
>gi|428768443|ref|YP_007160233.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
gi|428682722|gb|AFZ52189.1| RNP-1 like RNA-binding protein [Cyanobacterium aponinum PCC
10605]
Length = 81
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 51/78 (65%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +++E L + F +G++K V PLD+ T++ R FGFV ++ I+A++
Sbjct: 2 SIYVGNLSYDISENDLQSVFADYGEVKRVYLPLDRETKRKRGFGFVEMSNDDEEIKAIET 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGA+ GR + VN A P
Sbjct: 62 LDGAQWMGRQIKVNKAKP 79
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF +E QA++ M
Sbjct: 8 CFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEM 67
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 68 NGKELDGRQVTVNEAQSRR 86
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ V++ L AF FGD+ D K D+ + + R FGFV F E A
Sbjct: 32 CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESAS 91
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ MDG +L GR + V+YA
Sbjct: 92 SALSAMDGKDLNGRSIRVSYA 112
>gi|407033602|gb|EKE36900.1| RNA recognition motif (RRM, RBD, or RNP domain) containing
protein [Entamoeba nuttalli P19]
Length = 136
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G LA V + L AAF FG + D K D+ +Q+ + FGFVTF + EDA +A++ M
Sbjct: 4 LYIGSLAYSVTDESLKAAFEKFGTVTDCKVVTDRDSQRSKGFGFVTFEKDEDAKKAIEEM 63
Query: 71 DGAELYGRVLTVNYALP 87
+ EL GR + V+ + P
Sbjct: 64 NEQELEGRRIKVDVSRP 80
>gi|327303568|ref|XP_003236476.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS
118892]
gi|326461818|gb|EGD87271.1| peptidyl-prolyl cis-trans isomerase [Trichophyton rubrum CBS
118892]
Length = 144
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTF 57
M + + K T+YVGGL + V L AFIPF +I D+ P L +T HR FG++ F
Sbjct: 1 MTDASRLKGTIYVGGLDQAVTVRTLSEAFIPFVEITDISLPKPELSSSTDLHRGFGYIEF 60
Query: 58 LEKEDAIQAMDNMDGAEL 75
+DA +A+DNMD +EL
Sbjct: 61 ELPQDAKEAIDNMDQSEL 78
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+EA++ F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ ++YG+ + VN A
Sbjct: 71 IKVMNMIKVYGKPIRVNKA 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N L++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-LFIGNLDTEVDEKLLYDTFSAFGVI--LQTPKIMRDSDTGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKESKGERHGSAAERLLA 196
>gi|125982457|ref|XP_001355096.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
gi|54643408|gb|EAL32152.1| GA17684 [Drosophila pseudoobscura pseudoobscura]
Length = 341
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E++L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAIQAM 67
+++G L EV+E +L+ F FG I ++TP D T + F F+ F E + AM
Sbjct: 102 IFIGNLDLEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFASFEASDAAM 159
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
D M+G L R ++V+YA + KG G AA+ + A
Sbjct: 160 DAMNGQYLCNRPISVSYAFKKDSKGERHGSAAERLLA 196
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL++G L+ V E ++ AF GD++ V+ P D+ T + FG+V F EDA A+
Sbjct: 295 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKA 354
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
M+GAE+ GR + V++A P++ G
Sbjct: 355 MNGAEIAGRAIRVDFAPPKQDNG 377
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ V+ L + F G++ + D+ +QK R FG+V F + E + +A++
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEK- 254
Query: 71 DGAELYGRVLTVNYAL 86
DG+E+ GR + VNYA
Sbjct: 255 DGSEIDGRAIRVNYAT 270
>gi|195174722|ref|XP_002028121.1| GL21313 [Drosophila persimilis]
gi|194115861|gb|EDW37904.1| GL21313 [Drosophila persimilis]
Length = 341
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E++L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSESLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FG++ + + D+ T K R FGFV+F +DA AM +M
Sbjct: 39 LFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGKSRGFGFVSFSNGDDAKNAMSSM 98
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + VN+A
Sbjct: 99 DGQELEGRNIHVNFA 113
>gi|340381114|ref|XP_003389066.1| PREDICTED: splicing factor 3B subunit 4-like [Amphimedon
queenslandica]
Length = 364
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E++L F+ G + ++ P D+ TQ H+ +GFV F+ ++DA A
Sbjct: 11 QDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDI-KDVKTPLDQATQKHRSFGFVTFLE 59
M +L + N L++G L E++E +L+ F FG I + K D + + F FV F
Sbjct: 93 MKSLDIGAN-LFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
+ + A++ M+G L R ++V+YA + KG G
Sbjct: 152 FDASDAAIEAMNGQYLCNRQVSVSYAFKKESKGERHG 188
>gi|425455329|ref|ZP_18835049.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9807]
gi|389803795|emb|CCI17308.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9807]
Length = 100
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L EV + L F +G + V P+DQAT K R FGFV E+ +A++
Sbjct: 2 TIYVGNLVYEVTKEDLQGVFAEYGTVVRVYLPVDQATGKMRGFGFVEMSSDEEEAKAIET 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR + VN A P
Sbjct: 62 LDGAEWMGRQMKVNKARP 79
>gi|159163578|pdb|1X5U|A Chain A, Solution Structure Of Rrm Domain In Splicing Factor 3b
Length = 105
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 14 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 73
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ MD +LYG+ + VN A
Sbjct: 74 IKIMDMIKLYGKPIRVNKA 92
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG LAE V+ A+L F PFG+I +V+ D A K + FGFV+F+ +EDA +A+ M
Sbjct: 89 IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEM 148
Query: 71 DGAELYGRVLTVNYA 85
D + G+ + N+A
Sbjct: 149 DSVTIGGKQVKTNWA 163
>gi|226494433|ref|NP_001148482.1| RNA-binding protein 25 [Zea mays]
gi|195619698|gb|ACG31679.1| RNA-binding protein 25 [Zea mays]
Length = 329
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL E NE +L AF +G I VK D A K + +GFVTF QA+
Sbjct: 7 NSVYVGGLPYEANEEMLRDAFGYYGTIVSVKVINDHAV-KGKCYGFVTFTHPRATEQAIA 65
Query: 69 NMDGAELYGRVLTVNYALPERIKG----GEQGWAAQPIWADADTWFERQQQEEEMQR 121
MDG +L R++ VN R +G G G+ P D +++R+ +E R
Sbjct: 66 GMDGKKLGNRIVRVNEV---RTRGPRDFGRDGFRRDPRRYGRDPYWDRRDRERSYDR 119
>gi|412991371|emb|CCO16216.1| RNA-binding motif protein, X-linked 2 [Bathycoccus prasinos]
Length = 336
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGG+ E+ E + A +G+I DV P D+ T K + F FV +L++ I A+DN+
Sbjct: 100 VFVGGIHSELTEGDVLAILSQYGEIVDVFVPRDEKTGKSKGFAFVCYLDQRSTIIAVDNL 159
Query: 71 DGAELYGRVLTVNYALPERIK 91
+G+++ GR+L V++ R++
Sbjct: 160 NGSKVLGRILRVDHCEDYRLR 180
>gi|168033388|ref|XP_001769197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679462|gb|EDQ65909.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL+ E +E + AF+ FG++ VK D+ + + R FGFV+F A A+
Sbjct: 5 NSVYVGGLSYESSEDTVKKAFMEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMAIR 64
Query: 69 NMDGAELYGRVLTVN 83
+MDG ++ GR + VN
Sbjct: 65 DMDGGQIEGRTIRVN 79
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ ++ L AF +G++ + + +D+ T + R FGFVTF E+A
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 96 SAIQALDGQDLHGRRVRVNYA 116
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ V++ L AF FGD+ D K D+ + + R FGFV F E A
Sbjct: 32 CMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESAS 91
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ MDG +L GR + V+YA
Sbjct: 92 SALSAMDGKDLDGRSIRVSYA 112
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ ++ L AF +G++ + + +D+ T + R FGFVTF E+A
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 96 SAIQALDGQDLHGRRVRVNYA 116
>gi|359463045|ref|ZP_09251608.1| RNA-binding protein [Acaryochloris sp. CCMEE 5410]
Length = 90
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L F +G +K K P D+ T + R FGFV + + +A+D
Sbjct: 2 SIYVGNLSYDVTEKDLSTVFAEYGTVKSAKLPTDRETGRIRGFGFVEMGDDTEEAKAIDE 61
Query: 70 MDGAELYGRVLTVNYALPERIKGG 93
++GAE GR L VN A P +GG
Sbjct: 62 LEGAEWMGRTLKVNKAKPRENRGG 85
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N+ L AF FGDI D K D+ T + R FGFVTF +++ A++ M
Sbjct: 8 CFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGM 67
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 68 NGQELDGRNITVNEA 82
>gi|194762578|ref|XP_001963411.1| GF20385 [Drosophila ananassae]
gi|190629070|gb|EDV44487.1| GF20385 [Drosophila ananassae]
Length = 341
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ ++ L AF +G++ + + +D+ T + R FGFVTF E+A
Sbjct: 36 CMSSSKLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 96 SAIQALDGQDLHGRRVRVNYA 116
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L +AF FG+I D K D+ T + R FGFVTF +E A++ M
Sbjct: 6 CFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEGM 65
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 66 NGKELDGRSITVNQAQSRR 84
>gi|194896158|ref|XP_001978424.1| GG19577 [Drosophila erecta]
gi|190650073|gb|EDV47351.1| GG19577 [Drosophila erecta]
Length = 339
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N+ L AF FG+I D K D+ T + R FGFVTF E A++ M
Sbjct: 7 CFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIEGM 66
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 67 NGQDLDGRNITVNEA 81
>gi|195432797|ref|XP_002064403.1| GK19717 [Drosophila willistoni]
gi|194160488|gb|EDW75389.1| GK19717 [Drosophila willistoni]
Length = 339
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKLMRDPETGKSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|170057743|ref|XP_001864617.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
gi|167877079|gb|EDS40462.1| splicing factor 3B subunit 4 [Culex quinquefasciatus]
Length = 360
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGERHGSAAERLLA 196
>gi|195469914|ref|XP_002099881.1| GE16738 [Drosophila yakuba]
gi|194187405|gb|EDX00989.1| GE16738 [Drosophila yakuba]
Length = 339
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|157137418|ref|XP_001663981.1| spliceosome associated protein [Aedes aegypti]
gi|108869713|gb|EAT33938.1| AAEL013795-PA [Aedes aegypti]
Length = 362
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDDKVSETLLWEMFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDSKGERHGSAAERLLA 196
>gi|167540183|ref|XP_001741597.1| U2 snRNP component IST3 [Entamoeba dispar SAW760]
gi|165893807|gb|EDR21934.1| U2 snRNP component IST3, putative [Entamoeba dispar SAW760]
Length = 135
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+GG+A E+NE + F FG++ D+ P + +H+ F F+ + + + A+D
Sbjct: 37 NEIYIGGIANELNEGDIIIVFSQFGEVIDINMPWNNDEDEHKGFCFLKYKDPRSCVLAID 96
Query: 69 NMDGAELYGRVLTVNYA 85
N +G EL GR LTV+++
Sbjct: 97 NFNGIELNGRRLTVDHS 113
>gi|403220709|dbj|BAM38842.1| uncharacterized protein TOT_010000309 [Theileria orientalis strain
Shintoku]
Length = 118
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
+ TL+V G+AE+V++ +L+AAF FG I +++ P D+ K++S F+ F ++EDA A
Sbjct: 8 NRRTLFVRGIAEDVDKDLLYAAFSQFGTILNLEIPKDKDKDKNKSIAFIEFEDEEDAKHA 67
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
+ N +ELYGRV+ V+Y+ + + +W D + + Q+ ++Q
Sbjct: 68 IFNRHNSELYGRVIKVSYSTHSHVHTTRH----KAVWDDDINFNIKVNQDVQIQ 117
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella
moellendorffii]
Length = 130
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGLA V++ L AF +G++ + + +D+ T + R FGFVTF +A A+ M
Sbjct: 12 LFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQGM 71
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+YA
Sbjct: 72 DGHELGGRSIRVDYA 86
>gi|328857009|gb|EGG06128.1| hypothetical protein MELLADRAFT_87443 [Melampsora larici-populina
98AG31]
Length = 136
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
MA V++ +++VG + ++ L AAF PFG I D+ P D T+ +R+F F+TF +
Sbjct: 1 MAQAPVERKSIFVGNIPTDIAPEQLQAAFQPFGVITDLHIPPDTQTRTNRNFAFITFSDA 60
Query: 61 EDAIQAMDNMDGAELYG---RVLTVNYALPERIKGGEQG---WAA-QPIWAD 105
A+ A+DNM L ++L VN A G G W + + IW D
Sbjct: 61 SSAVDAIDNMHLNTLPSHPLKILKVNLARANNKSGASAGAGQWGSKKAIWDD 112
>gi|327279530|ref|XP_003224509.1| PREDICTED: cold-inducible RNA-binding protein-like [Anolis
carolinensis]
Length = 148
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A + L++GGL+ + NE L F P+GDI +V D+ TQ+ R FGF+T+ EDA
Sbjct: 1 MASDEGKLFIGGLSFDTNEQNLEQLFSPYGDIAEVVVVKDRETQRSRGFGFITYCRPEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVN 83
AM M+G + GR + V+
Sbjct: 61 KDAMRAMNGESVDGRQIRVD 80
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL++G L+ V E ++ AF GD++ V+ P D+ T + FG+V F +DA A+
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKA 356
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
M+GAE+ GR + V++A P++ G
Sbjct: 357 MNGAEIAGRAIRVDFAPPKQDNG 379
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ V+ L + F G++ + D+ +QK R FG+V F + + +A++
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLGSSAKAIEK- 256
Query: 71 DGAELYGRVLTVNYAL 86
DG+E+ GR + VNYA
Sbjct: 257 DGSEIDGRAIRVNYAT 272
>gi|220910060|ref|YP_002485371.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866671|gb|ACL47010.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 99
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ V + L AF +G +K V P D+ T + R F FV ++ A++
Sbjct: 2 SIYVGNLSYSVTQNDLIQAFTEYGSVKSVHLPTDRETGRLRGFAFVEMSTSDEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
+DGAE GR L VN A P + G W++Q
Sbjct: 62 LDGAEWMGRDLKVNKARPREDRSGSGNWSSQ 92
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GG++ +E L AF +G++ D + +D+ T + R FGF+T+ E+A A+ +
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E ++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|195399065|ref|XP_002058141.1| GJ15655 [Drosophila virilis]
gi|194150565|gb|EDW66249.1| GJ15655 [Drosophila virilis]
Length = 340
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|340382462|ref|XP_003389738.1| PREDICTED: hypothetical protein LOC100632716 [Amphimedon
queenslandica]
Length = 433
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 52/79 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E++L F+ G + ++ P D+ TQ H+ +GFV F+ ++DA A
Sbjct: 11 QDATIYVGGLDEKVSESVLWELFLQAGPVVNIHIPRDRITQTHQGYGFVEFMGEDDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDI-KDVKTPLDQATQKHRSFGFVTFLE 59
M +L + N L++G L E++E +L+ F FG I + K D + + F FV F
Sbjct: 93 MKSLDIGAN-LFIGNLDPEIDEKMLYDIFSAFGVILQAPKIMRDVDSGGSKGFAFVNFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
+ + A++ M+G L R ++V+YA + KG G TW ER
Sbjct: 152 FDASDAAIEAMNGQYLCNRQVSVSYAFKKESKGERHG-----------TWEER 193
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYAL 86
+ M+ +LYG+ + VN AL
Sbjct: 71 IKIMNMIKLYGKPIRVNKAL 90
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++ L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIENLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|307167809|gb|EFN61250.1| Splicing factor 3B subunit 4 [Camponotus floridanus]
Length = 409
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|84999346|ref|XP_954394.1| rna-binding protein [Theileria annulata]
gi|65305392|emb|CAI73717.1| rna-binding protein, putative [Theileria annulata]
Length = 84
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K +++ G+A++V+ +L +AF FG I D+ P D+ T K+R FV + ++EDA A
Sbjct: 3 NKKKIFIRGIADDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFVEYEDEEDAKHA 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ N +ELYGR++ V Y+
Sbjct: 63 IFNRHNSELYGRIIKVGYS 81
>gi|357614441|gb|EHJ69078.1| spliceosomal protein on the X [Danaus plexippus]
Length = 334
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL + V E++L F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKVMNMIKLYGKPVRVNKA 89
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T ++F F+ F
Sbjct: 95 NLDVGAN-VFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKVMRDPETGNSKAFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+ L R ++V+YA + +KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGERHGSAAERLLA 196
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|241708466|ref|XP_002403282.1| spliceosome associated protein, putative [Ixodes scapularis]
gi|215505045|gb|EEC14539.1| spliceosome associated protein, putative [Ixodes scapularis]
Length = 408
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V++ IL F+ G + +V P D+ T H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDEKVSDTILWELFVQAGPVVNVHMPKDRVTGHHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNGQYLCNRAITISYAFKKDSKGERHGSAAERLLA 196
>gi|405117497|gb|AFR92272.1| cyclophilin [Cryptococcus neoformans var. grubii H99]
Length = 137
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD-QATQKHRSFGFVTFLEKEDAIQ 65
+K+++YV G A EV+E L AF+ FGDI ++K P + +KHR + F+TF DA +
Sbjct: 15 KKSSVYVSGFAPEVDEEQLLQAFVTFGDIIEIKIPHEPHDPKKHRGYAFITFSSAADAQE 74
Query: 66 AMDNMD-----GAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
A+DN D G + GR L + A P + E G + IW
Sbjct: 75 AIDNYDLNQLPGYQGSGRFLKCSLAQPSKYV-DESGRNDRAIW 116
>gi|332028466|gb|EGI68509.1| Splicing factor 3B subunit 4 [Acromyrmex echinatior]
Length = 410
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 87 GAATAAISEMDGKELNGRHIRVNPA 111
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ MD +LYG+ + VN A
Sbjct: 71 IKIMDMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|195133204|ref|XP_002011029.1| GI16317 [Drosophila mojavensis]
gi|193907004|gb|EDW05871.1| GI16317 [Drosophila mojavensis]
Length = 340
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|240848881|ref|NP_001155373.1| spliceosome associated protein-like [Acyrthosiphon pisum]
gi|239792048|dbj|BAH72409.1| ACYPI000210 [Acyrthosiphon pisum]
Length = 370
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V++ ++ F+ G + +V P D+ TQ H+ +GFV FL ++DA A
Sbjct: 11 QDATIYVGGLDEKVSDTLMWELFVQAGPVVNVHMPKDRVTQSHQGYGFVEFLAEDDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ +
Sbjct: 95 NLDVGAN-VFIGNLDSEVDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGFAFINYAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+G L R ++++YA + +KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNGQHLCNRAVSISYAFKKDVKGERHGSAAERLLA 196
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 53/88 (60%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V + ++VGGL+ ++ L AF +G++ + + +D T + + FGFVTF KE+A
Sbjct: 67 VSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASS 126
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGG 93
A+ +DG +L GR + NYA+ + +GG
Sbjct: 127 AIKALDGKDLGGRRIRCNYAVEKVARGG 154
>gi|383857497|ref|XP_003704241.1| PREDICTED: splicing factor 3B subunit 4-like [Megachile
rotundata]
Length = 413
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|350406084|ref|XP_003487648.1| PREDICTED: splicing factor 3B subunit 4-like [Bombus impatiens]
Length = 413
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|440684828|ref|YP_007159623.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
gi|428681947|gb|AFZ60713.1| RNP-1 like RNA-binding protein [Anabaena cylindrica PCC 7122]
Length = 102
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L A F +G +K V+ P D+ T K R FGFV E+ A+D
Sbjct: 2 SIYVGNLSYEVTQDNLTAVFAEYGSVKRVQLPTDRETGKLRGFGFVEMGTDEEETTAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|407033727|gb|EKE36960.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 112
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+GG+A E+NE + F FG++ D+ P + +H+ F F+T+ + + A+D
Sbjct: 37 NEIYIGGIASELNEGDMIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKDPRSCVLAID 96
Query: 69 NMDGAELYGRVLT 81
N +G EL GR LT
Sbjct: 97 NFNGIELNGRTLT 109
>gi|195060144|ref|XP_001995761.1| GH17589 [Drosophila grimshawi]
gi|193896547|gb|EDV95413.1| GH17589 [Drosophila grimshawi]
Length = 340
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AAF PFG I D + D T K + +GFV+FL K DA A+ M
Sbjct: 104 VFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGM 163
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + N+A
Sbjct: 164 NGQWLSGRAIRTNWA 178
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L +V EA + F G K K + + + FV F+E A A+
Sbjct: 15 TLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHG--GNDPYCFVEFVEHSHAAAALQT 72
Query: 70 MDGAELYGRVLTVNYA-LPERIK 91
M+G + G+ + VN+A P +K
Sbjct: 73 MNGRMILGKEVKVNWATTPSSMK 95
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+GG+ + E + F +G I++V+ D + + F+ F+ E A A+ +
Sbjct: 209 TVYIGGVTTGLTEGKMRETFSHYGHIQEVRIFPD------KGYAFIRFMTHESAAHAIVS 262
Query: 70 MDGAELYGRVLTVNYA 85
++G+++ G ++ ++
Sbjct: 263 VNGSQINGHMVKCSWG 278
>gi|112983328|ref|NP_001037646.1| spliceosomal protein on the X [Bombyx mori]
gi|109706833|gb|ABG43003.1| spliceosomal protein on the X [Bombyx mori]
Length = 342
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL + V E++L F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDRVTESLLWELFVQSGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKVMNMIKLYGKPVRVNKA 89
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T ++F F+ F
Sbjct: 95 NLDVGAN-VFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKVMRDPETGNSKAFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+ L R ++V+YA + +KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGERHGSAAERLLA 196
>gi|48097884|ref|XP_393914.1| PREDICTED: splicing factor 3B subunit 4 [Apis mellifera]
Length = 413
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 10 CFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNQA 84
>gi|427419212|ref|ZP_18909395.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425761925|gb|EKV02778.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 90
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V +A L AF +G +K V P D+ T + R FGFV + A++
Sbjct: 2 SIYVGNLSYDVTDADLTTAFAAYGTVKSVHLPTDRETGRMRGFGFVEMSTDSEEDAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP-ERIKGGEQGW 97
+DGAE GR L VN A P E GG + W
Sbjct: 62 LDGAEWMGRDLKVNKAKPRENRGGGRKSW 90
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N+ L F FGD+ D K D+ + + R FGFVTF +++ A++ M
Sbjct: 8 CFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEM 67
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGW 97
+G EL GRV+TVN A GG GW
Sbjct: 68 NGKELDGRVITVNEAQSRGSGGG--GW 92
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 8 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 67
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 68 GAATAAISEMDGKELNGRHIRVNPA 92
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ ++ + L AF PFG+I D + D TQK + +GFV+F K+DA A+ M
Sbjct: 106 IFVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTM 165
Query: 71 DGAELYGRVLTVNYA 85
DG+ L R + N+A
Sbjct: 166 DGSWLGSRAIRTNWA 180
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +G+I D K D+ T + R FGFVTF +E QA++ M
Sbjct: 8 CFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEM 67
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 68 NGKELDGRNITVNEAQSRR 86
>gi|380011609|ref|XP_003689892.1| PREDICTED: splicing factor 3B subunit 4-like [Apis florea]
Length = 413
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E+++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTESLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA KG G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKRDAKGERHGSAAERLLA 196
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL++G L+ V E ++ AF GD++ V+ P D+ T + FG+V F +DA A+
Sbjct: 294 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 353
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
M+GAE+ GR + V++A P++ G
Sbjct: 354 MNGAEIAGRAIRVDFAPPKQDNG 376
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ V+ L + F G++ + D+ +QK R FG+V F + E + +A++
Sbjct: 195 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK- 253
Query: 71 DGAELYGRVLTVNYA 85
DG+E+ GR + VNYA
Sbjct: 254 DGSEIDGRAIRVNYA 268
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL++G L+ V E ++ AF GD++ V+ P D+ T + FG+V F +DA A+
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKA 356
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
M+GAE+ GR + V++A P++ G
Sbjct: 357 MNGAEIAGRAIRVDFAPPKQDNG 379
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ V+ L + F G++ + D+ +QK R FG+V F + E + +A++
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESSAKAIEK- 256
Query: 71 DGAELYGRVLTVNYA 85
DG+E+ GR + VNYA
Sbjct: 257 DGSEIDGRAIRVNYA 271
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 87 GAATAAISEMDGKELNGRHIRVNPA 111
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 87 GAATAAISEMDGKELNGRHIRVNPA 111
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 87 GAATAAISEMDGKELNGRHIRVNPA 111
>gi|294461052|gb|ADE76094.1| unknown [Picea sitchensis]
Length = 150
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + NE +L AF +G+I +V+ +++A+ + FGFV F + DA+ A+ M
Sbjct: 37 LFVGGLSFDTNEKVLRDAFSLYGEILEVRVIINRASGLSKGFGFVQFASETDAVNALKEM 96
Query: 71 DGAELYGRVLTVNYA 85
DG L GR + VN+A
Sbjct: 97 DGQSLDGRNIRVNFA 111
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
+TL++G L+ + +E ++ AF G + +V+ P DQ T + FG+VTF EDA A D
Sbjct: 344 DTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYD 403
Query: 69 NMDGAELYGRVLTVNYALP 87
M GA++ GR + ++YA P
Sbjct: 404 AMMGADIAGRPVRLDYATP 422
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L+ +++ L+ F FG+I + D+AT + + FG+V F++ DA A+
Sbjct: 242 LFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAALAAK 301
Query: 71 DGAELYGRVLTVNYALP 87
GA + GR V+++ P
Sbjct: 302 KGALIDGREANVDFSTP 318
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
+TL++G L+ + +E ++ AF G + +V+ P DQ T + FG+VTF EDA A D
Sbjct: 370 DTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAYD 429
Query: 69 NMDGAELYGRVLTVNYALP 87
M GA++ GR + ++YA P
Sbjct: 430 AMMGADIAGRPVRLDYATP 448
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L+ +++ L+ F FG+I + D+AT + + FG+V F++ DA A+
Sbjct: 268 LFVGNLSWNIDDEWLYREFEEFGEISGARVISDKATGRSKGFGYVEFVKSSDAAAALAAK 327
Query: 71 DGAELYGRVLTVNYALP 87
GA + GR V+++ P
Sbjct: 328 KGALIDGREANVDFSTP 344
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL EVN+ +L+ F FG + D + T K + +GFVTF+ KEDA AM M
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR + VN+
Sbjct: 191 NGEKLEGRNIKVNWV 205
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 ANLAVQKNT--LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
++L + N+ ++V G+ E V+E +L F G + K D++ H +GFV F++
Sbjct: 34 SSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGV-HAGYGFVEFVD 92
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
A A DNMDG +YGR L VN++
Sbjct: 93 STTARFAKDNMDGRVVYGRELKVNWS 118
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GG++ +E L AF +G++ D + +D+ T + R FGF+T+ E+A A+ +
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF PFG++ K D+ T + R FGFVTF ++ +A+ +M
Sbjct: 7 CFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDM 66
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 67 NGKELDGRNITVNQA 81
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL EVN+ +L+ F FG + D + T K + +GFVTF+ KEDA AM M
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR + VN+
Sbjct: 191 NGEKLEGRNIKVNWV 205
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 2 ANLAVQKNT--LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
++L + N+ ++V G+ E V+E +L F G + K D++ H +GFV F++
Sbjct: 34 SSLPINANSKSVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGV-HAGYGFVEFVD 92
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
A A DNMDG +YGR L VN++
Sbjct: 93 STTARFAKDNMDGRVVYGRELKVNWS 118
>gi|357612263|gb|EHJ67888.1| spliceosomal protein on the X [Danaus plexippus]
Length = 259
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL + V E++L F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDRVTESLLWELFVQAGPVVNVHMPKDRVTQTHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKVMNMIKLYGKPVRVNKA 89
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T ++F F+ F
Sbjct: 95 NLDVGAN-VFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKVMRDPETGNSKAFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
E + A++ M+ L R ++V+YA + +KG G AA+
Sbjct: 152 FEASDAAIEAMNNQYLCNRPISVSYAFKKDVKGERHGSAAE 192
>gi|71032451|ref|XP_765867.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352824|gb|EAN33584.1| hypothetical protein TP01_0340 [Theileria parva]
Length = 84
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
K +++ GL+++V+ +L +AF FG I D+ P D+ T K+R F+ + ++EDA A
Sbjct: 3 NKKKIFIRGLSDDVDSNLLFSAFSQFGHITDLNIPKDKFTDKNRGIAFIEYEDEEDAKHA 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ N +ELYGR++ V Y+
Sbjct: 63 IFNRHNSELYGRIIKVGYS 81
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVG L ++V EAIL F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
E A A++ M+G L R +++++A + KG G AA+
Sbjct: 152 FEAADAALEAMNGQFLCNRAISISFAFKKDSKGERHGSAAE 192
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L A F PFG ++ V+ D T + + FGFV F E A +AM+ M
Sbjct: 282 LYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQM 341
Query: 71 DGAELYGRVLTVNYALPERIKG 92
