BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030634
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92792|TOM20_SOLTU Mitochondrial import receptor subunit TOM20 OS=Solanum tuberosum
GN=TOM20 PE=1 SV=1
Length = 204
Score = 206 bits (523), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 95/148 (64%), Positives = 121/148 (81%)
Query: 5 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISK 64
QS+FDRLL EH RK+AE YA++PLDADNLTRWG ALLELSQF+ V++SK++I++A SK
Sbjct: 4 QSEFDRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSK 63
Query: 65 FEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQ 124
EEAL ++P KH LW LGNAHTS FLT D+ EAK F+KA++CFQ+A D +P+N+LY+
Sbjct: 64 LEEALTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYFEKATQCFQQAFDADPSNDLYR 123
Query: 125 KSLEVSTKAPELHMELHKHGINQQTLGG 152
KSLEV+ KAPELHME+H+HG QQT+
Sbjct: 124 KSLEVTAKAPELHMEIHRHGPMQQTMAA 151
>sp|P82874|TO203_ARATH Mitochondrial import receptor subunit TOM20-3 OS=Arabidopsis
thaliana GN=TOM20-3 PE=1 SV=1
Length = 202
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 113/148 (76%)
Query: 4 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAIS 63
++++FDR+LL E R+ AE Y +PLDADNLTRWG LLELSQF S+SD+K++I EAI+
Sbjct: 3 TETEFDRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAIT 62
Query: 64 KFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELY 123
KFEEAL+IDP K +W +GNA+TS FLT D +EAK +FD A++ FQ+AVDE+P N Y
Sbjct: 63 KFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHY 122
Query: 124 QKSLEVSTKAPELHMELHKHGINQQTLG 151
KSLE++ KAP+LH E +K G+ Q +G
Sbjct: 123 LKSLEMTAKAPQLHAEAYKQGLGSQPMG 150
>sp|P82873|TO202_ARATH Mitochondrial import receptor subunit TOM20-2 OS=Arabidopsis
thaliana GN=TOM20-2 PE=1 SV=2
Length = 210
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 110/150 (73%)
Query: 1 MEFSQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINE 60
MEFS +DF+RL++ EH RK +EA Y DPLD++NL +WG ALLELSQF+ + ++K ++N+
Sbjct: 1 MEFSTADFERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLND 60
Query: 61 AISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTN 120
AISK EEAL I+P KH LW + NA+T+ F D EAK FDKA+E FQRA +E+P N
Sbjct: 61 AISKLEEALTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHFDKATEYFQRAENEDPGN 120
Query: 121 ELYQKSLEVSTKAPELHMELHKHGINQQTL 150
+ Y+KSL+ S KAPELHM+ G+ QQ L
Sbjct: 121 DTYRKSLDSSLKAPELHMQFMNQGMGQQIL 150
>sp|P82805|TO204_ARATH Mitochondrial import receptor subunit TOM20-4 OS=Arabidopsis
thaliana GN=TOM20-4 PE=1 SV=1
Length = 187
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 105/133 (78%), Gaps = 2/133 (1%)
Query: 5 QSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISK 64
Q++ +RL++ EH RK AEA Y K+PLDA+NLTRW ALLELSQF++ + K++I EAI K
Sbjct: 4 QNENERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQT--EPKQMILEAILK 61
Query: 65 FEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQ 124
EALVIDP KH LW +GNAH S GFL++D +EA +F+KAS+ FQ AV+E+P +ELY+
Sbjct: 62 LGEALVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNFEKASQFFQLAVEEQPESELYR 121
Query: 125 KSLEVSTKAPELH 137
KSL +++KAPELH
Sbjct: 122 KSLTLASKAPELH 134
>sp|A2WYG9|TOM20_ORYSI Probable mitochondrial import receptor subunit TOM20 OS=Oryza
sativa subsp. indica GN=TOM20 PE=2 SV=2
Length = 201
