Query 030635
Match_columns 174
No_of_seqs 156 out of 1242
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 16:44:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030635.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030635hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02547 dUTP pyrophosphatase 100.0 8.9E-49 1.9E-53 308.5 17.8 152 13-174 3-154 (157)
2 PHA03094 dUTPase; Provisional 100.0 3.2E-48 6.9E-53 301.4 17.1 139 36-174 5-143 (144)
3 PHA02703 ORF007 dUTPase; Provi 100.0 4.6E-47 1E-51 300.9 16.6 139 36-174 13-151 (165)
4 COG0756 Dut dUTPase [Nucleotid 100.0 1.3E-46 2.8E-51 291.4 15.5 136 39-174 9-147 (148)
5 TIGR00576 dut deoxyuridine 5'- 100.0 3.4E-46 7.4E-51 289.0 16.4 138 37-174 1-141 (141)
6 PRK00601 dut deoxyuridine 5'-t 100.0 1.3E-45 2.8E-50 288.5 16.5 138 37-174 8-149 (150)
7 PTZ00143 deoxyuridine 5'-triph 100.0 2E-44 4.4E-49 283.1 15.4 137 37-174 3-154 (155)
8 PRK13956 dut deoxyuridine 5'-t 100.0 1.1E-42 2.4E-47 271.1 14.0 134 36-174 6-147 (147)
9 PF00692 dUTPase: dUTPase; In 100.0 3.6E-39 7.8E-44 244.7 11.5 128 45-173 2-129 (129)
10 KOG3370 dUTPase [Nucleotide tr 100.0 3.2E-39 6.9E-44 245.7 7.3 139 36-174 2-140 (140)
11 PHA03124 dUTPase; Provisional 100.0 9.4E-36 2E-40 258.3 14.3 133 38-174 267-418 (418)
12 PHA03123 dUTPase; Provisional 100.0 3.3E-31 7.2E-36 230.8 14.8 128 42-174 232-401 (402)
13 PHA03126 dUTPase; Provisional 100.0 2.2E-31 4.8E-36 227.8 12.6 125 45-174 168-326 (326)
14 PHA03130 dUTPase; Provisional 100.0 8.6E-31 1.9E-35 225.5 13.1 126 43-174 202-368 (368)
15 PHA03127 dUTPase; Provisional 100.0 2.7E-30 5.9E-35 222.0 13.7 117 55-174 173-322 (322)
16 PHA03129 dUTPase; Provisional 100.0 4.9E-29 1.1E-33 219.8 13.4 124 46-174 279-436 (436)
17 PHA03131 dUTPase; Provisional 100.0 3.4E-28 7.3E-33 207.5 13.7 98 46-149 124-222 (286)
18 cd07557 trimeric_dUTPase Trime 100.0 5.1E-28 1.1E-32 173.1 9.6 88 57-145 1-92 (92)
19 PHA03131 dUTPase; Provisional 99.9 5.1E-25 1.1E-29 188.0 14.9 126 33-164 4-129 (286)
20 PHA01707 dut 2'-deoxyuridine 5 99.9 4.9E-24 1.1E-28 168.0 11.5 94 56-151 29-137 (158)
21 TIGR02274 dCTP_deam deoxycytid 99.9 2.1E-23 4.6E-28 167.0 13.4 89 64-153 68-158 (179)
22 PRK00416 dcd deoxycytidine tri 99.9 9.8E-22 2.1E-26 157.2 13.5 87 64-151 68-154 (177)
23 COG0717 Dcd Deoxycytidine deam 99.8 1.1E-20 2.3E-25 152.2 12.4 128 21-150 27-157 (183)
24 PRK02253 deoxyuridine 5'-triph 99.8 7.4E-20 1.6E-24 145.3 10.1 85 65-151 70-154 (167)
25 PHA03129 dUTPase; Provisional 99.8 5.4E-19 1.2E-23 156.4 8.5 77 74-154 77-159 (436)
26 PRK07559 2'-deoxycytidine 5'-t 99.7 2.5E-16 5.5E-21 138.5 9.9 84 64-149 79-170 (365)
27 PHA03127 dUTPase; Provisional 99.5 7.3E-14 1.6E-18 120.7 9.1 75 74-149 63-138 (322)
28 PHA03128 dUTPase; Provisional 99.4 2.1E-12 4.5E-17 112.4 10.7 94 46-147 203-297 (376)
29 PRK07559 2'-deoxycytidine 5'-t 99.4 1.5E-12 3.2E-17 114.8 8.8 83 65-151 246-338 (365)
30 PHA03128 dUTPase; Provisional 99.3 7.3E-11 1.6E-15 102.8 12.4 127 34-169 86-212 (376)
31 PHA03125 dUTPase; Provisional 99.2 1.6E-10 3.5E-15 100.5 9.8 87 58-148 255-342 (376)
32 PF06559 DCD: 2'-deoxycytidine 99.1 1.3E-10 2.9E-15 100.8 7.9 83 65-149 79-169 (364)
33 PHA03125 dUTPase; Provisional 98.9 1.4E-08 3.1E-13 88.4 12.5 101 56-161 150-250 (376)
34 PHA03126 dUTPase; Provisional 98.7 1.4E-07 3.1E-12 81.7 9.7 80 75-156 54-150 (326)
35 PHA03123 dUTPase; Provisional 97.4 0.00071 1.5E-08 60.2 8.5 76 74-151 85-163 (402)
36 PHA03130 dUTPase; Provisional 97.2 0.0015 3.2E-08 57.5 7.8 74 74-151 59-133 (368)
37 PF04797 Herpes_ORF11: Herpesv 97.1 0.0091 2E-07 53.1 12.2 103 39-147 246-351 (379)
38 PF06559 DCD: 2'-deoxycytidine 97.0 0.0031 6.7E-08 55.5 7.9 84 66-152 247-339 (364)
39 PF05784 Herpes_UL82_83: Betah 96.7 0.00043 9.4E-09 61.1 0.0 88 54-148 256-343 (348)
40 PHA03365 hypothetical protein; 93.8 0.72 1.6E-05 41.8 10.1 102 41-149 269-373 (419)
41 PF06284 Cytomega_UL84: Cytome 87.0 5.4 0.00012 36.6 9.1 85 55-149 372-456 (530)
42 PF05784 Herpes_UL82_83: Betah 65.6 2 4.4E-05 38.1 0.0 75 61-135 13-92 (348)
43 PHA03124 dUTPase; Provisional 60.0 45 0.00099 30.2 7.4 75 75-150 46-132 (418)
44 PF09160 FimH_man-bind: FimH, 58.8 23 0.00051 27.8 4.8 95 57-151 13-135 (147)
45 PF04489 DUF570: Protein of un 52.0 1.8E+02 0.0039 26.7 9.9 86 53-145 341-428 (429)
46 PF06030 DUF916: Bacterial pro 37.8 36 0.00078 25.5 2.9 29 65-95 85-114 (121)
47 cd00235 TLP-20 Telokin-like pr 37.4 72 0.0016 23.8 4.3 27 117-145 80-106 (108)
48 COG1124 DppF ABC-type dipeptid 36.0 26 0.00057 29.8 2.0 68 79-149 24-92 (252)
49 PF03712 Cu2_monoox_C: Copper 31.0 2.5E+02 0.0054 21.6 6.8 18 130-147 85-102 (156)
50 PF00818 Ice_nucleation: Ice n 29.9 24 0.00052 17.5 0.5 6 168-173 1-6 (16)
51 PRK13274 mdoG glucan biosynthe 29.6 3.2E+02 0.0069 25.8 8.2 78 67-170 227-318 (516)
52 COG4148 ModC ABC-type molybdat 27.1 87 0.0019 27.8 3.8 66 82-149 18-86 (352)
53 COG2430 Uncharacterized conser 24.1 2.9E+02 0.0063 23.4 6.2 22 114-135 142-163 (236)
54 COG4525 TauB ABC-type taurine 23.6 51 0.0011 27.8 1.7 40 82-122 25-64 (259)
55 PF04254 DUF432: Protein of un 22.7 3.3E+02 0.0073 20.4 6.1 23 112-135 88-110 (123)
56 PF01629 DUF22: Domain of unkn 22.6 1.2E+02 0.0027 22.6 3.5 38 56-94 36-73 (112)
57 PF05726 Pirin_C: Pirin C-term 22.4 2.9E+02 0.0063 19.5 5.3 64 66-146 3-68 (104)
58 PF06088 TLP-20: Nucleopolyhed 21.8 1.6E+02 0.0034 23.7 4.1 28 118-147 81-108 (169)
59 PHA02762 hypothetical protein; 21.2 2.5E+02 0.0055 18.5 4.2 37 111-149 4-49 (62)
No 1
>PLN02547 dUTP pyrophosphatase
Probab=100.00 E-value=8.9e-49 Score=308.52 Aligned_cols=152 Identities=85% Similarity=1.266 Sum_probs=144.5
Q ss_pred ccCCCCcccceeccCccccCCcceEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEE
Q 030635 13 VKEPSAKIPKLHQNGVEHDNTSSLLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAH 92 (174)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~ 92 (174)
|.+|.+|+.| ..+.++|++++++|.+|+|+|++||||||++++|++|+|+++++|+||+++++|+||+|+
T Consensus 3 ~~~~~~~~~~----------~~~~i~vk~l~~~a~lP~r~t~g~AG~DL~~~~d~~i~P~~~~li~tgi~v~iP~g~~g~ 72 (157)
T PLN02547 3 VQEPPPKIQK----------PSPLLRVKKLSEKATLPSRGSALAAGYDLSSAYDTVVPARGKALVPTDLSIAIPEGTYAR 72 (157)
T ss_pred ccCCCccccC----------CCceEEEEEeCCCCCCCCcCCCCccCeeEecCCCeEECCCCEEEEEeceEEEcCCCeEEE
Confidence 5678888765 234699999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCc
Q 030635 93 IAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGST 172 (174)
Q Consensus 93 i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGST 172 (174)
|++||||++|++|.+.+|+||+||+|||++.|.|++++++.|++|+|||||||.++..+++++|++|++|+||+||||||
T Consensus 73 i~~RSgla~k~gi~~~~GvID~~Y~Gei~v~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGST 152 (157)
T PLN02547 73 IAPRSGLAWKHSIDVGAGVIDADYRGPVGVILFNHSDVDFEVKVGDRIAQLILEKIVTPEVVEVEDLDATVRGAGGFGST 152 (157)
T ss_pred EEccccccccCcEecCCceECCCCCCceEEEEEeCCCCCEEEcCCCEEEEEEEEEeeeccEEEecccCcccccCCCcCcC
Confidence 99999999888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CC
Q 030635 173 GV 174 (174)
Q Consensus 173 G~ 174 (174)
|+
T Consensus 153 G~ 154 (157)
T PLN02547 153 GV 154 (157)
T ss_pred cc
Confidence 95
No 2
>PHA03094 dUTPase; Provisional
Probab=100.00 E-value=3.2e-48 Score=301.44 Aligned_cols=139 Identities=52% Similarity=0.861 Sum_probs=135.9
Q ss_pred eEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCC
Q 030635 36 LLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDAD 115 (174)
Q Consensus 36 ~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~g 115 (174)
.+++++++++|.+|+|++++||||||+++++++|+|++.++|+||+++++|+||+++|++|||+++|+||.+.+|+||+|
T Consensus 5 ~~~~~~l~~~a~~P~~~~~~~aG~Dl~a~~~~~i~P~~~~lv~Tg~~i~ip~g~~g~i~~RSsla~k~Gl~v~~GvID~g 84 (144)
T PHA03094 5 PVRCVKLSNFAKIPTRSSPKSAGYDLYSAYDYTVPPKERILVKTDISLSIPKFCYGRIAPRSGLSLNYGIDIGGGVIDED 84 (144)
T ss_pred eEEEEEcCCCCCCCCcCCCCcccEEEecCCCeEECCCCEEEEEcCeEEEcCCCEEEEEEccccccccCCeeecCceECCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999888998899999999
Q ss_pred CCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 116 YRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 116 Y~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
|+|||++.|.|+++.++.|++|+|||||||.++..++++++++|++|+||+|||||||+
T Consensus 85 YrGei~v~l~N~~~~~~~I~~G~RIaQlvf~~~~~~~~~~v~~l~~t~Rg~~GFGSTG~ 143 (144)
T PHA03094 85 YRGNIGVIFINNGKCTFNIKTGDRIAQIIFERIEYPELKEVQSLDSTDRGDQGFGSSGL 143 (144)
T ss_pred CCCceEEEEEECCCCCeEECCCCEEEEEEEEEcccCcEEEecccCcccccCCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999995
No 3
>PHA02703 ORF007 dUTPase; Provisional
Probab=100.00 E-value=4.6e-47 Score=300.86 Aligned_cols=139 Identities=63% Similarity=0.931 Sum_probs=135.5
Q ss_pred eEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCC
Q 030635 36 LLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDAD 115 (174)
Q Consensus 36 ~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~g 115 (174)
.|+|+++++++.+|+|+|++||||||++++|++|+|+++++|+||++++||+||++++++|||+++|.+|.+..|+||+|
T Consensus 13 ~i~v~~l~~~a~lP~~at~g~AGyDL~a~~d~vi~P~~~~lv~TGi~i~iP~g~~g~i~~RSsla~kg~i~v~~GvID~g 92 (165)
T PHA02703 13 ALRVVRLSPNATIPTRGSPGAAGLDLCSACDCIVPAGCRCVVFTDLLIKLPDGCYGRIAPRSGLAVKHFIDVGAGVIDAD 92 (165)
T ss_pred EEEEEEeCCCCCCCCCCCCCCcCccEecCCCeEECCCCEEEEeCCeEEEcCCCeEEEEECCccchhcCCEecccceECCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999887788899999999
Q ss_pred CCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 116 YRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 116 Y~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
|+|||++.|.|++++++.|++|+|||||||.++..+++++|++|++|+||++||||||.