+G EL GR + VN + ER G
Sbjct: 342 NGFELAGRPMKVN-TVSERTDG 362
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L++GGL+ ++A L AF FGD+ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG EL GR + VN A
Sbjct: 87 GAATAAISEMDGKELNGRHIRVNPA 111
>gi|409993905|ref|ZP_11277031.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|291569285|dbj|BAI91557.1| RNA-binding protein [Arthrospira platensis NIES-39]
gi|409935253|gb|EKN76791.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 103
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV E L A F +G +K VK P D+ T + R FGFV + + A+D
Sbjct: 2 SIYVGNLSYEVTEDDLTAVFAEYGSVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWCGRDLRVNKAKP 79
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
+ + A++ M+G L R +TV+YA + KG G AA+
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAE 192
>gi|351705667|gb|EHB08586.1| Splicing factor 3B subunit 4 [Heterocephalus glaber]
Length = 486
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL EVN+ +L+ F FG + D + T K + +GFVTF+ KEDA AM M
Sbjct: 131 IFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRKEDAETAMQMM 190
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR + VN+
Sbjct: 191 NGEKLEGRNIKVNWV 205
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+++V G+ E V+E +L F G + K D++ H +GFV F++ A A DN
Sbjct: 44 SVHVSGIHESVDEILLGRIFSIVGHVVSCKIMRDKSGT-HAGYGFVEFVDSTTARFAKDN 102
Query: 70 MDGAELYGRVLTVNYA 85
MDG +YGR L VN++
Sbjct: 103 MDGRVVYGRELKVNWS 118
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V E ++ F+ G + +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L F FG I ++TP D + + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLFDTFSAFGVI--LQTPKIMRDPDSGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + +++ M+G L R ++V+YA + +G G AA+ + A
Sbjct: 152 FDASDASIEAMNGQYLCNRPISVSYAFKKDSRGERHGSAAERLLA 196
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L+VGG++ + ++ L AF +G++ + + +D+ T + R FGFVT+ E+A
Sbjct: 36 CMSSSKLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYAL--PERI 90
A+ +DG +L+GR + VNYA P+R
Sbjct: 96 SAIQALDGQDLHGRRVRVNYATERPQRT 123
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ + + L AF +G++K V+ P D+ T + R F FV +++ A++
Sbjct: 2 SVYVGNLSYDATDEDLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIEG 61
Query: 70 MDGAELYGRVLTVNYALP--ERIKGGEQ 95
+DG+EL GR+L VN A P ER GG +
Sbjct: 62 LDGSELMGRILKVNKARPREERGSGGRR 89
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I D+K D T + + +GF+TF + EDA +A++ +
Sbjct: 262 LYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQL 321
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 322 NGFELAGRPMKVGHV 336
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GG++ +E L AF +G++ D + +D+ T + R FGF+T+ E+A A+ +
Sbjct: 44 LFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSAIQAL 103
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 104 DGQDLHGRPIRVNYA 118
>gi|171689536|ref|XP_001909708.1| hypothetical protein [Podospora anserina S mat+]
gi|170944730|emb|CAP70841.1| unnamed protein product [Podospora anserina S mat+]
Length = 219
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 33/167 (19%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--------------- 45
M++ K T+YVG L + + AF+PFG+I D+ P +
Sbjct: 47 MSDATRWKATIYVGNLPPQATLQTISEAFLPFGEIADISLPKNDGRGPNGADNKSNNNDF 106
Query: 46 -----------TQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA-LPERIKGG 93
HR F +V F ++ DA +A+DNMD AE++GR + V+ A +P+ + G
Sbjct: 107 LGNGPQQQQQQQSTHRGFAYVEFEDEADAKEAIDNMDQAEIFGRTIKVSAAKIPKSAQTG 166
Query: 94 EQGWAAQPIWADADTWFERQ--QQEEEMQRLQAENRA--AMQAAEEL 136
G + +W + + W +E+ + QA+NRA MQ E L
Sbjct: 167 GLG-SKTAVW-EQEGWLAENAVSEEDRLASEQAQNRADDPMQGLEGL 211
>gi|148906440|gb|ABR16373.1| unknown [Picea sitchensis]
Length = 413
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LY+G L+ VNEA L F FG++ +V+ +D+ Q + +G+V F + DA +A+ +M
Sbjct: 103 LYIGNLSRNVNEAHLKEIFSNFGEVVNVELSMDRVVQLPKGYGYVEFKTRSDAEKALLHM 162
Query: 71 DGAELYGRVLTVNYALPERIK 91
+G ++ G V++ + LP+R K
Sbjct: 163 NGGQVDGNVVSARFTLPQRTK 183
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +GD+ D K D+ T + R FGFVTF E QA++ M
Sbjct: 8 CFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 67
Query: 71 DGAELYGRVLTVNYALPER 89
+G +L GR +TVN A R
Sbjct: 68 NGQDLDGRNITVNEAQSRR 86
>gi|172035063|ref|YP_001801564.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354551929|ref|ZP_08971237.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171696517|gb|ACB49498.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353555251|gb|EHC24639.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG LA EV +A L+ F +G +K + P D+ T + R F FV +E+ +A+D
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRIHIPTDRETGRPRGFAFVEMDTEEEESKAIDT 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR + VN A P
Sbjct: 62 LDGAEWMGRSMKVNQARP 79
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A A ++ LYVG L+ E L F +G + D P D+ T +HR F FVT + +
Sbjct: 278 AAAAPKETKLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVT-MGPD 336
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPE 88
DA++A D DG EL GR+L VN A P+
Sbjct: 337 DALRAADETDGYELDGRILRVNEAQPK 363
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG L + L AAF FGD+ D P+D R FGF+ + ED+++A++ M
Sbjct: 198 IYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYDGNA-RGFGFIQ-MSDEDSLKAIEGM 255
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQP 101
+G E GR L VN +LP+ G++ AA P
Sbjct: 256 NGVEFDGRTLNVNKSLPK----GQRPAAAAP 282
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 29 FIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPE 88
F P V PL + T K R F FV +D A++ ++ +E+ GR + V+ +LP+
Sbjct: 117 FSPKRGGGSVDVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVSESLPK 176
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN L AAF FG+I + K D T K + +GFV+F KE+A +A++ M
Sbjct: 23 VFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVKENAQKAIEEM 82
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
+G + R + N+A+ R GGE+ P +
Sbjct: 83 NGQMIGRRQIRTNWAV-RRFDGGEENAMKPPTY 114
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
NL +N ++V GL V++ L+ F PFG++ K DQ T + R FGFVTF E
Sbjct: 4 GNLWRDRNKVFVAGLPVHVDDNALYEKFKPFGEMHQSKVVYDQKTGRSRGFGFVTFCEYT 63
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPE 88
+A+ A+D ++ ++ R L V + P+
Sbjct: 64 NALDAVDQLNQSKWEKRTLNVRFLQPK 90
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
T+YVG LA ++ E +L F G I+ V+ T++ R FG+V F E E +A
Sbjct: 119 TTIYVGNLAYDITEEVLRKVFDKCGSIRAVRFAEHIQTKEFRGFGYVQFHE-EGPCEAAV 177
Query: 69 NMDGAELYGRVLTVNYA 85
+DG + GR ++++Y
Sbjct: 178 KLDGMVVMGRPMSIDYG 194
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ ILH AF FG + + + D T + R
Sbjct: 149 NWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRSRG 208
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 209 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 242
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 75 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAADRAM 133
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 134 ATLNGRRVHQSEIRVNWAY 152
>gi|443717173|gb|ELU08367.1| hypothetical protein CAPTEDRAFT_163289 [Capitella teleta]
Length = 412
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++V+E+IL F+ G + +V P D+ +Q H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDDKVSESILWELFLQAGPVVNVHMPKDRISQAHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IRIMNMIKLYGKPIRVNKA 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+G L R ++++YA + KG G AA+ + A
Sbjct: 152 FETSDSAIEAMNGQYLCNRAISISYAFKKDSKGERHGSAAERLLA 196
>gi|168044555|ref|XP_001774746.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673901|gb|EDQ60417.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N+++VGGL+ E +E + AFI FG++ VK D+ + + R FGFV+F A A+
Sbjct: 5 NSVHVGGLSYESSEDAVKKAFIEFGEVVSVKIVYDRESGESRGFGFVSFTNPRSATMAIR 64
Query: 69 NMDGAELYGRVLTVN 83
+MDG ++ GR + VN
Sbjct: 65 DMDGGQIEGRTIRVN 79
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V EA+L F+ G + + P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 11 QDATVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 71 IKVLNMIKLYGKPVRVNKA 89
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D + + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDVESGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E A A++ M+G L R +T+++A + +G G AA+ + A
Sbjct: 152 FEAADAAIEAMNGQYLCNRAITISFAFKKDSRGERHGSAAERLLA 196
>gi|17530817|ref|NP_511058.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|7290689|gb|AAF46136.1| spliceosomal protein on the X [Drosophila melanogaster]
gi|68051249|gb|AAY84889.1| RE50839p [Drosophila melanogaster]
gi|220952204|gb|ACL88645.1| Spx-PA [synthetic construct]
Length = 347
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYG 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA--DADTWFERQQQ 115
E + AMD M+G L R ++V+YA + KG G AA+ + A + T +R Q
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLAAQNPSTHADRPHQ 209
>gi|25141353|ref|NP_740829.1| Protein RNP-6, isoform c [Caenorhabditis elegans]
gi|373220166|emb|CCD72566.1| Protein RNP-6, isoform c [Caenorhabditis elegans]
Length = 346
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWF 110
+G L GR L VN + + ++ + AQPI DA +F
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
>gi|302762759|ref|XP_002964801.1| hypothetical protein SELMODRAFT_406315 [Selaginella
moellendorffii]
gi|300167034|gb|EFJ33639.1| hypothetical protein SELMODRAFT_406315 [Selaginella
moellendorffii]
Length = 127
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYV GLA V++ L AF FGD+ D K + T + + FGFVTF +++A +A+++M
Sbjct: 22 LYVNGLAWGVDDLSLRGAFEEFGDVIDTKVMTNPDTGRSKGFGFVTFKREDEAKEALESM 81
Query: 71 DGAELYGRVLTVNYA 85
DG + GR + V+YA
Sbjct: 82 DGKDFAGRSIRVDYA 96
>gi|268564468|ref|XP_002639117.1| C. briggsae CBR-RNP-6 protein [Caenorhabditis briggsae]
Length = 744
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWF 110
+G L GR L VN + + ++ + AQPI DA +F
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
>gi|413933427|gb|AFW67978.1| hypothetical protein ZEAMMB73_339087 [Zea mays]
Length = 311
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
++ ++VGGL+ + +E L AF FG + DV+ L++ T +HR FGFVTF ++ A
Sbjct: 5 EEGRIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRAVDSA 64
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ M G EL GR ++VN A P+
Sbjct: 65 IKEMRGQELDGRTISVNKAEPK 86
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 6/101 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
+ + A++ M+G L R +TV+YA + KG G AA+
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAE 192
>gi|358339847|dbj|GAA31298.2| peptidyl-prolyl isomerase E (cyclophilin E) [Clonorchis sinensis]
Length = 289
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 5/66 (7%)
Query: 47 QKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADA 106
+KHR F F+ F E EDA+ A+DNM+ +E++GR + VN A P RI+ +GW ++P+W+D
Sbjct: 23 EKHRGFAFIEFEEMEDAMSAIDNMNESEIFGRTIRVNVARPVRIR---EGW-SRPVWSD- 77
Query: 107 DTWFER 112
+ W ++
Sbjct: 78 ENWLKK 83
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis
carolinensis]
Length = 417
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + +++GG++ + ++ L AF +G++ + + +D+ T + R FGFVT+ E+A
Sbjct: 36 CMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYAL--PER 89
A+ MDG +L+GR + VNYA P+R
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYATERPQR 122
>gi|17510027|ref|NP_491177.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
gi|373220164|emb|CCD72564.1| Protein RNP-6, isoform a [Caenorhabditis elegans]
Length = 339
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWFERQQQEEEMQRLQAEN 126
+G L GR L VN + + ++ + AQPI DA +F + +
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 127 RAAMQAAEELHRKKMAEDREG 147
++ +A E+ + ++A G
Sbjct: 224 KSVFEAFGEIVKCQLARAPTG 244
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q + ++VG L+ ++ L F+PFG+I D K D T K + +GFV+F+EK DA A
Sbjct: 106 QHHHIFVGDLSPDITTETLKNVFVPFGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTA 165
Query: 67 MDNMDGAELYGRVLTVNYA 85
++ M+G L R + N+A
Sbjct: 166 IEQMNGQWLGSRAIRTNWA 184
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|209528246|ref|ZP_03276711.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|376004999|ref|ZP_09782569.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|423065550|ref|ZP_17054340.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
gi|209491318|gb|EDZ91708.1| RNP-1 like RNA-binding protein [Arthrospira maxima CS-328]
gi|375326593|emb|CCE18322.1| Glycine-rich RNA-binding protein, rbp-like [Arthrospira sp. PCC
8005]
gi|406712993|gb|EKD08168.1| RNP-1 like RNA-binding protein [Arthrospira platensis C1]
Length = 100
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV E L A F +G +K VK P D+ T + R FGFV + + A+D
Sbjct: 2 SIYVGNLSYEVTEEDLTAVFAEYGAVKRVKLPTDRETGRMRGFGFVEMDTEAEEQSAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWCGRDLRVNKAKP 79
>gi|17510025|ref|NP_491176.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
gi|373220165|emb|CCD72565.1| Protein RNP-6, isoform b [Caenorhabditis elegans]
Length = 749
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWFERQQQEEEMQRLQAEN 126
+G L GR L VN + + ++ + AQPI DA +F + +
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETDL 223
Query: 127 RAAMQAAEELHRKKMAEDREG 147
++ +A E+ + ++A G
Sbjct: 224 KSVFEAFGEIVKCQLARAPTG 244
>gi|358341377|dbj|GAA49074.1| peptidyl-prolyl isomerase E (cyclophilin E) [Clonorchis sinensis]
Length = 226
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 15/73 (20%)
Query: 14 GGLAEEVNEAILHAAFIPFGDIKDVKTPLDQAT---------------QKHRSFGFVTFL 58
GGLA++V+ +L AAFIPFGDI + P+D T +KHR F F+ F
Sbjct: 14 GGLADQVDLPLLRAAFIPFGDIVSINMPMDYQTGRCQICMTHAPTELLEKHRGFAFIEFE 73
Query: 59 EKEDAIQAMDNMD 71
E EDA+ A+DNM+
Sbjct: 74 EMEDAMSAIDNMN 86
>gi|403358378|gb|EJY78834.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 403
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 50/80 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+GGL +NE + F FG++ D + DQ T K + F F+ + +++ + A+DN+
Sbjct: 35 IYIGGLNYRMNEGDIAIVFSQFGEVVDCRLARDQKTGKSKGFAFLAYEDQKSTVLAVDNL 94
Query: 71 DGAELYGRVLTVNYALPERI 90
+G +L GR+++V++ + +I
Sbjct: 95 NGIDLCGRLISVDHVMQYKI 114
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 52/81 (64%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+++ + ++VGG++ ++ L AF +G++ + + +D+ T + R FGFVT+ E+A
Sbjct: 39 SMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEAS 98
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 99 SAIQALDGQDLHGRRVRVNYA 119
>gi|268529722|ref|XP_002629987.1| C. briggsae CBR-SAP-49 protein [Caenorhabditis briggsae]
Length = 370
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+EAIL + G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 71 IKILNMIKLYGKPIKVNKA 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLE 59
N+ V N ++VG L EV+E +L+ F FG I V + D T K F F+ F
Sbjct: 95 NMDVGAN-IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSK--GFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
E + + ++ M G L R +TV+YA KG G AA+ + A + F + + +
Sbjct: 152 FEASDRGLEAMRGQFLCNRAITVSYAFKRDSKGERHGTAAERMLASQNPLFPKDRPHQ 209
>gi|411117881|ref|ZP_11390262.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711605|gb|EKQ69111.1| RRM domain-containing RNA-binding protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 100
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV E L A F +G +K V+ P D+ T + R FGFV + A+D
Sbjct: 2 SIYVGNLSYEVTEDDLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMSADAEEDAAIDA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
+DGAE GR L VN A P +G G
Sbjct: 62 LDGAEWMGRDLKVNKAKPRENRGNSFG 88
>gi|405122146|gb|AFR96913.1| RNA-binding protein [Cryptococcus neoformans var. grubii H99]
Length = 508
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVGGL E+ E L F +G+I DV D+ T K R FGF+ + ++ + A+DNM
Sbjct: 162 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 221
Query: 71 DGAELYGRVLTVNYALPERIKG 92
+G ++ GR L V++ R +G
Sbjct: 222 NGTQIIGRTLKVDHTRNYRQQG 243
>gi|195340414|ref|XP_002036808.1| GM12470 [Drosophila sechellia]
gi|194130924|gb|EDW52967.1| GM12470 [Drosophila sechellia]
Length = 299
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+Y GGL ++V+E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA
Sbjct: 11 QDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDADYG 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T K +SF F+ F
Sbjct: 95 NLDVGAN-IFIGNLDVEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGKSKSFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + AMD M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDAAMDAMNGQYLCNRPISVSYAFKKDHKGERHGSAAERLLA 196
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AFIPFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 133 VFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 193 NGQWLGRRTIRTNWA 207
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ N + + TLYVG L V+E + F G + K D A + FV F +
Sbjct: 34 LGNGSDEPRTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDP---YAFVEFSDH 90
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYAL 86
A QA+ M+ L+ R + VN+A+
Sbjct: 91 GQASQALQTMNKRLLHDREMKVNWAV 116
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + ++VGG++ +E L AF +G++ D K +D+ T + R F FVTF E+A
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
AM +DG +L+GR + VNYA
Sbjct: 90 NAM-QLDGQDLHGRRIRVNYA 109
>gi|341882558|gb|EGT38493.1| hypothetical protein CAEBREN_09163 [Caenorhabditis brenneri]
Length = 757
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWF 110
+G L GR L VN + + ++ + AQPI DA +F
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
++ + L+VGGL+ +E L AF G++ + + +D+ T + R FGFV+F E+A
Sbjct: 36 SMSSSKLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAA 95
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 96 SALTALDGQDLHGRQIRVNYA 116
>gi|341895702|gb|EGT51637.1| CBN-RNP-6 protein [Caenorhabditis brenneri]
Length = 757
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E +L AF PFG IK + D AT H++F FV + E A+ A ++M
Sbjct: 104 IYVGSISFEIREDMLRKAFDPFGPIKSINMSWDPATGHHKTFAFVEYEIPEAALLAQESM 163
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW----ADADTWF 110
+G L GR L VN + + ++ + AQPI DA +F
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYF 207
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL ++ E +L F+ G + +V P D+ TQ H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLEKEDAIQAM 67
+++G L EV+E +L+ F FG I ++TP D T + F F+ F E + AM
Sbjct: 102 IFIGNLDLEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFINFASFEASDAAM 159
Query: 68 DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
D M+G L R ++V+YA + KG G AA+ + A
Sbjct: 160 DAMNGQYLCNRPISVSYAFKKDSKGERHGSAAERLLA 196
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 52/81 (64%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+++ + ++VGG++ ++ L AF +G++ + + +D+ T + R FGFVT+ E+A
Sbjct: 39 SMESSKVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEAS 98
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ +DG +L+GR + VNYA
Sbjct: 99 SAIQALDGQDLHGRRVRVNYA 119
>gi|168034546|ref|XP_001769773.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678882|gb|EDQ65335.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 2 ANLAVQK----NTLYVG-GLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVT 56
A L VQ+ + L++G GLA +E L AF FG + +VK LD+ T + R FGFV
Sbjct: 34 AMLVVQRMMSSSKLFIGAGLAWATDENTLRDAFSSFGTVTEVKIILDRDTGRSRGFGFVN 93
Query: 57 FLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
F E+A A+ MDG EL GR + V+YA
Sbjct: 94 FTSPEEAEVALQEMDGRELAGRQIRVDYA 122
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG LA EV+ L AAF FG+I + K D T K +S+GFV+F KE+A +A++ M
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
+G + R + N+A+ R GGE+ +A +P D
Sbjct: 193 NGQMIGRRPIRTNWAV-RRFDGGEE-YAMKPPTYD 225
>gi|67481301|ref|XP_656000.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473172|gb|EAL50615.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703174|gb|EMD43668.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 112
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+GG+A E+NE + F FG++ D+ P + +H+ F F+T+ + + A+D
Sbjct: 37 NEIYIGGIASELNEGDIIIVFSQFGEVIDINMPWNNERDEHKGFCFLTYKDPRSCVLAID 96
Query: 69 NMDGAELYGRVLT 81
N +G EL G+ LT
Sbjct: 97 NFNGIELNGKTLT 109
>gi|58258319|ref|XP_566572.1| cyclophilin [Cryptococcus neoformans var. neoformans JEC21]
gi|134106213|ref|XP_778117.1| hypothetical protein CNBA1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260820|gb|EAL23470.1| hypothetical protein CNBA1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222709|gb|AAW40753.1| cyclophilin, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 135
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 7/103 (6%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLD-QATQKHRSFGFVTFLEKEDAIQ 65
+K+++YV G A EV+E L AF+ FGDI ++K P + +KHR + F+TF DA +
Sbjct: 15 KKSSVYVSGFAPEVDEEQLLQAFVTFGDIIEIKIPHEPHDPKKHRGYAFITFSSAADAQE 74
Query: 66 AMDNMD-----GAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
A+DN D G + G+ L + A P + E G + IW
Sbjct: 75 AIDNYDLNQLPGYQGSGKFLKCSLAQPSKYV-DESGRNDRAIW 116
>gi|359482021|ref|XP_002276063.2| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Vitis vinifera]
gi|297740158|emb|CBI30340.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ E L F +G + + K +D+ + + + FGFVTF +E+A +A M
Sbjct: 36 LFVGGLSFYTTEKGLSEHFSQYGQVVEAKIVMDRVSDRSKGFGFVTFASEEEAQKARTEM 95
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADT 108
DG EL GR + V+YA P GG A P AD+
Sbjct: 96 DGKELNGRTIFVDYAKPRADFGGGMPIARGPPEPTADS 133
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|158340529|ref|YP_001521523.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310770|gb|ABW32384.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 91
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L A F +G++ +V P D+ T K R F FV D ++A+++
Sbjct: 2 SIYVGNLSYEVAQEDLRAIFSEYGEVTNVHLPKDRETGKLRGFAFVDLGNDADEVKAIED 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRSLKVNKARP 79
>gi|426218619|ref|XP_004003540.1| PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase
E-like [Ovis aries]
Length = 236
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 29/104 (27%)
Query: 5 AVQKNT-LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+VQK ++VGGL EE+++ +LHAAFIPFGDI ++ LD T +
Sbjct: 33 SVQKALGVFVGGLGEEMDDNVLHAAFIPFGDITGIQLLLDYGTNE--------------- 77
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
+EL+G+ + V A PER+K G + +P+W+D D
Sbjct: 78 ---------SELFGQTIRVTLAKPERVKEG----SPRPVWSDDD 108
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ ++ L AF FG++ D K D+ T + R FGFVTF++++ A++ M
Sbjct: 10 CFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 70 NGRDLDGRNITVNRA 84
>gi|443916812|gb|ELU37760.1| RNA-binding protein Cwf29 [Rhizoctonia solani AG-1 IA]
Length = 933
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+++GGL ++ E + F +G+I DV P D+ T K R FGF+ + ++ + A+DN+
Sbjct: 34 VFIGGLHVDMTEGDVITIFSQYGEIMDVNLPRDKTTGKQRGFGFLMYEDQRSTVLAVDNL 93
Query: 71 DGAELYGRVLTV----NYALPERIKG--------GEQGWAAQP--IWADAD 107
+GA++ GR L V NY P ++KG EQ A+P I+ DA+
Sbjct: 94 NGAQVLGRTLRVDHVQNYKQP-KVKGEDGEMEETAEQSLNAKPQMIYDDAE 143
>gi|45360881|ref|NP_989116.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|38512254|gb|AAH61357.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
gi|89268695|emb|CAJ83013.1| splicing factor 3b, subunit 4, 49kDa [Xenopus (Silurana)
tropicalis]
Length = 388
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|384500250|gb|EIE90741.1| hypothetical protein RO3G_15452 [Rhizopus delemar RA 99-880]
Length = 246
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q+ T+YVG L E E+++ + G + +V P D+ TQ H+++GFV FL +EDA A
Sbjct: 9 QEATVYVGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADYA 68
Query: 67 MDNMDGAELYGRVLTVNYALPER 89
M M+ LYG+ + VN A +R
Sbjct: 69 MRVMNQVRLYGKPVRVNKATSDR 91
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLEKEDAIQA 66
TL++G L EV+E +L+ F FG I V TP D T + FGF++F E + A
Sbjct: 99 TLFIGNLDPEVDEKLLYDTFSAFGLI--VNTPRVSRDPDTGALKGFGFISFDNFESSDAA 156
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQG 96
++ MDG L + +T++YA + KG G
Sbjct: 157 IEAMDGQYLMNKQITISYAYKKDGKGERHG 186
>gi|308510552|ref|XP_003117459.1| CRE-SAP-49 protein [Caenorhabditis remanei]
gi|308242373|gb|EFO86325.1| CRE-SAP-49 protein [Caenorhabditis remanei]
Length = 389
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+EAIL + G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVSEAILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 71 IKILNMIKLYGKPIKVNKA 89
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L+ F FG I V K D + + F F+ F E
Sbjct: 95 NMDVGAN-IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA KG G AA+ + A + F + + +
Sbjct: 154 ASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQ 209
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|52694662|ref|NP_705947.3| splicing factor 3B subunit 4 [Danio rerio]
gi|34193906|gb|AAH56532.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|45768679|gb|AAH67655.1| Splicing factor 3b, subunit 4 [Danio rerio]
gi|94733748|emb|CAK11461.1| splicing factor 3b, subunit 4 [Danio rerio]
Length = 400
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|58271546|ref|XP_572929.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115110|ref|XP_773853.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256481|gb|EAL19206.1| hypothetical protein CNBH3050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229188|gb|AAW45622.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 373
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVGGL E+ E L F +G+I DV D+ T K R FGF+ + ++ + A+DNM
Sbjct: 33 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 92
Query: 71 DGAELYGRVLTVNYALPERIKG 92
+G ++ GR L V++ R +G
Sbjct: 93 NGTQVIGRTLKVDHTRNYRQQG 114
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|297806401|ref|XP_002871084.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
gi|297316921|gb|EFH47343.1| hypothetical protein ARALYDRAFT_487209 [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A + + ++VGGL+ EV E L AF FGDI D + L++ T + R FGF+TF ++
Sbjct: 3 AKEGSRIFVGGLSPEVTERDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMD 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPE 88
+++ M G + RV++VN A P+
Sbjct: 63 ESIREMHGRDFGDRVISVNRAEPK 86
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|148229719|ref|NP_001086794.1| MGC82420 protein [Xenopus laevis]
gi|50604232|gb|AAH77458.1| MGC82420 protein [Xenopus laevis]
Length = 383
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ +
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINYAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|428203044|ref|YP_007081633.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427980476|gb|AFY78076.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 103
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV EA L++ F +G +K V P D+ T + R F FV A++
Sbjct: 2 SIYVGNLSYEVTEAELNSVFAEYGSVKRVHLPTDRETGRMRGFAFVEMETTAQEAAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE YGR L VN A P
Sbjct: 62 LDGAEWYGRELKVNQAKP 79
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG LA + L +AF FGD+ D D+ T + R FGF+TF E+ DA A++ +
Sbjct: 10 LFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEAL 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VNYA
Sbjct: 70 NGQELDGREIRVNYA 84
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Felis catus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 5 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 64
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 65 IKIMNMIKLYGKPIRVNKA 83
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 89 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 145
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 146 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 190
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM
3776]
Length = 104
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L +VN + L F FG+++ + +D+ T + + FGFV F + + A A++ M
Sbjct: 5 LYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAINAM 64
Query: 71 DGAELYGRVLTVNYALP 87
+G ++ GR LTVN A P
Sbjct: 65 NGKDVNGRALTVNEARP 81
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMQDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 14 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 72