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 100/140 (71%)
Query: 4 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAIS 63
+ SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A S
Sbjct: 5 AMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAES 64
Query: 64 KFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELY 123
K EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY
Sbjct: 65 KLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLY 124
Query: 124 QKSLEVSTKAPELHMELHKH 143
+KSL++S+KAPELHME+H+
Sbjct: 125 RKSLDLSSKAPELHMEIHRQ 144
>sp|Q5JJI4|TOM20_ORYSJ Probable mitochondrial import receptor subunit TOM20 OS=Oryza
sativa subsp. japonica GN=TOM20 PE=2 SV=1
Length = 202
Score = 151 bits (381), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 100/140 (71%)
Query: 4 SQSDFDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAIS 63
+ SD +R+ + + A+ Y ++P DADNLTRWG ALLELSQ + +S K + +A S
Sbjct: 5 AMSDPERMFFFDLACQNAKVTYEQNPHDADNLTRWGGALLELSQMRNGPESLKCLEDAES 64
Query: 64 KFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELY 123
K EEAL IDP K LW LGNA TS GF T+D +A F+KA++CFQ+AVD EP N+LY
Sbjct: 65 KLEEALKIDPMKADALWCLGNAQTSHGFFTSDTVKANEFFEKATQCFQKAVDVEPANDLY 124
Query: 124 QKSLEVSTKAPELHMELHKH 143
+KSL++S+KAPELHME+H+
Sbjct: 125 RKSLDLSSKAPELHMEIHRQ 144
>sp|P82872|TO201_ARATH Mitochondrial import receptor subunit TOM20-1 OS=Arabidopsis
thaliana GN=TOM20-1 PE=1 SV=1
Length = 188
Score = 143 bits (361), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/145 (51%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
Query: 8 FDRLLLSEHNRKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEE 67
D+L E RK AE Y +P DADNL RWGEALLELSQF++V DS K+I +AISK E+
Sbjct: 1 MDKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLED 60
Query: 68 ALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSL 127
A++IDP KH +W LGNA+TS LT D ++A+ +F A F AV ++P N++Y KSL
Sbjct: 61 AILIDPMKHDAVWCLGNAYTSYARLTPDDTQARLNFGLAYLFFGIAVAQQPDNQVYHKSL 120
Query: 128 EVSTKAPELHMELHKHGINQQTLGG 152
E++ KAP+LH HK+ + LGG
Sbjct: 121 EMADKAPQLHTGFHKNRL-LSLLGG 144
>sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo sapiens GN=TTC28 PE=1
SV=4
Length = 2481
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 80 WSLGNAHTSCGFLTADLSEAKGDFDKASEC 109
WSLGN S G++ DL AK D+ EC
Sbjct: 245 WSLGNTEKSTGYMQQDLDVAKTLGDQTGEC 274
>sp|O34384|YCEE_BACSU Uncharacterized protein YceE OS=Bacillus subtilis (strain 168)
GN=yceE PE=3 SV=1
Length = 192
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 102 DFDKASECFQRAVDEEPTNELYQKSL--EVSTKAPELHMELHKHGINQQTLGGGSSASSA 159
+F + S F R VDEE NEL + L + S + + EL++HG + GS S
Sbjct: 121 NFGQVSNAFVRVVDEETQNELLRFDLGEDFSIETAVVVCELYRHGGEWKFNAIGSGFSGG 180
Query: 160 QVNFC 164
C
Sbjct: 181 LAALC 185
>sp|Q8LP10|SPY_EUSER Probable UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase SPINDLY OS=Eustoma
exaltatum subsp. russellianum GN=SPY PE=2 SV=1
Length = 918
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 11/60 (18%)
Query: 60 EAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPT 119
E I K+ EA+ IDP HY +C L SE +D A C++RA E PT
Sbjct: 156 EGIQKYYEAVKIDP--HYA--------PACYNLGVVYSEMM-QYDVALSCYERAATESPT 204
>sp|A9IVW5|HUTH_BART1 Histidine ammonia-lyase OS=Bartonella tribocorum (strain CIP 105476
