Your job contains 1 sequence.
>030634
MEFSQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINE
AISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTN
ELYQKSLEVSTKAPELHMELHKHGINQQTLGGGSSASSAQVNFCICVHQMKMAF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 030634
(174 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015904 - symbol:TOM20-2 "AT1G27390" species:3... 460 1.3e-43 1
TAIR|locus:2092045 - symbol:TOM20-3 "AT3G27080" species:3... 447 3.2e-42 1
TAIR|locus:2167737 - symbol:TOM20-4 "AT5G40930" species:3... 401 2.4e-37 1
>TAIR|locus:2015904 [details] [associations]
symbol:TOM20-2 "AT1G27390" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM;IEA;IDA]
[GO:0045040 "protein import into mitochondrial outer membrane"
evidence=IEA] [GO:0005742 "mitochondrial outer membrane translocase
complex" evidence=IDA] [GO:0005744 "mitochondrial inner membrane
presequence translocase complex" evidence=TAS] [GO:0006626 "protein
targeting to mitochondrion" evidence=RCA;IMP;TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=TAS] [GO:0046872 "metal ion binding"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] InterPro:IPR010547
InterPro:IPR011990 Pfam:PF06552 PROSITE:PS50005 PROSITE:PS50293
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006626
GO:GO:0046872 Gene3D:1.25.40.10 GO:GO:0005744 EMBL:AC004557
GO:GO:0022626 GO:GO:0045040 GO:GO:0005742 GO:GO:0015450
EMBL:AJ296024 EMBL:AK228213 EMBL:BT024602 IPI:IPI00520696
PIR:D86399 RefSeq:NP_174059.2 UniGene:At.10325 UniGene:At.71052
ProteinModelPortal:P82873 SMR:P82873 IntAct:P82873
MINT:MINT-4330409 STRING:P82873 PaxDb:P82873 PRIDE:P82873
EnsemblPlants:AT1G27390.1 GeneID:839629 KEGG:ath:AT1G27390
GeneFarm:2097 TAIR:At1g27390 eggNOG:NOG240270 HOGENOM:HOG000005870
InParanoid:P82873 OMA:WIGMAKS PhylomeDB:P82873
ProtClustDB:CLSN2684989 Genevestigator:P82873 GermOnline:AT1G27390
Uniprot:P82873
Length = 210
Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
Identities = 86/153 (56%), Positives = 113/153 (73%)
Query: 1 MEFSQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINE 60
MEFS +DF+RL++ EH RK +EA Y DPLD++NL +WG ALLELSQF+ + ++K ++N+
Sbjct: 1 MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLND 60
Query: 61 AISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTN 120
AISK EEAL I+P KH LW + NA+T+ F D EAK FDKA+E FQRA +E+P N
Sbjct: 61 AISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGN 120
Query: 121 ELYQKSLEVSTKAPELHMELHKHGINQQTLGGG 153
+ Y+KSL+ S KAPELHM+ G+ QQ LGGG
Sbjct: 121 DTYRKSLDSSLKAPELHMQFMNQGMGQQILGGG 153
>TAIR|locus:2092045 [details] [associations]
symbol:TOM20-3 "AT3G27080" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0045040
"protein import into mitochondrial outer membrane" evidence=IEA]
[GO:0005742 "mitochondrial outer membrane translocase complex"
evidence=IDA] [GO:0005744 "mitochondrial inner membrane presequence
translocase complex" evidence=TAS] [GO:0006626 "protein targeting
to mitochondrion" evidence=RCA;IMP;TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=IDA;TAS] [GO:0005741 "mitochondrial outer
membrane" evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
InterPro:IPR010547 InterPro:IPR011990 Pfam:PF06552 PROSITE:PS50005
PROSITE:PS50293 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006626 Gene3D:1.25.40.10
GO:GO:0005744 EMBL:AB026649 GO:GO:0045040 GO:GO:0005742
GO:GO:0015450 eggNOG:NOG240270 HOGENOM:HOG000005870