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 73 MNGKELDGRNITVNEA 88
>gi|301789695|ref|XP_002930273.1| PREDICTED: splicing factor 3B subunit 4-like, partial [Ailuropoda
melanoleuca]
Length = 252
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|148226626|ref|NP_001080100.1| splicing factor 3b, subunit 4, 49kDa [Xenopus laevis]
gi|28374170|gb|AAH45264.1| Spx-prov protein [Xenopus laevis]
Length = 377
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ +
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINYAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|86608641|ref|YP_477403.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557183|gb|ABD02140.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 94
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T++VG L+ + +E L F +G +K +K P+D+ T + R F FV + D +A+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFAEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 70 MDGAELYGRVLTVNYALPERIK-GGEQGWAAQ 100
+DGA GR L VN ALP + GG G +++
Sbjct: 62 LDGATWMGRDLRVNKALPRQTSAGGRDGRSSR 93
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V E +L FI G + + P D+ TQ H+ +GFV FL ++DA A
Sbjct: 9 QDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYA 68
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +L+G+ + VN A
Sbjct: 69 IKILNMIKLFGKPVRVNKA 87
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N L++G L E++E +L+ F FG I ++TP D T + F F+ +
Sbjct: 93 NLDVGAN-LFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGFAFINYSS 149
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E A A++ M+G L R +T+++A + KG G AA+ + A
Sbjct: 150 FEAADAALEAMNGQYLCNRPITISFAFKKDGKGERHGSAAERLLA 194
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + L + F +G+I D K D+ T + R FGFVTF DA A M
Sbjct: 10 LFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAANAKKCM 69
Query: 71 DGAELYGRVLTVNYA 85
DG EL R + V+YA
Sbjct: 70 DGTELDSRQIRVDYA 84
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 71
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 72 MNGKELDGRNITVNEA 87
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 71
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 72 MNGKELDGRNITVNEA 87
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan
troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V E +L FI G + + P D+ TQ H+ +GFV FL ++DA A
Sbjct: 9 QDATVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYA 68
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +L+G+ + VN A
Sbjct: 69 IKILNMIKLFGKPVRVNKA 87
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N L++G L E++E +L+ F FG I ++TP D T + F F+ +
Sbjct: 93 NLDVGAN-LFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGFAFINYSS 149
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E A A++ M+G L R +T+++A + KG G AA+ + A
Sbjct: 150 FEAADAALEAMNGQYLCNRPITISFAFKKDGKGERHGSAAERLLA 194
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG LA EV+ L AAF FG+I + K D T K +S+GFV+F KE+A +A++ M
Sbjct: 133 VFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIEKM 192
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWAD 105
+G + R + N+A+ R GGE+ +A +P D
Sbjct: 193 NGQMIGRRPIRTNWAV-RRFDGGEE-YAMKPPTYD 225
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 49/75 (65%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ +++ L +F +G++ + + D+ T + R FGF++F E+A A+ M
Sbjct: 42 LFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITGM 101
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR++ VNYA
Sbjct: 102 DGKDLHGRLVHVNYA 116
>gi|126660986|ref|ZP_01732073.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126617726|gb|EAZ88508.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 81
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG LA EV +A L+ F +G +K V P D+ T + R F FV +E+ +A++
Sbjct: 2 SIYVGNLAYEVTDADLNTVFSDYGSVKRVHIPTDRETGRPRGFAFVEMNTEEEESKAIET 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR + VN A P
Sbjct: 62 LDGAEWMGRSMKVNQARP 79
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L +T++YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNCPITISYAFRKDSKGERHGSAAERLLA 196
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|218245910|ref|YP_002371281.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058958|ref|YP_003136846.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218166388|gb|ACK65125.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256589124|gb|ACV00011.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 98
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG LA E+ E L F +G +K V P+D+ TQK R FGFV + A+
Sbjct: 2 SIYVGNLAYEITEEDLTQVFAEYGTVKRVHLPVDRETQKMRGFGFVEMASDDQEDAAIAQ 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRQLKVNKARP 79
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF PFG++ K D+ T + R FGFVTF ++ +A+ +M
Sbjct: 4 CFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDM 63
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 64 NGKELDGRNITVNQA 78
>gi|441636543|ref|XP_004093131.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4
[Nomascus leucogenys]
Length = 372
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 15 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 73
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 74 MNGKELDGRNITVNEA 89
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGL+ N+ L AF FGD+ + D+ T + R FGFV F + A
Sbjct: 32 CMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSVDSAS 91
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ MDG EL+GR + V+YA
Sbjct: 92 SALSAMDGQELHGRNIRVSYA 112
>gi|322705004|gb|EFY96593.1| splicing factor 3b subunit 4 [Metarhizium anisopliae ARSEF 23]
Length = 383
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A ++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +L+G+ L VN A ++ KG + G
Sbjct: 74 MNGIKLFGKSLRVNKASADKQKGADIG 100
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E +L+ F FG + + + + FGFV+F + E + A+ N+
Sbjct: 103 LFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDDSGMSKGFGFVSFGDFESSDAAVANL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
DG + + ++V YA + KG G
Sbjct: 163 DGQYMLSKEVSVQYAFKKDGKGERHG 188
>gi|392409536|ref|YP_006446143.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
gi|390622672|gb|AFM23879.1| RRM domain-containing RNA-binding protein [Desulfomonile tiedjei
DSM 6799]
Length = 103
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+YVG L+ NE L F FG + K DQ T + R FGFV +ED ++A++N
Sbjct: 4 NIYVGNLSFNANEGELRELFEQFGSVDSAKIITDQFTGRSRGFGFVEMSNREDGLRAIEN 63
Query: 70 MDGAELYGRVLTVNYALPER 89
+D + GR L VN A P++
Sbjct: 64 LDSKDFSGRSLKVNEARPKK 83
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+G L+ +VNE IL+ F G++ D K D+ T + R FGF+TF + +A A+ ++
Sbjct: 218 VYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRETGRSRGFGFITFSTQSEAEAAVASL 277
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR + V+ AL R
Sbjct: 278 NGKELEGRAMRVDLALSSR 296
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+G L + A L G ++ V+ DQ T + R F F T EDA ++N+
Sbjct: 113 VYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAFATMSSVEDANALVENL 172
Query: 71 DGAELYGRVLTVN 83
DG++ GR L VN
Sbjct: 173 DGSQYGGRTLRVN 185
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 9 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 68
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 69 IKIMNMIKLYGKPIRVNKA 87
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 93 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 149
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 150 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 194
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M
Sbjct: 10 CFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|432882405|ref|XP_004074014.1| PREDICTED: splicing factor 3B subunit 4-like [Oryzias latipes]
Length = 344
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ ++A L AF FG++ D K +D+ T + R FGFV F ++
Sbjct: 28 LGSLRLMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDE 87
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG +L GR + VN A
Sbjct: 88 TAASAAISEMDGKDLNGRNIRVNPA 112
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVGGL ++V E++L F+ G + +V P D+ T H+ +GFV F+ +EDA A+
Sbjct: 14 TIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEEDADYAIKI 73
Query: 70 MDGAELYGRVLTVNYA 85
M+ +LYG+ + VN A
Sbjct: 74 MNMIKLYGKPIRVNKA 89
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + +++ M+G L R ++V+YA + KG G AA+ + A
Sbjct: 152 FEASDASIEAMNGQYLCNRPISVSYAFKKDSKGERHGSAAERLLA 196
>gi|339244657|ref|XP_003378254.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316972855|gb|EFV56501.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 432
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E V+E IL F+ G I V P D+ + H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDERVSETILWELFVQAGPIVSVHMPKDRISSTHQGYGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
NL + N +++G L EV+E +L+ F FG + V K D T + F F+ F E
Sbjct: 95 NLDIGAN-VFIGNLDPEVDEKLLYDTFSAFGVLLQVPKIMRDPETGNSKGFAFINFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWF 110
+ A++ M+G L R ++ +YA + KG G AA+ + A + F
Sbjct: 154 ASDAAIEAMNGQYLCNRPISASYAFKKDAKGERHGTAAERLLAAQNPIF 202
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + ++VGG++ +E L AF +G++ D K +D+ T + R F FVTF E+A
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
AM +DG +L+GR + VNYA
Sbjct: 90 NAM-QLDGQDLHGRRIRVNYA 109
>gi|414075426|ref|YP_006994744.1| RNA-binding protein [Anabaena sp. 90]
gi|413968842|gb|AFW92931.1| RNA-binding protein [Anabaena sp. 90]
Length = 108
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L A F +G +K V+ P D+ T + R FGFV + + A+D
Sbjct: 2 SIYVGNLSYEVTQEALSAVFADYGAVKRVQLPTDRETGRLRGFGFVEMGTEAEEQAAIDA 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR+L VN A P+
Sbjct: 62 LDGAEWMGRLLKVNKAKPK 80
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 12 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 70
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 71 MNGKELDGRNITVNEA 86
>gi|380481860|emb|CCF41594.1| splicing factor 3B subunit 4 [Colletotrichum higginsianum]
Length = 257
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E + A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQKQAEVG 100
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V+E IL+ F FG + ++ + + + FGF+++ + E + A+ N+
Sbjct: 103 LFVGNLDPMVDEKILYDTFSRFGPLVNLPKVAREDSGNSKGFGFISYADFESSDAAISNL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G + + ++V YA + KG G AA+
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGERHGDAAE 192
>gi|348513245|ref|XP_003444153.1| PREDICTED: splicing factor 3B subunit 4-like [Oreochromis
niloticus]
Length = 401
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 68
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 69 MNGKELDGRNITVNEA 84
>gi|16332012|ref|NP_442740.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|383323755|ref|YP_005384609.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326924|ref|YP_005387778.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492808|ref|YP_005410485.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438076|ref|YP_005652801.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451816164|ref|YP_007452616.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|15214210|sp|Q57014.3|RBPA_SYNY3 RecName: Full=Putative RNA-binding protein RbpA
gi|1001324|dbj|BAA10811.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|1161274|gb|AAA85379.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|339275109|dbj|BAK51596.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|359273075|dbj|BAL30594.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276245|dbj|BAL33763.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279415|dbj|BAL36932.1| RNA binding protein [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960353|dbj|BAM53593.1| RNA binding protein [Synechocystis sp. PCC 6803]
gi|451782133|gb|AGF53102.1| RNA binding protein [Synechocystis sp. PCC 6803]
Length = 101
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V+EA L A F +G +K V+ P D+ T + R FGFV + A++
Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|358337762|dbj|GAA56093.1| splicing factor 3B subunit 4 [Clonorchis sinensis]
Length = 363
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+ E+IL F+ G + +V P D+ T +H+ +GFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKTTESILWELFLQAGPVVNVHMPKDRITMQHQGYGFVEFMTEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
M M+ +L+G+ + VN A
Sbjct: 71 MRIMNMIKLFGKPIRVNKA 89
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL + N +++G L EV+E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDIGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FEASDAAIEAMNGQYLCNRAITISYAFKKDSKGERHGSAAERLLA 196
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 20 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 78
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 79 MNGKELDGRNITVNEA 94
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 20 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 78
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 79 MNGKELDGRNITVNEA 94
>gi|427709160|ref|YP_007051537.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427361665|gb|AFY44387.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV E L A F +G +K ++ P D+ T + R FGFV + A++
Sbjct: 2 SVYVGNLSYEVTEDSLSAVFAEYGSVKRIQLPTDRETGRMRGFGFVEMGTDAEETSAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
+DGAE GR L VN A P+ +G
Sbjct: 62 LDGAEWMGRDLKVNKAKPKEDRG 84
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 68
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 69 MNGKELDGRNITVNEA 84
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 10 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 68
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 69 MNGKELDGRNITVNEA 84
>gi|322696259|gb|EFY88054.1| splicing factor 3b subunit 4 [Metarhizium acridum CQMa 102]
Length = 578
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A ++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 34 TIYIGNIDERATTATIYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAANV 93
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +L+G+ L VN A ++ KG + G
Sbjct: 94 MNGIKLFGKSLRVNKASADKQKGADIG 120
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
L++G L V+E +L+ F FG + + + + FGFV+F + E + A+ N
Sbjct: 284 VLFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDDSGMSKGFGFVSFGDFESSDAAVAN 343
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
+DG + + ++V YA + KG G
Sbjct: 344 LDGQYMLSKEVSVQYAFKKDGKGERHG 370
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E +L+ F FG + + + + FGFV+F + E + A+ N+
Sbjct: 123 LFIGNLDPMVDEKLLYDTFSRFGPLLSLPKVARDDSGMSKGFGFVSFGDFESSDAAVANL 182
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
DG + + ++V YA + KG G
Sbjct: 183 DGQYMLSKEVSVQYAFKKDGKGERHG 208
>gi|310792398|gb|EFQ27925.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 361
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E + A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TIYIGNIDERASPAMVYEVMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPSDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQKQAEVG 100
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V+E IL+ F FG + + + + + FGF+++ + E + A+ N+
Sbjct: 103 LFVGNLDPMVDEKILYDTFSRFGPLITLPKVAREDSGNSKGFGFISYADFESSDAAIANL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G + + ++V YA + KG G AA+
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGERHGDAAE 192
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
gi|297333373|gb|EFH63791.1| hypothetical protein ARALYDRAFT_476560 [Arabidopsis lyrata subsp.
lyrata]
Length = 292
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + ++VGG++ +E L AF +G++ D K +D+ T + R F FVTF E+A
Sbjct: 30 CMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEAS 89
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
AM +DG +L+GR + VNYA
Sbjct: 90 NAM-QLDGQDLHGRRIRVNYA 109
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG+++ V D AT R + FV F + + A +AM N+
Sbjct: 252 LYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANL 311
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + VNY
Sbjct: 312 NGFELAGRPMKVNYG 326
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ L AF PFGDI D + D T K + +GFV+F++K DA A+ M
Sbjct: 68 IFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTM 127
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 128 NGQWLGSRAIRTNWA 142
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella
moellendorffii]
Length = 135
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
AV + +VGGL+ + L AF P+G + + K LD+ T++ R FGFVTF ++
Sbjct: 4 AVDEFRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQ 63
Query: 65 QAMDNMDGAELYGRVLTVNYALPE 88
A+D M G +L GR +TV+ A P+
Sbjct: 64 DAIDGMHGKDLDGRSITVSKAQPK 87
>gi|158333760|ref|YP_001514932.1| RNA-binding domain-containing protein [Acaryochloris marina
MBIC11017]
gi|359463897|ref|ZP_09252460.1| RNA-binding region [Acaryochloris sp. CCMEE 5410]
gi|158304001|gb|ABW25618.1| RNA-binding region [Acaryochloris marina MBIC11017]
Length = 95
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L+ F +G +K K P D+ T + R FGFV + + +A++
Sbjct: 2 SIYVGNLSYDVTEQDLNTVFAEYGTVKSAKLPTDRETGRVRGFGFVEMSDDAEETKAIEE 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRTLKVNKAKP 79
>gi|384494999|gb|EIE85490.1| hypothetical protein RO3G_10200 [Rhizopus delemar RA 99-880]
Length = 246
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 50/83 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q+ T+Y+G L E E+++ + G + +V P D+ TQ H+++GFV FL +EDA A
Sbjct: 9 QEATVYIGNLDERCTESLIWELMLQAGPVVNVHLPKDRVTQTHQNYGFVEFLTEEDADYA 68
Query: 67 MDNMDGAELYGRVLTVNYALPER 89
M M+ LYG+ + VN A +R
Sbjct: 69 MKIMNQVRLYGKPVRVNKATSDR 91
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLEKEDAIQA 66
TL++G L EV+E IL+ F FG I V TP D T + FGF+++ E + A
Sbjct: 99 TLFIGNLDPEVDEKILYDTFSAFGLI--VNTPRISRDPDTGALKGFGFISYDNFESSDAA 156
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQG 96
++ MDG L + +TV+YA + KG G
Sbjct: 157 IEAMDGQYLMNKQITVSYAFKKDGKGERHG 186
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
+TL++G L+ + +E + AF G + +V+ P DQ T + FG+VTF +DA A +
Sbjct: 400 DTLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSIDDAKTAFE 459
Query: 69 NMDGAELYGRVLTVNYALPE 88
M GAE+ GR + ++YA P+
Sbjct: 460 AMTGAEIAGRPVRLDYATPK 479
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L+ V++ L F FG+I + D+ + + + FG+V F A A+
Sbjct: 298 LFVGNLSWNVDDEWLMREFEEFGEISGARVISDRESGRSKGFGYVEFTSSASAAAALKAK 357
Query: 71 DGAELYGRVLTVNYALP 87
G+ + GR V+++ P
Sbjct: 358 KGSLIDGREANVDFSTP 374
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 77
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 78 MNGKELDGRNITVNEA 93
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 77
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 78 MNGKELDGRNITVNEA 93
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 77
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 78 MNGKELDGRNITVNEA 93
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 165 NWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGSVSEARVMWDMKTGRSRG 224
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F E++DA +A+ +MDG L R + N+A
Sbjct: 225 YGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWA 258
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ--ATQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E +L F G +++VK D+ K ++GFV + + A +
Sbjct: 88 KRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGASKGFNYGFVEYDDPGAAER 147
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 148 AMQTLNGRRVHQAEIRVNWAY 168
>gi|218193515|gb|EEC75942.1| hypothetical protein OsI_13038 [Oryza sativa Indica Group]
Length = 261
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
++ ++VGGL+ +E L AF FG + D + L++ TQ+HR FGFVTF + E A
Sbjct: 5 EEGRIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSA 64
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ M EL GR ++VN A P+
Sbjct: 65 IKEMHCQELDGRTISVNKAEPK 86
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 4 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 62
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 63 MNGKELDGRNITVNEA 78
>gi|20257707|gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-SXEDAMRSAIEG 77
Query: 70 MDGAELYGRVLTVNYA 85
M+G EL GR +TVN A
Sbjct: 78 MNGKELDGRNITVNEA 93
>gi|1002380|gb|AAC47514.1| RRM-type RNA binding protein [Caenorhabditis elegans]
Length = 398
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E+IL + G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 21 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 80
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 81 IKILNMIKLYGKPIKVNKA 99
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L+ F FG I V K D + + F F+ F E
Sbjct: 105 NMDVGAN-IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFE 163
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA KG G AA+ + A + F + + +
Sbjct: 164 ASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQ 219
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ L AF PFGDI D + D T K + +GFV+F++K DA A+ M
Sbjct: 103 IFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTM 162
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 163 NGQWLGSRAIRTNWA 177
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
Q TLYVG L V E +L A F G +K K + + + FV F + + A
Sbjct: 10 CQPRTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPG---NDPYCFVEFSDHQSAAS 66
Query: 66 AMDNMDGAELYGRVLTVNYA 85
A+ M+ +G+ + VN+A
Sbjct: 67 ALLAMNKRLCFGKEMKVNWA 86
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GGLA ++ L AF FG++ + + D+ T + R FGFV++ E A
Sbjct: 32 CMSSSKLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESAS 91
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A+ MDG EL GR + V YA +R
Sbjct: 92 EALSAMDGQELGGRNIRVGYATDKR 116
>gi|20257697|gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGM 72
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 73 NGKELDGRNITVNEA 87
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ LH AF +GDI + K D+ T + R FGFVTF +++ A++ M
Sbjct: 10 CFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G L GR +TVN A
Sbjct: 70 NGQNLDGRNITVNEA 84
>gi|302791061|ref|XP_002977297.1| hypothetical protein SELMODRAFT_107195 [Selaginella
moellendorffii]
gi|300154667|gb|EFJ21301.1| hypothetical protein SELMODRAFT_107195 [Selaginella
moellendorffii]
Length = 180
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++GGL+ + L AF P+G I + K D+ T + R FGFVTF ++E A+ M
Sbjct: 7 CFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRKM 66
Query: 71 DGAELYGRVLTVNYALPER 89
EL GR +TV+ A P R
Sbjct: 67 HNQELEGRSITVSKAEPPR 85
>gi|172036857|ref|YP_001803358.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|354554661|ref|ZP_08973965.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|171698311|gb|ACB51292.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|353553470|gb|EHC22862.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 81
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L EV EA L+ F +G +K V P D+ T + R F FV +K + A++
Sbjct: 2 SIYVGNLPYEVTEADLNFVFSDYGSVKRVHVPTDRDTGRPRGFAFVELEQKANETNAIET 61
Query: 70 MDGAELYGRVLTVNYALPER 89
+DGAE GR + V+ A P R
Sbjct: 62 LDGAEWMGRTMKVDEARPRR 81
>gi|115532084|ref|NP_001021932.1| Protein SAP-49 [Caenorhabditis elegans]
gi|55977846|sp|Q09442.2|SF3B4_CAEEL RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Spliceosome-associated protein 49
gi|50511896|emb|CAB60993.2| Protein SAP-49 [Caenorhabditis elegans]
Length = 388
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E+IL + G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 71 IKILNMIKLYGKPIKVNKA 89
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 2/116 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L+ F FG I V K D + + F F+ F E
Sbjct: 95 NMDVGAN-IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEE 117
+ A++ M+G L R +TV+YA KG G AA+ + A + F + + +
Sbjct: 154 ASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQ 209
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF+PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 162 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 221
Query: 71 DGAELYGRVLTVN 83
+GA L GR + V
Sbjct: 222 NGAMLGGRNIKVG 234
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+ + ++ E + + F FG I K A H+ +GF+ + + AI+A+
Sbjct: 257 NRIYIASIHPDLTEEDIKSVFEAFGPIMTCKMSQGNAVHTHKGYGFIEYQTNQSAIEAIA 316
Query: 69 NMDGAELYGRVLTVNYAL 86
+M+ +L G++L V ++
Sbjct: 317 SMNLFDLGGQLLRVGRSI 334
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF+PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 175 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 234
Query: 71 DGAELYGRVLTV 82
+GA L GR + V
Sbjct: 235 NGAMLGGRNIKV 246
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 40/78 (51%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+ + ++ E + + F FG I K + H+ + F+ + + AI+A+
Sbjct: 270 NRIYIASIHPDLTEEDIKSVFEAFGAIATCKMSQGSSAHSHKGYAFIEYQTNQSAIEAIA 329
Query: 69 NMDGAELYGRVLTVNYAL 86
+M+ +L G++L V ++
Sbjct: 330 SMNLFDLGGQLLRVGRSI 347
>gi|434406111|ref|YP_007148996.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
gi|428260366|gb|AFZ26316.1| RRM domain-containing RNA-binding protein [Cylindrospermum
stagnale PCC 7417]
Length = 94
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L+ + EA L + F +G++K V P D+ T + R F FV +E +A+
Sbjct: 2 TIYVGNLSYQATEADLKSVFADYGEVKRVVLPTDRETGRLRGFAFVDMMEDSQEDKAITE 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRQLRVNKAKP 79
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E++ + AAF PFG I D + D AT K + +GF++F+ K DA A+ M
Sbjct: 99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVRDLATGKSKGYGFISFINKWDAESAIQQM 158
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + N+A
Sbjct: 159 NGQWLGGRQIRTNWA 173
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K LD T + + FV F E A A
Sbjct: 7 QPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILD--TTGNDPYCFVEFYENRHAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 65 LAAMNGRKILGKDMKVNWA 83
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+A +++ ++ F PFG I +++ + + FV F E A A+ +
Sbjct: 207 TVYCGGIASGLSDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFDSHEGAAHAIVS 260
Query: 70 MDGAELYGRVLTVNYA 85
++G + G + +
Sbjct: 261 VNGTCIEGHTVKCYWG 276
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF PFG+I + K D+ T + R FGFVTF +++ A+D M
Sbjct: 11 CFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDAM 70
Query: 71 DGAELYGRVLTVNYA 85
+G L GR +TVN A
Sbjct: 71 NGKVLDGRNITVNPA 85
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF FG+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL EV IL+ F FG + D + + K + +GFVTF+ KEDA AM M
Sbjct: 127 LFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQMM 186
Query: 71 DGAELYGRVLTVNYA 85
+G ++ GR + VN+
Sbjct: 187 NGEKIQGRTVKVNWG 201
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+++V GL E V+E +L F G + K D+ T H +GF+ F++ A A +N
Sbjct: 40 SVHVAGLHESVDETLLSRIFSIVGHVVSCKIMKDK-TGTHARYGFIEFIDHTTAEFAKEN 98
Query: 70 MDGAELYGRVLTVNYA 85
M+G +YG+ L VN+
Sbjct: 99 MNGRLVYGKELKVNWT 114
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YVGG+ +E E+ + F FG+I D+K T +++GFV F+ ++A +A+
Sbjct: 227 NNVYVGGIPKETEESTMRKLFGDFGEIIDLKI---MRTDAEKAYGFVRFVSHDNATKAIM 283
Query: 69 NMDGAELYGRVLTV 82
++G +L G L
Sbjct: 284 MLNGYQLNGGCLNC 297
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ V++ L AF +GD+ + + D+ T + R FGFV F +E A A+ +M
Sbjct: 38 LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL-SM 96
Query: 71 DGAELYGRVLTVNYA 85
DG +L GR + V+YA
Sbjct: 97 DGQDLNGRNIRVSYA 111
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N+ L F FGD+ D K D+ + + R FGFVTF +++ A++ M
Sbjct: 8 CFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEM 67
Query: 71 DGAELYGRVLTVNYA 85
+G EL GRV+TVN A
Sbjct: 68 NGKELDGRVITVNEA 82
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA +A L F FG++ D K D+ T + R FGFVTF +++ A+D M
Sbjct: 8 CFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEM 67
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 68 NGKELDGRTITVNEA 82
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA N+ L F FGD+ D K D+ + + R FGFVTF +++ A++ M
Sbjct: 8 CFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEM 67