T Consensus 93 YrGei~v~l~N~~~~~~~I~~G~RIaQLVf~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 151 (165)
T PHA02703 93 YRGNVGVVLFNFGHNDFEVKKGDRIAQLICERAAFPAVEEVACLDDTDRGAGGFGSTGS 151 (165)
T ss_pred CcCceEEEEEECCCCCEEeCCCCEEEEEEEEEcccceEEEecccccCcCCCCCCCcCCC
Confidence 99999999999999999999999999999999999999999999999999999999995
No 4
>COG0756 Dut dUTPase [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=291.39 Aligned_cols=136 Identities=49% Similarity=0.814 Sum_probs=131.8
Q ss_pred EEEccCCCCCCCCcCCCceeeeEEcCcc-eEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec--cceEEcCC
Q 030635 39 VKKLSEKAVLPKRGSPLAAGYDLSSSTE-TKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV--GAGVIDAD 115 (174)
Q Consensus 39 v~~l~~~a~lP~~~~~~dAG~DL~~~~~-~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v--~~GvID~g 115 (174)
.+++.+.+.+|+|+|+++|||||++.++ ++|.|+++.+|+||++++||+|++++++|||+|++|+||.+ ++|+||+|
T Consensus 9 ~~~~~~~~~lP~y~t~gsAG~DLrA~~~~~~i~pg~~~LVpTGl~~~ip~g~~~~v~PRSgla~k~Gi~~~Ns~G~IDsD 88 (148)
T COG0756 9 DKRLNEGAPLPKYATEGSAGYDLRAAEDEVTIAPGERKLVPTGLAIELPEGYEAQVRPRSGLALKHGITLGNSPGTIDSD 88 (148)
T ss_pred EeecCCCCcCCeeecCCccceeeecccceeEECCCCeEEecCCEEEEcCCCcEEEEeccccCceeceEEEecCCceECCC
Confidence 6788889999999999999999999999 89999999999999999999999999999999999999875 69999999
Q ss_pred CCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 116 YRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 116 Y~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
|||||++.|+|+++++|+|++||||||+||.|+..+++.+++++++|+||+|||||||+
T Consensus 89 YrGei~V~l~N~~~~~f~ie~GdRIaQ~V~~~v~~~~~~~v~~~~~t~rg~GGFGSTG~ 147 (148)
T COG0756 89 YRGEIKVLLINLGDEDFVIEKGDRIAQLVFVKVLQAEFDEVENLDETERGTGGFGSTGV 147 (148)
T ss_pred CCceEEEEEEeCCCCCEEecCCCEEEEEEEEEEEecceeeeecccccccccCCCCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999995
No 5
>TIGR00576 dut deoxyuridine 5'-triphosphate nucleotidohydrolase (dut). Changed role from 132 to 123. RTD
Probab=100.00 E-value=3.4e-46 Score=288.96 Aligned_cols=138 Identities=57% Similarity=0.928 Sum_probs=132.9
Q ss_pred EEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccce--eccceEEcC
Q 030635 37 LRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSM--DVGAGVIDA 114 (174)
Q Consensus 37 l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl--~v~~GvID~ 114 (174)
|++++++++|.+|+|++++||||||++++|++|+|+++++|+|++++.+|+||+++|++|||+++|.|| .+++|+||+
T Consensus 1 ~~~~~~~~~a~~P~~~~~~~aGyDl~~~~d~~i~P~~~~lv~tg~~v~ip~g~~~~i~~RSsl~~k~gi~v~~~~GvID~ 80 (141)
T TIGR00576 1 LKFVKLSENAPLPTYATEGAAGYDLYAAEDVTIPPGERALVPTGIAIELPDGYYGRVAPRSGLALKHGVTIDNSPGVIDS 80 (141)
T ss_pred CeEEEcCCCCCCCCCCCCCccCeeEecCCCeEECCCCEEEEEeCcEEecCCCEEEEEEecccCcccCCEEEeecCceECC
Confidence 589999999999999999999999999999999999999999999999999999999999999988884 567999999
Q ss_pred CCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeecc-CcEEEeccCCCCcCCCCCCCCcCC
Q 030635 115 DYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVT-PDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 115 gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~-~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
||+|||++.++|+++.++.|++|+|||||||.++.. +++++++++++|+||++||||||+
T Consensus 81 gy~Gei~v~l~N~~~~~~~i~~G~rIaQlV~~~~~~~~~~~~~~~~~~t~RG~~gfGSTg~ 141 (141)
T TIGR00576 81 DYRGEIKVILINLGKEDFTVKKGDRIAQLVVEKIVTVPEFEEVEELDETERGEGGFGSTGV 141 (141)
T ss_pred CCCCceeEEEEeCCCCCEEEcCCCEEEEEEEEeccccccEEEeCccCCccccCCCCCCCCC
Confidence 999999999999999999999999999999999988 789999999999999999999996
No 6
>PRK00601 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=1.3e-45 Score=288.46 Aligned_cols=138 Identities=43% Similarity=0.678 Sum_probs=133.5
Q ss_pred EEEEEccCCCCCCCCcCCCceeeeEEcCc--ceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec--cceEE
Q 030635 37 LRVKKLSEKAVLPKRGSPLAAGYDLSSST--ETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV--GAGVI 112 (174)
Q Consensus 37 l~v~~l~~~a~lP~~~~~~dAG~DL~~~~--~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v--~~GvI 112 (174)
++++++.+++.+|+|++++||||||++++ +++|+|+++++|+||+++.+|+||+++|++|||+++|+||.+ ++|+|
T Consensus 8 ~~~~~~~~~~~~P~~~~~~daG~Dl~~~~~~~i~i~P~~~~lv~tg~~v~~p~~~~~~i~~RSsla~k~Gl~v~~~~GvI 87 (150)
T PRK00601 8 ILDPRLGKEFPLPAYATEGSAGLDLRACLDEPVTLAPGERALVPTGLAIHIPDGYEAQILPRSGLAHKHGIVLGNLPGTI 87 (150)
T ss_pred EEEEEcCCCCCCCccCCCCCcCEeEEecCCCCCEECCCCeEEEEcCEEEECCCCeEEEEEeCCcccccCCEEEecCccee
Confidence 89999999999999999999999999987 899999999999999999999999999999999998888865 69999
Q ss_pred cCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 113 DADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 113 D~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
|+||+|||++.|+|.++.++.|++|+|||||+|.++..+++++|++|++|+||+|||||||.
T Consensus 88 D~gy~Gei~i~l~N~~~~~v~I~~G~rIaQlv~~~~~~~~~~~~~~l~~t~RG~~gFGSTG~ 149 (150)
T PRK00601 88 DSDYRGELKVSLWNRGQEPFTIEPGERIAQLVIVPVVQAEFEEVEEFDETERGAGGFGSTGR 149 (150)
T ss_pred CCCCCCceEEEEEeCCCCCEEECCCCEEEEEEEecccccceEEecccCcccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999995
No 7
>PTZ00143 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=2e-44 Score=283.05 Aligned_cols=137 Identities=30% Similarity=0.415 Sum_probs=129.7
Q ss_pred EEEEEccCCCC----CCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCC---------CeEEEEEeCCCccccc
Q 030635 37 LRVKKLSEKAV----LPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPE---------GTYAHIAPRSGLAWKH 103 (174)
Q Consensus 37 l~v~~l~~~a~----lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~---------g~~g~i~~RSsla~k~ 103 (174)
++|+++++.+. +|+|++++||||||+++++++|+|+++++|+||+++++|+ ||+++|++|||++ |+
T Consensus 3 ~~i~~~~~~~~~~~~~p~~~~~~dAG~DL~a~~~~~i~Pg~~~~V~tGi~i~~p~~~~~~~~~~g~~~~i~~RSsla-~~ 81 (155)
T PTZ00143 3 LKILPLNDEVRELYKNHKTFHEGDSGLDLFIVKDQTIKPGETAFIKLGIKAAAFQKDEDGSDGKNVSWLLFPRSSIS-KT 81 (155)
T ss_pred EEEEEcChhhhccccCCccCCCCccccCEecCCCeEECCCCEEEEECCeEEEcccccccccCCCCEEEEEEccCccc-cc
Confidence 88999987655 9999999999999999999999999999999999999986 9999999999999 55
Q ss_pred ceec--cceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 104 SMDV--GAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 104 gl~v--~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
||.+ +.|+||+||+|||++.+.|++.++++|++|+|||||||+++..+++++|+++++|+||+|||||||+
T Consensus 82 gl~l~n~~GvID~gYrGei~v~l~N~~~~~~~I~~G~RIaQlVi~~~~~~~~~~v~~l~~t~RG~gGFGSTG~ 154 (155)
T PTZ00143 82 PLRLANSIGLIDAGYRGELIAAVDNIKDEPYTIKKGDRLVQLVSFDGEPITFELVDELDETTRGEGGFGSTGR 154 (155)
T ss_pred CeEecccCCeECCCCCccEEEEEEECCCCCeEECCCCEEEEEEEEecceeeEEEeCcCCCccccCCccCCCCC
Confidence 8754 6999999999999999999999999999999999999999999999999999999999999999995
No 8
>PRK13956 dut deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=100.00 E-value=1.1e-42 Score=271.14 Aligned_cols=134 Identities=31% Similarity=0.439 Sum_probs=122.6
Q ss_pred eEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec--cceEEc
Q 030635 36 LLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV--GAGVID 113 (174)
Q Consensus 36 ~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v--~~GvID 113 (174)
+-.|.++.+.+++|+|+|++||||||+++++++|+|++.++|+||+++++|+||+++|++|||+++|+||.+ ++|+||
T Consensus 6 ~~~~~~~~~~~~lP~r~t~~sAG~DL~a~~~~~i~p~~~~lv~TGi~i~lP~g~~~~I~~RSsla~k~Gl~l~n~~GvID 85 (147)
T PRK13956 6 FELVSSFTNENLLPKRETAHAAGYDLKVAERTVIAPGEIKLVPTGVKAYMQPGEVLYLYDRSSNPRKKGLVLINSVGVID 85 (147)
T ss_pred cEEEEeccCCCCCCCcCCCCCCCcccccCCCeEECCCCEEEEECCeEEECCCCeEEEEecCchhhhhCCEEEcCcCCeEc
Confidence 446778999999999999999999999999999999999999999999999999999999999998888854 699999
Q ss_pred CCCC------cceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 114 ADYR------GPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 114 ~gY~------Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
+||| |+|++.+.|+++.+++|++|||||||||.++..+++. ..++||+|||||||+
T Consensus 86 sdYrGe~~~~G~i~v~l~N~~~~~~~I~~GdRIAQlv~~p~~~~~~~-----~~~~r~~gGFGSTG~ 147 (147)
T PRK13956 86 GDYYGNPANEGHIFAQMKNITDQEVVLEVGERIVQGVFMPFLIADGD-----QADGERTGGFGSTGK 147 (147)
T ss_pred CCCCCCCCCCcEEEEEEEeCCCCCEEECCCCEEEEEEEEEEEEcccc-----ccccccCCCCCCCCC
Confidence 9998 5699999999999999999999999999999865543 247799999999995
No 9
>PF00692 dUTPase: dUTPase; InterPro: IPR008180 Synonym(s): dUTP diphosphatase, Deoxyuridine-triphosphatase The essential enzyme dUTP pyrophosphatase (3.6.1.23 from EC) is specific for dUTP and is critical for the fidelity of DNA replication and repair. dUTPase hydrolyzes dUTP to dUMP and pyrophosphate, simultaneously reducing dUTP levels and providing the dUMP for dTTP biosynthesis. dUTPase decreases the intracellular concentration of dUPT so that uracil cannot be incorporated into DNA []. The crystal structure of human dUTPase reveals that each subunit of the dUTPase trimer folds into an eight-stranded jelly-roll beta barrel, with the C-terminal beta strands interchanged among the subunits. The structure is similar to that of the Escherichia coli enzyme, despite low sequence homology between the two enzymes []. Other enzymes like deoxycytidine triphosphate deaminase (dCTP) (3.5.4.13 from EC) that specifically bind uridine also belong to this group suggesting that the signature may recognise a putative uridine-binding motif. Some retroviruses encode dUTPases. Retroviral dUTPase is synthesised as part of POL polyprotein that contains; an aspartyl protease, a reverse transcriptase, dUTPase and RNase H. ; GO: 0016787 hydrolase activity, 0046080 dUTP metabolic process; PDB: 4DHK_A 1DUC_A 1DUN_A 3LQW_A 2BT1_A 2WE1_A 2WE0_A 2WE2_A 2BSY_A 2WE3_A ....