/ IBS 506) GN=hutH PE=3 SV=1
Length = 512
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 61 AISKFEEALVIDPAKHYTLWSL--GNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEP 118
+IS+ AL++DPA Y L + NA + GF+ A+++ A + + +VD P
Sbjct: 349 SISQRRIALMVDPAVSYGLPAFLAHNAGLNSGFMIAEVTAAALMSENKQMAYPASVDSTP 408
Query: 119 TN 120
T+
Sbjct: 409 TS 410
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 33 DNLTRWGEALLE--LSQFESVSDSKKIINEAI----SKFEEALVIDPAKHYTLWSLGNAH 86
DNL R L + FE K+ + + I + E V + AK+Y +W
Sbjct: 275 DNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVW------ 328
Query: 87 TSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNE 121
F A L E+ GD D+ E ++RA+ + P +
Sbjct: 329 ----FDFARLEESGGDVDRTREVYERAIAQVPPTQ 359
>sp|O82861|BCSC2_GLUXY Cellulose synthase operon protein C OS=Gluconacetobacter xylinus
GN=bcsC PE=3 SV=1
Length = 1326
Score = 31.2 bits (69), Expect = 3.3, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 1 MEFSQSDFDRL----LLSEHNRKTAEAN-YAKDPLDADNLT--RWGEALLELSQFESVSD 53
++ + D D L L+S TAEA+ Y ++ + AD T RW AL ++ +
Sbjct: 318 LQINSHDADSLGGMGLVSMRQGDTAEAHRYFEEAMAADPKTADRWRPALAGMAVSGDYAA 377
Query: 54 SKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRA 113
+++I A ++ EA K TL +T + ADL + G A + ++
Sbjct: 378 VRQLI--AAHQYTEA----KQKLATLARQPGQYTGATLMLADLQRSTGQVAAAEQEYRGI 431
Query: 114 VDEEPTNEL 122
+ EP N+L
Sbjct: 432 LSREPNNQL 440
>sp|Q8NA56|TTC29_HUMAN Tetratricopeptide repeat protein 29 OS=Homo sapiens GN=TTC29 PE=2
SV=2
Length = 475
Score = 31.2 bits (69), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 16/112 (14%)
Query: 25 YAKDPLDADN---LTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWS 81
Y K D D+ L R EA+ ++ Q S+ + EAI K+ + V ++
Sbjct: 300 YCKISTDLDDDLSLGRGYEAIAKVLQ------SQGEMTEAI-KYLKKFVKIARNNFQSLD 352
Query: 82 LGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLEVSTKA 133
L A T G D+ KG ++KASECFQ+A D T EL L TK
Sbjct: 353 LVRASTMLG----DIYNEKGYYNKASECFQQAFD--TTVELMSMPLMDETKV 398
>sp|P19450|BCSC1_GLUXY Cellulose synthase operon protein C OS=Gluconacetobacter xylinus
GN=bcsC PE=3 SV=1
Length = 1319
Score = 30.8 bits (68), Expect = 4.2, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 18 RKTAEANYAKDPLDADNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHY 77
R+ E A DP AD RW AL ++ + +++I A ++ EA +
Sbjct: 345 RRYFEEAMAADPKTAD---RWRPALAGMAVSGEYASVRQLI--AAHQYTEA----KQQLA 395
Query: 78 TLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNEL 122
TL +T + ADL + G A + ++ + EP N+L
Sbjct: 396 TLARQPGQYTGATLMLADLQRSTGQIAAAEQEYRGILSREPNNQL 440
>sp|Q76E23|IF4G_ARATH Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana
GN=EIF4G PE=1 SV=2
Length = 1727
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 61 AISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTN 120
A K +E VI AKH TL G L +E G D + AV ++ ++
Sbjct: 725 ASDKLDERSVISDAKHETL---------SGVLEKAQNEVDGATDVCPVSEKLAVTDDTSS 775
Query: 121 ELYQKSLEVSTKAPELHMELHKHGINQQTLGGGSSASSAQV 161
+L + +S+ P H E HK + T S+ ++
Sbjct: 776 DLPHSTHVLSSTVPLGHSETHKSAVETNTRRNTSTKGKKKI 816
>sp|O14879|IFIT3_HUMAN Interferon-induced protein with tetratricopeptide repeats 3 OS=Homo
sapiens GN=IFIT3 PE=1 SV=1
Length = 490