Query: 71 DGAELYGRVLTVNYA 85
+G EL GRV+TVN A
Sbjct: 68 NGKELDGRVITVNEA 82
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + EA++ A F PFG + V+ D T + + +GFV F E E A +AM+ M
Sbjct: 217 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 276
Query: 71 DGAELYGRVLTV 82
+G EL GR L +
Sbjct: 277 NGFELAGRPLKI 288
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E++ L AAF PFG I D + D T K R +GFV+F+ K DA A+ M
Sbjct: 204 VFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAM 263
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 264 SGQWLGGRAIRTNWA 278
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V E ++ F G K K + A + FV F + A A+
Sbjct: 115 TLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGND--PYCFVEFYDHNHASAALTA 172
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ + + VN+A
Sbjct: 173 MNGRKIMHKEVKVNWA 188
>gi|391337396|ref|XP_003743055.1| PREDICTED: uncharacterized protein LOC100908642 [Metaseiulus
occidentalis]
Length = 543
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V++ +L F+ G I V P D+ T H+ +GFV FL +EDA A
Sbjct: 11 QDATIYVGGLDEKVSDNLLWELFVQAGPIVSVHMPKDRITGLHQGYGFVEFLGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKVMNMIKLYGKPVRVNKA 89
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F FV F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPETGNSKGFAFVNFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
E + A+D M+G L R ++++YA + KG G AA+ + A
Sbjct: 152 FEASDAAIDAMNGQYLCNRAISISYAFKKDSKGERHGSAAERLLA 196
>gi|302780311|ref|XP_002971930.1| hypothetical protein SELMODRAFT_172546 [Selaginella
moellendorffii]
gi|300160229|gb|EFJ26847.1| hypothetical protein SELMODRAFT_172546 [Selaginella
moellendorffii]
Length = 173
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++GGL+ + L AF P+G I + K D+ T + R FGFVTF ++E A+ M
Sbjct: 7 CFIGGLSWSTTDRSLETAFRPYGSIIEAKVVFDRETNRSRGFGFVTFEDEESMENAIRKM 66
Query: 71 DGAELYGRVLTVNYALPER 89
EL GR +TV+ A P R
Sbjct: 67 HNQELEGRSITVSKAEPPR 85
>gi|429329487|gb|AFZ81246.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 212
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V +L + L + I+ F FG I+DV PLD T++ R FGFV + EKED ++
Sbjct: 4 VTGYSLLIRNLRYSTSPQIVKETFERFGRIRDVYLPLDYNTRRPRGFGFVEYYEKEDVLE 63
Query: 66 AMDNMDGAELYGRVLTV 82
A+ MD A+L G V+T
Sbjct: 64 AVKAMDNADLDGSVITC 80
>gi|159164088|pdb|2DGO|A Chain A, Solution Structure Of The Rna Binding Domain In
Cytotoxic Granule-Associated Rna Binding Protein 1
gi|211938969|pdb|2RNE|A Chain A, Solution Structure Of The Second Rna Recognition Motif
(Rrm) Of Tia-1
Length = 115
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 18 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 77
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 78 GGQWLGGRQIRTNWA 92
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I D+ D T + +GF+TF + E A +A++ +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQL 311
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V +A ER GG
Sbjct: 312 NGFELAGRPMRVGHAT-ERPDGG 333
>gi|341882220|gb|EGT38155.1| hypothetical protein CAEBREN_32522 [Caenorhabditis brenneri]
gi|341882722|gb|EGT38657.1| hypothetical protein CAEBREN_06124 [Caenorhabditis brenneri]
Length = 388
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V+E+IL + G + V P D+ T H+ FGFV F+ +EDA A
Sbjct: 11 QDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ ++ +LYG+ + VN A
Sbjct: 71 IKILNMIKLYGKPIKVNKA 89
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQKHRSFGFVTFLEKE 61
N+ V N ++VG L EV+E +L+ F FG I V K D + + F F+ F E
Sbjct: 95 NMDVGAN-IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFE 153
Query: 62 DAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQ 120
+ A++ M+G L R +TV+YA KG G AA+ + A + F + + ++
Sbjct: 154 ASDTALEAMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQQFS 212
>gi|428210291|ref|YP_007094644.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428012212|gb|AFY90775.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 101
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 47/87 (54%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV L AAF +G +K V+ P D+ T + R F FV + A+D
Sbjct: 2 SIYVGNLSYEVTPEDLSAAFAQYGSVKRVQLPTDRETGRVRGFAFVEMDTDAEETTAIDA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
+DGAE GR + VN A P +G G
Sbjct: 62 LDGAEWMGRNMKVNKAKPREDRGSSDG 88
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I D+ D T + +GF+TF + E A +A++ +
Sbjct: 234 LYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQL 293
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V +A ER GG
Sbjct: 294 NGFELAGRPMRVGHAT-ERPDGG 315
>gi|344298615|ref|XP_003420987.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Loxodonta
africana]
Length = 450
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I D+ D T + +GF+TF + E A +A++ +
Sbjct: 268 LYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQL 327
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V +A ER GG
Sbjct: 328 NGFELAGRPMRVGHAT-ERPDGG 349
>gi|302421316|ref|XP_003008488.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
gi|261351634|gb|EEY14062.1| splicing factor 3B subunit 4 [Verticillium albo-atrum VaMs.102]
Length = 295
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E +++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 67 TVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPSDAEYAANV 126
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 127 MNGVKLYGKSLRVNKASADKQKQAEVG 153
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V+E IL+ F FG + + + + + FGF++F + E + A++N+
Sbjct: 156 LFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAVENL 215
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G L + ++V YA + KG G AA+
Sbjct: 216 HGQYLLSKEVSVQYAFKKDGKGERHGDAAE 245
>gi|197632397|gb|ACH70922.1| elongation factor-1 delta-1 [Salmo salar]
Length = 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL + +E L AF +G+I V D+ TQ+ R FGFVTF EDA AM M
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G + GR++ V+ A
Sbjct: 67 NGKSVDGRMIRVDEA 81
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E++ + AAF PFG I D + D AT K + +GF++F+ K DA A+ M
Sbjct: 99 VFVGDLSPEISTDDVRAAFAPFGKISDARVVKDLATGKSKGYGFISFINKWDAESAIQQM 158
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + N+A
Sbjct: 159 NGQWLGGRQIRTNWA 173
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K LD T + + FV F E A A
Sbjct: 7 QPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILD--TTGNDPYCFVEFYENRHAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 65 LAAMNGRKILGKDMKVNWA 83
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+A +++ ++ F PFG I +++ + + FV F E A A+ +
Sbjct: 207 TVYCGGIASGLSDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFDSHEGAAHAIVS 260
Query: 70 MDGAELYGRVLTVNYA 85
++G + G + +
Sbjct: 261 VNGTCIEGHTVKCYWG 276
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +GD+ D K D+ T + R FGFVTF E QA++ M
Sbjct: 8 CFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 67
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 68 NGQDLDGRNITVNEA 82
>gi|321262344|ref|XP_003195891.1| hypothetical protein CGB_H5040W [Cryptococcus gattii WM276]
gi|317462365|gb|ADV24104.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 401
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVGGL E+ E L F +G+I DV D+ T K R FGF+ + ++ + A+DNM
Sbjct: 33 IYVGGLPFELTEGDLITIFSQWGEIMDVNLVRDKETGKSRGFGFLMYEDQRSTVLAVDNM 92
Query: 71 DGAELYGRVLTVNYALPERIKG 92
+G ++ GR L V++ R +G
Sbjct: 93 NGTQVMGRTLKVDHTRNYRQQG 114
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella
moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella
moellendorffii]
Length = 145
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ + L AF P+G + + K LD+ T++ R FGFVTF ++ A+D M
Sbjct: 4 CFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAIDGM 63
Query: 71 DGAELYGRVLTVNYALPE 88
G +L GR +TV+ A P+
Sbjct: 64 HGKDLDGRSITVSKAQPK 81
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
Query: 1 MANLAVQKNT-----LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFV 55
MAN +QK T LYVG L + E +L F PFG I ++ D T + + +GF+
Sbjct: 250 MAN-NLQKGTGGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFI 308
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGG 93
TF + E A +AMD ++G EL GR + V + + E++ GG
Sbjct: 309 TFSDSECARRAMDQLNGFELAGRPMRVGH-VTEQLDGG 345
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +GD+ D K D+ T + R FGFVTF E QA++ M
Sbjct: 8 CFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 67
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 68 NGQDLDGRNITVNEA 82
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L + F PFG I+ ++ +D T + + +GF+TF EDA +AM+ +
Sbjct: 112 LYVGSLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKAMEQL 171
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + +N+
Sbjct: 172 NGFELAGRPMKINHV 186
>gi|190344642|gb|EDK36359.2| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVG L +VNEA+L+ I F I+ + P D+ + H+ +GFV F EDA +
Sbjct: 16 KATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVSGTHQGYGFVEFRGIEDANYVL 75
Query: 68 DNMDGAELYGRVLTVNYALP 87
+ + G LYG+ L + A P
Sbjct: 76 EILRGVRLYGKSLKLRRADP 95
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLEKEDAIQAM 67
L+VG L ++E LH F FG + V+ P+ D T + + GF+TF + + +
Sbjct: 123 LFVGNLDPLIDEQYLHETFSKFGTM--VRPPVVIRDSETGESKRHGFLTFGDFQTTDSVI 180
Query: 68 DNMDGAELYGRVLTVNYALPE--------RIKGGEQ 95
+ M+GA L ++++YA E RI+ G++
Sbjct: 181 EKMNGAVLMNASISIDYAFKEDPANSNQKRIRHGDK 216
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF+PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 188 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 247
Query: 71 DGAELYGRVLTV 82
+GA L GR + V
Sbjct: 248 NGAMLGGRNIKV 259
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +Y+ + ++ E + + F FG I K A H+ + F+ + + AI+A+
Sbjct: 283 NRIYIASIHPDLTEEDIKSVFEAFGPIVTCKMSQGSAAHTHKGYAFIEYQTNQSAIEAIA 342
Query: 69 NMDGAELYGRVLTVNYAL-PERIKGGEQGWAAQP 101
+M+ +L G++L V ++ P G +A P
Sbjct: 343 SMNLFDLGGQLLRVGRSITPPNALMGPAANSAMP 376
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 32 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 91
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 92 GGQWLGGRQIRTNWA 106
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL ++ L AF +GD+ D K D+ T + R FGFVTF E QA++ M
Sbjct: 8 CFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAM 67
Query: 71 DGAELYGRVLTVNYALPER 89
+G +L GR +TVN A R
Sbjct: 68 NGQDLDGRNITVNEAQSRR 86
>gi|195035923|ref|XP_001989421.1| GH10062 [Drosophila grimshawi]
gi|193905421|gb|EDW04288.1| GH10062 [Drosophila grimshawi]
Length = 251
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TL+ L E V+E IL+ F+ G I++V+ PLD A ++ R+FGFVT+ K A
Sbjct: 74 QIRTLFCNNLDERVSEEILYEVFLQAGPIENVRIPLDNAGRQ-RNFGFVTYQHKSAVPYA 132
Query: 67 MDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADT 108
+D G EL+ + LT+ E+ K +QG + P D T
Sbjct: 133 VDLYQGLELFQKKLTIRQQCVEKPK-HQQGRSRNPFSQDFAT 173
>gi|428203936|ref|YP_007082525.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981368|gb|AFY78968.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 97
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+++VG L+ EV +A L++ F +G +K V P D+ T + R F FV + A++
Sbjct: 2 SIFVGNLSYEVTQADLNSVFAEYGSVKRVHIPTDRETGRMRGFAFVEMETAAEETSAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
+DGAE YGR + VN A P R G+ G
Sbjct: 62 LDGAEWYGREMKVNQAKP-RENNGDNG 87
>gi|83771650|dbj|BAE61780.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871241|gb|EIT80403.1| splicing factor 3b, subunit 4 [Aspergillus oryzae 3.042]
Length = 139
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+VG LA + L +AF FGD+ D D+ T + R FGF+TF E+ A A++
Sbjct: 32 NKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIE 91
Query: 69 NMDGAELYGRVLTVNYA 85
++G EL GR + VNYA
Sbjct: 92 ALNGQELDGREIRVNYA 108
>gi|427416267|ref|ZP_18906450.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
gi|425758980|gb|EKU99832.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
7375]
Length = 89
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV EA L A F +G ++ + P D+ T + R FGFV+ + + +A++
Sbjct: 2 SIYVGNLSYEVIEAELTAVFAKYGTVRSIYLPTDRDTGRLRGFGFVSMGAESEETEAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGG 93
++G E GR L VN A +I+GG
Sbjct: 62 LNGTEWMGRELKVNKAKTPQIRGG 85
>gi|354556704|ref|ZP_08975994.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|353551316|gb|EHC20722.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 94
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L F +G +K V+ P D+ T K R FGFV + + A++
Sbjct: 2 SIYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRALKVNKARP 79
>gi|15237666|ref|NP_196048.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|20260152|gb|AAM12974.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|21387121|gb|AAM47964.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332003340|gb|AED90723.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 310
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A + + ++VGGL+ EV + L AF FGDI D + L++ T + R FGF+TF ++
Sbjct: 3 AKEGSRIFVGGLSPEVTDRDLERAFSRFGDILDCQIMLERDTGRSRGFGFITFADRRAMD 62
Query: 65 QAMDNMDGAELYGRVLTVNYALPE 88
+++ M G + RV++VN A P+
Sbjct: 63 ESIREMHGRDFGDRVISVNRAEPK 86
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L++GG++ ++ L AF +G++ + + +D+ T + R FGFVT+ ++A
Sbjct: 27 CMSSSKLFIGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTSTDEAA 86
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ MDG +L GR++ V+YA
Sbjct: 87 AAITGMDGKDLQGRIVRVSYA 107
>gi|20257693|gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF + A++ M
Sbjct: 17 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEGM 76
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 77 NGKELDGRNITVNEA 91
>gi|428304645|ref|YP_007141470.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246180|gb|AFZ11960.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 103
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V + L AF +G +K V+ P D+ T + R FGFV + A+D
Sbjct: 2 SVYVGNLSFDVTQDDLSQAFAEYGTVKSVQLPTDRETGRMRGFGFVEMSSDAEETAAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|388582029|gb|EIM22335.1| hypothetical protein WALSEDRAFT_56985 [Wallemia sebi CBS 633.66]
Length = 218
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+GGL + E + FG+I D+ P D+AT K R F FV + ++ + A+DN+
Sbjct: 34 VYIGGLVTGLTEGDVITILSQFGEIADINMPKDKATGKSRGFAFVMYEDQRSTVLAVDNL 93
Query: 71 DGAELYGRVLTVNYA 85
+G+ + GR L V++
Sbjct: 94 NGSTVLGRTLRVDHV 108
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF FG+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|196007894|ref|XP_002113813.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
gi|190584217|gb|EDV24287.1| hypothetical protein TRIADDRAFT_26280 [Trichoplax adhaerens]
Length = 291
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVG L E+V+E +L F+ G + +V P D+ TQ H+ +GF+ FL ++DA A
Sbjct: 11 QDATIYVGNLDEKVSETLLWELFLQAGPVVNVHMPKDRITQAHQGYGFIEFLGEDDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E L+ F FG I ++TP D T + + F F+ F
Sbjct: 95 NLDVGAN-VFIGNLDPEVDEKQLYDTFSAFGVI--LQTPKIMRDPETGQSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + AM+ M+G L R + V+YA + KG G AA+ + A
Sbjct: 152 FDASDAAMEAMNGQFLCNRTINVSYAFKKDSKGERHGSAAERLLA 196
>gi|346974668|gb|EGY18120.1| splicing factor 3B subunit 4 [Verticillium dahliae VdLs.17]
Length = 498
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E +++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPGDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 74 MNGVKLYGKSLRVNKASADKQKQAEVG 100
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V+E IL+ F FG + + + + + FGF++F + E + A++N+
Sbjct: 103 LFVGNLDPMVDEKILYDTFSRFGPLLTLPKVAREDSGNSKGFGFISFADFESSDAAVENL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G L + ++V YA + KG G AA+
Sbjct: 163 HGQYLLSKEVSVQYAFKKDGKGERHGDAAE 192
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ ++A L AF FG++ D K +D+ T + R FGFV F ++
Sbjct: 28 LGSLRLMSTKLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDE 87
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG +L GR + VN A
Sbjct: 88 TAASAAISEMDGKDLNGRNIRVNPA 112
>gi|353242335|emb|CCA73988.1| related to RNA-binding proteins [Piriformospora indica DSM 11827]
Length = 274
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 5/98 (5%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+++GGL E+ E + F +G++ D+ P +++T K R F F+ + ++ + A+DN+
Sbjct: 34 IFIGGLNYELTEGDVITVFSQYGEVVDIDMPREKSTGKRRGFAFLMYEDQRSTVLAVDNL 93
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADT 108
+GAEL GR L V++ ++ +Q W D +T
Sbjct: 94 NGAELAGRTLRVDH-----VQNYKQKELVDGKWVDRET 126
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ D T + R +GF+TF EDA +AM+ +
Sbjct: 329 LYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQL 388
Query: 71 DGAELYGRVLTVNY 84
+G EL GR + V +
Sbjct: 389 NGFELAGRPMKVGH 402
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 158 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 217
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 218 GGQWLGGRQIRTNWA 232
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 309 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 362
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 363 VNGTTIEGHVVKCYWG 378
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 169 NWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRG 228
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 229 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 262
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL + +E L AF +G+I V D+ TQ+ R FGFVTF EDA AM M
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAM 66
Query: 71 DGAELYGRVLTVN 83
+G + GR++ V+
Sbjct: 67 NGKSVDGRMIRVD 79
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V + ++VGGL+ ++ L AF +G++ + + +D T + + FGFVTF KE+A
Sbjct: 67 VSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEASS 126
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
A+ +DG +L GR + NYA+
Sbjct: 127 AIKALDGKDLGGRRIRCNYAV 147
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 146 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 205
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 206 GGQWLGGRQIRTNWA 220
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 46 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 103
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 104 MNGRKIMGKEVKVNWA 119
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 294 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 347
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 348 VNGTTIEGHVVKCYWG 363
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+ G L+ V++ L+ AF FG+I + D+ T + R FG+V F + E A +A +
Sbjct: 204 TLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEA 263
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAA-------QPIWADADTWF 110
M G E+ GR L ++YA + +G Q AA + A++DT F
Sbjct: 264 MQGQEIDGRALNLDYANAKPTEGKPQDRAADRAKRHGDTLSAESDTLF 311
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
L+ + +TL+VG L + + + F ++ V+ P D + + FG+VTF EDA
Sbjct: 303 LSAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRLPTDPDSGNLKGFGYVTFNSIEDA 362
Query: 64 IQAMDNMDGAEL 75
A+D +GA +
Sbjct: 363 KSALDAKNGASI 374
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 75 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 134
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 135 GGQWLGGRQIRTNWA 149
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 182 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 235
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 236 VNGTTIEGHVVKCYWG 251
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 162 NWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRG 221
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F E++DA +A+ +MDG L R + N+A
Sbjct: 222 YGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWA 255
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL V E +L F G +++VK D+ + K ++GFV + + A +AM
Sbjct: 88 KRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNS-KGFNYGFVEYDDPAAAERAM 146
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 147 QTLNGRRVHQAEIRVNWAY 165
>gi|20257701|gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEGM 78
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 79 NGKELDGRNITVNEA 93
>gi|209737234|gb|ACI69486.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 146
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL + +E L AF +G+I V D+ TQ+ R FGFVTF EDA AM M
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G + GR++ V+ A
Sbjct: 67 NGKSVDGRMIRVDEA 81
>gi|225156280|ref|ZP_03724758.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
gi|224803012|gb|EEG21257.1| RNP-1 like RNA-binding protein [Diplosphaera colitermitum TAV2]
Length = 106
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L+ +EA L AF G + DV D+ T + R F FVTF E++ A + +
Sbjct: 5 LYVGNLSFNTSEADLRTAFSTCGTLTDVFLATDRETGRPRGFAFVTFDTAEESQLATEKL 64
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G +L GR +TVN A P+ GG
Sbjct: 65 NGTDLGGRAITVNEARPKEATGG 87
>gi|20257681|gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 13 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 72
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 73 NGKELDGRNITVNEA 87
>gi|115454617|ref|NP_001050909.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|31712074|gb|AAP68379.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|108710427|gb|ABF98222.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113549380|dbj|BAF12823.1| Os03g0681900 [Oryza sativa Japonica Group]
gi|215692670|dbj|BAG88090.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215692827|dbj|BAG88216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625569|gb|EEE59701.1| hypothetical protein OsJ_12125 [Oryza sativa Japonica Group]
Length = 308
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
++ ++VGGL+ +E L AF FG + D + L++ TQ+HR FGFVTF + E A
Sbjct: 5 EEGRIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSA 64
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ M EL GR ++VN A P+
Sbjct: 65 IKEMHCQELDGRTISVNKAEPK 86
>gi|342879058|gb|EGU80333.1| hypothetical protein FOXB_09130 [Fusarium oxysporum Fo5176]
Length = 375
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 32 TVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAANV 91
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ + E G
Sbjct: 92 MNGIKLYGKSLRVNKASADKQRAAEVG 118
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E IL+ F FG + + + + + FGFV+F + E + A+ N+
Sbjct: 121 LFIGNLDPMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAIANL 180
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G + + ++V YA + KG G
Sbjct: 181 HGQYILSKEVSVQYAFKKDGKGERHG 206
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K ++ T + + FV F + A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIME--TAGNDPYCFVEFHDDRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G + G+ + VN+A
Sbjct: 66 MNGRKKMGKEVKVNWA 81
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + D + D + K R +GF+ F +K DA QA+ M
Sbjct: 107 VFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 166
Query: 71 DGAELYGRVLTVNYA 85
+G L R + VN+A
Sbjct: 167 NGEWLGSRAIRVNWA 181
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKH-RSFGFVTFLEKEDA 63
A ++ LYVG L+ V E +L F G ++ VK D+ Q ++GFV +++ A
Sbjct: 10 APRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAA 69
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
A+ ++G +++ + VN+A
Sbjct: 70 ETALQTLNGRKIFDTEIRVNWA 91
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K T+YVG L+ NE L A F +G+I V+ P + Q + FGFV F +EDA +A
Sbjct: 25 KCTVYVGSLSWSTNEDGLKAVFEKYGNITSVRIPRNDRDQ-SKGFGFVEFENEEDAKKAC 83
Query: 68 DNMDGAELYGRVLTVNYALPE 88
+ MDG EL GR L VN + P+
Sbjct: 84 E-MDGTELEGRALKVNISQPK 103
>gi|449281849|gb|EMC88820.1| Splicing factor 3B subunit 4, partial [Columba livia]
Length = 177
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A+
Sbjct: 3 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 62
Query: 70 MDGAELYGRVLTVNYA 85
M+ +LYG+ + VN A
Sbjct: 63 MNMIKLYGKPIRVNKA 78
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 84 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 140
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
+ + A++ M+G L R +TV+YA + KG G
Sbjct: 141 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHG 177
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF PFG++ K D+ T + R FGFVTF ++ A+ M
Sbjct: 9 CFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKEM 68
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 69 NGQELDGRNITVNQA 83
>gi|428207498|ref|YP_007091851.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
gi|428009419|gb|AFY87982.1| RNP-1 like RNA-binding protein [Chroococcidiopsis thermalis PCC
7203]
Length = 98
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L AAF +G +K V+ P D+ T + R F FV + A+D
Sbjct: 2 SIYVGNLSYEVTQEDLSAAFAEYGSVKRVQLPTDRETGRMRGFAFVEMDTDTEETAAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRNLKVNKAKP 79
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ ++ L AF FG++ D K D+ T + R FGFVTF ++ A+D M
Sbjct: 8 CFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDEM 67
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 68 NGKELDGRSITVNEA 82
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + L+VGGL+ +E L AF +G+I D K +D+ T + R FGF+T+ +E A
Sbjct: 27 CMSSSKLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQAS 86
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKG 92
A+ +DG +L+GR L V+ A ER G
Sbjct: 87 SAIMALDGKDLHGRNLRVSAAT-ERTSG 113
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +GD+ D K D+ T + R FGFVTF +++ A++ M
Sbjct: 10 CFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGQELDGRSITVNEA 84
>gi|443654715|ref|ZP_21131411.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
gi|159026915|emb|CAO89166.1| rbpF/A2 [Microcystis aeruginosa PCC 7806]
gi|443333703|gb|ELS48246.1| RNA recognition motiffamily protein [Microcystis aeruginosa
DIANCHI905]
Length = 100
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L EV L F +G + V P+D+ T K R FGFV E+ +A++
Sbjct: 2 TIYVGNLVYEVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIET 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR + VN A P+
Sbjct: 62 LDGAEWMGRQMKVNKARPK 80
>gi|46125929|ref|XP_387518.1| hypothetical protein FG07342.1 [Gibberella zeae PH-1]
Length = 357
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ + E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQRAAEVG 100
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E IL+ F FG + + + + + FGFV+F + E + A+D +
Sbjct: 103 LFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAIDTL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G + + ++V YA + KG G
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGERHG 188
>gi|17230420|ref|NP_486968.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75907197|ref|YP_321493.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|81818505|sp|Q44554.3|RBPB_NOSS1 RecName: Full=Putative RNA-binding protein RbpB
gi|304057|gb|AAA67898.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|801736|dbj|BAA09050.1| RNA-binding protein RbpB [Anabaena variabilis]
gi|17132022|dbj|BAB74627.1| RNA-binding protein [Nostoc sp. PCC 7120]
gi|75700922|gb|ABA20598.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L+A F +G +K V+ P+D+ T + R FGFV + A++
Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
+ ++VGGL+ V++ L +F FGD+ + K D+ T + R FGFVTF ++A
Sbjct: 36 CMSSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGFGFVTFASPDEANA 95
Query: 66 AMDNMDGAELYGRVLTVNYA 85
A++ MDG +L GR + VN A
Sbjct: 96 AVEAMDGKDLQGRSIRVNIA 115
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
++ + ++VGG++ ++ L AF +G + + K +D+ + + R FGFVTF E+A
Sbjct: 27 SMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRESGRSRGFGFVTFTSSEEAG 86
Query: 65 QAMDNMDGAELYGRVLTVNYA 85
A+ MDG +L GR++ V+YA
Sbjct: 87 AAITGMDGKDLQGRIVRVSYA 107
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K +D T H + FV F E A
Sbjct: 5 QPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATAT 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 63 IAAMNGRKILGKEVKVNWA 81
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E I+ F PFG I +++ + + FV F E A A+ +
Sbjct: 204 TVYCGGVTTGLTEQIMRQTFSPFGQIMEIR------VFPEKGYSFVRFNSHEAAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA--LPERIKGGEQ----------GWAAQPI--WADADTWFERQQQ 115