Probab=100.00 E-value=3.6e-39 Score=244.65 Aligned_cols=128 Identities=49% Similarity=0.801 Sum_probs=119.3
Q ss_pred CCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEE
Q 030635 45 KAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVIL 124 (174)
Q Consensus 45 ~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l 124 (174)
.+.+|++++++||||||+++++++|+|+++++|+|++.+.+|++++++|++|||++++ |+.+.+|+||+||+|+|++.+
T Consensus 2 ~~~~~~~~~~~~ag~Dl~~~~~~~i~p~~~~~v~t~~~~~~p~~~~~~i~~RSsl~~~-gl~v~~gvid~~y~G~i~i~i 80 (129)
T PF00692_consen 2 EAEIPKRARPGDAGYDLYAPEDFVIPPGETVLVPTGEEINIPPGYYALILPRSSLARK-GLIVHPGVIDPGYRGEIKIII 80 (129)
T ss_dssp TCCSBBESSTTSSSEEEE-SSSEEEETTEEEEEEEEEEEE-STTEEEEEEE-HHHHHH-TEEEETEEEETTBESEEEEEE
T ss_pred CccccCCCCCCceeEEEEcCCCEEECCCCEEEEEeCeEEECCCCcEEEEecCchHHhc-CccccCcccCCCcccceEEEE
Confidence 5789999999999999999999999999999999999999999999999999999755 888888999999999999999
Q ss_pred EcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcC
Q 030635 125 FNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTG 173 (174)
Q Consensus 125 ~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG 173 (174)
.|+++.++.|++|+|||||+|.++..+.++.++++..+.||++||||||
T Consensus 81 ~N~s~~~~~i~~G~riaQlv~~~~~~~~~~~~~~~~~~~rg~~Gfgstg 129 (129)
T PF00692_consen 81 YNHSDEPIRIEKGDRIAQLVFIPLSTPPVEPVEEFSNTERGEGGFGSTG 129 (129)
T ss_dssp EESSSSSEEEETTSEEEEEEEEEBESEEEEEESSTTTSSSTTTSTTTT-
T ss_pred EeccceeccccCCCEEEEEEEEecCccceEEccccCCccCCCCCCCCCC
Confidence 9999999999999999999999999988889999999999999999998
No 10
>KOG3370 consensus dUTPase [Nucleotide transport and metabolism]
Probab=100.00 E-value=3.2e-39 Score=245.65 Aligned_cols=139 Identities=68% Similarity=1.105 Sum_probs=136.2
Q ss_pred eEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCC
Q 030635 36 LLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDAD 115 (174)
Q Consensus 36 ~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~g 115 (174)
++.+.++++.|..|.|+..++|||||++.++..++|....+|+|++.+++|.++++.+.+||++|+|++|.+..|+||+|
T Consensus 2 ~l~~~~~s~~a~~p~Rgs~~aaGydl~sa~~~~vpa~gk~~V~td~q~~vP~g~ygRvaprsglA~k~~I~~gagvVd~d 81 (140)
T KOG3370|consen 2 MLRFAKLSESATIPTRGSAGAAGYDLYSAQDGTVPARGKAVVDTDLQIAVPSGYYGRVAPRSGLAWKHFIDVGAGVVDPD 81 (140)
T ss_pred ccchhhcchhhcccccCCccccccchhhhcccccCcccceeccccceeecCcceeeeecccccchhhccccccCceeccc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCCCcCC
Q 030635 116 YRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFGSTGV 174 (174)
Q Consensus 116 Y~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFGSTG~ 174 (174)
|+||+.+.|+|+++..|.+++|||||||++.++..+++..|+.|+.|+||++||||||+
T Consensus 82 yrgeV~v~LfN~~~~~F~~k~Gdriaqli~~~i~~~~i~~v~sLe~t~Rg~~Gfgstg~ 140 (140)
T KOG3370|consen 82 YRGEVGVLLFNHSDRDFEYKKGDRIAQLIVEKIVTPEIVLVSSLEATERGAGGFGSTGV 140 (140)
T ss_pred ccceeEEEEecCCCcceeeecCCcceeeEEEecCCCceehhhhHHHHhhhccCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999995
No 11
>PHA03124 dUTPase; Provisional
Probab=100.00 E-value=9.4e-36 Score=258.29 Aligned_cols=133 Identities=28% Similarity=0.340 Sum_probs=118.2
Q ss_pred EEEEccCCCCCCCC-----cCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec-cceE
Q 030635 38 RVKKLSEKAVLPKR-----GSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV-GAGV 111 (174)
Q Consensus 38 ~v~~l~~~a~lP~~-----~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v-~~Gv 111 (174)
......+.+.+|-+ .+++||||||+++++++|+|+++.+|+||+++.+|+||+++|++||||++| |+.+ .+|+
T Consensus 267 ~~t~~~~aa~~Pf~~~F~PKtaGDAGyDLyA~EDvvI~PGEt~lIpTGIaIeIP~G~~glI~pRSGLAlK-GILV~~~GV 345 (418)
T PHA03124 267 RDDDDCPAALFPFHDIFAPKEAEDAGYDIRAPEDCTILPGGSTRIILPQKLACGKFRAAFILGRSSMNLK-GLLVDPEHV 345 (418)
T ss_pred eccCCCcccccchhhcCCCCCCccccccCccCCCeEECCCCeEEEECCEEEecCCCeEEEEEeccccccC-CeEeCCCce
Confidence 33344445555533 567899999999999999999999999999999999999999999999999 6655 5799
Q ss_pred EcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEee--------eccCcEEEeccCCC-----CcCCCCCCCCcCC
Q 030635 112 IDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEK--------IVTPDVLEVQHLDS-----TVRGEGGFGSTGV 174 (174)
Q Consensus 112 ID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~--------~~~~~~~~v~~l~~-----t~RG~~GFGSTG~ 174 (174)
||+|| +++.++|+++++++|++|+|||||||.+ +..++|++|++|++ |+||+|||||||+
T Consensus 346 IDSDY---I~ViL~Nlsdep~tI~kGDRIAQLVIlP~r~e~l~~v~~~e~~eVeEL~e~~~~~TeRGeGGFGSTG~ 418 (418)
T PHA03124 346 QDDDW---ISFNITNIRDAAAFFHAGDRIAQLIALEDKLEFLGEPDALPWKIVNSVQDEKKNLSSRGDGGFGSSGK 418 (418)
T ss_pred ECCCc---EEEEEEECCCCCEEECCCCEEEEEEEeecccccccceeecceEEeeeccccCCCcccccCCCCCCCCC
Confidence 99999 8999999999999999999999999998 67788999999987 8999999999995
No 12
>PHA03123 dUTPase; Provisional
Probab=99.97 E-value=3.3e-31 Score=230.75 Aligned_cols=128 Identities=26% Similarity=0.315 Sum_probs=111.6
Q ss_pred ccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCC--cccCCC-CeEEEEEeCCCcccccceeccceEEcCCCCc
Q 030635 42 LSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDL--SIAIPE-GTYAHIAPRSGLAWKHSMDVGAGVIDADYRG 118 (174)
Q Consensus 42 l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi--~v~iP~-g~~g~i~~RSsla~k~gl~v~~GvID~gY~G 118 (174)
......+|+|.. ||||||+++++++|+||++.+|+||+ .+.+|. ||+++|++||||++ +||.+.+|+||+||+|
T Consensus 232 ~~~~~F~pKR~g--DAGyDL~ApeDvtI~PGEt~lV~TGI~~~i~i~~pGy~a~I~pRSGLAk-KGLiV~~GvIDsGy~G 308 (402)
T PHA03123 232 FKHTIFKPKRQE--DAGYDICAPFEITLKANEFIKITLPFIQDLDLNHPNIDAYIFGRSSKNR-IGIIVCPTAWIAGEHC 308 (402)
T ss_pred ecccccccCCCC--CccccccCCCCcEECCCCEEEEeCCccceeccCCCCEEEEEEccccccc-CCeEeCCceEcCCCcc
Confidence 344588999875 99999999999999999999999998 455654 99999999999985 4999999999999998
Q ss_pred ceEEEEEcCCCCCEEeeCCCEEEEEEEeeecc-----------------------------------CcEEEeccCC---
Q 030635 119 PVGVILFNHSDVDFEVKRGDRIAQLIIEKIVT-----------------------------------PDVLEVQHLD--- 160 (174)
Q Consensus 119 ei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~-----------------------------------~~~~~v~~l~--- 160 (174)
++.++|+++++++|++|+|||||||++... |.|.+..+|+
T Consensus 309 --~V~L~N~~~epi~IkkGDRIAQLVfm~~~~~~~~~~~~~~~~~~~fP~~~~~~~~~~~~~~p~~~P~w~fT~~fD~~A 386 (402)
T PHA03123 309 --EFYIFNATGDDIIIKPGDKIAQVLLIDHNNQSIHIHHDIINNFEAFPSAIFGKCGIEGLNSPDVYPKWHFTKMFDLIA 386 (402)
T ss_pred --EEEEEECCCCCeEeCCCCEEEEEEEEEcccccCCCCCCcccccCCCCCCCCCcccCCcccCCCCCcceEEeecccccC
Confidence 689999999999999999999999986532 2377777665
Q ss_pred -CCcCCCCCCCCcCC
Q 030635 161 -STVRGEGGFGSTGV 174 (174)
Q Consensus 161 -~t~RG~~GFGSTG~ 174 (174)
.|+||.+||||||+
T Consensus 387 ppS~Rg~~GFGSTg~ 401 (402)
T PHA03123 387 PPSDRGNKGFGSTDK 401 (402)
T ss_pred CcccccCCCCCCCCC
Confidence 79999999999996
No 13
>PHA03126 dUTPase; Provisional
Probab=99.97 E-value=2.2e-31 Score=227.78 Aligned_cols=125 Identities=26% Similarity=0.363 Sum_probs=110.6
Q ss_pred CCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCC-CCeEEEEEeCCCcccccceeccceEEcCCCCcceEEE
Q 030635 45 KAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIP-EGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVI 123 (174)
Q Consensus 45 ~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP-~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~ 123 (174)
....|+|. +||||||+++++++|+|+++++|+||+++.+| +||+++|++||||++| |+.+.+++||+|+ +|++.
T Consensus 168 ~~f~PKR~--gDAGyDL~A~edvvI~Pge~~lV~TGIai~ip~~g~~~~I~pRSGLA~K-GL~V~~g~id~Ge--eI~V~ 242 (326)
T PHA03126 168 DYFAPKRV--EDAGYDISAPTDATIEPDESHFVDLPIVFASSNPAVTPCIFGRSSMNRR-GLIVLPTRWVAGR--TCCFF 242 (326)
T ss_pred hccCCCCC--CccccCCcCCCCcEECCCCEEEEEcCeEEEcCCCCeEEEEeCccccccC-CeEecCcceecCC--eEEEE
Confidence 35678887 59999999999999999999999999999998 5999999999999988 8988899998773 79999
Q ss_pred EEcCCCCCEEeeCCCEEEEEEEeeecc-----------------------------CcEEEeccCC----CCcCCCCCCC
Q 030635 124 LFNHSDVDFEVKRGDRIAQLIIEKIVT-----------------------------PDVLEVQHLD----STVRGEGGFG 170 (174)
Q Consensus 124 l~N~~~~~~~I~~G~RIaQlV~~~~~~-----------------------------~~~~~v~~l~----~t~RG~~GFG 170 (174)
|+|+++++++|++|||||||||.+... +.|.++.+|+ .++||++|||
T Consensus 243 L~N~g~e~~~I~kGDRIAQLVIm~~~~~~~~p~~~~~~~~f~~~~~~~~~~~~~~p~~w~ft~~fd~eap~S~Rg~~GFG 322 (326)
T PHA03126 243 ILNVNKYPVSITKGQRVAQLLLTEDIDDALIPTTVNYDTPFPTYSPTGATKAPQSPVLWKFTTDFDREAPSSLRADGGFG 322 (326)
T ss_pred EEeCCCCCEEECCCCEEEEEEEcccchhhcCCCccCCCCcccccCCCccccCCCCCcceEEEeeccccCCcccccCCCCC
Confidence 999999999999999999999975421 2577777774 7999999999
Q ss_pred CcCC
Q 030635 171 STGV 174 (174)
Q Consensus 171 STG~ 174 (174)
|||.
T Consensus 323 STG~ 326 (326)
T PHA03126 323 STGL 326 (326)
T ss_pred CCCC
Confidence 9995
No 14
>PHA03130 dUTPase; Provisional
Probab=99.97 E-value=8.6e-31 Score=225.49 Aligned_cols=126 Identities=29% Similarity=0.446 Sum_probs=110.6
Q ss_pred cCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCC-CeEE-EEEeCCCcccccceeccceEEcCCCCcce
Q 030635 43 SEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPE-GTYA-HIAPRSGLAWKHSMDVGAGVIDADYRGPV 120 (174)
Q Consensus 43 ~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~-g~~g-~i~~RSsla~k~gl~v~~GvID~gY~Gei 120 (174)
.+.+.+|+|+ +||||||+++++++|+|+++++|+||+++.+|+ ++++ +|++||||++| ||.+.+|.||+ ||+
T Consensus 202 ~~~a~lPkRA--gDAGyDL~A~edVvI~PGet~lV~TGLaIeIP~~G~~g~~I~PRSGLA~K-GI~V~pG~id~---GEI 275 (368)
T PHA03130 202 EAPAFLPKRA--EDAGIDIVVHKRVEVPAGGTVVIQPSLRVLLAAGGPEAYYVLGRSSLNAR-GVLVTPTRWLP---GRQ 275 (368)
T ss_pred cCCCCCCccC--CccCccccCCCCeEECCCCEEEEcCCeEEEcCCCCceEEEEeCccchhhC-CeeecccEEcc---CCE
Confidence 4468999999 499999999999999999999999999999985 8888 99999999988 88888888875 888
Q ss_pred -EEEEEcCCCCCEEeeCCCEEEEEEEeeec----------------------------------cCcEEEeccCC----C
Q 030635 121 -GVILFNHSDVDFEVKRGDRIAQLIIEKIV----------------------------------TPDVLEVQHLD----S 161 (174)
Q Consensus 121 -~i~l~N~~~~~~~I~~G~RIaQlV~~~~~----------------------------------~~~~~~v~~l~----~ 161 (174)
++.|+|+++++++|++|||||||||..-. .|.|.+..+|+ .
T Consensus 276 ~~ViL~N~g~ep~tIekGDRIAQLVI~~~~~l~wiP~~~~~~~~~f~~y~~~~~~~~~~~~~~~~p~w~ft~~fd~eAp~ 355 (368)
T PHA03130 276 CAFSVHNITGAPVTLEAGSKVAQLLVAGSDALPWVPPDNVPGDGALRAYPRGVSPARATPAPPALPCLVFTAEFDAEAPP 355 (368)
T ss_pred EEEEEEECCCCCEEECCCCEEEEEEEeecccCceeCCCCCCCCCccccCcCCCCCCCCCCCCCCCceeeeeccccccCCc
Confidence 59999999999999999999999996321 13567777774 7
Q ss_pred CcCCCCCCCCcCC
Q 030635 162 TVRGEGGFGSTGV 174 (174)
Q Consensus 162 t~RG~~GFGSTG~ 174 (174)
++||.+||||||.
T Consensus 356 S~R~~~GFGSTGi 368 (368)
T PHA03130 356 SERGTGGFGSTGI 368 (368)
T ss_pred ccccCCCCCCCCC
Confidence 9999999999995
No 15
>PHA03127 dUTPase; Provisional
Probab=99.97 E-value=2.7e-30 Score=222.04 Aligned_cols=117 Identities=23% Similarity=0.287 Sum_probs=103.7
Q ss_pred CceeeeEEcCcceEEcCCCEEEEECCCcccC-CCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEE
Q 030635 55 LAAGYDLSSSTETKVPARGKALVPTDLSIAI-PEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFE 133 (174)
Q Consensus 55 ~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~i-P~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~ 133 (174)
+||||||+++++++|+|+++.+|++++.... +.+++++|++||||++| ||.+.+++||+|| ++++.|+|+++++++
T Consensus 173 gdAGyDL~A~edvvI~Pge~~~V~lpv~~~~~~~~~~~~I~pRSGLA~K-GIiV~~gvID~G~--ei~V~L~N~~~e~~~ 249 (322)
T PHA03127 173 EDAGYDIAMPYTAVLAPGENLHVRLPVAYAAGAHAAAPYVFGRSSLNLR-GIVVLPTAWPPGE--PCRFVIRNVTQEPVV 249 (322)
T ss_pred CCccccCcCCCCeEECCCCEEEEECCCcccCCCccceEEEEccCCcccC-CEEecCccCcCCC--eEEEEEEeCCCCCEE
Confidence 7999999999999999999999999986542 34457899999999999 9998899999887 889999999999999
Q ss_pred eeCCCEEEEEEEeee----------------------------ccCcEEEeccCC----CCcCCCCCCCCcCC
Q 030635 134 VKRGDRIAQLIIEKI----------------------------VTPDVLEVQHLD----STVRGEGGFGSTGV 174 (174)
Q Consensus 134 I~~G~RIaQlV~~~~----------------------------~~~~~~~v~~l~----~t~RG~~GFGSTG~ 174 (174)
|++|||||||||.+. ..+.|.++.+|+ +|+||++||||||.