Score = 30.4 bits (67), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 94 ADLSEAKGDFDKASECFQRAVDEEPTN 120
A KGD DKA E FQR ++ P N
Sbjct: 248 AKFYRRKGDLDKAIELFQRVLESTPNN 274
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 30.4 bits (67), Expect = 6.8, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 17/113 (15%)
Query: 13 LSEHNRKTAEANYAKDPLDADNLTRWGEALLELS-QF---ESVSDSKKIINEAISKFEEA 68
L E+ R A YA D L +A QF E V D I+++ ++EE
Sbjct: 256 LKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDV--ILSKRRVQYEEQ 313
Query: 69 LVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNE 121
L +P ++Y +W F A L E GD D+ + ++RA+ + P ++
Sbjct: 314 LKENP-RNYDVW----------FDFARLEETSGDPDRVRDIYERAIAQIPPSQ 355
>sp|A5A6J9|IFIT3_PANTR Interferon-induced protein with tetratricopeptide repeats 3 OS=Pan
troglodytes GN=IFIT3 PE=2 SV=1
Length = 490
Score = 30.0 bits (66), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 94 ADLSEAKGDFDKASECFQRAVDEEPTN 120
A KGD DKA E FQR ++ P N
Sbjct: 248 AKFYRRKGDLDKAIELFQRVLESTPNN 274
>sp|O67178|Y1088_AQUAE Uncharacterized protein aq_1088 OS=Aquifex aeolicus (strain VF5)
GN=aq_1088 PE=3 SV=1
Length = 761
Score = 30.0 bits (66), Expect = 7.1, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 11/65 (16%)
Query: 54 SKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRA 113
S+ + EA +E AL ++P K L++LG H + KG+ +KA + F+RA
Sbjct: 115 SQGKLEEAQHYWERALSLNPNKVEILYNLGVLHLN-----------KGELEKALDLFERA 163
Query: 114 VDEEP 118
+ +P
Sbjct: 164 LRLKP 168
>sp|Q54VG4|SGT_DICDI Small glutamine-rich tetratricopeptide repeat-containing protein
OS=Dictyostelium discoideum GN=sgt PE=1 SV=1
Length = 334
Score = 30.0 bits (66), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 11/60 (18%)
Query: 67 EALVIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNELYQKS 126
EA+ +P +G+A+TS G F +A E + +A++ EP NE ++ S
Sbjct: 204 EAIKRNPNYGKAYTRMGSAYTSLG-----------KFSEAMEAYNKAIELEPNNETFKAS 252
>sp|Q9D706|RPAP3_MOUSE RNA polymerase II-associated protein 3 OS=Mus musculus GN=Rpap3
PE=1 SV=1
Length = 660
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 15 EHNRKTAEANYAKDPLDADNLTRWGE-----ALLELSQFESVSDSKKIINEAISKFEEAL 69
E +RKT E N K+ + + + W + L EL + +S DS +++ E+ +
Sbjct: 72 ESSRKTKEEN-TKNRIKSYDYDAWAKLDVDRILDELDKEDSTHDS---LSQESESDEDGI 127
Query: 70 VIDPAKHYTLWSLGNAHTSCGFLTADLSEAKGDFDKASECFQRAVDEEPTNEL 122
+D K L GN + +G +D+A EC+ + +D +P N +
Sbjct: 128 RVDSQKALVLKEKGNKYFK-----------QGKYDEAIECYTKGMDADPYNPV 169
>sp|Q4A600|ATPF_MYCS5 ATP synthase subunit b OS=Mycoplasma synoviae (strain 53) GN=atpF
PE=3 SV=2
Length = 193
Score = 30.0 bits (66), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 11/96 (11%)
Query: 33 DNLTRWGEALLELSQFESVSDSKKIINEAISKFEEALVIDPAKHYTLWSLGNAHTSCGFL 92
D+L + +A EL ES S I+N A SK +E L Y ++ +A+
Sbjct: 84 DSLAKLSQAQAEL--IESHKQSVNIVNNAKSKAQEILA-----SYKNKAISDANRLIEET 136
Query: 93 TADLSEAKGDFDKASECFQRAVDEEPTNELYQKSLE 128
DL+E K +FDK S R + E E+ Q+ L+
Sbjct: 137 QIDLNERKKEFDKNS----RILIAETATEIAQRILK 168
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,793,588
Number of Sequences: 539616
Number of extensions: 2136558
Number of successful extensions: 5615
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5585
Number of HSP's gapped (non-prelim): 53
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)