++G + G V+ + + ++G Q G+AAQP W W+ QQ
Sbjct: 258 VNGTSIEGYVVKCYWGKETTDMVQGPIQQVPMAQQSTLGFAAQPYNQWGQ---WYGNTQQ 314
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E++ L AF+PFG++ + K D AT K + +GFV++ +EDA +A++ M
Sbjct: 134 VFVGDLSAEIDSTKLREAFLPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQM 193
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 194 NGQWLGRRTIRTNWA 208
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L + + L F G + K D + F FV F + A QA+ +
Sbjct: 39 TLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQS 98
Query: 70 MDGAELYGRVLTVNYAL 86
M+G +L R + VN+A+
Sbjct: 99 MNGRQLLEREMRVNWAV 115
>gi|340522320|gb|EGR52553.1| predicted protein [Trichoderma reesei QM6a]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 9 TVYIGNIDERATPAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAANV 68
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 69 MNGIKLYGKSLRVNKASADKQKAAEVG 95
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E IL+ F FG + + + + + FGFV++ + E + A+ N+
Sbjct: 98 LFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAIANL 157
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G + + ++V YA + KG G A+
Sbjct: 158 HGQYILSKEVSVQYAFKKDGKGERHGDPAE 187
>gi|298492453|ref|YP_003722630.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
gi|298234371|gb|ADI65507.1| RNP-1 like RNA-binding protein ['Nostoc azollae' 0708]
Length = 102
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L A F +G ++ V+ P D+ T K R FGFV + + A++
Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGSVRRVQLPTDRETGKLRGFGFVEMGTEAEETTAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica
Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 70 NGKELDGRNITVNEA 84
>gi|212275991|ref|NP_001130195.1| uncharacterized protein LOC100191289 [Zea mays]
gi|194688516|gb|ACF78342.1| unknown [Zea mays]
Length = 311
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
++ ++VGGL+ + +E L AF FG + DV+ L++ T +HR FGFVTF ++ A
Sbjct: 5 EEGRIFVGGLSWQTDERKLQDAFGRFGKVVDVQIMLERHTYRHRGFGFVTFEDRRAVDSA 64
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ M G E GR ++VN A P+
Sbjct: 65 IKEMRGQESDGRTISVNKAEPK 86
>gi|218245224|ref|YP_002370595.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|257058256|ref|YP_003136144.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
gi|218165702|gb|ACK64439.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8801]
gi|256588422|gb|ACU99308.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 8802]
Length = 94
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG LA EV EA L++ F +G +K V P+D+ T + R F FV A+
Sbjct: 2 SIYVGNLAYEVTEADLNSVFGEYGSVKRVHVPMDRDTGRMRGFAFVEMESPSQEDSAIST 61
Query: 70 MDGAELYGRVLTVNYA 85
+DGAE GR L VN A
Sbjct: 62 LDGAEWMGRTLKVNKA 77
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 110 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 169
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 170 GGQWLGGRQIRTNWA 184
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 67
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 68 MNGRKIMGKEVKVNWA 83
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 217 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 270
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 271 VNGTTIEGHVVKCYWG 286
>gi|408396492|gb|EKJ75649.1| hypothetical protein FPSE_04150 [Fusarium pseudograminearum CS3096]
Length = 357
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPTDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ + E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQRAAEVG 100
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E IL+ F FG + + + + + FGFV+F + E + A+D +
Sbjct: 103 LFIGNLDSMVDEKILYDTFSRFGPLLSLPKVAREESGASKGFGFVSFADFESSDAAIDTL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G + + ++V YA + KG G
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGERHG 188
>gi|321479244|gb|EFX90200.1| hypothetical protein DAPPUDRAFT_40110 [Daphnia pulex]
Length = 268
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q T+YVGGL E+V E +L F+ G + +V P D+ T H+ +GF+ FL ++DA A
Sbjct: 11 QDATIYVGGLDEKVTEPLLWELFVQGGPVVNVHMPKDRITLLHQGYGFIEFLSEDDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
M+ +LYG+ + VN A
Sbjct: 71 CKIMNMIKLYGKPIRVNKA 89
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L EV+E +L+ F FG I ++TP D T + F F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEVDEKLLYDTFSAFGVI--LQTPKIMRDPTTGNSKGFAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +T++YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITISYAFKKDSKGERHGSAAERLLA 196
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + + + D T + R +GFV F E+ DA +A++ M
Sbjct: 183 IFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAM 242
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 243 DGEWLGSRAIRCNWA 257
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 159 GGQWLGGRQIRTNWA 173
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 206 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 259
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 260 VNGTTIEGHVVKCYWG 275
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M+
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 58
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 59 GRKIMGKEVKVNWA 72
>gi|22298986|ref|NP_682233.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
gi|22295168|dbj|BAC08995.1| RNA binding protein [Thermosynechococcus elongatus BP-1]
Length = 90
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLY+G L+ E E L F +G I+ + P+D+ T K R F FV ++ A+D+
Sbjct: 2 TLYIGNLSYEATENDLREVFEKYGAIRRIVLPVDRETGKRRGFAFVELADETQEAVAIDD 61
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
+DGA GRVL VN A P++ G
Sbjct: 62 LDGATWLGRVLKVNKAKPKQPGG 84
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L A F +G +K V+ P D+ T + R FGFV + + A+D
Sbjct: 2 SVYVGNLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRTLRVNKAKP 79
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+ A
Sbjct: 100 DGQELQGRNIRVSIA 114
>gi|254410328|ref|ZP_05024107.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
gi|196182534|gb|EDX77519.1| RNA-binding protein, putative [Coleofasciculus chthonoplastes PCC
7420]
Length = 95
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V L A F +G +K V+ P D+ T + R FGFV ++ A++
Sbjct: 2 SIYVGNLSYDVTAEDLSAVFADYGAVKRVQLPTDRETGRPRGFGFVEMETDDEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQ 95
+DGAE GR + VN A P +GG +
Sbjct: 62 LDGAEWMGRNMKVNKARPRENRGGNR 87
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF F I D + D T K R +GF++F EK DA QA+ M
Sbjct: 108 VFVGDLSPEVNDEILSKAFSGFKSISDARVMWDMNTGKSRGYGFLSFREKTDAEQAISTM 167
Query: 71 DGAELYGRVLTVNYA 85
+G L R + VN+A
Sbjct: 168 NGEWLGSRAIRVNWA 182
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKT-PLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
LYVG L+ V E +L F G ++ VK P + ++GFV + + A A+
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 70 MDGAELYGRVLTVNYA 85
++G +++ + VN+A
Sbjct: 77 LNGRKIFDTEIRVNWA 92
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K +D T H + FV F E A
Sbjct: 5 QPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATAT 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 63 IAAMNGRKILGKEVKVNWA 81
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E I+ F PFG I +++ + + + FV F E A A+ +
Sbjct: 204 TVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPE------KGYSFVRFNSHEAAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTSIEGYVVKCYWG 273
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I D K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 49/80 (61%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
NTL++G L+ NE + F FG ++ V+ P D+ T + FG+V+F + + A A+D
Sbjct: 304 NTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAKAAID 363
Query: 69 NMDGAELYGRVLTVNYALPE 88
G+EL GRV+ ++++ P+
Sbjct: 364 GAAGSELDGRVIRLDFSTPK 383
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ +++ L + F G +K + LD+ + + R FG+V F E A++AMD
Sbjct: 207 IFVGQLSWNIDDDWLKSEFEQLGPVKTARVQLDRQSGRSRGFGYVEFESHELAVKAMDQF 266
Query: 71 DGAELYGRVLTVNYALP 87
G E+ GR + V+ ++P
Sbjct: 267 AGKEIDGRPVRVDLSVP 283
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 159 GGQWLGGRQIRTNWA 173
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 206 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 259
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 260 VNGTTIEGHVVKCYWG 275
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M+
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 59 GRKIMGKEVKVNWA 72
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 122 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 181
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 182 GGQWLGGRQIRTNWA 196
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 229 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 282
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 283 VNGTTIEGHVVKCYWG 298
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M+
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 81
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 82 GRKIMGKEVKVNWA 95
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|122890334|emb|CAJ74077.1| RNA recognition motif 1 [Guillardia theta]
Length = 199
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ EV++ L AF FG+ + K +D+ + + R FGFVTF E+ A +A++ M
Sbjct: 90 LFVGGLSWEVDDQQLMEAFQEFGNC-EAKVMVDRYSGRSRGFGFVTFSEEHSAAKAIEEM 148
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TV +A
Sbjct: 149 NGRELLGRQITVTHA 163
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + F+ F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|354566485|ref|ZP_08985657.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
gi|353545501|gb|EHC14952.1| RNP-1 like RNA-binding protein [Fischerella sp. JSC-11]
Length = 99
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV E L+A F +G +K V+ P D+ T R FGFV + A++
Sbjct: 2 SVYVGNLSYEVTEDSLNAVFAEYGSVKRVQLPTDRETGHVRGFGFVEMSTDAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
+DGAE GR L VN A P+ +G
Sbjct: 62 LDGAEWMGRDLKVNKAKPKEDRG 84
>gi|116781810|gb|ABK22248.1| unknown [Picea sitchensis]
Length = 215
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGL+ ++ L AF FG + + K +D+ T + R FGFVTF +K+ A+D+M
Sbjct: 9 CFVGGLSWSTSDRTLEDAFHKFGHLIEAKVVVDRDTGRSRGFGFVTFDDKKSMEDAIDSM 68
Query: 71 DGAELYGRVLTVNYALPE 88
G L GR +TV+ A P+
Sbjct: 69 HGMSLDGRSITVDRARPK 86
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 97 VFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V E ++ F G K K +D T + + FV F + A +
Sbjct: 5 QPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAAS 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 63 LAAMNGRKIMGKEVKVNWA 81
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
M+ + T+Y GG++ + E ++ F FG I +V+ D + + FV F
Sbjct: 195 MSQSSPSNCTVYCGGVSSGLTEQLMRQTFSAFGQIMEVRVFPD------KGYSFVRFNSH 248
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 249 ESAAHAIVSVNGTSIDGHVVKCYWG 273
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ V++ L AF +GD+ + + D+ T + R FGF+ F +E A A+ +M
Sbjct: 13 LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSAL-SM 71
Query: 71 DGAELYGRVLTVNYA 85
DG +L GR + V+YA
Sbjct: 72 DGQDLNGRNIRVSYA 86
>gi|430811379|emb|CCJ31130.1| unnamed protein product [Pneumocystis jirovecii]
Length = 285
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q+ T+YVG L E +AIL F+ G + +V P D+ +Q H+ FGF FL EDA A
Sbjct: 11 QEATIYVGNLDERTTDAILWELFLQCGPVVNVHLPKDRVSQTHQGFGFCEFLTVEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
M+ +LYG+ + VN A
Sbjct: 71 CRIMNQIKLYGKPIRVNKA 89
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L VNE +L+ F FG + + + FGF++F E A A++ M
Sbjct: 103 LFVGNLDPLVNEKVLYDTFSVFGMLVAPPKIARDDNGQSKCFGFISFDSFEAADAAIEGM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+ L + ++V+YA + KG G
Sbjct: 163 NNQFLMNKSVSVSYAFKKDGKGERHG 188
>gi|304055|gb|AAA17426.1| RNA-binding protein [Anabaena sp.]
Length = 103
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L+A F +G +K V+ P D+ T + R FGFV + A++
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR L VN A P+
Sbjct: 62 LDGAEWMGRDLKVNKAKPK 80
>gi|17229579|ref|NP_486127.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75909339|ref|YP_323635.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
gi|17131178|dbj|BAB73786.1| RNA-binding protein RbpA2 [Nostoc sp. PCC 7120]
gi|75703064|gb|ABA22740.1| RNA-binding region RNP-1 [Anabaena variabilis ATCC 29413]
Length = 103
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L+A F +G +K V+ P D+ T + R FGFV + A++
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRMRGFGFVEMGSDAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR L VN A P+
Sbjct: 62 LDGAEWMGRDLKVNKAKPK 80
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E IL F G + VK D+ K ++GFV F + A +
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAY 170
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 166 NWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRG 225
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F E++DA +A+ +MDG L R + N+A
Sbjct: 226 YGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWA 259
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSF--GFVTFLEKED 62
K LYVGGL V E +L F G ++ VK D+ A Q+ + F GFV + +
Sbjct: 86 KRALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIPDKNVGAEQQAKGFNYGFVEYDDPGA 145
Query: 63 AIQAMDNMDGAELYGRVLTVNYAL 86
A +AM ++G ++ + VN+A
Sbjct: 146 AERAMQTLNGRRVHQAEIRVNWAY 169
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 167 GGQWLGGRQIRTNWA 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 16 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 75
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 76 MNGRKIMGKEVKVNWA 91
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 214 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVS 267
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 268 VNGTTIEGHVVKCYWG 283
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + F+ F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQILEIRVFPD------KGYSFIRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|302757806|ref|XP_002962326.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
gi|300169187|gb|EFJ35789.1| hypothetical protein SELMODRAFT_78193 [Selaginella moellendorffii]
Length = 89
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 15 GLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAE 74
GL+ + E I+ AF FG++++V+ D+ T K + +GF+T++ + DA A+ MDG
Sbjct: 1 GLSWGLTEGIVQEAFSSFGEVREVRIVKDRETGKSKGYGFITYVSEADAQDALQAMDGKN 60
Query: 75 LYGRVLTVNYA---LPERIKGGEQGWAAQ 100
L GR + VN+A +P R+ G G +
Sbjct: 61 LNGREIRVNFAARDIPSRMSPGFSGGVGR 89
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ-AMDN 69
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF EDA++ A++
Sbjct: 67 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTF-STEDAMRSAIEG 125
Query: 70 MDGAELYGRVLTVN 83
M+G EL GR +TVN
Sbjct: 126 MNGKELDGRNITVN 139
>gi|378464494|gb|AFC01196.1| eukaryotic translation initiation factor, partial [Ammopiptanthus
mongolicus]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++ V L+E+ E LH F PFG + V +DQ T R FGFV F+ K+DA +A+D
Sbjct: 66 NSVRVTNLSEDTREPDLHDLFRPFGAVSRVYVAIDQKTGISRGFGFVNFVNKDDAQRAID 125
Query: 69 NMDGAELYGRVLTVNYALP 87
++G +L V +A P
Sbjct: 126 KLNGYGYDNLILRVEWATP 144
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF PFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 94 NGQWLGRRTIRTNWA 108
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 159 GGQWLGGRQIRTNWA 173
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 67
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 68 MNGRKIMGKEVKVNWA 83
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 206 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVS 259
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 260 VNGTTIEGHVVKCYWG 275
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
+ + L++GGL+ V++ L AF +G++ + + D+ T + R FGFV F E A
Sbjct: 33 MSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATS 92
Query: 66 AMDNMDGAELYGRVLTVNYA 85
A+ MDG +L GR + V+YA
Sbjct: 93 ALSAMDGQDLNGRNIRVSYA 112
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 168 NWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRG 227
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+++MDG L R + N+A
Sbjct: 228 YGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWA 261
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E IL F G ++ VK D+ K ++GFV F + A +
Sbjct: 91 KRALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAER 150
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 151 AMQTLNGRRIHQSEIRVNWAY 171
>gi|428305437|ref|YP_007142262.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
gi|428246972|gb|AFZ12752.1| RNP-1 like RNA-binding protein [Crinalium epipsammum PCC 9333]
Length = 102
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L F +G +K V+ P D+ T + R FGFV ++ A+D
Sbjct: 2 SIYVGNLSYQVTEEDLTEVFAEYGTVKRVQLPTDRETGRMRGFGFVEMSTDDEETAAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 80 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 139
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 140 GGQWLGGRQIRTNWA 154
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 187 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVS 240
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 241 VNGTTIEGHVVKCYWG 256
>gi|52547949|gb|AAM28203.2| splicing factor 3b subunit 4 [Danio rerio]
Length = 400
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q +YVGGL E+V+E +L F+ G + + P D+ T +H+ +GFV FL +EDA A
Sbjct: 11 QDAAVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYA 70
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+ +LYG+ + VN A
Sbjct: 71 IKIMNMIKLYGKPIRVNKA 89
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTP---LDQATQKHRSFGFVTFLE 59
NL V N +++G L E++E +L+ F FG I ++TP D T + + F+ F
Sbjct: 95 NLDVGAN-IFIGNLDPEIDEKLLYDTFSAFGVI--LQTPKIMRDPDTGNSKGYAFINFAS 151
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWA 104
+ + A++ M+G L R +TV+YA + KG G AA+ + A
Sbjct: 152 FDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLA 196
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + F+ F E A A+ +
Sbjct: 204 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGHVVKCYWG 273
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF PFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 84 NGQWLGRRTIRTNWA 98
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ +D T + + +GF+TF + E A +A+D +
Sbjct: 251 LYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQL 310
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 311 NGFELAGRPMKVGHV 325
>gi|325185008|emb|CCA19499.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 430
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%)
Query: 3 NLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 62
NL +N ++V GL +V++ L+ F FGD+ K D AT + + FGF+T+ + +
Sbjct: 5 NLWRDRNKVFVAGLPRDVDDDALYNKFRAFGDMFQAKVVFDAATGRSKGFGFLTYRQYDH 64
Query: 63 AIQAMDNMDGAELYGRVLTVNYALPE 88
A+ A+D +G GRVL V + P+
Sbjct: 65 AMDAIDKTNGKNWNGRVLNVRFLKPK 90
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
++ A TLYVG L+ E+ E I+ F PFGDIK V+ T+K R FG+V F +
Sbjct: 110 ISTSAKNCTTLYVGNLSYEITEDIIRRVFSPFGDIKAVRLAQHIQTKKFRGFGYVQFYDT 169
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
E +A+ +G + GR + V+ +
Sbjct: 170 ESCTKAL-ATNGKIVIGRPMHVDLS 193
>gi|126658060|ref|ZP_01729212.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126620698|gb|EAZ91415.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 94
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V + L F +G +K V+ P D+ T K R FGFV + + A++
Sbjct: 2 SIYVGNLSYDVTQVDLEQVFAEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRALKVNKARP 79
>gi|81299490|ref|YP_399698.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
gi|1161278|gb|AAA85382.1| RNA-binding protein [Synechococcus elongatus PCC 7942]
gi|81168371|gb|ABB56711.1| RNA-binding region RNP-1 [Synechococcus elongatus PCC 7942]
Length = 107
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV EA L A F +G +K V+ P+D+ T + R FGFV + A+
Sbjct: 2 SIYVGNLSYEVTEADLTAVFTEYGAVKRVQLPIDRETGRMRGFGFVEMSADAEEDAAIAA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRGLRVNKAKP 79
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L+ EVN+ L AF F K+ D T + R +GFVTF ++EDA A+ M
Sbjct: 148 LFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTM 207
Query: 71 DGAELYGRVLTVNYA 85
+GA L GR + N+A
Sbjct: 208 NGAWLGGRAIRCNWA 222
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ +++ L AF FG++ + D+ T + R FGFV+F +
Sbjct: 27 LGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
+ A A+ MDG EL GR + VN A
Sbjct: 87 DSANNAIKEMDGKELNGRQIRVNLA 111
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 166
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 167 GGQWLGGRQIRTNWA 181
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 214 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 267
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 268 VNGTTIEGHVVKCYWG 283
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 65
Query: 71 DGAELYGRVLTVNYA 85
+G ++ G+ + VN+A
Sbjct: 66 NGRKIMGKEVKVNWA 80
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+ A
Sbjct: 100 DGQELQGRNIRVSIA 114
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 88 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 148 GGQWLGGRQIRTNWA 162
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K K +D T H + FV F E A + M+
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 59 GRKILGKEVKVNWA 72
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E I+ F PFG I +++ D + + FV F E A A+ +
Sbjct: 195 TVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVS 248
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 249 VNGTTIEGYVVKCYWG 264
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+A+L AF FG + D + D + K R +GF+ F +K DA QA+ M
Sbjct: 106 VFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 165
Query: 71 DGAELYGRVLTVNYA 85
+G L R + VN+A
Sbjct: 166 NGEWLGSRAIRVNWA 180
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHR-SFGFVTFLEKEDA 63
A ++ LYVG L+ V E +L F G ++ VK D+ Q ++GFV +++ A
Sbjct: 9 APRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAA 68
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
A+ ++G +++ + VN+A
Sbjct: 69 ETALQTLNGRKIFDTEIRVNWA 90
>gi|357017461|gb|AET50759.1| hypothetical protein [Eimeria tenella]
Length = 196
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q+ +L V L+ + + + +AF G +KDV PLD ++ R FGFV F +EDA +A
Sbjct: 8 QRMSLLVRNLSYQTSPEAVRSAFAVHGSVKDVYLPLDYHSRMPRGFGFVEFWHREDAERA 67
Query: 67 MDNMDGAELYGRVLTV 82
++ MDG EL G+ + V
Sbjct: 68 LEKMDGFELDGKAIEV 83
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 168 GGQWLGGRQIRTNWA 182
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 215 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 268
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 269 VNGTTIEGHVVKCYWG 284
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+N YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 17 RNAGYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAAL 74
Query: 68 DNMDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 75 AAMNGRKIMGKEVKVNWA 92
>gi|20257699|gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
gi|20257705|gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 78
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 79 NGKELDGRNITVNEA 93
>gi|20257679|gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 19 CFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 78
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 79 NGKELDGRNITVNEA 93
>gi|429859260|gb|ELA34048.1| splicing factor 3b subunit 4 [Colletotrichum gloeosporioides Nara
gc5]
Length = 363
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E + A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TIYIGNIDERASPAMVYEIMLQMGPIHNIHMPRDRVTQNHQGFGFVEFRTPGDAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQKQAEVG 100
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V+E IL+ F FG + + + + + FGF+++ + E + A+ N+
Sbjct: 103 LFVGNLDPMVDEKILYDTFSRFGPLVSLPKVAREDSGNSKGFGFISYADFESSDAAIANL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
G + + ++V YA + KG G AA+
Sbjct: 163 HGQYIASKEVSVQYAFKKDGKGERHGDAAE 192
>gi|427731365|ref|YP_007077602.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427367284|gb|AFY50005.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 100
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 47/79 (59%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L+A F +G +K V+ P D+ T + R FGFV + A++
Sbjct: 2 SVYVGNLSYDVTEDSLNAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMSSDAEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR L VN A P+
Sbjct: 62 LDGAEWMGRDLKVNKAKPK 80
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+ A
Sbjct: 100 DGQELQGRNIRVSIA 114
>gi|392579140|gb|EIW72267.1| hypothetical protein TREMEDRAFT_24060, partial [Tremella
mesenterica DSM 1558]
Length = 111
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+++GGL+ E+ E + F +G++ D+ P D+ T K R FGF+ + ++ + A+DNM
Sbjct: 32 VFIGGLSYEMTEGDVIIVFSQWGEVVDINLPRDKETGKTRGFGFLMYEDQRSTVLAVDNM 91
Query: 71 DGAELYGRVLTVNYA 85
+GA++ GR + V++
Sbjct: 92 NGAQILGRTIRVDHC 106
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L GGLA + L AF +G+I D K D+ T + R FGFVTF + + A++NM
Sbjct: 85 LPSGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENM 144
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 145 NGKELDGRNITVNQA 159
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 88 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 147
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 148 GGQWLGGRQIRTNWA 162
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 195 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 248
Query: 70 MDGAELYGRVLTVNYA 85
++G + G ++ +
Sbjct: 249 VNGTTIEGHIVKCYWG 264
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M+
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 59 GRKIMGKEVKVNWA 72
>gi|409991967|ref|ZP_11275186.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
gi|409937161|gb|EKN78606.1| RNA-binding region RNP-1 [Arthrospira platensis str. Paraca]
Length = 93
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V L AAF +G +K P D+ T + R FGFV +++ A+D
Sbjct: 2 SIYVGNLSYDVTPDDLSAAFAEYGTVKRSMIPTDRETGRSRGFGFVEMSSEDEEKVAIDA 61
Query: 70 MDGAELYGRVLTVNYALPE---RIKGG 93
+DGAE GR L VN A P R +GG
Sbjct: 62 LDGAEWKGRSLKVNKARPRDNNRQRGG 88
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+ A
Sbjct: 100 DGQELQGRNIRVSIA 114
>gi|351723119|ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
gi|255631115|gb|ACU15923.1| unknown [Glycine max]
Length = 176
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V++ ++GGLA ++ L F FG + + K +D+ + + R FGFVTF +K+ +
Sbjct: 4 VEEYRCFIGGLAWSTSDRKLKDTFEKFGKLIEAKVVVDKFSGRSRGFGFVTFDDKKAMDE 63
Query: 66 AMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
A+D M+G +L GR +TV+ A P++ G G
Sbjct: 64 AIDAMNGMDLDGRTITVDRAQPQQGSTGGDG 94
>gi|146422279|ref|XP_001487080.1| hypothetical protein PGUG_00457 [Meyerozyma guilliermondii ATCC
6260]
Length = 229
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K TLYVG L +VNEA+L+ I F I+ + P D+ H+ +GFV F EDA +
Sbjct: 16 KATLYVGNLDPQVNEALLYELLIQFAPIRSLNLPKDRVLGTHQGYGFVEFRGIEDANYVL 75
Query: 68 DNMDGAELYGRVLTVNYALP 87
+ + G LYG+ L + A P
Sbjct: 76 EILRGVRLYGKSLKLRRADP 95
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPL---DQATQKHRSFGFVTFLEKEDAIQAM 67
L+VG L ++E LH F FG + V+ P+ D T + + GF+TF + + +
Sbjct: 123 LFVGNLDPLIDEQYLHETFSKFGTM--VRPPVVIRDSETGESKRHGFLTFGDFQTTDSVI 180
Query: 68 DNMDGAELYGRVLTVNYALPE--------RIKGGEQ 95
+ M+GA L +++++YA E RI+ G++
Sbjct: 181 EKMNGAVLMNALISIDYAFKEDPANSNQKRIRHGDK 216
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L+ E L AF FGD+ V+ P DQ + K + FG+V F ++E A +A +
Sbjct: 210 TLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLPTDQESGKPKGFGYVEFGDQEGATKAYEA 269
Query: 70 MDGAELYGRVLTVNYALP 87
M G +L GR L ++Y+ P
Sbjct: 270 MKGKDLDGRTLRLDYSQP 287
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A + NT++VG L+ V+ L F G + + +D+ + K R F +V F +A
Sbjct: 106 AGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQ 165
Query: 65 QAMDNMDGAELYGRVLTVNYALPER 89
+A++ M+G ++ GR + V+ + P +
Sbjct: 166 KAVEEMNGKQIDGREVNVDISQPRQ 190