T Consensus 250 I~kGDRIAQLVf~~~~~~~ip~~~~~~~~f~~~~~~~~~~~~~~~~~w~~t~~~~~~ap~S~Rg~~GFGSTg~ 322 (322)
T PHA03127 250 AAAGQRVAQLLLLEEPLEWLPTELNDREPFPTTPRAAPPAPMAHRLRWRFVADFAAVAPSSARGDRGFGSTGL 322 (322)
T ss_pred ECCCCEEEEEEEccccccccCCcCCCCCccccccccCCCCCCCCCCcEEEEehhcccCCcccccCCCCCCCCC
Confidence 999999999999821 125788998886 89999999999995
No 16
>PHA03129 dUTPase; Provisional
Probab=99.96 E-value=4.9e-29 Score=219.85 Aligned_cols=124 Identities=27% Similarity=0.368 Sum_probs=108.8
Q ss_pred CCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCccc-CCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEE
Q 030635 46 AVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIA-IPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVIL 124 (174)
Q Consensus 46 a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~-iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l 124 (174)
..+|+| ++||||||+++++++|+|++++.|.+.+.+. +|+|++|+|++||||++| |+.+.+|.||+| +++++.|
T Consensus 279 ~f~PKR--~gdAGyDL~A~edvvI~Pge~~~Iai~i~~~~iP~G~~g~I~pRSGLA~K-GIiVl~g~id~G--eeI~V~L 353 (436)
T PHA03129 279 TFNPKR--LEDAGYDIPAPRDIELEPLSSTTIKIQQRYNCKDSSVIPCIFGRSSMNLR-GLIVLPSRWLPN--SWLTLTI 353 (436)
T ss_pred hcCCCC--CCccccCccCCCCeEECCCCEEEEEEecccccCCCCeEEEEECccccccC-CeEeccccEeCC--CeEEEEE
Confidence 568888 5699999999999999999999998887665 799999999999999988 888888888876 4699999
Q ss_pred EcCCCCCEEeeCCCEEEEEEEeeec-----------------------------cCcEEEeccCC----CCcCCCCCCCC
Q 030635 125 FNHSDVDFEVKRGDRIAQLIIEKIV-----------------------------TPDVLEVQHLD----STVRGEGGFGS 171 (174)
Q Consensus 125 ~N~~~~~~~I~~G~RIaQlV~~~~~-----------------------------~~~~~~v~~l~----~t~RG~~GFGS 171 (174)
+|+++++++|++|||||||||.+.. .+.|.++.+|+ .++||+|||||
T Consensus 354 ~N~g~e~v~I~kGDRIAQLVIi~~~~~~~ip~~~~~~~~fP~~~~~~~p~~~~~~p~w~ft~~fd~eap~S~Rg~~GFGS 433 (436)
T PHA03129 354 CNLTEKTVFIKAGDRIAQLLLVDQDAATLIPPENNTTDCFPTVGKCSRPYVTYGEPVWRETLHFDTEAMTSERQEGGFGS 433 (436)
T ss_pred EeCCCCCeEeCCCCEEEEEEEeecccccccCCCCCCCCCCCCCCCCcCCcCCCCCcceEEEehhcccCCcccccCCCCCC
Confidence 9999999999999999999998552 03677777774 79999999999
Q ss_pred cCC
Q 030635 172 TGV 174 (174)
Q Consensus 172 TG~ 174 (174)
||+
T Consensus 434 TG~ 436 (436)
T PHA03129 434 TGI 436 (436)
T ss_pred CCC
Confidence 995
No 17
>PHA03131 dUTPase; Provisional
Probab=99.96 E-value=3.4e-28 Score=207.52 Aligned_cols=98 Identities=24% Similarity=0.262 Sum_probs=91.2
Q ss_pred CCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcc-cCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEE
Q 030635 46 AVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSI-AIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVIL 124 (174)
Q Consensus 46 a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v-~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l 124 (174)
..+|+| ++||||||+++++++|+|+++++|+||+.+ .+|++|+++|++|||+++| ||.+.++.|| +||+++.+
T Consensus 124 l~~P~~--~~dAG~DL~a~~~~~I~P~~~~~V~tg~~~~~~p~~~~~~I~~RSsla~k-Gl~v~~~~~~---~Gei~v~l 197 (286)
T PHA03131 124 LNPPQY--PDDAGFDVSLPQDLVIFPTTTFTFTLSLCCPPISPHFVPVIFGRSGLASK-GLTVKPTKWR---RSGLQLKL 197 (286)
T ss_pred cCCCCc--cccCCccEEeCCCEEECCCCEEEEeCCeEEecCCCCEEEEEEcCchhhcC-CeEEcCCeEE---CCEEEEEE
Confidence 458888 459999999999999999999999999995 9999999999999999988 9988888888 79999999
Q ss_pred EcCCCCCEEeeCCCEEEEEEEeeec
Q 030635 125 FNHSDVDFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 125 ~N~~~~~~~I~~G~RIaQlV~~~~~ 149 (174)
+|.++++++|++|+|||||||.+..
T Consensus 198 ~N~~~~~v~I~~G~RIAQlVf~~~~ 222 (286)
T PHA03131 198 YNYTDETIFLPAGSRICQVVFMHKD 222 (286)
T ss_pred EECCCCCEEECCCCEEEEEEEEecc
Confidence 9999999999999999999998664
No 18
>cd07557 trimeric_dUTPase Trimeric dUTP diphosphatases. Trimeric dUTP diphosphatases, or dUTPases, are the most common family of dUTPase, found in bacteria, eukaryotes, and archaea. They catalyze the hydrolysis of the dUTP-Mg complex (dUTP-Mg) into dUMP and pyrophosphate. This reaction is crucial for the preservation of chromosomal integrity as it removes dUTP and therefore reduces the cellular dUTP/dTTP ratio, and prevents dUTP from being incorporated into DNA. It also provides dUMP as the precursor for dTTP synthesis via the thymidylate synthase pathway. dUTPases are homotrimeric, except some monomeric viral dUTPases, which have been shown to mimic a trimer. Active sites are located at the subunit interface.
Probab=99.95 E-value=5.1e-28 Score=173.11 Aligned_cols=88 Identities=42% Similarity=0.686 Sum_probs=85.1
Q ss_pred eeeeEEcCcc---eEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccc-eEEcCCCCcceEEEEEcCCCCCE
Q 030635 57 AGYDLSSSTE---TKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGA-GVIDADYRGPVGVILFNHSDVDF 132 (174)
Q Consensus 57 AG~DL~~~~~---~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~-GvID~gY~Gei~i~l~N~~~~~~ 132 (174)
|||||+++++ ++|+|+++++++|++++.+|+++++++++|||+++ .|+.+.. |+|||||+|++++.+.|+++.++
T Consensus 1 ag~Dl~~~~~~~~~~i~P~~~~~v~t~~~i~~p~~~~~~i~~RSs~~~-~Gi~v~~~g~iD~gy~G~l~v~l~N~~~~~~ 79 (92)
T cd07557 1 AGYDLRLGEDFEGIVLPPGETVLVPTGEAIELPEGYVGLVFPRSSLAR-KGITVHNAGVIDPGYRGEITLELYNLGPEPV 79 (92)
T ss_pred CcEEEEcCCcCCCEEEcCCCEEEEEEeEEEEcCCCeEEEEEcCchhhc-CCEEecCCcccCCCCcceEEEEEEECCCCCE
Confidence 7999999999 99999999999999999999999999999999986 5999887 99999999999999999999999
Q ss_pred EeeCCCEEEEEEE
Q 030635 133 EVKRGDRIAQLII 145 (174)
Q Consensus 133 ~I~~G~RIaQlV~ 145 (174)
.|++|+|||||+|
T Consensus 80 ~i~~G~~iaQlvf 92 (92)
T cd07557 80 VIKKGDRIAQLVF 92 (92)
T ss_pred EECCCCEEEEEEC
Confidence 9999999999986
No 19
>PHA03131 dUTPase; Provisional
Probab=99.93 E-value=5.1e-25 Score=188.03 Aligned_cols=126 Identities=20% Similarity=0.254 Sum_probs=114.8
Q ss_pred CcceEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEE
Q 030635 33 TSSLLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVI 112 (174)
Q Consensus 33 ~~~~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvI 112 (174)
..+.++.++...++..|+++. .+++||++.++++|+||++.+|+||+++++|+||++++++++ .|+ |.+.+|+|
T Consensus 4 ~~~~v~y~~~~~~f~~~~~~~--~~~l~l~n~~~i~I~Pge~~lV~TGi~i~iP~g~~~~i~gla---~K~-i~~~~GvI 77 (286)
T PHA03131 4 QRPEVYYAFEPSKFLITSPAE--ESRLTLVNKTPILVRPGEPTVVPLGLYIRRPPGFAFILWGST---SKN-VTCHTGLI 77 (286)
T ss_pred cCceeEEEEcCCCcEEecccc--cCCeEEeCCCCEEECCCCEEEEeCCeEEEcCCCEEEEEeecc---cCc-EEccceeE
Confidence 346899999999999998744 789999999999999999999999999999999999999764 465 88899999
Q ss_pred cCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcC
Q 030635 113 DADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVR 164 (174)
Q Consensus 113 D~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~R 164 (174)
|+||||||++.++|+++++++|++|||+|||+++++..|.+.+++.+..-.|
T Consensus 78 DsdYrGEI~V~l~N~~~~~~~I~~Gd~~~qlv~~~~~~p~~~~v~~l~~P~~ 129 (286)
T PHA03131 78 DPGYRGELKLILLNKTKYNVTLRPGELKVSLLAFTYATPILTDDSLLNPPQY 129 (286)
T ss_pred CCCCCcceEEEEEeCCCCCEEECCCCEEEEEEEEEeecCceEeccccCCCCc
Confidence 9999999999999999999999999999999999999999999988865444
No 20
>PHA01707 dut 2'-deoxyuridine 5'-triphosphatase
Probab=99.91 E-value=4.9e-24 Score=168.02 Aligned_cols=94 Identities=27% Similarity=0.430 Sum_probs=85.5
Q ss_pred ceeeeEEc---------------CcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcce
Q 030635 56 AAGYDLSS---------------STETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPV 120 (174)
Q Consensus 56 dAG~DL~~---------------~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei 120 (174)
.++|||+. .+.++|+||+.++++|++++.+|++++|++.+|||++++ ||.+++++|||||+|++
T Consensus 29 p~s~DlrLg~~~~~~~~~~~~~~~~~~~l~Pg~~~l~~T~E~i~lP~~~~~~i~~RSslaR~-Gl~v~~~~iD~Gy~G~i 107 (158)
T PHA01707 29 ENGVDLKIGNEIVRIKENMEKEVGDEFIIYPHEHVLLTTKEYIKLPNDIIAFCNLRSTFARK-GLLIPPTIVDAGFEGQL 107 (158)
T ss_pred CceEEEEecCeEEEEecccccccCCcEEECCCCEEEEEEeEEEECCCCEEEEEECcchhhhC-CEEecceeECCCCCCEE
Confidence 46777775 346789999999999999999999999999999999955 99999999999999999
Q ss_pred EEEEEcCCCCCEEeeCCCEEEEEEEeeeccC
Q 030635 121 GVILFNHSDVDFEVKRGDRIAQLIIEKIVTP 151 (174)
Q Consensus 121 ~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~ 151 (174)
++.+.| +..++.|++|+|||||+|+++..+
T Consensus 108 ~lel~n-~~~pi~i~~G~rIaQlvf~~~~~~ 137 (158)
T PHA01707 108 TIELVG-SSIPVKLKSGERFLHLIFARTLTP 137 (158)
T ss_pred EEEEEe-CCCCEEECCCCEEEEEEEEEcccc
Confidence 999999 679999999999999999998754
No 21
>TIGR02274 dCTP_deam deoxycytidine triphosphate deaminase. Members of this family include the Escherichia coli monofunctional deoxycytidine triphosphate deaminase (dCTP deaminase) and a Methanocaldococcus jannaschii bifunctional dCTP deaminase (3.5.4.13)/dUTP diphosphatase (EC 3.6.1.23), which has the EC number 3.5.4.30 for the overall operation.
Probab=99.90 E-value=2.1e-23 Score=167.03 Aligned_cols=89 Identities=29% Similarity=0.479 Sum_probs=82.0
Q ss_pred CcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec--cceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEE
Q 030635 64 STETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV--GAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIA 141 (174)
Q Consensus 64 ~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v--~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIa 141 (174)
.++++|+||++++++|++++.+|++++|++++|||++ |.||.+ ++|+|||||+|++++.+.|+++.++.|++|+|||
T Consensus 68 ~~~~~l~Pg~~~lv~t~e~i~lP~~~~~~i~~RSsla-r~Gl~v~~~~g~iD~Gy~G~i~l~l~N~~~~~i~i~~g~rIa 146 (179)
T TIGR02274 68 GEEFVIPPGEFALATTLEYVKLPDDVVGFLEGRSSLA-RLGLFIHVTAGRIDPGFEGNITLELFNAGKLPVKLRPGMRIA 146 (179)
T ss_pred CCcEEECCCCEEEEEeceEEEcCCCeEEEEEeccccc-cCCEEecCCCCcCCcCCCCEEEEEEEeCCCCCEEECCCCEEE
Confidence 4569999999999999999999999999999999998 558865 4699999999999999999999999999999999
Q ss_pred EEEEeeeccCcE
Q 030635 142 QLIIEKIVTPDV 153 (174)
Q Consensus 142 QlV~~~~~~~~~ 153 (174)
||+|+++..+..