ProtClustDB:CLSN2684989 EMBL:AJ296025 EMBL:AY040027 EMBL:AY079411
EMBL:AY087037 IPI:IPI00528881 RefSeq:NP_189344.1 UniGene:At.6114
PDB:1ZU2 PDBsum:1ZU2 ProteinModelPortal:P82874 SMR:P82874
IntAct:P82874 STRING:P82874 PaxDb:P82874 PRIDE:P82874
EnsemblPlants:AT3G27080.1 GeneID:822326 KEGG:ath:AT3G27080
GeneFarm:2106 TAIR:At3g27080 InParanoid:P82874 OMA:WISFAKA
PhylomeDB:P82874 EvolutionaryTrace:P82874 Genevestigator:P82874
GermOnline:AT3G27080 Uniprot:P82874
Length = 202
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 85/148 (57%), Positives = 113/148 (76%)
Query: 4 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAIS 63
++++FDR+LL E R+ AE Y +PLDADNLTRWG LLELSQF S+SD+K++I EAI+
Sbjct: 3 TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAIT 62
Query: 64 KFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELY 123
KFEEAL+IDP K +W +GNA+TS FLT D +EAK +FD A++ FQ+AVDE+P N Y
Sbjct: 63 KFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 122
Query: 124 QKSLEVSTKAPELHMELHKHGINQQTLG 151
KSLE++ KAP+LH E +K G+ Q +G
Sbjct: 123 LKSLEMTAKAPQLHAEAYKQGLGSQPMG 150
>TAIR|locus:2167737 [details] [associations]
symbol:TOM20-4 "AT5G40930" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=ISM;IEA] [GO:0005742
"mitochondrial outer membrane translocase complex" evidence=IDA]
[GO:0005744 "mitochondrial inner membrane presequence translocase
complex" evidence=TAS] [GO:0006626 "protein targeting to
mitochondrion" evidence=RCA;IMP;TAS] [GO:0015450
"P-P-bond-hydrolysis-driven protein transmembrane transporter
activity" evidence=TAS] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000278 "mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA
processing" evidence=RCA] InterPro:IPR010547 InterPro:IPR011990
Pfam:PF06552 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0016021
GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006626
Gene3D:1.25.40.10 GO:GO:0005744 EMBL:AB023040 GO:GO:0045040
GO:GO:0005742 GO:GO:0015450 HOGENOM:HOG000005870
ProtClustDB:CLSN2684989 EMBL:AF462861 EMBL:AY141998 EMBL:AK117822
IPI:IPI00540141 RefSeq:NP_198909.1 UniGene:At.28254
ProteinModelPortal:P82805 SMR:P82805 IntAct:P82805 STRING:P82805
PaxDb:P82805 PRIDE:P82805 EnsemblPlants:AT5G40930.1 GeneID:834094
KEGG:ath:AT5G40930 GeneFarm:2107 TAIR:At5g40930 eggNOG:NOG289162
InParanoid:P82805 OMA:KKHDALW PhylomeDB:P82805
Genevestigator:P82805 GermOnline:AT5G40930 Uniprot:P82805
Length = 187
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 79/133 (59%), Positives = 105/133 (78%)
Query: 5 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISK 64
Q++ +RL++ EH RK AEA Y K+PLDA+NLTRW ALLELSQF++ + K++I EAI K
Sbjct: 4 QNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQT--EPKQMILEAILK 61
Query: 65 FEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQ 124
EALVIDP KH LW +GNAH S GFL++D +EA +F+KAS+ FQ AV+E+P +ELY+
Sbjct: 62 LGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYR 121
Query: 125 KSLEVSTKAPELH 137
KSL +++KAPELH
Sbjct: 122 KSLTLASKAPELH 134
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.367 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 174 174 0.00075 109 3 11 23 0.44 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 596 (63 KB)
Total size of DFA: 160 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.66u 0.07s 18.73t Elapsed: 00:00:01
Total cpu time: 18.66u 0.07s 18.73t Elapsed: 00:00:01
Start: Sat May 11 08:29:45 2013 End: Sat May 11 08:29:46 2013