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF FG+I D K D+ T + R FGFVTF E++ A++ M
Sbjct: 10 CFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEM 69
Query: 71 DGAELYGRVLTVNYA 85
+G ++ GR +TVN A
Sbjct: 70 NGQDIDGRNITVNEA 84
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 49/85 (57%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ +++ L AF FG++ + D+ T + R FGFV+F +
Sbjct: 27 LGSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
+ A A+ MDG EL GR + VN A
Sbjct: 87 DSANNAIKEMDGKELNGRQIRVNLA 111
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG ++ + +E L +AF FG++ DV +D+ T + R F FVT E+A A + +
Sbjct: 6 LYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKIAAEKL 65
Query: 71 DGAELYGRVLTVNYALPE 88
+G +L GR LTVN A P+
Sbjct: 66 NGVDLGGRALTVNEARPK 83
>gi|353229125|emb|CCD75296.1| putative fuse-binding protein-interacting repressor siahbp1
[Schistosoma mansoni]
Length = 520
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YVG +A +V E L F PFG IK V D +TQKH+ F F+ F E A A+D
Sbjct: 95 NRVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAID 154
Query: 69 NMDGAELYGRVLTV 82
M+G GR L V
Sbjct: 155 QMNGTSFGGRQLKV 168
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKT-PLDQATQKHRSFGFVTFLEKEDAIQAM 67
N +YV G+ ++ E + F FG I K P +HR FG++ + + A A+
Sbjct: 192 NRIYVAGIHLDLTEDDVSLVFEAFGKIVFCKLQPDPTRPMRHRGFGYIEYESTQSAADAV 251
Query: 68 DNMDGAELYGRVLTVNYAL 86
+M+ L G++L V A+
Sbjct: 252 GSMNQFNLGGQLLRVCKAI 270
>gi|427728558|ref|YP_007074795.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
gi|427364477|gb|AFY47198.1| RRM domain-containing RNA-binding protein [Nostoc sp. PCC 7524]
Length = 94
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L+ EA L A F +G++K V P D+ T + R F FV E A+
Sbjct: 2 TIYVGNLSYRATEADLRAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDSQEDAAISE 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRQLRVNKAKP 79
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
L V ++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA
Sbjct: 110 LPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 169
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
A+ +M G L GR + N+A
Sbjct: 170 ENAIVHMGGQWLGGRQIRTNWA 191
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 214 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 267
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 268 HESAAHAIVSVNGTTIEGHVVKCYWG 293
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ------------ATQKHRS--- 51
Q TLYVG L+ +V E ++ F G K K +Q + +H S
Sbjct: 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDP 66
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ FV F E DA A+ M+G ++ G+ + VN+A
Sbjct: 67 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 100
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF P+G++ + K D+ T + R FGFVTF +++ A+D M
Sbjct: 10 CFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDAM 69
Query: 71 DGAELYGRVLTVNYA 85
+G L GR +TVN A
Sbjct: 70 NGKMLDGRSITVNPA 84
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF+ FGD+ + K D AT K + +GFV++ +EDA +A++ M
Sbjct: 130 VFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQM 189
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 190 NGQWLGRRTIRTNWA 204
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L + + L F G + K D F F+ F + A QA+
Sbjct: 38 TLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDP---FAFIEFGDHNQAGQALQA 94
Query: 70 MDGAELYGRVLTVNYAL 86
M+G L R + VN+A+
Sbjct: 95 MNGRSLLDREMRVNWAV 111
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF+PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 102 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 161
Query: 71 DGAELYGRVLTV 82
+GA + GR + V
Sbjct: 162 NGALMGGRNIKV 173
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YV + +++E + + F FG I K + H+ +GF+ + K+ +A+
Sbjct: 197 NRIYVASIHPDLSEEDIKSVFEAFGPILYCKLAPGTSLHTHKGYGFIEYANKQAMDEAIA 256
Query: 69 NMDGAELYGRVLTVNYAL 86
+M+ +L G++L V ++
Sbjct: 257 SMNLFDLGGQLLRVGRSI 274
>gi|168067714|ref|XP_001785753.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662601|gb|EDQ49434.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 79
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL+ E E + F+ FG++ VK D+ + + R FGFVTF + A A+
Sbjct: 5 NSVYVGGLSYESTEDTVRKHFMTFGEVLSVKIVHDKMSGESRGFGFVTFANQRSASMAIS 64
Query: 69 NMDGAELYGRVLTVN 83
+ DG ++ GR + VN
Sbjct: 65 DGDGVQIEGRCIRVN 79
>gi|256072869|ref|XP_002572756.1| fuse-binding protein-interacting repressor siahbp1 [Schistosoma
mansoni]
Length = 520
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YVG +A +V E L F PFG IK V D +TQKH+ F F+ F E A A+D
Sbjct: 95 NRVYVGSIAYDVKEDSLKQVFSPFGPIKSVNLSWDPSTQKHKGFAFLEFEYPEAAQLAID 154
Query: 69 NMDGAELYGRVLTV 82
M+G GR L V
Sbjct: 155 QMNGTSFGGRQLKV 168
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKT-PLDQATQKHRSFGFVTFLEKEDAIQAM 67
N +YV G+ ++ E + F FG I K P +HR FG++ + + A A+
Sbjct: 192 NRIYVAGIHLDLTEDDVSLVFEAFGKIVFCKLQPDPTRPMRHRGFGYIEYESTQSAADAV 251
Query: 68 DNMDGAELYGRVLTVNYAL 86
+M+ L G++L V A+
Sbjct: 252 GSMNQFNLGGQLLRVCKAI 270
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 208 GGQWLGGRQIRTNWA 222
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V EA++ F G K+ K +D T + + FV F E A A+ M+
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAMN 107
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 108 GRKIMGKEVKVNWA 121
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F E A A+ +
Sbjct: 255 TVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVS 308
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 309 VNGTTIEGHVVKCYWG 324
>gi|224091949|ref|XP_002309412.1| predicted protein [Populus trichocarpa]
gi|222855388|gb|EEE92935.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ E L AF +G + + K +D+A + + FGFVT+ +++A +A+D M
Sbjct: 41 LFVGGLSIYTTENGLSEAFSQYGQVVEAKIVMDRALDRSKGFGFVTYASEDEAQKALDEM 100
Query: 71 DGAELYGRVLTVNYA-LPERIKGG 93
+G L GRV+ V+YA L GG
Sbjct: 101 NGKALNGRVIYVDYAKLKTNFGGG 124
>gi|351725383|ref|NP_001238370.1| uncharacterized protein LOC100527079 [Glycine max]
gi|255631508|gb|ACU16121.1| unknown [Glycine max]
Length = 130
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ E L AF +G + + K D+ + + + FGFVTF +++A A+++M
Sbjct: 31 LFVGGLSFYTTENALSEAFSNYGQVIEAKIVTDRVSDRSKGFGFVTFASQDEAENAIEDM 90
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQP 101
G L GRV+ V+YA P GE A P
Sbjct: 91 KGKTLNGRVIFVDYAKPNINTRGEIPIARGP 121
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 105 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 164
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 165 GGQWLGGRQIRTNWA 179
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 16 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 73
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 74 MNGRKIMGKEVKVNWA 89
>gi|186685885|ref|YP_001869081.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
gi|186468337|gb|ACC84138.1| RNP-1 like RNA-binding protein [Nostoc punctiforme PCC 73102]
Length = 109
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L F +G +K V+ P D+ T + R F FV +++ +A+++
Sbjct: 2 SIYVGNLSYEVTQDALSTVFAEYGSVKRVQLPTDRETGRLRGFAFVEMSSEDEETKAIES 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E IL F G + VK D+ K ++GFV F + A +
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAY 170
>gi|282896900|ref|ZP_06304906.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
gi|281198309|gb|EFA73199.1| RNA-binding region protein RNP-1 [Raphidiopsis brookii D9]
Length = 92
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L+ EA L + F +G++K V P D+ T K R F FV +E A+
Sbjct: 2 TIYIGNLSYRATEADLKSVFADYGEVKRVVLPTDRETGKMRGFAFVEMIEDAQEDAAISE 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR L VN A P+
Sbjct: 62 LDGAEWMGRQLRVNKAKPK 80
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
>gi|86606333|ref|YP_475096.1| RNA-binding protein [Synechococcus sp. JA-3-3Ab]
gi|86554875|gb|ABC99833.1| putative RNA-binding protein [Synechococcus sp. JA-3-3Ab]
Length = 96
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T++VG L+ + +E L F +G +K +K P+D+ T + R F FV + D +A+D
Sbjct: 2 TIFVGNLSFKASEEDLRLVFSEYGTVKQIKLPVDRETGRKRGFAFVELENEADEQKAIDE 61
Query: 70 MDGAELYGRVLTVNYALPERIKGG 93
+DGA GR L VN A+P + G
Sbjct: 62 LDGATWMGRDLRVNKAMPRQAGAG 85
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 123 NWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRG 182
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 183 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 216
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LY+GGL + V E +L F G +++VK D+ QK ++GFV + + A +AM
Sbjct: 51 KRALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NQKGYNYGFVEYDDPGAAARAM 109
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 110 QTLNGRRVH--EIRVNWAY 126
>gi|427710388|ref|YP_007052765.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427362893|gb|AFY45615.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 106
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L++ F +G +K ++ P D+ T + R F FV + A+D
Sbjct: 2 SIYVGNLSYEVTQDALNSVFAEYGSVKRIQIPTDRETGRLRGFAFVEMSSDAEETAAIDA 61
Query: 70 MDGAELYGRVLTVNYALPERIKG 92
+DGAE GR L VN A P +G
Sbjct: 62 LDGAEWMGRDLKVNKAKPREDRG 84
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 11 LYVGGLA---EEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
LY+GGL + E L F PFGDI +V+ D T K + FGF+ F + +AI+AM
Sbjct: 248 LYIGGLLGPLSNITEQELKQLFNPFGDILEVEIHRDPYTGKSKGFGFIQFHKASEAIEAM 307
Query: 68 DNMDGAELYGRVLTVNYA 85
M+G E+ GR + V+YA
Sbjct: 308 TVMNGMEVAGREIKVSYA 325
>gi|449468384|ref|XP_004151901.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
gi|449522522|ref|XP_004168275.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 145
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+V GL+ ++E L AF FG++ +V+ D+ + + R FGFV F DA A D
Sbjct: 44 NKLFVAGLSWSMDERSLKDAFSSFGEVTEVRIVYDKDSGRSRGFGFVNFANGNDAQCAKD 103
Query: 69 NMDGAELYGRVLTVNYALPERIKG 92
MDG + GR L +++AL ++++G
Sbjct: 104 AMDGKAVLGRPLRISFAL-DKVRG 126
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E IL F G + VK D+ K ++GFV F + A +
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAY 170
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 121 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 180
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 181 DGEWLGSRAIRCNWA 195
>gi|443311860|ref|ZP_21041483.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
gi|442778096|gb|ELR88366.1| RRM domain-containing RNA-binding protein [Synechocystis sp. PCC
7509]
Length = 107
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +VNE + A F +G++K V+ P+D+ T + R F FV + + A+D
Sbjct: 2 SIYVGNLSYQVNEEDVTAVFKEYGNVKQVQVPMDRETGRPRGFCFVEMETEAEETAAIDA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRNLKVNKAKP 79
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF E E A +A++ +
Sbjct: 245 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSESECARRALEQL 304
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 305 NGFELAGRPMRVGH-VTERLDGG 326
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
L V ++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA
Sbjct: 93 LPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 152
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
A+ +M G L GR + N+A
Sbjct: 153 ENAIVHMGGQWLGGRQIRTNWA 174
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V E ++ F G K K + + + + FV F E DA A
Sbjct: 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 65 LAAMNGRKILGKEVKVNWA 83
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 197 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 250
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 251 HESAAHAIVSVNGTTIEGHVVKCYWG 276
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 157
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 158 GGQWLGGRQIRTNWA 172
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K +D T + + FV F E A +
Sbjct: 6 QPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVD--TAGNDPYCFVEFFEHRHAAAS 63
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 64 LAAMNGRKIMGKEVKVNWA 82
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +V+ D + + FV F E A A+ +
Sbjct: 205 TVYCGGVTTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVS 258
Query: 70 MDGAELYGRVLTVNYA 85
++G L G ++ +
Sbjct: 259 VNGTSLEGHIVKCYWG 274
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V A
Sbjct: 100 DGQELQGRNIRVTIA 114
>gi|388511641|gb|AFK43882.1| unknown [Lotus japonicus]
Length = 211
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 6 VQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQ 65
V + ++GGLA ++ L AF FG + + K +D+ + + R FGFVTF +K+ +
Sbjct: 4 VDEYRCFIGGLAWSTSDRKLKDAFEKFGKLTEAKVVVDKFSGRSRGFGFVTFDDKKAMDE 63
Query: 66 AMDNMDGAELYGRVLTVNYALPE 88
A+D M+G +L GR +TV+ A P+
Sbjct: 64 AIDAMNGMDLDGRTITVDKAQPQ 86
>gi|348501352|ref|XP_003438234.1| PREDICTED: cold-inducible RNA-binding protein A-like [Oreochromis
niloticus]
Length = 183
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ E NE L AAF +G I+ V D+ T + R FGFV + EDA A+D M
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNAEDAKDALDAM 66
Query: 71 DGAELYGRVLTVN 83
+G L GR + V+
Sbjct: 67 NGKTLDGRAIRVD 79
>gi|158340503|ref|YP_001521497.1| RNA-binding protein [Acaryochloris marina MBIC11017]
gi|158310744|gb|ABW32358.1| RNA-binding protein [Acaryochloris marina MBIC11017]
Length = 81
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%)
Query: 25 LHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNY 84
L+A F +G +K VK P D+ T + R F FV + +A+D ++GAEL GR L VN
Sbjct: 9 LNAVFAEYGTVKQVKMPTDRETGRKRGFAFVEMGNDAEEAKAIDELEGAELMGRTLKVNK 68
Query: 85 ALPERIKGGEQGW 97
A P +GG W
Sbjct: 69 ARPHENRGGGNRW 81
>gi|397570464|gb|EJK47313.1| hypothetical protein THAOC_33975 [Thalassiosira oceanica]
Length = 384
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+NTL V ++EE +EA L F PFG I V D+ T + R F FV+F+ +EDA +AM
Sbjct: 264 QNTLRVTNISEEASEADLQDLFSPFGRISRVYLAKDKETMQSRGFAFVSFVHREDAARAM 323
Query: 68 DNMDGAELYGRVLTVNYALPERIK 91
D + G +L + +A P K
Sbjct: 324 DKLQGHGYDHLILKLEWARPSAPK 347
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + +L AF +G+I D K D+ T + R FGFVTF ++ A+D M
Sbjct: 9 CFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGM 68
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 69 NGQDLDGRNITVNEA 83
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + +L AF +G+I D K D+ T + R FGFVTF ++ A+D M
Sbjct: 9 CFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGM 68
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 69 NGQDLDGRNITVNEA 83
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 309 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 368
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 369 NGFELAGRPMRVGH-VTERLDGG 390
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG I + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 182 IFVGDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 241
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 242 DGEWLGSRAIRCNWA 256
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL V E +L F G ++ VK D+ K ++GFV + + A +AM
Sbjct: 89 KRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 147
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 148 QTLNGRRVHQSEIRVNWAY 166
>gi|167382576|ref|XP_001736171.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165901525|gb|EDR27604.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 697
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+ L E + F FG+I ++ P+D+ T+K + FGFV F+ +DA++A + M
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 71 DGAELYGRVLTVNYA 85
D + GR++ V YA
Sbjct: 248 DNKFIKGRIVHVTYA 262
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDV---KTPLDQATQKHRSFGFVTFLEKEDAIQA 66
TLY+ L+ + E ++ F G + V KT D+ +K+ FGFV + EDAI A
Sbjct: 517 TLYIKNLSFKTKEDVIRKVFEKCGRVLAVTLSKTK-DKKVEKNSGFGFVEYARHEDAINA 575
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ + G + G + + + P+
Sbjct: 576 IKTLQGKVIDGHAVQIEISQPK 597
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L V + E N + F +G ++ V+ P + +++ F FV + K++A AM
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMA 674
Query: 69 NMDGAELYGRVLTVNYA 85
+ + YGR L + YA
Sbjct: 675 ALKNSHFYGRHLIIEYA 691
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVK---TPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ + L E +E IL F FG I D K TP + R FGF+ F ++ A A+
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGVS----RKFGFIGFENEDQAQTAI 59
Query: 68 DNMDGAELYGRVLTVNYA 85
M+GA + L V+ A
Sbjct: 60 TKMNGAYIQSSKLQVSLA 77
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed
[Oryza sativa Japonica Group]
Length = 117
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF FG+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC
7116]
Length = 95
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V + L F +G +K V+ P D+ T + R FGFV +++ A+
Sbjct: 2 SIYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR + VN A P
Sbjct: 62 LDGAEWMGRAMKVNKARP 79
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|119586630|gb|EAW66226.1| RNA binding motif protein 23, isoform CRA_e [Homo sapiens]
Length = 449
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 275 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 334
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 335 NGFELAGRPMRVGH-VTERLDGG 356
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L A FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + VN A
Sbjct: 100 DGQELQGRNIRVNIA 114
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 160 NWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRG 219
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 220 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 253
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 86 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 144
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 145 QTLNGRRVHQSEIRVNWAY 163
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V EA++ F G K K +D T H + FV F E A
Sbjct: 5 QPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATAT 62
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 63 IAAMNGRKILGKEVKVNWA 81
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E I+ F PFG I +++ D + + FV F E A A+ +
Sbjct: 204 TVYCGGVTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVS 257
Query: 70 MDGAELYGRVLTVNYA 85
++G + G V+ +
Sbjct: 258 VNGTTIEGYVVKCYWG 273
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 185 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 244
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 245 DGEWLGSRAIRCNWA 259
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G + VK P K ++GFV F + A +A
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 150 MQTLNGRRIHQSEIRVNWAY 169
>gi|145250071|ref|XP_001396549.1| spliceosome-associated protein 49 [Aspergillus niger CBS 513.88]
gi|134082060|emb|CAK42179.1| unnamed protein product [Aspergillus niger]
gi|350636041|gb|EHA24401.1| hypothetical protein ASPNIDRAFT_56267 [Aspergillus niger ATCC 1015]
Length = 351
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V E +L+ F FG++ ++ + +GFV+F + E + A+ NM
Sbjct: 103 LFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARDDNNLSKGYGFVSFADFESSDAAITNM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+G L + ++V YA + KG G
Sbjct: 163 NGQYLMNKQVSVQYAYKKDGKGERHG 188
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 243
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 244 DGEWLGSRAIRCNWA 258
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LY+GGL V E IL F G ++ VK D+ + K ++GFV + + A +AM
Sbjct: 91 KRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAM 149
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 150 ATLNGRRVHQSEIRVNWAY 168
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 98 VFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQHM 157
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 158 GGQWLGGRQIRTNWA 172
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V E ++ F G K K +D T + + FV F + A +
Sbjct: 6 QPRTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVD--TAGNDPYCFVEFYDHRHAAAS 63
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 64 LAAMNGRKIMGKEVKVNWA 82
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG++ + E ++ F PFG I +V+ D + + FV F E A A+ +
Sbjct: 205 TVYCGGVSTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVS 258
Query: 70 MDGAELYGRVLTVNYA 85
++G+ + G ++ +
Sbjct: 259 VNGSSIEGHIVKCYWG 274
>gi|259089109|ref|NP_001158591.1| cold inducible RNA binding protein [Oncorhynchus mykiss]
gi|225705082|gb|ACO08387.1| Cold-inducible RNA-binding protein [Oncorhynchus mykiss]
Length = 209
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL + +E L AF +G+I V D+ T++ R FGFVTF EDA AM M
Sbjct: 7 LFVGGLCFDTDETSLEEAFSKYGNIAKVDVVRDRETRRSRGFGFVTFENPEDAKDAMAAM 66
Query: 71 DGAELYGRVLTVN 83
+G + GR++ V+
Sbjct: 67 NGKSVDGRMIRVD 79
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL V E IL F G + VK D+ K ++GFV F + A +
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAER 149
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 150 AMQTLNGRRIHQSEIRVNWAY 170
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG LA ++ +L+ AF FG++K + LD+ + + R F FVT + A +A +
Sbjct: 92 LYVGNLAWSCDDEMLNQAFSQFGEVKAAEVVLDRESGRSRGFAFVTMASPDAAEKARRGL 151
Query: 71 DGAELYGRVLTVNYALPE 88
DG EL GR + VN+ P+
Sbjct: 152 DGTELAGRAIRVNFPQPK 169
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N LYVG L +++ +L F+ FG + + +D+ + + R F FV E+A +AM
Sbjct: 204 NRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDSGRSRGFAFVALSTPEEANEAMA 263
Query: 69 NMDGAELYGRVLTVNYA 85
N+DG E+ GR + VN A
Sbjct: 264 NLDGEEIGGRTIRVNLA 280
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AAF +G+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|3342756|gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + NE L +AF +GD+ D D+ T + R FGFVTF DA +A+ M
Sbjct: 9 LFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSDAKEALHAM 68
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + V+ A
Sbjct: 69 NGESLDGRQIRVDLA 83
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 243
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 244 DGEWLGSRAIRCNWA 258
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LY+GGL V E IL F G ++ VK D+ + K ++GFV + + A +AM
Sbjct: 91 KRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAM 149
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 150 STLNGRRVHQSEIRVNWAY 168
>gi|221220658|gb|ACM08990.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|304376965|gb|ACI70202.2| Cold-inducible RNA-binding protein [Salmo salar]
Length = 161
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + E L AF +G+I +D+ T + R FGFV + EDA AMD M
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + VN A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|209734900|gb|ACI68319.1| Cold-inducible RNA-binding protein [Salmo salar]
gi|303657347|gb|ADM15872.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 114
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + E L AF +G+I +D+ T + R FGFV + EDA AMD M
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + VN A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|198285593|gb|ACH85335.1| hyperosmotic glycine rich protein-like [Salmo salar]
gi|221219546|gb|ACM08434.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 160
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + E L AF +G+I +D+ T + R FGFV + EDA AMD M
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + VN A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|213513270|ref|NP_001133190.1| hyperosmotic glycine rich protein [Salmo salar]
gi|197632401|gb|ACH70924.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 126
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + E L AF +G+I +D+ T + R FGFV + EDA AMD M
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + VN A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|115398490|ref|XP_001214834.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
gi|114191717|gb|EAU33417.1| spliceosome-associated protein 49 [Aspergillus terreus NIH2624]
Length = 349
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYVGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDV-KTPLDQATQK-----HRSFGFVTFLEKEDAI 64
L+VG L V E +L+ F FG++ ++ K L + + +GFV+F + E +
Sbjct: 103 LFVGNLDPMVTEQVLYDTFSRFGNLINIPKASLFSWVARDDNNLSKGYGFVSFGDFESSD 162
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
A+ NM+G L + ++V YA + KG G
Sbjct: 163 AAIANMNGQYLMNKQVSVQYAYKKDGKGERHG 194
>gi|407039238|gb|EKE39532.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 697
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+ L E + F FG+I ++ P+D+ T+K + FGFV F+ +DA++A + M
Sbjct: 188 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 247
Query: 71 DGAELYGRVLTVNYA 85
D + GR++ V YA
Sbjct: 248 DNKFIKGRIVHVTYA 262
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDV---KTPLDQATQKHRSFGFVTFLEKEDAIQA 66
TLYV ++ + E ++ F G + V KT D+ +K+ FGFV + + EDAI A
Sbjct: 517 TLYVKNISFKTKEDVIRKVFEKCGRVLAVTLSKTK-DKKVEKNSGFGFVEYAKHEDAINA 575
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ + G + G + + + P+
Sbjct: 576 IKTLQGKVIDGHAVQIEISQPK 597
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L V + E N + F +G ++ V+ P + +++ F FV + K++A AM
Sbjct: 616 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMA 674
Query: 69 NMDGAELYGRVLTVNYA 85
+ + YGR L + YA
Sbjct: 675 ALKNSHFYGRHLIIEYA 691
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVK---TPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ + L E +E IL F FG I D K TP + R FGF+ F ++ A A+
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNS----RKFGFIGFENEDQAQTAI 59
Query: 68 DNMDGAELYGRVLTVNYA 85
M+GA + L V+ A
Sbjct: 60 TKMNGAYIQSSKLQVSLA 77
>gi|119589927|gb|EAW69521.1| cold inducible RNA binding protein, isoform CRA_b [Homo sapiens]
Length = 184
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A +A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +
Sbjct: 11 AAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENID 70
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA AM M+G + GR + V+ A
Sbjct: 71 DAKDAMMAMNGKSVDGRQIRVDQA 94
>gi|119586634|gb|EAW66230.1| RNA binding motif protein 23, isoform CRA_h [Homo sapiens]
Length = 467
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 293 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 352
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 353 NGFELAGRPMRVGH-VTERLDGG 374
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 160 NWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRG 219
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 220 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 253
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 86 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 144
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 145 QTLNGRRVHQSEIRVNWAY 163
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 50/82 (60%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
++ ++VGGL+ + +E L AF FG + D + +++ T +HR FGFVTF ++ A
Sbjct: 5 EEGRIFVGGLSWQTDERKLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRAVDSA 64
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ M G E+ GR ++VN A P+
Sbjct: 65 IKEMHGQEIDGRTISVNKAEPK 86
>gi|148906827|gb|ABR16559.1| unknown [Picea sitchensis]
Length = 347
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++ L VNE L F FG++ +V+ +D++ Q + +G+V F + DA +A+ M
Sbjct: 95 LHIANLTRNVNEGHLKEIFCSFGEVVNVELSMDRSVQLPKGYGYVEFKTRADAEKALLYM 154
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWA 98
DGA++ G V++ + LP R K A
Sbjct: 155 DGAQIDGNVVSARFTLPPRTKASTPPKA 182
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
L V ++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA
Sbjct: 93 LPVNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 152
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
A+ +M G L GR + N+A
Sbjct: 153 ENAIVHMGGQWLGGRQIRTNWA 174
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V E ++ F G K K + + + + FV F E DA A
Sbjct: 7 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAA 64
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 65 LAAMNGRKILGKEVKVNWA 83
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 197 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 250
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 251 HESAAHAIVSVNGTTIEGHVVKCYWG 276