T Consensus 147 Qlvf~~~~~~~~ 158 (179)
T TIGR02274 147 QLVFERLSSPAE 158 (179)
T ss_pred EEEEEECccccc
Confidence 999999987643
No 22
>PRK00416 dcd deoxycytidine triphosphate deaminase; Reviewed
Probab=99.88 E-value=9.8e-22 Score=157.24 Aligned_cols=87 Identities=22% Similarity=0.305 Sum_probs=81.6
Q ss_pred CcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEE
Q 030635 64 STETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQL 143 (174)
Q Consensus 64 ~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQl 143 (174)
.+.++|+||++++++|++++.+|++++|++++|||++ |.||.+++++|||||+|++++.+.|+++.++.|++|+|||||
T Consensus 68 ~~~~~l~pg~~~lv~t~e~i~lP~~~~~~i~~RSsla-r~Gl~v~~~~iD~Gy~G~i~l~l~n~~~~~i~I~~g~rIaQl 146 (177)
T PRK00416 68 GEVFILPPGEFALARTLEYFKLPDDVVGILEGRSSLA-RLGLIVHVTAIDPGWEGHITLEFSNSGPLPVKLYPGEGIGQL 146 (177)
T ss_pred CCeEEECCCCEEEEEeeeEEECCCCeEEEEEeCchhh-cCCEEecCceECcCCcCEEEEEEEeCCCCCEEECCCCEEEEE
Confidence 3458999999999999999999999999999999998 559999889999999999999999999999999999999999
Q ss_pred EEeeeccC
Q 030635 144 IIEKIVTP 151 (174)
Q Consensus 144 V~~~~~~~ 151 (174)
+|+++..+
T Consensus 147 vf~~~~~~ 154 (177)
T PRK00416 147 LFFELSEP 154 (177)
T ss_pred EEEECCCc
Confidence 99998654
No 23
>COG0717 Dcd Deoxycytidine deaminase [Nucleotide transport and metabolism]
Probab=99.85 E-value=1.1e-20 Score=152.21 Aligned_cols=128 Identities=23% Similarity=0.273 Sum_probs=103.4
Q ss_pred cceeccCccccCCcceEEEEE-ccCCCCCCCCcCCCceeeeEEcCcc--eEEcCCCEEEEECCCcccCCCCeEEEEEeCC
Q 030635 21 PKLHQNGVEHDNTSSLLRVKK-LSEKAVLPKRGSPLAAGYDLSSSTE--TKVPARGKALVPTDLSIAIPEGTYAHIAPRS 97 (174)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~v~~-l~~~a~lP~~~~~~dAG~DL~~~~~--~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RS 97 (174)
..+.-+|+|---. ..+.+.+ .+...+-|+.....+.-.+....++ ++|+|++.+++.|.++++||++++|++.+||
T Consensus 27 ~~i~p~g~Dlrl~-~ef~vf~~~~~~~iD~~~~~~~~~~~~~~~~e~~~~il~P~~~~L~~t~E~i~iP~~v~~~~~gRS 105 (183)
T COG0717 27 YQIQPAGYDLRLG-NEFRVFRNEGAGVIDPDNPDEEDPLVEEEELEDGEFILPPGEFYLAVTLEYVEIPEDVAAFCTGRS 105 (183)
T ss_pred cccccccEEEEec-cEEEEEeccCCcEEcCCccccccccceeeeccCCcEEECCCcEEEEEEEEEEEcCcceEEEEEccC
Confidence 4555667765544 2333433 3334566765544444555555554 9999999999999999999999999999999
Q ss_pred CcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeecc
Q 030635 98 GLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVT 150 (174)
Q Consensus 98 sla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~ 150 (174)
|++ |.|+.+++|+|||||+|.+++.+.|.++.|+.|++|+|||||||.++..
T Consensus 106 Sla-R~G~~~~~~~~DpGf~G~itle~~n~~~~p~~L~~g~rI~QLvF~~l~~ 157 (183)
T COG0717 106 SLA-RLGLIVHVGVIDPGFEGRITLELVNSGPLPIRLYPGERIAQLVFLELDS 157 (183)
T ss_pred chh-hCcEEecCccCCCCcCceEEEEEEecCCCCeEEcCCCEEEEEEEEEccc
Confidence 998 6699999999999999999999999999999999999999999999884
No 24
>PRK02253 deoxyuridine 5'-triphosphate nucleotidohydrolase; Provisional
Probab=99.82 E-value=7.4e-20 Score=145.31 Aligned_cols=85 Identities=26% Similarity=0.344 Sum_probs=71.8
Q ss_pred cceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEE
Q 030635 65 TETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLI 144 (174)
Q Consensus 65 ~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV 144 (174)
+.++|+||++. +.|.+++.+|+++++++.+|||++ |.|+.+++++|||||+|.+.+.+.|.+..++.|++|+||||||
T Consensus 70 ~~~~l~pg~~l-~~t~E~v~ip~~~~~~~~~RSsl~-R~Gl~v~~~~iD~Gy~G~~~i~l~~~n~~~~~i~~G~rIaQlv 147 (167)
T PRK02253 70 GWIRLEPGIYK-VRYNEVVNIPEDHVGFAYPRSSLL-RNGCTLETAVWDAGYEGRGEGLLVVHNPHGIRLERGARIAQLV 147 (167)
T ss_pred CeEEECCCCEE-EEeeeEEECCCCcEEEEECCcHHh-hCCeEcCCccCCcCCCCCCEEEEEEeCCCCEEECCCCEEEEEE
Confidence 45789999865 568899999999999999999996 6699888999999999854444444335899999999999999
Q ss_pred EeeeccC
Q 030635 145 IEKIVTP 151 (174)
Q Consensus 145 ~~~~~~~ 151 (174)
|.++..+
T Consensus 148 f~~~~~~ 154 (167)
T PRK02253 148 FATLDHE 154 (167)
T ss_pred EEECccC
Confidence 9998765
No 25
>PHA03129 dUTPase; Provisional
Probab=99.78 E-value=5.4e-19 Score=156.42 Aligned_cols=77 Identities=25% Similarity=0.483 Sum_probs=72.5
Q ss_pred EEEEECCCcccCCCCeEEEEE------eCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEee
Q 030635 74 KALVPTDLSIAIPEGTYAHIA------PRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEK 147 (174)
Q Consensus 74 ~~lV~Tgi~v~iP~g~~g~i~------~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~ 147 (174)
..+|+||+++.+|+||+++|. |||+ +.| ||.+..|+||+||||||+++|+|+ ++++|++|+||||||+.+
T Consensus 77 ~~lV~TGlaiaiP~Gy~~~V~~~~~~~PRSG-a~k-gI~v~NGvIDSdYRGEIkviL~N~--~~~tI~~GdRIAQLVi~~ 152 (436)
T PHA03129 77 ICLLDLGVRVAVPQNYVVVLAKLTDPDPTSR-GIP-VIRVANGVIDSGYRGTIRAVLFYE--KSCTIPKNGLAIRLALVK 152 (436)
T ss_pred EEEECCceEEecCCCEEEEEEecCCCCCCcc-CcC-ceEeccccccCCCCcEEEEEEEcC--CCEEeCCCCEEEEEEEEE
Confidence 579999999999999999999 9999 989 998767999999999999999998 899999999999999999
Q ss_pred eccCcEE
Q 030635 148 IVTPDVL 154 (174)
Q Consensus 148 ~~~~~~~ 154 (174)
+..++++
T Consensus 153 v~~~~~~ 159 (436)
T PHA03129 153 LASPNIN 159 (436)
T ss_pred eeeccee
Confidence 9987764
No 26
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional
Probab=99.67 E-value=2.5e-16 Score=138.48 Aligned_cols=84 Identities=20% Similarity=0.257 Sum_probs=76.0
Q ss_pred CcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec--------cceEEcCCCCcceEEEEEcCCCCCEEee
Q 030635 64 STETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV--------GAGVIDADYRGPVGVILFNHSDVDFEVK 135 (174)
Q Consensus 64 ~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v--------~~GvID~gY~Gei~i~l~N~~~~~~~I~ 135 (174)
.+.++|+||+.++++|.+++.+|++++|++.+|||++ |.||.+ ..++|||||+|.+.+.+.| +..++.++
T Consensus 79 ~eg~vL~Pg~~yL~~t~E~v~LP~dl~a~~~~RSSlg-RlGl~i~~~a~~~~~~~~iDpGy~G~itLEi~~-~~~pI~l~ 156 (365)
T PRK07559 79 TDGAVLETGCVYIVPLLESLALPADLSASANPKSSTG-RLDVFTRVITDGAQEFDKIPAGYHGPLYAEISP-RTFPILVR 156 (365)
T ss_pred CCceEEcCCeEEEEEEEEEEeCCcceEEEEeccchhh-hCCeEEEEecccccccCccCCCccceEEEEEec-CCccEEEe
Confidence 4668999999999999999999999999999999998 668864 2489999999999999998 77899999
Q ss_pred CCCEEEEEEEeeec
Q 030635 136 RGDRIAQLIIEKIV 149 (174)
Q Consensus 136 ~G~RIaQlV~~~~~ 149 (174)
+|+|||||+|.+-.
T Consensus 157 pG~RI~QlvF~~~~ 170 (365)
T PRK07559 157 TGSRLSQIRFRRGE 170 (365)
T ss_pred CCCEEEEEEEEcCc
Confidence 99999999997543
No 27
>PHA03127 dUTPase; Provisional
Probab=99.50 E-value=7.3e-14 Score=120.70 Aligned_cols=75 Identities=21% Similarity=0.306 Sum_probs=67.2
Q ss_pred EEEEECCCcccCCCCeEEEEEe-CCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeec
Q 030635 74 KALVPTDLSIAIPEGTYAHIAP-RSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 74 ~~lV~Tgi~v~iP~g~~g~i~~-RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~ 149 (174)
+.+|+||+++.+|+||+++|.+ ||+++.|+|+.+..|+||+||||||+++++|++. ..+|.+|+-=.++.+.+..
T Consensus 63 ~~lV~tGl~i~~P~Gy~~~v~p~RSGla~k~gi~~~nG~IDsgYRGei~vil~N~~~-~~~~~pg~l~l~l~l~~~~ 138 (322)
T PHA03127 63 SRLVNLGLRAAAPGGYAILMSQMCSGQTPSRPPAVAVGIVDSGYRGILRAIVWAPPC-IETIPEAGLALRLTLARLA 138 (322)
T ss_pred EEEecCceEEecCCCEEEEEeeccCCccccCCcccccCCCCCCCCceEEEEEEeCCC-CeeecCCceEEEEEEeeee
Confidence 3689999999999999999999 9999999999998899999999999999999988 9999999666666665443
No 28
>PHA03128 dUTPase; Provisional
Probab=99.40 E-value=2.1e-12 Score=112.36 Aligned_cols=94 Identities=13% Similarity=0.118 Sum_probs=81.9
Q ss_pred CCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcce-EEEE
Q 030635 46 AVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPV-GVIL 124 (174)
Q Consensus 46 a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei-~i~l 124 (174)
...|++ +|||||++++++.|+|+.+..+.....--..+.+.++|++||+|+.| ||.+.+.+|-++ -+ .|.+
T Consensus 203 L~PP~y----~agFDL~l~~~l~I~P~~t~tv~fda~p~~~p~~~aLI~GrsgLA~k-GLlV~PtiW~~~---tlp~lki 274 (376)
T PHA03128 203 IPPPNE----HYFFGLRTRQTIIIQPGHTQTVYFDAAYVHAPGICALIVGTRQFSQS-DLIIRPTIWLPG---TVATVTV 274 (376)
T ss_pred CCCCCc----ccceEEecCCcEEECCCCcEEEEEeccCCCCCcceeEEEcCchhhhC-CcEEeeeEeCCC---CcceEEE
Confidence 345554 39999999999999999999999884444578999999999999977 899888888875 47 8999
Q ss_pred EcCCCCCEEeeCCCEEEEEEEee
Q 030635 125 FNHSDVDFEVKRGDRIAQLIIEK 147 (174)
Q Consensus 125 ~N~~~~~~~I~~G~RIaQlV~~~ 147 (174)
+|.+++.+.|++|+||||+||..
T Consensus 275 ~N~T~~Tv~i~agsrIAQVVFth 297 (376)
T PHA03128 275 VNTSSTTVCISPTTTVAKVVFTT 297 (376)
T ss_pred EeCCCceEEecCCCEEEEEEEee
Confidence 99999999999999999999963
No 29
>PRK07559 2'-deoxycytidine 5'-triphosphate deaminase; Provisional
Probab=99.38 E-value=1.5e-12 Score=114.79 Aligned_cols=83 Identities=17% Similarity=0.274 Sum_probs=74.2
Q ss_pred cceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccce-ec-cceEEcCCCC--------cceEEEEEcCCCCCEEe
Q 030635 65 TETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSM-DV-GAGVIDADYR--------GPVGVILFNHSDVDFEV 134 (174)
Q Consensus 65 ~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl-~v-~~GvID~gY~--------Gei~i~l~N~~~~~~~I 134 (174)
+.++|.|++.+++.|.+++.+|++++|++.+|||. .|. .+ ++|+|||||. |.+.+.+.| ++.|+.|
T Consensus 246 ~~~iL~Pgef~L~~t~E~v~lP~d~~a~~~~~~s~---~G~~~vh~Ag~~DpGf~~~~~~~~~g~~tLEi~~-~~~P~~L 321 (365)
T PRK07559 246 GELILDPGEFYILASREAVHVPPDYAAEMVPFDPL---VGEFRVHYAGFFDPGFGHAEAGGTGSRAVLEVRS-HEVPFIL 321 (365)
T ss_pred CcEEECCCCEEEEEEEEEEeCChhHeEEEeccCcc---eeeeeccccceECCCCCcccccCCCceEEEEEEe-CCCcEEe
Confidence 56899999999999999999999999999988872 243 35 6899999999 999999998 6789999
Q ss_pred eCCCEEEEEEEeeeccC
Q 030635 135 KRGDRIAQLIIEKIVTP 151 (174)
Q Consensus 135 ~~G~RIaQlV~~~~~~~ 151 (174)
++|+|||||+|.++..+
T Consensus 322 ~~G~ri~qlvf~~~~~~ 338 (365)
T PRK07559 322 EHGQIVGRLVYERMLER 338 (365)
T ss_pred cCCCEEEEEEEEEcCCC
Confidence 99999999999998764
No 30
>PHA03128 dUTPase; Provisional
Probab=99.26 E-value=7.3e-11 Score=102.84 Aligned_cols=127 Identities=9% Similarity=0.041 Sum_probs=108.9
Q ss_pred cceEEEEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEc
Q 030635 34 SSLLRVKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVID 113 (174)
Q Consensus 34 ~~~l~v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID 113 (174)
.+.++.|....+.+.+ + .++.+-|.....+.+.|++...+++|+++.+|+||+|+++..++- + .+.+.+|+||
T Consensus 86 ~p~V~Ykf~~S~Fi~~--q--~~srL~LtNk~iI~V~p~~~~Iv~LGI~L~iPeG~fgi~L~~~s~--~-~v~ChtgLId 158 (376)
T PHA03128 86 RPKVPYKWIPSSFIVK--Q--CHTQLAFYNKHIIWLSRERKTPTSLGISLYIPEGFFGITFYKCLD--A-QFVCMPELIE 158 (376)
T ss_pred cceeEEEeeCceEEec--c--CcceEEEEcceeEEEeCCCceEEcceeEEecCCCeEEEEEecCCC--C-CeEecccccC
Confidence 3578888888888662 2 257888999999999999999999999999999999999998885 4 6888999999
Q ss_pred CCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCC
Q 030635 114 ADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGF 169 (174)
Q Consensus 114 ~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GF 169 (174)
+||+| +++.+.|.+..++.|.+|+-=.-|.++++..|+.-++..|..-.. ..||
T Consensus 159 pGy~g-ikLiL~N~Ts~~v~L~PGeLevsI~aFpy~vPePwq~~nL~PP~y-~agF 212 (376)
T PHA03128 159 PGLQN-PQMDVVNLNYTFQAIFPGTIEGDIGVFPCFCPEPWQLMNIPPPNE-HYFF 212 (376)
T ss_pred CCCcc-eEEEEEeCCCccceecCCceEEEEEEEEccCCCccccccCCCCCc-ccce
Confidence 99999 999999999999999999999999999999998767777764333 2555
No 31
>PHA03125 dUTPase; Provisional
Probab=99.17 E-value=1.6e-10 Score=100.47 Aligned_cols=87 Identities=15% Similarity=0.184 Sum_probs=76.5
Q ss_pred eeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcce-EEEEEcCCCCCEEeeC
Q 030635 58 GYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPV-GVILFNHSDVDFEVKR 136 (174)
Q Consensus 58 G~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei-~i~l~N~~~~~~~I~~ 136 (174)
.|||++++++.|+|+.++.++.-.....|+...++|++||+|+.| ||.+.+.+|-++ -+ .|.++|.++..+.|++
T Consensus 255 ~FDL~l~r~l~I~P~~~~~~~f~~a~~CPp~~~aLI~GrsgLA~k-GLlV~PtiW~~~---tlp~lki~N~T~~Tv~i~A 330 (376)
T PHA03125 255 KFHLKTNREFIVKPNSYTIQNFDAMYVCADELKALMIPSKEILKL-GLLIETYIWNKD---TIPSIKIFNSTRKTIYIPT 330 (376)
T ss_pred ceeEeeCccEEECCCccceeeeEEEeeCCCcceeEEEcCchhhhC-CcEEeeeEeCCC---CcceEEEEecCCceEEecC
Confidence 399999999999999766666666667788889999999999977 999888888875 47 8999999999999999
Q ss_pred CCEEEEEEEeee
Q 030635 137 GDRIAQLIIEKI 148 (174)
Q Consensus 137 G~RIaQlV~~~~ 148 (174)
|+||||+||..-
T Consensus 331 gsrIAQVVFth~ 342 (376)
T PHA03125 331 GICIARIIFTCG 342 (376)
T ss_pred CCEEEEEEEEeC
Confidence 999999999643
No 32
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=99.14 E-value=1.3e-10 Score=100.83 Aligned_cols=83 Identities=20% Similarity=0.260 Sum_probs=62.8
Q ss_pred cceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccc--------eEEcCCCCcceEEEEEcCCCCCEEeeC
Q 030635 65 TETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGA--------GVIDADYRGPVGVILFNHSDVDFEVKR 136 (174)
Q Consensus 65 ~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~--------GvID~gY~Gei~i~l~N~~~~~~~I~~ 136 (174)
+..+|+||+.++++|-+++.+|.+..|...+|||++ |.+|.+.. ..||+||.|.|.+.+.| ..-++.+++
T Consensus 79 ~GaVLE~GcVYlvpl~EsL~LP~di~A~anpKSStG-RLdlftRvitd~~~~Fd~I~~Gy~GpLylEIsp-rtfpI~vrp 156 (364)
T PF06559_consen 79 DGAVLEPGCVYLVPLMESLALPADISARANPKSSTG-RLDLFTRVITDGGAEFDRIPPGYSGPLYLEISP-RTFPILVRP 156 (364)
T ss_dssp S-EEE-TT-EEEEEEEEEEE--TTEEEEEEE-HHHH-HTTEEEEEEETT-SSTTEE-TT-EEEEEEEEEE-SSS-EEE-T
T ss_pred CCceecCCeEEEEEeEeeecCCcCcEEEEcCccccc-ccceEEEEeccCccccCccCCCCcccEEEEEcC-CeeeEEEcC
Confidence 346899999999999999999999999999999998 66776532 35999999999999999 588999999
Q ss_pred CCEEEEEEEeeec
Q 030635 137 GDRIAQLIIEKIV 149 (174)
Q Consensus 137 G~RIaQlV~~~~~ 149 (174)
|+|+.||.|.+-.
T Consensus 157 G~rL~QirFr~g~ 169 (364)
T PF06559_consen 157 GMRLSQIRFRRGQ 169 (364)
T ss_dssp T-EEEEEEEEES-
T ss_pred CCceeeEEEecCC
Confidence 9999999998643
No 33
>PHA03125 dUTPase; Provisional
Probab=98.94 E-value=1.4e-08 Score=88.43 Aligned_cols=101 Identities=21% Similarity=0.270 Sum_probs=89.9
Q ss_pred ceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEee
Q 030635 56 AAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVK 135 (174)
Q Consensus 56 dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~ 135 (174)
.+.+-|.....+.+.|++...+++|+++.+|+||++++.++++ .. .-.+.+|+||+| |++++.+.|.+..++.|.
T Consensus 150 ~srL~LtNk~iI~V~p~r~~IvpLGI~L~iPeG~fgIL~gkss-~v--~cvchtgLIdpG--geikLiL~N~Ts~~v~L~ 224 (376)
T PHA03125 150 TNKITLVNRELIWVPHDQVRIVKLDISLNIPDGFFGVITGHSN-DV--FCECVTEIITDE--TDISVFLMNLSEHSLMLL 224 (376)
T ss_pred CceEEEEcceeEEEeCCCceEEeceEEEecCCCeEEEEECCCC-CC--ceeecceeECCC--CcEEEEEEeCCCCcceec
Confidence 4788888888899999999999999999999999999999998 32 344589999999 999999999999999999
Q ss_pred CCCEEEEEEEeeeccCcEEEeccCCC
Q 030635 136 RGDRIAQLIIEKIVTPDVLEVQHLDS 161 (174)
Q Consensus 136 ~G~RIaQlV~~~~~~~~~~~v~~l~~ 161 (174)
+|+-=.-+.++++..|+.-++..|..
T Consensus 225 PGeLeVsI~aFpy~vPEPwq~~nL~P 250 (376)
T PHA03125 225 PGDVEFSINFLPCYIPEPWEMINLSP 250 (376)
T ss_pred CCceEEEEEEEEccCCCcccccCCCC
Confidence 99999999999999998766666653
No 34
>PHA03126 dUTPase; Provisional
Probab=98.67 E-value=1.4e-07 Score=81.68 Aligned_cols=80 Identities=23% Similarity=0.347 Sum_probs=67.8
Q ss_pred EEEECCCcccCCCCeEEEEEeCCCc--------ccccce---------eccceEEcCCCCcceEEEEEcCCCCCEEeeCC
Q 030635 75 ALVPTDLSIAIPEGTYAHIAPRSGL--------AWKHSM---------DVGAGVIDADYRGPVGVILFNHSDVDFEVKRG 137 (174)
Q Consensus 75 ~lV~Tgi~v~iP~g~~g~i~~RSsl--------a~k~gl---------~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G 137 (174)
.++++|+++.-|+||+.++..-|++ ..+ .+ .++.|+|||||||+|+++ .|..+...+|.+|
T Consensus 54 ~~~~lGv~~~~~~gyA~~L~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~GlID~GYrG~lk~i-~~~~~~~~~i~~g 131 (326)
T PHA03126 54 VLTDVGVRVACSSGYAIVLTQISGLLPVEPEPGNFS-NVTFPGNSAKYYTAYGIVDSGYRGVVKAV-QFAPGVNTSVPPG 131 (326)
T ss_pred EEecceeEEeCCCCeEEEEEeccCCCcccccccccc-ccccccccccceeeeceECCCcceEEEeE-eccCCCceeecCC
Confidence 5799999999999999999988864 012 23 457999999999999999 6888888999999
Q ss_pred CEEEEEEEeeeccCcEEEe
Q 030635 138 DRIAQLIIEKIVTPDVLEV 156 (174)
Q Consensus 138 ~RIaQlV~~~~~~~~~~~v 156 (174)
+-=.+|+.+++.++.+...
T Consensus 132 ~L~v~L~~~~~~t~~~~~~ 150 (326)
T PHA03126 132 QMSLGLVLVKLATETIHVT 150 (326)
T ss_pred ceEEEEEEEEeecceeecc
Confidence 9999999999999877533
No 35
>PHA03123 dUTPase; Provisional
Probab=97.43 E-value=0.00071 Score=60.22 Aligned_cols=76 Identities=20% Similarity=0.247 Sum_probs=56.9
Q ss_pred EEEEECCCcccCCCCeEEEEE-eCCCcc-cccceeccceEEcCCCCcceEEEEEcCCCCCEE-eeCCCEEEEEEEeeecc
Q 030635 74 KALVPTDLSIAIPEGTYAHIA-PRSGLA-WKHSMDVGAGVIDADYRGPVGVILFNHSDVDFE-VKRGDRIAQLIIEKIVT 150 (174)
Q Consensus 74 ~~lV~Tgi~v~iP~g~~g~i~-~RSsla-~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~-I~~G~RIaQlV~~~~~~ 150 (174)
..++.+|+++..|.||+-++. -+++-. .+.-+.+..|+||+||||.|+..++- +..++ |.+|.--.+|.+.++.+
T Consensus 85 ~~~ldlgvr~A~p~~Yavll~q~~~~~~~~~~~~~iAnGviDsGYRG~i~avl~~--~~~~t~ipp~~l~i~L~lvkL~~ 162 (402)
T PHA03123 85 IQQLDLGVKAAPPNEYALLLIQCIDSALADEDDFFIANGVIDAGYRGRICALLYY--KKGVTIILPGDLMIYLFPVKLAQ 162 (402)
T ss_pred EEEeccceeeecCCCeEEEEEeecCCCCCCCcceEEEeeeeccCccceEEEEEEe--cCcceeeCCCceEEEEEeeeeec
Confidence 357889999999999988654 333332 23224457999999999999988875 33444 99999999999888775
Q ss_pred C
Q 030635 151 P 151 (174)
Q Consensus 151 ~ 151 (174)
.
T Consensus 163 ~ 163 (402)
T PHA03123 163 S 163 (402)
T ss_pred c
Confidence 3
No 36
>PHA03130 dUTPase; Provisional
Probab=97.21 E-value=0.0015 Score=57.51 Aligned_cols=74 Identities=26% Similarity=0.412 Sum_probs=57.6
Q ss_pred EEEEECCCcccCCCCeEEEEE-eCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeeccC
Q 030635 74 KALVPTDLSIAIPEGTYAHIA-PRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIVTP 151 (174)
Q Consensus 74 ~~lV~Tgi~v~iP~g~~g~i~-~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~~~ 151 (174)
+.+|++++++.+|.||++.|. +-+|-+ - -.+..|+||+||||-++..++- ....-.+.+|+--.+|.|.++...
T Consensus 59 ~~~v~~~lr~a~p~~~~~~~~~~~~~~~-~--~~~~~g~idsgyrg~~~av~~a-p~~~~~~~pg~l~~~l~~~~~~~~ 133 (368)
T PHA03130 59 VGRVPLDLRVAMPTDFCAVVHAPPTAGA-P--YRVALGLIDSGYRGTVQAVVLA-PGETRRFAPGELRVDLTFLRVSGS 133 (368)
T ss_pred EEEecCceEEecCCCeEEEEeccccCCC-C--ceeEEEEeccCccceEEEEEEc-CCcccccCCCceEeeeEEEEeecC
Confidence 367999999999999999998 444422 2 1235799999999999876654 245667889998999999988754
No 37
>PF04797 Herpes_ORF11: Herpesvirus dUTPase protein; InterPro: IPR006882 This family of proteins are found in Herpesvirus. This family includes proteins called ORF10 and ORF11 amongst others.