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + + + D T + R +GFV F E+ DA +A++ M
Sbjct: 185 IFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAM 244
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 245 DGEWLGSRAIRCNWA 259
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G ++ VK P K ++GFV F + A +A
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 150 MQTLNGRRIHQSEIRVNWAY 169
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 148 NWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRG 207
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 208 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 241
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 74 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 132
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 133 QTLNGRRVHQSEIRVNWAY 151
>gi|358375675|dbj|GAA92254.1| splicing factor 3b subunit 4 [Aspergillus kawachii IFO 4308]
Length = 352
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V E +L+ F FG++ ++ + +GFV+F + E + A+ NM
Sbjct: 103 LFVGNLDPMVTEQVLYDTFSRFGNLVNIPKIARDDNNLSKGYGFVSFADFESSDAAITNM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+G L + ++V YA + KG G
Sbjct: 163 NGQYLMNKQVSVQYAYKKDGKGERHG 188
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 91 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 150
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 151 DGEWLGSRAIRCNWA 165
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 192 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSM 251
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 252 DGEWLGSRAIRCNWA 266
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL V E IL F G ++ VK D+ K ++GFV + + A +AM
Sbjct: 99 KRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDK-NSKGLNYGFVEYDDPGAAERAM 157
Query: 68 DNMDGAELYGRVLTVNYA 85
++G ++ + VN+A
Sbjct: 158 ATLNGRRVHQSEIRVNWA 175
>gi|220909892|ref|YP_002485203.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
gi|219866503|gb|ACL46842.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7425]
Length = 98
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V + L AF +G++K V P D+ T + R F FV + A++
Sbjct: 2 SIYVGNLSYDVTQNDLVRAFGEYGNVKSVHLPTDRETGRVRGFAFVEMENTPEETAAIEA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWAAQ 100
+DGAE GR L VN A P K GW+
Sbjct: 62 LDGAEWMGRDLKVNKAKPREDKRSSGGWSGN 92
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AF PFGD+ K D+ T + R FGF+TF ++ +A+ M
Sbjct: 4 CFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIKEM 63
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR +TVN A
Sbjct: 64 NGKELDGRNITVNQA 78
>gi|449707231|gb|EMD46930.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 685
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+ L E + F FG+I ++ P+D+ T+K + FGFV F+ +DA++A + M
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 71 DGAELYGRVLTVNYA 85
D + GR++ V YA
Sbjct: 249 DNKFIKGRIVHVTYA 263
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDV---KTPLDQATQKHRSFGFVTFLEKEDAIQA 66
TLYV ++ + E ++ F G + + KT D+ +K+ FGFV + + EDAI A
Sbjct: 505 TLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTK-DKKVEKNSGFGFVEYAKHEDAINA 563
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ + G + G + + + P+
Sbjct: 564 IKTLQGKVIDGHAVQIEISQPK 585
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L V + E N + F +G ++ V+ P + +++ F FV + K++A AM
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMA 662
Query: 69 NMDGAELYGRVLTVNYA 85
+ + YGR L + YA
Sbjct: 663 ALKNSHFYGRHLIIEYA 679
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVK---TPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ + L E +E IL F FG I D K TP + R FGF+ F ++ A A+
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNS----RKFGFIGFENEDQAQTAI 59
Query: 68 DNMDGAELYGRVLTVNYA 85
M+GA + L V+ A
Sbjct: 60 TKMNGAYIQSSKLQVSLA 77
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ ++ L AF FGD+ D + +D+ + + R FGFV F + E A +A+ M
Sbjct: 40 LFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAM 99
Query: 71 DGAELYGRVLTVNYA 85
DG EL GR + V+ A
Sbjct: 100 DGQELQGRNIRVSIA 114
>gi|67479353|ref|XP_655058.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472162|gb|EAL49670.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 685
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+Y+ L E + F FG+I ++ P+D+ T+K + FGFV F+ +DA++A + M
Sbjct: 189 IYITNLPFNCTEDDIRKEFDRFGNIAEIHLPIDKITKKSKGFGFVLFVVPQDAVKACNEM 248
Query: 71 DGAELYGRVLTVNYA 85
D + GR++ V YA
Sbjct: 249 DNKFIKGRIVHVTYA 263
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDV---KTPLDQATQKHRSFGFVTFLEKEDAIQA 66
TLYV ++ + E ++ F G + + KT D+ +K+ FGFV + + EDAI A
Sbjct: 505 TLYVKNISFKTKEDVIRKVFEKCGRVLAITLSKTK-DKKVEKNSGFGFVEYAKHEDAINA 563
Query: 67 MDNMDGAELYGRVLTVNYALPE 88
+ + G + G + + + P+
Sbjct: 564 IKTLQGKVIDGHAVQIEISQPK 585
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L V + E N + F +G ++ V+ P + +++ F FV + K++A AM
Sbjct: 604 NKLLVKNVPFETNIKEVRELFRTYGTLRGVRLP-KKVDGQNKGFAFVEYATKQEAANAMA 662
Query: 69 NMDGAELYGRVLTVNYA 85
+ + YGR L + YA
Sbjct: 663 ALKNSHFYGRHLIIEYA 679
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVK---TPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+ + L E +E IL F FG I D K TP + R FGF+ F ++ A A+
Sbjct: 4 IIIKNLPERADEKILKQQFEKFGGITDCKVMRTPQGNS----RKFGFIGFENEDQAQTAI 59
Query: 68 DNMDGAELYGRVLTVNYA 85
M+GA + L V+ A
Sbjct: 60 TKMNGAYIQSSKLQVSLA 77
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + + + D T + R +GFV F ++ DA +A+ +M
Sbjct: 185 IFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSM 244
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 245 DGEWLGSRAIRCNWA 259
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA--TQKHRSFGFVTFLEKEDAIQ 65
K LYVGGL + V E IL F G + VK D+ K ++GFV F + A +
Sbjct: 89 KRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAER 148
Query: 66 AMDNMDGAELYGRVLTVNYAL 86
AM ++G ++ + VN+A
Sbjct: 149 AMQTLNGRRIHQSEIRVNWAY 169
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQ-KHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G ++ VK D+ Q K ++GFV + + A +A
Sbjct: 91 KRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 151 MQTLNGRRVHQSEIRVNWAY 170
>gi|358392239|gb|EHK41643.1| hypothetical protein TRIATDRAFT_84569 [Trichoderma atroviride IMI
206040]
Length = 387
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A+++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TVYIGNIDERATSAMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ + E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQRSAEVG 100
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E +L+ F FG + + + + + FGFV++ + E + A+ N+
Sbjct: 103 LFIGNLDPMVDEKVLYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAIANL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G + + ++V YA + KG G
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGDRHG 188
>gi|20257709|gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L+ AF +G++ + K LD+ TQ+ R FGFVTF A++ M
Sbjct: 19 CFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEGM 78
Query: 71 DGAELYGRVLTVN 83
+G EL GR +TVN
Sbjct: 79 NGKELDGRNITVN 91
>gi|238493972|ref|XP_002378222.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
gi|317148789|ref|XP_001822912.2| spliceosome-associated protein 49 [Aspergillus oryzae RIB40]
gi|220694872|gb|EED51215.1| splicing factor 3b subunit 4 [Aspergillus flavus NRRL3357]
Length = 354
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V E +L+ F FG++ ++ + +GFV+F + E + A+ NM
Sbjct: 103 LFVGNLDPMVTEQVLYNTFSRFGNLINLPKIARDDNNLSKGYGFVSFGDFESSDAAIANM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+G L + ++V YA + KG G
Sbjct: 163 NGQYLMNKQVSVQYAYKKDGKGERHG 188
>gi|116734698|ref|NP_001070820.1| probable RNA-binding protein 23 isoform 3 [Homo sapiens]
gi|119586628|gb|EAW66224.1| RNA binding motif protein 23, isoform CRA_c [Homo sapiens]
Length = 405
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 291 NGFELAGRPMRVGH-VTERLDGG 312
>gi|261858408|dbj|BAI45726.1| RNA binding motif protein 23 [synthetic construct]
Length = 406
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 291 NGFELAGRPMRVGH-VTERLDGG 312
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF +GD+ D K D+ T + R FGFVTF +++ A++ M
Sbjct: 10 CFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 70 NGQDLDGRSITVNEA 84
>gi|7022544|dbj|BAA91638.1| unnamed protein product [Homo sapiens]
Length = 406
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 291 NGFELAGRPMRVGH-VTERLDGG 312
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+++ D T + +GF+TF E E A +A++ +
Sbjct: 265 LYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFITFSESECARRAVEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + L ER GG
Sbjct: 325 NGFELAGRPMRVGH-LTERADGG 346
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ IL AF FG + + + D T + R +GFV F E+ DA +A++ M
Sbjct: 185 IFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAM 244
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 245 DGEWLGSRAIRCNWA 259
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G ++ VK P K ++GFV F + A +A
Sbjct: 90 KRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 150 MQTLNGRRIHQSEIRVNWAY 169
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L E++ L AF+ FG++ + K D T K + +GFV++ +EDA +A+D M
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 71 DGAELYGRVLTVNYA 85
+GA L R + N+A
Sbjct: 194 NGAWLGRRTIRTNWA 208
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 12/92 (13%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
A ++YVG +A + E + AF FG I +V+ T K + + FV F KE A
Sbjct: 252 AADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAA 304
Query: 65 QAMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
+A+ M+ A++ G+++ ++ K G+ G
Sbjct: 305 RAIVQMNNADIGGQIVRCSWG-----KSGDSG 331
>gi|417408518|gb|JAA50808.1| Putative rna-binding protein seb4 rrm superfamily, partial
[Desmodus rotundus]
Length = 193
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A +A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +
Sbjct: 20 ATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENID 79
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA AM M+G + GR + V+ A
Sbjct: 80 DAKDAMMAMNGKSVDGRQIRVDQA 103
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG I + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 185 IFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 244
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 245 DGEWLGSRAIRCNWA 259
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL V E +L F G ++ VK D+ + ++GFV + + A +AM
Sbjct: 92 KRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDK-NHRGYNYGFVEYDDPGAAERAM 150
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 151 QTLNGRRVHQNEIRVNWAY 169
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+ +VGGLA + L AF +G++ D K D+ T + R FGFVTF +++ +A+
Sbjct: 8 SCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISG 67
Query: 70 MDGAELYGRVLTVN 83
M+G+EL GR +TVN
Sbjct: 68 MNGSELDGRNITVN 81
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK---EDAIQAM 67
++G L+ ++ L AF FG++ D K LD+ + + R FGFVTF +K EDAI+AM
Sbjct: 9 CFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAM 68
Query: 68 DNMDGAELYGRVLTVNYALPERIKG 92
+ MD L GR +TV+ A P++ G
Sbjct: 69 NGMD---LDGRAITVDKAQPQQGSG 90
>gi|121703528|ref|XP_001270028.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
gi|119398172|gb|EAW08602.1| splicing factor 3b subunit 4 [Aspergillus clavatus NRRL 1]
Length = 354
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKSVEIG 100
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V E +L+ F FG + ++ + +GFV+F + E + A+ NM
Sbjct: 103 LFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARDDNNLSKGYGFVSFADFESSDAAIANM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+G L + ++V YA + KG G
Sbjct: 163 NGQYLMNKQVSVQYAYKKDGKGERHG 188
>gi|397473315|ref|XP_003808160.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Pan paniscus]
Length = 408
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 291 NGFELAGRPMRVGH-VTERLDGG 312
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|12803481|gb|AAH02566.1| RNA binding motif protein 23 [Homo sapiens]
gi|189055004|dbj|BAG37988.1| unnamed protein product [Homo sapiens]
gi|312151810|gb|ADQ32417.1| RNA binding motif protein 23 [synthetic construct]
Length = 424
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 169
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA +E L AF FG++ D K D+ T + R FGFVTF +++ A++ M
Sbjct: 10 CFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGM 69
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 70 NGQDLDGRSITVNEA 84
>gi|185133178|ref|NP_001117016.1| hyperosmotic glycine rich protein [Salmo salar]
gi|28173040|gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + E L AF +G+I +D+ T + R FGFV + EDA AMD M
Sbjct: 7 LFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G L GR + VN A
Sbjct: 67 NGQSLDGRTIRVNEA 81
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 160 NWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRG 219
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 220 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 253
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 86 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 144
Query: 68 DNMDGAELYGRVLTVNYAL 86
N++G ++ + VN+A
Sbjct: 145 QNLNGRRVHQSEIRVNWAY 163
>gi|282898657|ref|ZP_06306645.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281196525|gb|EFA71434.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 96
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 43/79 (54%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L+ EA L A F +G++K V P D+ T K R F FV E A+
Sbjct: 2 TIYIGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGKMRGFAFVEMNEDAQEDAAISE 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR L VN A P+
Sbjct: 62 LDGAEWMGRQLRVNKAKPK 80
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+V G+A + E L F FG + V+ + T+ R FGF++F E+A A+D
Sbjct: 101 NDLFVSGIASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAID 160
Query: 69 NMDGAELYGRVLTV 82
N++ E YGRVL V
Sbjct: 161 NLNSQEFYGRVLNV 174
>gi|425434353|ref|ZP_18814822.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|425450092|ref|ZP_18829924.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
gi|389676152|emb|CCH94759.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
9432]
gi|389769241|emb|CCI05872.1| putative RNA-binding protein rbpA [Microcystis aeruginosa PCC
7941]
Length = 100
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L +V L F +G + V P+D+ T K R FGFV E+ +A++
Sbjct: 2 TIYVGNLVYDVTTNDLQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIET 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR + VN A P+
Sbjct: 62 LDGAEWMGRQMKVNKARPK 80
>gi|116734694|ref|NP_060577.3| probable RNA-binding protein 23 isoform 2 [Homo sapiens]
gi|18848317|gb|AAH24208.1| RNA binding motif protein 23 [Homo sapiens]
gi|119586627|gb|EAW66223.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
gi|119586633|gb|EAW66229.1| RNA binding motif protein 23, isoform CRA_b [Homo sapiens]
Length = 423
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|172038014|ref|YP_001804515.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|171699468|gb|ACB52449.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
Length = 108
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV + L F +G +K V+ P D+ T K R FGFV + + A++
Sbjct: 16 SIYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEA 75
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 76 LDGAEWMGRALKVNKARP 93
>gi|449500867|ref|XP_004161215.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + L AF +G + + +D+ + K + FGFVTF ++A A+ M
Sbjct: 37 LFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEM 96
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQP 101
+G L GRV+ VNYA P G A P
Sbjct: 97 NGKPLNGRVIFVNYAKPTTSSRGAIPIARGP 127
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|388583666|gb|EIM23967.1| RNA-binding domain-containing protein, partial [Wallemia sebi CBS
633.66]
Length = 111
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ---ATQKHRSFGFVTFLEKEDAI 64
K T++V + VN+ L +F FG+I D++ P Q + HR FGF+ + +DA
Sbjct: 3 KRTVWVSNVDFSVNKDGLFGSFSTFGNILDIQLPEPQEKFSKNPHRGFGFIEYDNAQDAS 62
Query: 65 QAMDNMDGAELYGRVLTVNYALP 87
A+DNMD L G+V+ NYA P
Sbjct: 63 NAIDNMDMNILAGKVIKCNYAKP 85
>gi|241951780|ref|XP_002418612.1| RNA binding protein, putative; spliceosome associated protein,
putative [Candida dubliniensis CD36]
gi|223641951|emb|CAX43915.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 259
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+LY G + +V E +++ FI FG IK + P D+ + H+ +GFV F DA MD
Sbjct: 18 SLYFGNIDPQVTELLMYELFIQFGPIKSINMPKDRILKTHQGYGFVEFKNSADAKYTMDI 77
Query: 70 MDGAELYGRVL 80
+ G LYG+ L
Sbjct: 78 LRGVRLYGKAL 88
>gi|449462934|ref|XP_004149190.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 134
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ + L AF +G + + +D+ + K + FGFVTF ++A A+ M
Sbjct: 37 LFVGGLSYYTTDKGLSEAFSQYGQVIEATVVMDRVSDKSKGFGFVTFASLDEAHTALSEM 96
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQP 101
+G L GRV+ VNYA P G A P
Sbjct: 97 NGKPLNGRVIFVNYAKPTTSSRGAIPIARGP 127
>gi|357123042|ref|XP_003563222.1| PREDICTED: zinc finger CCCH domain-containing protein 25-like
[Brachypodium distachyon]
Length = 385
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 48/74 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGG+ ++ E L A F +G++ DV D+AT K + F FV + ++ + A+DN+
Sbjct: 38 VFVGGVPYDLTEGDLLAVFAQYGEVVDVNLVRDKATGKSKGFAFVAYEDQRSTVLAVDNL 97
Query: 71 DGAELYGRVLTVNY 84
+GA++ GR++ V++
Sbjct: 98 NGAKVLGRIIRVDH 111
>gi|387539270|gb|AFJ70262.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 423
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 165 NWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRG 224
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F E+ DA +A+ +MDG L R + N+A
Sbjct: 225 YGFVAFRERADAEKALTSMDGEWLGSRAIRCNWA 258
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVK-TPLDQATQKHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G + VK P K ++GFV F + A +A
Sbjct: 89 KRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERA 148
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 149 MQTLNGRRIHQSEIRVNWAY 168
>gi|449664731|ref|XP_002156267.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Hydra
magnipapillata]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T++VG L +++ ++ L AF PFG+I + K D AT+K +++GF++F K DA +A+ +
Sbjct: 72 TIFVGDLDDDLTDSELRQAFEPFGEILNAKVVRDAATEKSKNYGFISFTNKPDAERAIRD 131
Query: 70 MDGAELYGRVLTVNYA 85
M GA L R + N+A
Sbjct: 132 MHGAMLKRRPIKTNWA 147
>gi|409079599|gb|EKM79960.1| hypothetical protein AGABI1DRAFT_113205 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL+ +++E + F +G+I DV P D+ T K + FGFV + ++ + A+DN+
Sbjct: 34 IFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 71 DGAELYGRVLTV----NYALPERIKGGEQGWA 98
+GA++ R L V NY P ++K + W
Sbjct: 94 NGAKVLERTLRVDHVRNYKQP-KVKNEDGEWV 124
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K +L V L + F FGD++DV PLD TQK R F FV F + DA A
Sbjct: 32 KVSLLVRNLTFRTRVDDVKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHAR 91
Query: 68 DNMDGAELYGRVLTVNYA 85
D +DG L GR ++V YA
Sbjct: 92 DRLDGYNLDGRNISVLYA 109
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 2 ANLAVQK-----NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVT 56
A L++QK LYVG L E + E ++ F PFG ++ V+ D A R +GF+T
Sbjct: 189 AQLSLQKAALGPTKLYVGSLHENITEEMIKGIFSPFGRVEQVQIIKDDAGAS-RGYGFIT 247
Query: 57 FLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
F E E A +A+D ++G E+ G+ + +N QG A+ P + D D
Sbjct: 248 FAEAECAKRALDQLNGFEIAGKPIKLNTVSYGTDMNAMQGLASGPSFLDND 298
>gi|82248148|sp|Q9PTX2.1|CIRBP_RANCA RecName: Full=Cold-inducible RNA-binding protein; Short=BFCIRP;
AltName: Full=Glycine-rich RNA-binding protein CIRP
gi|6682989|dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
++ + L+VGGL+ + +E L F +G I++V D+ T++ R FGFVTF EDA
Sbjct: 1 MSCDEGKLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
AM M+G + GR + V+ A
Sbjct: 61 KDAMAGMNGKTVDGRQIRVDQA 82
>gi|67920522|ref|ZP_00514042.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416377747|ref|ZP_11683649.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
gi|67858006|gb|EAM53245.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357266170|gb|EHJ14837.1| RNA-binding protein [Crocosphaera watsonii WH 0003]
Length = 94
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG ++ +V L F +G +K V P D+ T K R FGFV ++ A++
Sbjct: 2 TIYVGNISYDVTPEDLTEVFGDYGTVKRVSLPTDRETGKPRGFGFVEMDNDDEETAAIEE 61
Query: 70 MDGAELYGRVLTVNYALPERIKGG 93
+DGAE GR + VN A P KGG
Sbjct: 62 LDGAEWLGRQMRVNKAKPRENKGG 85
>gi|384947948|gb|AFI37579.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|166367328|ref|YP_001659601.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|425440525|ref|ZP_18820825.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
gi|166089701|dbj|BAG04409.1| RNA-binding region protein [Microcystis aeruginosa NIES-843]
gi|389719028|emb|CCH97091.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC
9717]
Length = 100
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L +V L F +G + V P+D+ T K R FGFV E+ +A++
Sbjct: 2 TIYVGNLVYDVTTDDLKEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAKAIET 61
Query: 70 MDGAELYGRVLTVNYALP--ERIKGGEQG 96
+DGAE GR + VN A P + GG +G
Sbjct: 62 LDGAEWMGRQMKVNKARPKEDNFGGGGRG 90
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 326 NGFELAGRPMRVGH-VTERLDGG 347
>gi|380814242|gb|AFE78995.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
gi|383419605|gb|AFH33016.1| putative RNA-binding protein 23 isoform 2 [Macaca mulatta]
Length = 425
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|443316722|ref|ZP_21046156.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
gi|442783689|gb|ELR93595.1| RRM domain-containing RNA-binding protein [Leptolyngbya sp. PCC
6406]
Length = 105
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ EV EA L + F +G +K V+ P D+ T + R FGFV + + A++
Sbjct: 2 SIYVGNLSYEVTEADLTSVFTEYGSVKRVQLPTDRETGRMRGFGFVEMGAESEEAAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKAKP 79
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A +A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +
Sbjct: 46 ATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENID 105
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA AM M+G + GR + V+ A
Sbjct: 106 DAKDAMMAMNGKSVDGRQIRVDQA 129
>gi|358389660|gb|EHK27252.1| hypothetical protein TRIVIDRAFT_229059 [Trichoderma virens Gv29-8]
Length = 385
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E +++ + G I ++ P D+ TQ H+ FGFV F DA A +
Sbjct: 14 TVYIGNIDERATSTMVYEIMLQMGPIHNIHMPRDRVTQTHQGFGFVEFRTPADAEYAANV 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G +LYG+ L VN A ++ K E G
Sbjct: 74 MNGIKLYGKSLRVNKASADKQKAAEVG 100
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++G L V+E IL+ F FG + + + + + FGFV++ + E + A+ N+
Sbjct: 103 LFIGNLDPMVDEKILYDTFSRFGPLLSIPKVAREDSGASKGFGFVSYGDFESSDAAISNL 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G + + ++V YA + KG G
Sbjct: 163 HGQYILSKEVSVQYAFKKDGKGERHG 188
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A +A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +
Sbjct: 26 AAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENID 85
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA AM M+G + GR + V+ A
Sbjct: 86 DAKDAMMAMNGKSVDGRQIRVDQA 109
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 325 NGFELAGRPMRVGH-VTERLDGG 346
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 5 AVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAI 64
+ + +++GG++ + ++ L AF +G++ + +D+ T + R FGFVT+ E+A
Sbjct: 36 CMSSSKIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEAS 95
Query: 65 QAMDNMDGAELYGRVLTVNYAL--PER 89
A+ MDG +L+GR + VNYA P+R
Sbjct: 96 SAIQAMDGQDLHGRRVRVNYATERPQR 122
>gi|427726014|ref|YP_007073291.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
gi|427357734|gb|AFY40457.1| RNP-1 like RNA-binding protein [Leptolyngbya sp. PCC 7376]
Length = 100
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++Y+G L+ EV E L F +G +K V+ P D+ T + R F FV + E+ + A++
Sbjct: 2 SIYIGNLSYEVTEDDLRDVFADYGTVKRVQIPTDRETSRPRGFAFVEMSKDEEELAAIEA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGA+ GR L VN A P
Sbjct: 62 LDGADWMGRQLKVNKARP 79
>gi|432915990|ref|XP_004079241.1| PREDICTED: cold-inducible RNA-binding protein-like [Oryzias
latipes]
Length = 174
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL+ E NE L AAF +G I+ V D+ T + R FGFV + EDA A+D M
Sbjct: 7 LFIGGLSFETNEDSLAAAFGKYGTIEKVDVIRDKETGRSRGFGFVKYDNVEDAKDALDAM 66
Query: 71 DGAELYGRVLTVN 83
+G L GR + V+
Sbjct: 67 NGKTLDGRAIRVD 79
>gi|346322787|gb|EGX92385.1| splicing factor 3b subunit 4 [Cordyceps militaris CM01]
Length = 404
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G + E A ++ + G I ++ P D+ TQ H+ FGFV F DA A
Sbjct: 14 TIYMGNIDERATPATMYEIMLQMGPIHNIHMPRDRVTQSHQGFGFVEFRTPSDAEYAAAV 73
Query: 70 MDGAELYGRVLTVNYALPER 89
M+G +LYG+ L VN A +R
Sbjct: 74 MNGVKLYGKSLRVNKASADR 93
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 41/86 (47%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L +E +L+ F FG + + + FGF++F + + A +A++ +
Sbjct: 113 LFVGNLDPSCDEKVLYDTFSRFGPLLSLPKIARDDNAVSKGFGFISFADFDSADEAIETL 172
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
G L + +TV +A KG G
Sbjct: 173 SGTYLLSQQVTVQFAFKRDGKGERHG 198
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 160 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSM 219
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 220 DGEWLGSRAIRCNWA 234
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSM 243
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 244 DGEWLGSRAIRCNWA 258
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LY+GGL V E IL F G ++ VK D+ + K ++GFV + + A +AM
Sbjct: 91 KRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAM 149
Query: 68 DNMDGAELYGRVLTVNYA 85
++G ++ + VN+A
Sbjct: 150 STLNGRRVHQSEIRVNWA 167
>gi|22299798|ref|NP_683045.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
gi|22295982|dbj|BAC09807.1| RNA-binding protein [Thermosynechococcus elongatus BP-1]
Length = 94
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ + L A F +G +K V P+D+ T + R FGFV + A+ +
Sbjct: 2 SIYVGNLSYTATQEDLEAVFAEYGSVKQVYLPVDRETGRKRGFGFVEMSSDAEEEAAIAD 61
Query: 70 MDGAELYGRVLTVNYALPERIKGG 93
+DGAE GR L VN A P GG
Sbjct: 62 LDGAEWMGRQLKVNKARPREAMGG 85
>gi|401411525|ref|XP_003885210.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
gi|325119629|emb|CBZ55182.1| hypothetical protein NCLIV_056060 [Neospora caninum Liverpool]
Length = 642
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 11 LYVGGLAE---EVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+YVGGL + ++ E L F PFG I +V+ P D T R +GFVT+ DA +AM
Sbjct: 331 VYVGGLVDSLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAM 390
Query: 68 DNMDGAELYGRVLTVNYA 85
+M+ EL G+ L V YA
Sbjct: 391 QHMNNFELLGQQLRVGYA 408
>gi|168061382|ref|XP_001782668.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665828|gb|EDQ52499.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 82
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N++YVGGL+ E L +F+ FG++ VK D+ + + R FGFVTF A A+
Sbjct: 5 NSVYVGGLSYGSTEETLKRSFMQFGEVVSVKIVHDRDSGESRGFGFVTFSNPRAATVAIQ 64
Query: 69 NMDGAELYGRVLTVN 83
+MDG ++ GR + VN
Sbjct: 65 DMDGRQIEGRTIRVN 79
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 326 NGFELAGRPMRVGH-VTERLDGG 347
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGG++ + ++ L AF +G++ + + +D+ T + R F FVT+ E+A A+ +
Sbjct: 42 VFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQAL 101
Query: 71 DGAELYGRVLTVNYA 85
DG +L+GR + VNYA
Sbjct: 102 DGQDLHGRRVRVNYA 116
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 186 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 245
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 246 DGEWLGSRAIRCNWA 260
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQ-KHRSFGFVTFLEKEDAIQA 66
K LYVGGL V E IL F G ++ VK D+ Q K ++GFV + + A +A
Sbjct: 91 KRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 67 MDNMDGAELYGRVLTVNYAL 86
M ++G ++ + VN+A
Sbjct: 151 MQTLNGRRVHQSEIRVNWAY 170
>gi|426192446|gb|EKV42382.1| hypothetical protein AGABI2DRAFT_195726 [Agaricus bisporus var.