Probab=97.13 E-value=0.0091 Score=53.14 Aligned_cols=103 Identities=15% Similarity=0.067 Sum_probs=74.3
Q ss_pred EEEccCCCCCCCCcCCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCC--eE-EEEEeCCCcccccceeccceEEcCC
Q 030635 39 VKKLSEKAVLPKRGSPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEG--TY-AHIAPRSGLAWKHSMDVGAGVIDAD 115 (174)
Q Consensus 39 v~~l~~~a~lP~~~~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g--~~-g~i~~RSsla~k~gl~v~~GvID~g 115 (174)
+.+..+....+.+... ..-.=+|...+++|+|+++..|..+-.+..+.. .. .+|.+-+.. ..+.+.+.+|-|+
T Consensus 246 ~F~~~~~~~~~~~~~~-~~v~~iY~~~~~~IpP~es~~v~~~~~y~~~~~~~~~~~~I~~~~~~---~~~~i~p~~W~P~ 321 (379)
T PF04797_consen 246 VFKHNPPPGSPWSWGR-WSVPPIYPGPEKTIPPGESTKVKYNNMYEQGNPSKITAFFICGLNDN---SDFVISPCEWLPG 321 (379)
T ss_pred EEeccCCcccCCCCCC-cEeeeEeCCCceEECCCCEEEEEEccEEEecCCCccceEEEEcCCCC---ceEEEeeeEECCC
Confidence 3344444444433321 226788889999999999999998877765432 22 234454443 2466789999886
Q ss_pred CCcceEEEEEcCCCCCEEeeCCCEEEEEEEee
Q 030635 116 YRGPVGVILFNHSDVDFEVKRGDRIAQLIIEK 147 (174)
Q Consensus 116 Y~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~ 147 (174)
..+.+.++|.++.+++|++|+++|+.+|..
T Consensus 322 --~~~~ltv~N~s~~p~~I~~gt~la~Aif~~ 351 (379)
T PF04797_consen 322 --SPLQLTVHNPSNFPITISRGTPLAQAIFIY 351 (379)
T ss_pred --CceEEEEEcCCCceEEecCCCEEEEEEEEe
Confidence 478999999999999999999999999985
No 38
>PF06559 DCD: 2'-deoxycytidine 5'-triphosphate deaminase (DCD); InterPro: IPR010550 This family consists of several bacterial 2'-deoxycytidine 5'-triphosphate deaminase proteins (3.5.4.13 from EC).; GO: 0008829 dCTP deaminase activity; PDB: 2R9Q_C.
Probab=97.01 E-value=0.0031 Score=55.50 Aligned_cols=84 Identities=19% Similarity=0.309 Sum_probs=55.8
Q ss_pred ceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec-cceEEcCCCCcc--------eEEEEEcCCCCCEEeeC
Q 030635 66 ETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV-GAGVIDADYRGP--------VGVILFNHSDVDFEVKR 136 (174)
Q Consensus 66 ~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v-~~GvID~gY~Ge--------i~i~l~N~~~~~~~I~~ 136 (174)
.++|.|++.++.-+.+++.+|++|++.+.|--.+. - -..+ .+|..||||--. -.+.+..+ +.||.|+.
T Consensus 247 ~liLdP~eFYil~Sre~v~iPp~~aAEM~p~~~~v-G-EfRvHYAGFFDPGFG~~~agg~Gsr~VLEVR~h-evPF~leh 323 (364)
T PF06559_consen 247 ELILDPGEFYILASREAVHIPPDYAAEMVPFDPLV-G-EFRVHYAGFFDPGFGHAEAGGAGSRAVLEVRSH-EVPFILEH 323 (364)
T ss_dssp EEEE-TT--EEEEEEEEE-B-TTEEEEEEE-GGGT-T-TEEEES--EE-TTTT-S-TTSS-EEEEEEEEES-SS-EEEET
T ss_pred eEEECCcceEEEeecccccCChhHhhhcccccccc-C-ceEEeeccccCCCCCcccccCCCceEEEEEecC-CCCeeeeC
Confidence 48899999999999999999999999999876653 1 1334 699999998321 23556554 78999999
Q ss_pred CCEEEEEEEeeeccCc
Q 030635 137 GDRIAQLIIEKIVTPD 152 (174)
Q Consensus 137 G~RIaQlV~~~~~~~~ 152 (174)
|+.|++||..++....
T Consensus 324 GQ~vgrLvyE~m~~~P 339 (364)
T PF06559_consen 324 GQIVGRLVYERMAERP 339 (364)
T ss_dssp T-EEEEEEEEEBSS--
T ss_pred CcEEEEEEehhhccCc
Confidence 9999999999988653
No 39
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp., such as Human cytomegalovirus (HHV-5) (Human herpesvirus 5). As viruses are reliant upon their host cell to serve as proper environments for their replication, many have evolved mechanisms to alter intracellular conditions to suit their own needs. HHV-5 induces quiescent cells to enter the cell cycle and then arrests them in late G(1), before they enter the S phase, a cell cycle compartment that is presumably favourable for viral replication. The protein product of the HHV-5 UL82 gene, pp71, can accelerate the movement of cells through the G(1) phase of the cell cycle. This activity would help infected cells reach the late G(1) arrest point sooner and thus may stimulate the infectious cycle. pp71 also induces DNA synthesis in quiescent cells, but a pp71 mutant protein that is unable to induce quiescent cells to enter the cell cycle still retains the ability to accelerate the G(1) phase. Thus, the mechanism through which pp71 accelerates G(1) cell cycle progression appears to be distinct from the one that it employs to induce quiescent cells to exit G(0) and subsequently enter the S phase [].; GO: 0009405 pathogenesis; PDB: 3BW9_C.
Probab=96.67 E-value=0.00043 Score=61.11 Aligned_cols=88 Identities=10% Similarity=0.147 Sum_probs=0.0
Q ss_pred CCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEE
Q 030635 54 PLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFE 133 (174)
Q Consensus 54 ~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~ 133 (174)
..+.||-+.++.++.+.||++..+.+...++-...|.|+++|+.- . ||.++.|.|.+.= .|.+.+.|.++ ++.
T Consensus 256 h~~NGf~V~~Pr~i~l~pg~~~~v~id~~feS~~~~~~lF~Pk~i---p-Glsis~~~w~~~~--~l~i~i~a~~~-~v~ 328 (348)
T PF05784_consen 256 HPRNGFTVLCPRNIHLKPGKTSHVTIDNAFESDQTYIGLFFPKDI---P-GLSISCGPWMERQ--PLFIEIRATGK-NVE 328 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEECCcceecCCCCeEEEEEeeeEecCCceEEEEecccC---C-CceeeeeccCCCc--eEEEEEEeccc-cee
Confidence 458999999999999999999999988888888889999999865 3 8989999999853 78999999766 999
Q ss_pred eeCCCEEEEEEEeee
Q 030635 134 VKRGDRIAQLIIEKI 148 (174)
Q Consensus 134 I~~G~RIaQlV~~~~ 148 (174)
|++++.++.+-|++-
T Consensus 329 i~~~q~LG~lhFf~r 343 (348)
T PF05784_consen 329 IRYGQPLGSLHFFPR 343 (348)
T ss_dssp ---------------
T ss_pred ecccceeeeEEEeec
Confidence 999999999988763
No 40
>PHA03365 hypothetical protein; Provisional
Probab=93.77 E-value=0.72 Score=41.76 Aligned_cols=102 Identities=12% Similarity=0.090 Sum_probs=69.0
Q ss_pred EccCCCCCCCCcCCCceeeeEEc-CcceEEcCCCEEEEECCCcc--cCCCCeEEEEEeCCCcccccceeccceEEcCCCC
Q 030635 41 KLSEKAVLPKRGSPLAAGYDLSS-STETKVPARGKALVPTDLSI--AIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYR 117 (174)
Q Consensus 41 ~l~~~a~lP~~~~~~dAG~DL~~-~~~~~I~Pg~~~lV~Tgi~v--~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~ 117 (174)
+.++-...|.+-. ++-..+.. --.+.|+|++.+.|..+-+. .+.....|+|..-++. . ...+...-|-|+
T Consensus 269 ~~NPy~~~pW~w~--~~siPIvY~Gp~V~IP~~~~t~V~YnN~Y~~~~~~~iTAiI~n~~~~--~-~f~i~~ceW~p~-- 341 (419)
T PHA03365 269 RYNPYPKSPWRWD--GASTPIVYFGPPVIIPPNCSTVVEYNNTYYSPLSLKITAIIVNHETN--P-DFYIYDCEWKPG-- 341 (419)
T ss_pred ecCCCCCCCCCCC--CCccCEEEeCCcEEeCCCceEEEEeCCEEEeccCCceEEEEEcCCCC--C-cEEEEeeecCCC--
Confidence 4444444554433 33344433 35578889998888877655 4567788888865553 2 344455555553
Q ss_pred cceEEEEEcCCCCCEEeeCCCEEEEEEEeeec
Q 030635 118 GPVGVILFNHSDVDFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 118 Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~ 149 (174)
....|.+.|.+..+++|..|+.+||.+|+=..
T Consensus 342 ~ta~I~V~N~S~fp~~i~~Gt~lg~A~Fi~A~ 373 (419)
T PHA03365 342 QTAKLMVTNTSNFPITISTGTHLGQAIFILAP 373 (419)
T ss_pred CeeEEEEEecCCCcEEeeCCCEeeEEEEEEcc
Confidence 35788999999999999999999999997433
No 41
>PF06284 Cytomega_UL84: Cytomegalovirus UL84 protein; InterPro: IPR010436 This family consists of several Cytomegalovirus UL84 proteins. The open reading frame UL84 of human cytomegalovirus encodes a multifunctional regulatory protein which is required for viral DNA replication and binds with high affinity to the immediate-early transactivator IE2-p86 [].
Probab=86.97 E-value=5.4 Score=36.56 Aligned_cols=85 Identities=8% Similarity=0.082 Sum_probs=59.2
Q ss_pred CceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEEEcCCCCCEEe
Q 030635 55 LAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVILFNHSDVDFEV 134 (174)
Q Consensus 55 ~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I 134 (174)
++.|+|++++.|+.++ ..+.+. ++-..---|.|++.|.-- -|+.+.+|+|-|-- +|.|.+.-.....++|
T Consensus 372 ~~~~LdV~~PyDl~lk--~s~~LR--iYRrfYGp~LGLFvP~~r----~~l~mpVtiWlPRT--WLEi~l~~~~~~g~tl 441 (530)
T PF06284_consen 372 GEGGLDVRLPYDLPLK--TSYTLR--IYRRFYGPFLGLFVPKNR----QGLKMPVTIWLPRT--WLEITLVGSNEHGVTL 441 (530)
T ss_pred CCCceEEecccceecC--Chhhee--hhhhhcccceeEecccCc----cceeeeEEeeeccc--eEEEEEEeeccccccc
Confidence 5789999999998763 222222 222334457788888754 36778899999954 4555554434578999
Q ss_pred eCCCEEEEEEEeeec
Q 030635 135 KRGDRIAQLIIEKIV 149 (174)
Q Consensus 135 ~~G~RIaQlV~~~~~ 149 (174)
.+|+-+.||-|..-.
T Consensus 442 ~R~~vLG~LYFiss~ 456 (530)
T PF06284_consen 442 PRDDVLGRLYFISSK 456 (530)
T ss_pred ccCceeeEEEEecch
Confidence 999999999997644
No 42
>PF05784 Herpes_UL82_83: Betaherpesvirus UL82/83 protein N terminus; InterPro: IPR008649 This family represents the N-terminal region of the UL82 and UL83 proteins from Betaherpesvirus sp., such as Human cytomegalovirus (HHV-5) (Human herpesvirus 5). As viruses are reliant upon their host cell to serve as proper environments for their replication, many have evolved mechanisms to alter intracellular conditions to suit their own needs. HHV-5 induces quiescent cells to enter the cell cycle and then arrests them in late G(1), before they enter the S phase, a cell cycle compartment that is presumably favourable for viral replication. The protein product of the HHV-5 UL82 gene, pp71, can accelerate the movement of cells through the G(1) phase of the cell cycle. This activity would help infected cells reach the late G(1) arrest point sooner and thus may stimulate the infectious cycle. pp71 also induces DNA synthesis in quiescent cells, but a pp71 mutant protein that is unable to induce quiescent cells to enter the cell cycle still retains the ability to accelerate the G(1) phase. Thus, the mechanism through which pp71 accelerates G(1) cell cycle progression appears to be distinct from the one that it employs to induce quiescent cells to exit G(0) and subsequently enter the S phase [].; GO: 0009405 pathogenesis; PDB: 3BW9_C.
Probab=65.61 E-value=2 Score=38.11 Aligned_cols=75 Identities=20% Similarity=0.223 Sum_probs=0.0
Q ss_pred EEcCcceEEcCCCEEEEECCCcccCCCCeEE---EEEeCCCccc--ccceeccceEEcCCCCcceEEEEEcCCCCCEEee
Q 030635 61 LSSSTETKVPARGKALVPTDLSIAIPEGTYA---HIAPRSGLAW--KHSMDVGAGVIDADYRGPVGVILFNHSDVDFEVK 135 (174)
Q Consensus 61 L~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g---~i~~RSsla~--k~gl~v~~GvID~gY~Gei~i~l~N~~~~~~~I~ 135 (174)
|+...+..++|+|++.+.||+.+..+.-.+- ...+.|.-.. ...|.+....+|+.=.++|.+.+.|.++.++...
T Consensus 13 l~~~~~~~~~p~E~k~l~tgl~V~v~~psVicv~q~~~~~~~~~~~~~~L~vkft~~~~~~~~nl~v~V~N~s~r~l~~~ 92 (348)
T PF05784_consen 13 LFSTQDTPFKPHETKILKTGLSVKVSQPSVICVTQETPSSQPPHRDDTDLQVKFTVFDGQEIDNLTVDVHNPSDRPLSPS 92 (348)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEecCCCccCCCcEEEEecCceEEeCCCeEEEEEeccCCCCCcccccccceeeEEEeccccccceEEEEECCCCCcCCCC
Confidence 4456677899999999999999998864333 3333333222 1236666777887545789999999988765443
No 43
>PHA03124 dUTPase; Provisional
Probab=60.02 E-value=45 Score=30.25 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=47.8
Q ss_pred EEEECCCcccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEEEE--EcCCC----------CCEEeeCCCEEEE
Q 030635 75 ALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGVIL--FNHSD----------VDFEVKRGDRIAQ 142 (174)
Q Consensus 75 ~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i~l--~N~~~----------~~~~I~~G~RIaQ 142 (174)
..+..-++..+|+||--.|-.-.. ..+.--.+-+|++|+||.|-+.+.+ .|.+. --+.+.+|.--|.