bisporus H97]
Length = 298
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL+ +++E + F +G+I DV P D+ T K + FGFV + ++ + A+DN+
Sbjct: 34 VFVGGLSYDLSEGDVITIFSQYGEIMDVNLPRDKETGKTKGFGFVMYEDQRSTVLAVDNL 93
Query: 71 DGAELYGRVLTV----NYALPERIKGGEQGWA 98
+GA++ R L V NY P ++K + W
Sbjct: 94 NGAKVLERTLRVDHVRNYKQP-KVKNEDGEWV 124
>gi|402224571|gb|EJU04633.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731
SS1]
Length = 147
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQA----TQKHRSFGFVTFLEKEDA 63
K T+++G L E+++ L AAF FGDI D P D A Q +R F+T+ DA
Sbjct: 8 KRTVFIGNLGSEIDQNALVAAFSTFGDIVDATIPSDLARDNVNQTYRGIAFLTYTSPADA 67
Query: 64 IQAMDNMDGAELYGRVLTVNYALPERIKG 92
A+DNMD R+L V+ A P IKG
Sbjct: 68 QDAIDNMDLNIFRERILRVSLARP--IKG 94
>gi|332222974|ref|XP_003260644.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Nomascus
leucogenys]
Length = 426
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I +++ D T + + +GF+TF + EDA +A++ +
Sbjct: 258 LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQL 317
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 318 NGFELAGRPMKVGHV 332
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ +L AF FG + + + D T + R
Sbjct: 159 NWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRG 218
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 219 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 252
Score = 42.4 bits (98), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 85 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 143
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 144 QTLNGRRVHQSEIRVNWAY 162
>gi|119589931|gb|EAW69525.1| cold inducible RNA binding protein, isoform CRA_d [Homo sapiens]
Length = 311
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 2 ANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 61
A +A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +
Sbjct: 11 AAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENID 70
Query: 62 DAIQAMDNMDGAELYGRVLTVNYA 85
DA AM M+G + GR + V+ A
Sbjct: 71 DAKDAMMAMNGKSVDGRQIRVDQA 94
>gi|440295453|gb|ELP88366.1| multiple RNA-binding domain containing protein, putative [Entamoeba
invadens IP1]
Length = 685
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+ V L +E + AF FG+I +V P+D+ + K + F FV ++ +DA++A + M
Sbjct: 215 ILVNNLPYACSEQDVREAFEKFGEITEVHLPIDKVSGKTKGFAFVMYVVPQDAVKAFNEM 274
Query: 71 DGAELYGRVLTVNYA 85
DG + GR++ VNYA
Sbjct: 275 DGQVIKGRIIHVNYA 289
>gi|395503034|ref|XP_003755878.1| PREDICTED: probable RNA-binding protein 23 [Sarcophilus harrisii]
Length = 451
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + FGF+TF + E A +A++ +
Sbjct: 277 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 336
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 337 NGFELAGRPMRVGH-VTERLDGG 358
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 3 NLAVQKNT-----------LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRS 51
N A Q NT ++VG L+ EVN+ IL AF FG + + + D T + R
Sbjct: 150 NWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRG 209
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+GFV F ++ DA +A+ +MDG L R + N+A
Sbjct: 210 YGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWA 243
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL + V E +L F G +++VK D+ K ++GFV + + A +AM
Sbjct: 76 KRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDK-NAKGYNYGFVEYDDPGAAERAM 134
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 135 QTLNGRRVHQSEIRVNWAY 153
>gi|126277396|ref|XP_001369125.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Monodelphis
domestica]
Length = 449
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + FGF+TF + E A +A++ +
Sbjct: 275 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 334
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 335 NGFELAGRPMRVGH-VTERLDGG 356
>gi|9964085|gb|AAG09816.1|AF278702_1 cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L++GGL E NE L AF +G I +V D+ T++ R FGFVTF +DA AM M
Sbjct: 7 LFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66
Query: 71 DGAELYGRVLTVNYA 85
+G + GR + V+ A
Sbjct: 67 NGKSVDGRQIRVDQA 81
>gi|119467844|ref|XP_001257728.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
gi|119405880|gb|EAW15831.1| splicing factor 3b subunit 4 [Neosartorya fischeri NRRL 181]
Length = 352
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L E V ++++ + G I +V P D+ TQ H+ +GFV F+ +EDA A
Sbjct: 14 TVYIGNLDERVTDSLVWELMLQAGRIVNVHLPKDRVTQSHQGYGFVEFISEEDAEYASRI 73
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQG 96
M+G LYG+ + VN A ++ K E G
Sbjct: 74 MNGIRLYGKPIRVNKASADKQKAVEIG 100
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L V E +L+ F FG + ++ + +GFV+F + E + A+ NM
Sbjct: 103 LFVGNLDPLVTEQVLYDTFSRFGTLVNIPKVARDDNNLSKGYGFVSFADFESSDAAIANM 162
Query: 71 DGAELYGRVLTVNYALPERIKGGEQG 96
+G L + ++V YA + KG G
Sbjct: 163 NGQYLMNKQVSVQYAYKKDGKGERHG 188
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF PFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 194
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 195 NGQWLGRRTIRTNWA 209
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ N + + TLYVG L V+E ++ F G + K D A + FV FL+
Sbjct: 36 LGNGSDEPRTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGAND---PYAFVEFLDH 92
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYAL 86
A QA+ M+ L R + VN+A+
Sbjct: 93 SQASQALQTMNKRLLLDREMKVNWAV 118
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSM 243
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 244 DGEWLGSRAIRCNWA 258
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 8 KNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
K LYVGGL V E IL F G ++ VK D+ + K ++GFV + + A +AM
Sbjct: 91 KRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNS-KGLNYGFVEYDDPGAAERAM 149
Query: 68 DNMDGAELYGRVLTVNYAL 86
++G ++ + VN+A
Sbjct: 150 QTLNGRRVHQSEIRVNWAY 168
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 310 NGFELAGRPMRVGH-VTERLDGG 331
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D + K R +GF++F ++EDA QA++ M
Sbjct: 109 VFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQAINTM 168
Query: 71 DGAELYGRVLTVNYALPERIKGGEQGWAAQPIW 103
+G L R + VN+A ++ + G G + P +
Sbjct: 169 NGEWLGSRAIRVNWAN-QKTQTGSSGAYSSPSY 200
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L V +A L F +G + D++ Q R + FV + A+ AM
Sbjct: 251 TLFVGNLGPYVTQAELTPLFQTYGYVTDIR------MQADRGYAFVKLDTSQAAVSAMAT 304
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGWA 98
+ + GR L + + + + + GW
Sbjct: 305 LQNTMVQGRPLKIQWGREKPAEAAQAGWG 333
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHM 174
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 175 GGQWLGGRQIRTNWA 189
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQK---------------HRS 51
Q TLYVG L+ +V E ++ F G K K+ +Q + +
Sbjct: 6 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANNDP 65
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ FV F E DA A+ M+G ++ G+ + VN+A
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 99
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 25 LHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNY 84
LH+AF +G++ + K LD+ TQ+ R FGFVTF +E A++ M+G EL GR +TVN
Sbjct: 3 LHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNE 62
Query: 85 A 85
A
Sbjct: 63 A 63
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA + L AAF +G+I + K D+ T + R FGFVTF ++ A++ M
Sbjct: 10 CFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGM 69
Query: 71 DGAELYGRVLTVNYALPER 89
+G EL GR +TVN A R
Sbjct: 70 NGKELDGRNITVNEAQSRR 88
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 310 NGFELAGRPMRVGH-VTERLDGG 331
>gi|170060753|ref|XP_001865940.1| RNA-binding motif protein [Culex quinquefasciatus]
gi|167879121|gb|EDS42504.1| RNA-binding motif protein [Culex quinquefasciatus]
Length = 137
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VGGL E+ E L A F +G+I ++ D+ T K + FGF+ F ++ + +DN+
Sbjct: 36 IFVGGLPSELTEGDLLAVFSQYGEIVNINLVRDRKTGKSKGFGFICFEDQRSTVLTVDNL 95
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR L V++
Sbjct: 96 NGIKLLGRTLRVDHV 110
>gi|427708129|ref|YP_007050506.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
gi|427360634|gb|AFY43356.1| RNP-1 like RNA-binding protein [Nostoc sp. PCC 7107]
Length = 99
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L+ EA L A F +G++K V P D+ T + R F FV E A+
Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMEEDAQENAAITE 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRQLRVNKAKP 79
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 1 MANLAVQKNT-----LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFV 55
MAN +QK T LYVG L + E +L F PFG I+ ++ +D T + + +GF+
Sbjct: 239 MAN-NLQKGTAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFI 297
Query: 56 TFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
TF + E A +A++ ++G EL GR + V +
Sbjct: 298 TFSDSECAKKALEQLNGFELAGRPMKVGHV 327
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ ++ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 98 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 157
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 158 AGQWLQGRQIRTNWA 172
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V E ++ F G K K D + + FV F++ +DA A
Sbjct: 9 TLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSD--PYCFVEFVDHKDAASARAT 66
Query: 70 MDGAELYGRVLTVNYA 85
M+ ++ G+ + VN+A
Sbjct: 67 MNKRKILGKEVKVNWA 82
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F + A A+ +
Sbjct: 205 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVS 258
Query: 70 MDGAELYGRVL 80
++G + G ++
Sbjct: 259 VNGTVIEGNLV 269
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + + + D T + R +GFV F E+ DA +A+ +M
Sbjct: 190 IFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSM 249
Query: 71 DGAELYGRVLTVNYA 85
DG L R + N+A
Sbjct: 250 DGEWLGSRAIRCNWA 264
>gi|403308137|ref|XP_003944528.1| PREDICTED: cold-inducible RNA-binding protein isoform 1 [Saimiri
boliviensis boliviensis]
gi|403308139|ref|XP_003944529.1| PREDICTED: cold-inducible RNA-binding protein isoform 2 [Saimiri
boliviensis boliviensis]
Length = 172
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +DA
Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYA--LPERIKGGEQGWAA 99
AM M+G + GR + V+ A P+ G +G +A
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQAGKSPDSRSRGYRGGSA 98
>gi|195014784|ref|XP_001984080.1| GH15204 [Drosophila grimshawi]
gi|193897562|gb|EDV96428.1| GH15204 [Drosophila grimshawi]
Length = 643
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 134 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 193
Query: 71 DGAELYGRVLTV 82
+GA + GR + V
Sbjct: 194 NGALMGGRNIKV 205
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YV + +++E + + F FG I K + H+ +GF+ + K+ +A+
Sbjct: 229 NRIYVASIHPDLSEDDIKSVFEAFGPILYCKLAQGSSVHTHKGYGFIEYANKQAMDEAIA 288
Query: 69 NMDGAELYGRVLTVNYAL 86
+M+ +L G++L V ++
Sbjct: 289 SMNLFDLGGQLLRVGRSI 306
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ +D T + + +GF+TF + E A +A++ +
Sbjct: 258 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 317
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 318 NGFELTGRPMKVGHV 332
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 50/77 (64%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
NTL++GGLA + E + AF FG++ V+ P + + + + FG+V F+ +++A +A++
Sbjct: 495 NTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKALE 554
Query: 69 NMDGAELYGRVLTVNYA 85
M+G L GR + +++A
Sbjct: 555 TMNGQALGGRPIRIDFA 571
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L+ V+ L + F +G + D + D+ + + R FG+V F +A++A
Sbjct: 395 TLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDSGRSRGFGYVDFATSAEALRASKE 454
Query: 70 MDGAELYGRVLTVN 83
G EL GR L V+
Sbjct: 455 AHGKELDGRALRVD 468
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 175 GGQWLGGRQIRTNWA 189
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 212 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 265
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 266 HESAAHAIVSVNGTTIEGHVVKCYWG 291
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ------------ATQKHRS--- 51
Q TLYVG L+ +V E ++ F G K K +Q + +H S
Sbjct: 6 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDP 65
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ FV F E DA A+ M+G ++ G+ + VN+A
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 99
>gi|425461431|ref|ZP_18840909.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
gi|389825716|emb|CCI24327.1| putative RNA-binding protein rbpB [Microcystis aeruginosa PCC
9808]
Length = 100
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+YVG L +V L F +G + V P+D+ T K R FGFV E+ A++
Sbjct: 2 TIYVGNLVYDVTTEALQEVFAEYGTVSRVYLPVDRETGKMRGFGFVEMSSDEEEAIAIET 61
Query: 70 MDGAELYGRVLTVNYALPE 88
+DGAE GR + VN A P+
Sbjct: 62 LDGAEWMGRQMKVNKARPK 80
>gi|71005326|ref|XP_757329.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
gi|46096733|gb|EAK81966.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
Length = 464
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VG L+ +V++A+L + F F + DV+ D AT K R FGF+ F K+DA +
Sbjct: 133 LFVGDLSPDVDDALLQSFFSRFTSLADVRVMYDAATGKSRGFGFINFRSKQDADDCIATC 192
Query: 71 DGAELYGRVLTVNYA 85
G L GR + VN+A
Sbjct: 193 QGQWLRGRQIRVNWA 207
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ +D T + + +GF+TF + E A +A++ +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 290 NGFELTGRPMKVGHV 304
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 115 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 174
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 175 GGQWLGGRQIRTNWA 189
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 212 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 265
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 266 HESAAHAIVSVNGTTIEGHVVKCYWG 291
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHR---------------S 51
Q TLYVG L+ +V E ++ F G K K +Q R
Sbjct: 6 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTSNDP 65
Query: 52 FGFVTFLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
+ FV F E DA A+ M+G ++ G+ + VN+A
Sbjct: 66 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWA 99
>gi|410931844|ref|XP_003979305.1| PREDICTED: RNA-binding protein 39-like, partial [Takifugu rubripes]
Length = 324
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I++++ +D T + + +GF+TF + E A +A++ +
Sbjct: 144 LYVGSLHFNITEEMLRGIFEPFGRIENIQLMMDTDTGRSKGYGFITFADAECAKKALEQL 203
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 204 NGFELAGRPMKVGHV 218
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ ++ L AF FG++ D K +D+ T + R FGFV F ++
Sbjct: 28 LGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDE 87
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG +L GR + VN A
Sbjct: 88 TAASAAISEMDGKDLNGRNIRVNQA 112
>gi|148242178|ref|YP_001227335.1| RNA-binding protein [Synechococcus sp. RCC307]
gi|147850488|emb|CAK27982.1| RNA-binding protein, RRM domain [Synechococcus sp. RCC307]
Length = 84
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y+G L+ + + LH+ F +G +K PLD+ T + R FGFV + D +A+D+
Sbjct: 2 TIYIGNLSWDCEQEDLHSLFAEYGAVKKCSLPLDRETGRKRGFGFVDMASEADEQKAIDD 61
Query: 70 MDGAELYGRVLTVNYALP 87
+ E GR + VN A P
Sbjct: 62 LQDVEWMGRYIRVNKAEP 79
>gi|428773895|ref|YP_007165683.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
gi|428688174|gb|AFZ48034.1| RNP-1 like RNA-binding protein [Cyanobacterium stanieri PCC 7202]
Length = 90
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V E L F +G +K V P+D+ T++ R FGFV + A++
Sbjct: 2 SIYVGNLSYDVTEEDLQTVFSDYGQVKRVYLPVDRETKRMRGFGFVEMSSDSEEETAIET 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQ 95
+DGA+ GR + VN A P R +GG +
Sbjct: 62 LDGAQWMGRQMKVNKAKP-REEGGNR 86
>gi|426376374|ref|XP_004054976.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Gorilla
gorilla gorilla]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 231 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 290
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 291 NGFELAGRPMRVGH-VTERLDGG 312
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF PFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 165 NGQWLGRRTIRTNWA 179
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EVN+ +L AF FG + D + D + K R +GF+ F +K DA QA+ M
Sbjct: 110 VFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 169
Query: 71 DGAELYGRVLTVNYA 85
+G L R + VN+A
Sbjct: 170 NGEWLGSRAIRVNWA 184
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKH-RSFGFVTFLEKEDAIQAMDN 69
LYVG L+ V E +L F G ++ VK D+ Q ++GFV +++ A A+
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 70 MDGAELYGRVLTVNYA 85
++G +++ + VN+A
Sbjct: 79 LNGRKIFDTEIRVNWA 94
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 137 GGQWLGGRQIRTNWA 151
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + + FV F
Sbjct: 174 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFST 227
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 228 HESAAHAIVSVNGTTIEGHVVKCYWG 253
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ ++ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 100 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 159
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 160 AGQWLQGRQIRTNWA 174
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V E ++ F G K K D + + FV F++ +DA A
Sbjct: 11 TLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSD--PYCFVEFVDHKDAASARAT 68
Query: 70 MDGAELYGRVLTVNYA 85
M+ ++ G+ + VN+A
Sbjct: 69 MNKRKILGKEVKVNWA 84
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F + A A+ +
Sbjct: 207 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVS 260
Query: 70 MDGAELYGRVL 80
++G + G ++
Sbjct: 261 VNGTVIEGNLV 271
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 180 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 239
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 240 GGQWLGGRQIRTNWA 254
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 277 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 330
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 331 HESAAHAIVSVNGTTIEGHVVKCYWG 356
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
YVG L+ +V E ++ F G K K + + + + FV F E DA A+ M
Sbjct: 92 CYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAALAAM 149
Query: 71 DGAELYGRVLTVNYA 85
+G ++ G+ + VN+A
Sbjct: 150 NGRKILGKEVKVNWA 164
>gi|195375406|ref|XP_002046492.1| GJ12466 [Drosophila virilis]
gi|194153650|gb|EDW68834.1| GJ12466 [Drosophila virilis]
Length = 645
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+YVG ++ E+ E + AAF PFG IK + D TQKH+ F FV + E A A++ M
Sbjct: 145 VYVGSISFELKEDTIRAAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 204
Query: 71 DGAELYGRVLTV 82
+GA + GR + V
Sbjct: 205 NGALMGGRNIKV 216
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N +YV + +++E + + F FG I K + H+ +GF+ + K+ +A+
Sbjct: 240 NRIYVASIHPDLSEDDIKSVFEAFGPILYCKLAQGTSVHTHKGYGFIEYANKQAMDEAIA 299
Query: 69 NMDGAELYGRVLTVNYAL 86
+M+ +L G++L V ++
Sbjct: 300 SMNLFDLGGQLLRVGRSI 317
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E++ L AF+PFG++ + K D T K + +GFV++ +EDA +A++ M
Sbjct: 134 VFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQM 193
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 194 NGQWLGRRTIRTNWA 208
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TL+VG L V + + F G + K D + F+ F + A QA+ +
Sbjct: 39 TLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGLAD-PYAFIEFSDHNQAAQALQS 97
Query: 70 MDGAELYGRVLTVNYAL 86
M+G +L R L VN+A+
Sbjct: 98 MNGRQLLDRELRVNWAV 114
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 201 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 260
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 261 GGQWLGGRQIRTNWA 275
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 298 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 351
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 352 HESAAHAIVSVNGTTIEGHVVKCYWG 377
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNMD 71
YVG L+ +V E ++ F G K K + + + FV F E DA A+ M+
Sbjct: 114 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSND--PYCFVEFYEHRDAAAALAAMN 171
Query: 72 GAELYGRVLTVNYA 85
G ++ G+ + VN+A
Sbjct: 172 GRKILGKEVKVNWA 185
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ +L + L+VGGL+ ++ L AF FG++ D K +D+ T + R FGFV F ++
Sbjct: 27 LGSLRLMSTKLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDE 86
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYA 85
A A+ MDG +L GR + VN A
Sbjct: 87 GAASAAISEMDGKDLNGRNIRVNVA 111
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 9 NTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMD 68
N L+VG L+ +EA L++ F +G + D K D+ + + R FGFVT A A++
Sbjct: 140 NKLFVGNLSWGCDEAALYSFFSEYGTVVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIE 199
Query: 69 NMDGAELYGRVLTVNYA 85
N+DGAEL GR L VN A
Sbjct: 200 NLDGAELDGRRLRVNLA 216
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + A L G + V+ D+ + + R F FVT EDA ++ +
Sbjct: 46 LYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKISGRSRGFAFVTMATPEDAQAVINAL 105
Query: 71 DGAELYGRVLTVNY 84
DG ++ GR L VNY
Sbjct: 106 DGTDMGGRPLKVNY 119
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ +D T + + +GF+TF + E A +A++ +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 312 NGFELAGRPMKVGHV 326
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ ++ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 122 VFVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKM 181
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 182 AGQWLQGRQIRTNWA 196
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
T+Y GG+ + E ++ F PFG I +++ D + + FV F + A A+ +
Sbjct: 229 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFPD------KGYSFVRFSSHDSAAHAIVS 282
Query: 70 MDGAELYGRVL 80
++G + G ++
Sbjct: 283 VNGTVIEGNLV 293
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
L+VGGL+ V++ L AF FGD+ + + D+ T K R FGFV + + A A+ M
Sbjct: 39 LFVGGLSWGVDDMKLREAFSGFGDVTEARVITDRDTGKSRGFGFVNYTSSDAANAAISGM 98
Query: 71 DGAELYGRVLTVNYA 85
DG E+ GR + VN A
Sbjct: 99 DGKEIDGRPVRVNIA 113
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + FGF+TF + E A +A++ +
Sbjct: 259 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 318
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 319 NGFELAGRPMRVGH-VTERLDGG 340
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 43/75 (57%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + AAF PFG I D + D AT K + +GFV+F K DA A+ M
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 156
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 157 GGQWLGGRQIRTNWA 171
Score = 41.6 bits (96), Expect = 0.13, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
TLYVG L+ +V EA++ F G K+ K +D T + + FV F E A A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFSEHRHAAAALAA 65
Query: 70 MDGAELYGRVLTVNYA 85
M+G ++ G+ + VN+A
Sbjct: 66 MNGRKIMGKEVKVNWA 81
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 105 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 164
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 165 GGQWLGGRQIRTNWA 179
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 202 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 255
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 256 HESAAHAIVSVNGTTIEGHVVKCYWG 281
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 15/89 (16%)
Query: 12 YVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQ------------ATQKHRS---FGFVT 56
YVG L+ +V E ++ F G K K +Q + +H S + FV
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 57 FLEKEDAIQAMDNMDGAELYGRVLTVNYA 85
F E DA A+ M+G ++ G+ + VN+A
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWA 89
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I+ ++ +D T + + +GF+TF + E A +A++ +
Sbjct: 301 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 360
Query: 71 DGAELYGRVLTVNYA 85
+G EL GR + V +
Sbjct: 361 NGFELAGRPMKVGHV 375
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 98 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 157
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 158 GGQWLGGRQIRTNWA 172
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 7 QKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQA 66
Q TLYVG L+ +V E ++ F G K K + + + + FV F E DA A
Sbjct: 6 QPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTS--NDPYCFVEFYEHRDAAAA 63
Query: 67 MDNMDGAELYGRVLTVNYA 85
+ M+G ++ G+ + VN+A
Sbjct: 64 LAAMNGRKILGKEVKVNWA 82
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 195 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 248
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 249 HESAAHAIVSVNGTTIEGHVVKCYWG 274
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 309 NGFELAGRPMRVGH-VTERLDGG 330
>gi|86607801|ref|YP_476563.1| RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556343|gb|ABD01300.1| putative RNA-binding protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 107
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V EA L A F +G +K V+ P D+ T + R FGFV + + A+
Sbjct: 2 SIYVGNLSFKVTEADLTAVFAEYGSVKRVQIPTDRETGRIRGFGFVEMSSEAEEQAAIAA 61
Query: 70 MDGAELYGRVLTVNYALP 87
+DGAE GR L VN A P
Sbjct: 62 LDGAEWMGRDLKVNKARP 79
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 232 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 291
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 292 NGFELAGRPMRVGH-VTERLDGG 313
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
+VGGLA ++ L AF FG+I D K D+ T + R FGFVTF ++ A++ M
Sbjct: 8 CFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEGM 67
Query: 71 DGAELYGRVLTVNYA 85
+G +L GR +TVN A
Sbjct: 68 NGKDLDGRNITVNEA 82
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ E+ + +AF PFG I D + D AT K + +GFV+F K DA A+ +M
Sbjct: 77 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHM 136
Query: 71 DGAELYGRVLTVNYA 85
G L GR + N+A
Sbjct: 137 GGQWLGGRQIRTNWA 151
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 1 MANLAVQKN-TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLE 59
+ N + KN T+Y GG+A + + ++ F PFG I +++ + + FV F
Sbjct: 174 VVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIR------VFPEKGYSFVRFST 227
Query: 60 KEDAIQAMDNMDGAELYGRVLTVNYA 85
E A A+ +++G + G V+ +
Sbjct: 228 HESAAHAIVSVNGTTIEGHVVKCYWG 253
>gi|330847369|gb|AEC46650.1| cold inducible RNA binding protein transcript variant 2 [Sus
scrofa]
Length = 182
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 4 LAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63
+A + L+VGGL+ + NE L F +G I +V D+ TQ+ R FGFVTF +DA
Sbjct: 1 MASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRDFGFVTFENIDDA 60
Query: 64 IQAMDNMDGAELYGRVLTVNYA 85
AM M+G + GR + V+ A
Sbjct: 61 KDAMMAMNGKSVDGRQIRVDQA 82
>gi|221487552|gb|EEE25784.1| splicing factor protein, putative [Toxoplasma gondii GT1]
Length = 633
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 11 LYVGGLAE---EVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+YVGGL + ++ E L F PFG I +V+ P D T R +GFVT+ DA +AM
Sbjct: 326 VYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAM 385
Query: 68 DNMDGAELYGRVLTVNYA 85
+M+ EL G+ L V YA
Sbjct: 386 QHMNNFELLGQQLRVGYA 403
>gi|237830355|ref|XP_002364475.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|211962139|gb|EEA97334.1| splicing factor protein, putative [Toxoplasma gondii ME49]
gi|221507345|gb|EEE32949.1| splicing factor protein, putative [Toxoplasma gondii VEG]
Length = 633
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 11 LYVGGLAE---EVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAM 67
+YVGGL + ++ E L F PFG I +V+ P D T R +GFVT+ DA +AM
Sbjct: 326 VYVGGLVDNLAKIQEEDLRVLFGPFGRINEVEIPKDANTGGLRGYGFVTYASAADAHEAM 385
Query: 68 DNMDGAELYGRVLTVNYA 85
+M+ EL G+ L V YA
Sbjct: 386 QHMNNFELLGQQLRVGYA 403
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Query: 1 MANLAVQKNT----LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVT 56
M NL + T LYVG L + E +L + F PFG I +++ +D T + + +GF+
Sbjct: 250 MPNLMPKNMTGPMRLYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIA 309
Query: 57 FLEKEDAIQAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADAD 107
F EDA +A++ ++G EL GR + V + ER+ +QG P D+D
Sbjct: 310 FRNCEDAKKALEQLNGFELAGRPMKVG-NVTERLDLQQQG----PSILDSD 355
>gi|156086728|ref|XP_001610772.1| Ser/Arg-rich splicing factor [Babesia bovis T2Bo]
gi|154798025|gb|EDO07204.1| Ser/Arg-rich splicing factor, putative [Babesia bovis]
Length = 188
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 41/73 (56%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
+L V L E + L AAF FG+I+DV PLD T+K R FGFV F DA +AM
Sbjct: 13 SLLVRNLKYETSPDQLRAAFSRFGEIRDVYLPLDYYTRKPRGFGFVEFFSHSDADEAMRE 72
Query: 70 MDGAELYGRVLTV 82
M G EL G + V
Sbjct: 73 MFGYELDGNKIEV 85
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
++VG L+ EV+ L AF PFGD+ D K D T K + +GFV++ ++E+A +A++ M
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 71 DGAELYGRVLTVNYA 85
+G L R + N+A
Sbjct: 197 NGQWLGRRTIRTNWA 211
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
Query: 1 MANLAVQKNTLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEK 60
+ N + + TLYVG L V E + F G + K D + + FV F +
Sbjct: 38 LGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDP---YAFVEFSDH 94
Query: 61 EDAIQAMDNMDGAELYGRVLTVNYAL 86
A QA+ M+ L R + VN+A+
Sbjct: 95 GQASQALQTMNKRLLLDREMKVNWAV 120
>gi|345804022|ref|XP_003435135.1| PREDICTED: probable RNA-binding protein 23 [Canis lupus familiaris]
Length = 411
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 11 LYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDNM 70
LYVG L + E +L F PFG I ++ D T + + +GF+TF + E A +A++ +
Sbjct: 232 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 291
Query: 71 DGAELYGRVLTVNYALPERIKGG 93
+G EL GR + V + + ER+ GG
Sbjct: 292 NGFELAGRPMRVGH-VTERLDGG 313
>gi|282900575|ref|ZP_06308517.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
gi|281194375|gb|EFA69330.1| RNA-binding region protein RNP-1 [Cylindrospermopsis raciborskii
CS-505]
Length = 103
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 10 TLYVGGLAEEVNEAILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDAIQAMDN 69
++YVG L+ +V L +AF +G++ V+ P D+ T + R FGFV + + A+D
Sbjct: 2 SIYVGNLSYDVTLEDLKSAFSKYGNVSKVQLPTDKETGRPRGFGFVDMSSEAEENAAIDA 61
Query: 70 MDGAELYGRVLTVNYALPERIKGGEQGW 97
++GAE GR L VN A P + + W
Sbjct: 62 LNGAEWMGRQLKVNKARPREERSSQGTW 89
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.127 0.358
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,648,037,209
Number of Sequences: 23463169
Number of extensions: 105205802
Number of successful extensions: 777457
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14846
Number of HSP's successfully gapped in prelim test: 6147
Number of HSP's that attempted gapping in prelim test: 722961
Number of HSP's gapped (non-prelim): 54589
length of query: 174
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 42
effective length of database: 9,262,057,059
effective search space: 389006396478
effective search space used: 389006396478
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 71 (32.0 bits)