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (418)
T PHA03124 46 LKIDSAIRTALPPGYGIVISDTAE-GHAAAWEIIPGLVDADYTGLLGILLVLTDDGGNTLAGGEAGDGIVIFPPGGVHAR 124 (418)
T ss_pred EeehhhhhhcCCCcceEEEecccc-cchhhhhhccceecCCccceeeEEEEEecCCCccccccccCCceEEeCCCceEEE
Confidence 456777888899998765543111 1111123459999999999876544 55432 2467778877777
Q ss_pred EEEeeecc
Q 030635 143 LIIEKIVT 150 (174)
Q Consensus 143 lV~~~~~~ 150 (174)
|-+.++..
T Consensus 125 ~~~~~~~~ 132 (418)
T PHA03124 125 LNVIKLAN 132 (418)
T ss_pred EEEEEecC
Confidence 76666553
No 44
>PF09160 FimH_man-bind: FimH, mannose binding; InterPro: IPR015243 This domain adopts a secondary structure consisting of a beta sandwich, with nine strands arranged in two sheets in a Greek key topology. It is predominantly found in bacterial mannose-specific adhesins, and is capable of binding to D-mannose []. ; PDB: 3MCY_C 1KLF_D 1QUN_L 1KIU_L 3RFZ_D 2VCO_B 1TR7_A 1UWF_A 3JWN_N.
Probab=58.83 E-value=23 Score=27.77 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=48.6
Q ss_pred eeeeEEcCcceEEcCCCEEEEECCCccc----CCC-CeEEEEEeCCCcccccceecc-ceE-------------------
Q 030635 57 AGYDLSSSTETKVPARGKALVPTDLSIA----IPE-GTYAHIAPRSGLAWKHSMDVG-AGV------------------- 111 (174)
Q Consensus 57 AG~DL~~~~~~~I~Pg~~~lV~Tgi~v~----iP~-g~~g~i~~RSsla~k~gl~v~-~Gv------------------- 111 (174)
.-.+++..-.-.+.+|+-.+|.+.-.+. -|. .+.=++..|++.++-.-+... .++
T Consensus 13 G~anvyV~L~p~V~~gqNlVvDLS~~i~CkND~p~g~~~Dyv~l~~Gs~~~~~l~~f~g~l~~~g~~YpfPl~s~t~~~~ 92 (147)
T PF09160_consen 13 GSANVYVNLSPSVQVGQNLVVDLSQQIFCKNDDPSGQNVDYVNLTSGSAFGGVLKNFTGSLRYYGSSYPFPLNSETTVVN 92 (147)
T ss_dssp EEEEEEE---SBE-TTSEEEEEGGGTEEEE-SSTT-T--EEEEEEEEEEEHHHHHHEEEEEEETTEEEEES-SS----EE
T ss_pred cceeEEEecCCccccCccEEEEccceEEEECCCCCcceeeeEEEccCCccCchhhhccceEEEeCcCccccccCCceEEE
Confidence 3457777766678889988888775443 455 355566666544321111111 111
Q ss_pred EcC-CCCc-ceEEEEEcCC-CCCEEeeCCCEEEEEEEeeeccC
Q 030635 112 IDA-DYRG-PVGVILFNHS-DVDFEVKRGDRIAQLIIEKIVTP 151 (174)
Q Consensus 112 ID~-gY~G-ei~i~l~N~~-~~~~~I~~G~RIaQlV~~~~~~~ 151 (174)
+.+ -|.. .+++-|.-.+ ...+.|++||.||+|.+.+..+.
T Consensus 93 ~~~~~~~p~p~~LYLtp~~~a~Gv~I~~G~~iAtl~~~k~~t~ 135 (147)
T PF09160_consen 93 YQSGNYQPWPIKLYLTPVSAAGGVVINKGDLIATLNMHKTNTY 135 (147)
T ss_dssp E-SSS-EE--EEEEEEESTTSSEEEE-TTSEEEEEEEEEEESS
T ss_pred ecCCCcccccEEEEEEEccCCCcEEEeCCCEEEEEEEEEeccc
Confidence 111 1111 2344443322 34589999999999999987764
No 45
>PF04489 DUF570: Protein of unknown function (DUF570) ; InterPro: IPR007578 This proteins in this entry belong to the herpesvirus U10 family; there function is unknown.
Probab=51.98 E-value=1.8e+02 Score=26.69 Aligned_cols=86 Identities=16% Similarity=0.231 Sum_probs=62.1
Q ss_pred CCCceeeeEEcCcceEEcCCCEEEEECCCcccCCCCe-EEEEEeCCCcccccceeccceEEcCCCCcc-eEEEEEcCCCC
Q 030635 53 SPLAAGYDLSSSTETKVPARGKALVPTDLSIAIPEGT-YAHIAPRSGLAWKHSMDVGAGVIDADYRGP-VGVILFNHSDV 130 (174)
Q Consensus 53 ~~~dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~-~g~i~~RSsla~k~gl~v~~GvID~gY~Ge-i~i~l~N~~~~ 130 (174)
.+...-+-++||.|+...++....|.+.++..=|.+. +.+| |++.-..---....+|-+ |+ |+|.|+-. ..
T Consensus 341 ePn~~~ltVhAPYDI~F~~~~~h~V~ldIrY~~~~~r~cFLV---s~~p~e~~F~T~m~vW~~---~~PLkiTL~S~-~~ 413 (429)
T PF04489_consen 341 EPNPFELTVHAPYDIHFYHSRRHTVELDIRYTQPNDRQCFLV---SNLPNEDSFHTGMTVWRP---DEPLKITLWSP-SR 413 (429)
T ss_pred CCCCceEEEeCcceEEecCCccEEEEeeeEEcccCCceEEEE---ecCCCCCeeEeeeEEecC---CCceEEEEecC-CC
Confidence 4456678889999999999999999999988888887 4555 333222111123445665 45 99999875 45
Q ss_pred CEEeeCCCEEEEEEE
Q 030635 131 DFEVKRGDRIAQLII 145 (174)
Q Consensus 131 ~~~I~~G~RIaQlV~ 145 (174)
...|..|..||-|..
T Consensus 414 ~LviPqGtPIA~Ly~ 428 (429)
T PF04489_consen 414 NLVIPQGTPIATLYQ 428 (429)
T ss_pred ceEccCCCceeEEEe
Confidence 899999999998753
No 46
>PF06030 DUF916: Bacterial protein of unknown function (DUF916); InterPro: IPR010317 This family consists of putative cell surface proteins, from Firmicutes, of unknown function.
Probab=37.82 E-value=36 Score=25.46 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=22.2
Q ss_pred cceEEcCCCEEEEECCCcccCCCC-eEEEEEe
Q 030635 65 TETKVPARGKALVPTDLSIAIPEG-TYAHIAP 95 (174)
Q Consensus 65 ~~~~I~Pg~~~lV~Tgi~v~iP~g-~~g~i~~ 95 (174)
+.++|+|++...|+. .+.||+. |-|.+++
T Consensus 85 ~~Vtl~~~~sk~V~~--~i~~P~~~f~G~ilG 114 (121)
T PF06030_consen 85 KEVTLPPNESKTVTF--TIKMPKKAFDGIILG 114 (121)
T ss_pred cEEEECCCCEEEEEE--EEEcCCCCcCCEEEe
Confidence 448999999999885 5788865 6666654
No 47
>cd00235 TLP-20 Telokin-like protein-20 (TLP-20) domain; a baculovirus protein that shares some antigenic similarities to the smooth muscle protein telokin, a kinase-related protein
Probab=37.39 E-value=72 Score=23.82 Aligned_cols=27 Identities=30% Similarity=0.452 Sum_probs=22.7
Q ss_pred CcceEEEEEcCCCCCEEeeCCCEEEEEEE
Q 030635 117 RGPVGVILFNHSDVDFEVKRGDRIAQLII 145 (174)
Q Consensus 117 ~Gei~i~l~N~~~~~~~I~~G~RIaQlV~ 145 (174)
+..+.++|+| .+|..+++|+.|.|++.
T Consensus 80 ~~~i~viLfn--~kp~~lkk~~~iFki~~ 106 (108)
T cd00235 80 SNGINVILFN--KKPIILKKGSCIFKIKY 106 (108)
T ss_pred CCCeEEEEEE--ccceEEEcCcEEEEEEe
Confidence 3468899999 46899999999999875
No 48
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=35.99 E-value=26 Score=29.85 Aligned_cols=68 Identities=19% Similarity=0.163 Sum_probs=40.6
Q ss_pred CCCcccCCCCeEEEEEeCCCcccccce-eccceEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEEEEeeec
Q 030635 79 TDLSIAIPEGTYAHIAPRSGLAWKHSM-DVGAGVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 79 Tgi~v~iP~g~~g~i~~RSsla~k~gl-~v~~GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~~~ 149 (174)
-++.+++.+|-+.=|.+.|+.+ |+-| .+..|+-.| +.|+|.+--.-... .-.-+.--|.+||||..-.
T Consensus 24 ~~VS~~i~~Ge~lgivGeSGsG-KSTL~r~l~Gl~~p-~~G~I~~~G~~~~~-~~~~~~~~~~VQmVFQDp~ 92 (252)
T COG1124 24 NNVSLEIERGETLGIVGESGSG-KSTLARLLAGLEKP-SSGSILLDGKPLAP-KKRAKAFYRPVQMVFQDPY 92 (252)
T ss_pred cceeEEecCCCEEEEEcCCCCC-HHHHHHHHhcccCC-CCceEEECCcccCc-cccchhhccceeEEecCCc
Confidence 3456677777666788999987 4333 345886666 77888653211000 0001134688999997543
No 49
>PF03712 Cu2_monoox_C: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; PDB: 1YI9_A 3MLL_A 1SDW_A 3MID_A 1YIP_A 3PHM_A 3MIC_A 3MIB_A 1OPM_A 3MIG_A ....
Probab=31.00 E-value=2.5e+02 Score=21.65 Aligned_cols=18 Identities=11% Similarity=0.106 Sum_probs=11.9
Q ss_pred CCEEeeCCCEEEEEEEee
Q 030635 130 VDFEVKRGDRIAQLIIEK 147 (174)
Q Consensus 130 ~~~~I~~G~RIaQlV~~~ 147 (174)
++++|.+||+|+--....
T Consensus 85 ~~v~i~~GD~l~~~C~Yd 102 (156)
T PF03712_consen 85 EPVTIPPGDTLRTECTYD 102 (156)
T ss_dssp EEEEE-TT-EEEEEEEEE
T ss_pred CceEecCCCEEEEEEEEe
Confidence 578999999987665544
No 50
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=29.89 E-value=24 Score=17.51 Aligned_cols=6 Identities=67% Similarity=1.221 Sum_probs=4.7
Q ss_pred CCCCcC
Q 030635 168 GFGSTG 173 (174)
Q Consensus 168 GFGSTG 173 (174)
|||||-
T Consensus 1 GYGSTq 6 (16)
T PF00818_consen 1 GYGSTQ 6 (16)
T ss_pred CCCccc
Confidence 789984
No 51
>PRK13274 mdoG glucan biosynthesis protein G; Provisional
Probab=29.64 E-value=3.2e+02 Score=25.77 Aligned_cols=78 Identities=21% Similarity=0.373 Sum_probs=44.0
Q ss_pred eEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceec----------cceEEcCCCCcceE----EEEEcCCCCCE
Q 030635 67 TKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDV----------GAGVIDADYRGPVG----VILFNHSDVDF 132 (174)
Q Consensus 67 ~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v----------~~GvID~gY~Gei~----i~l~N~~~~~~ 132 (174)
++|.||+.+.+. .-+.|++|..+. +.||.- .....| |||-|+. +.+.|-
T Consensus 227 F~i~PG~~T~~d----------V~a~Lf~R~~v~-~lGiAPLTSMf~~gen~~~~~d-D~RPeVHDSDGL~i~~g----- 289 (516)
T PRK13274 227 FVIRPGEDTVVD----------VQATLFPRDDVE-KLGIAPLTSMFLFGPNQPSPAD-DFRPEVHDSDGLLIHTG----- 289 (516)
T ss_pred EEEeCCCCeEEE----------EEEEEEcCCCcc-cccccchhhhhccCCCCCCCCC-CCCCccccCCceEEecC-----
Confidence 666777655543 456788888875 557642 122233 7888772 444442
Q ss_pred EeeCCCEEEEEEEeeeccCcEEEeccCCCCcCCCCCCC
Q 030635 133 EVKRGDRIAQLIIEKIVTPDVLEVQHLDSTVRGEGGFG 170 (174)
Q Consensus 133 ~I~~G~RIaQlV~~~~~~~~~~~v~~l~~t~RG~~GFG 170 (174)
.|+ -+-.|+..|.-..++.|. .++-.|||
T Consensus 290 ---~GE----~iWRPL~NP~~l~~S~F~--d~~p~GFG 318 (516)
T PRK13274 290 ---NGE----WLWRPLNNPKRLQVSSFA--DENPKGFG 318 (516)
T ss_pred ---CCc----EEeeCCCCCCCceEeeEE--CCCCCccc
Confidence 222 345666677665566553 23446676
No 52
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=27.10 E-value=87 Score=27.77 Aligned_cols=66 Identities=15% Similarity=0.248 Sum_probs=45.3
Q ss_pred cccCCC-CeEEEEEeCCCcccccceeccceEEcCCCCcceEE--EEEcCCCCCEEeeCCCEEEEEEEeeec
Q 030635 82 SIAIPE-GTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGV--ILFNHSDVDFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 82 ~v~iP~-g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i--~l~N~~~~~~~I~~G~RIaQlV~~~~~ 149 (174)
.+.+|. |..+ +|++|+-+.-+-|.+-.|.+-|| .|+|.+ ...+.+.+.+.+++-.|=.=.||+..-
T Consensus 18 ~~~~p~~GvTA-lFG~SGsGKTslin~IaGL~rPd-eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDAR 86 (352)
T COG4148 18 NFTLPARGITA-LFGPSGSGKTSLINMIAGLTRPD-EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDAR 86 (352)
T ss_pred eccCCCCceEE-EecCCCCChhhHHHHHhccCCcc-ccEEEECCEEeecccCCcccChhhheeeeEeeccc
Confidence 456676 6666 89999987333344569999998 477655 223445777888888887777886543
No 53
>COG2430 Uncharacterized conserved protein [Function unknown]
Probab=24.13 E-value=2.9e+02 Score=23.36 Aligned_cols=22 Identities=18% Similarity=0.145 Sum_probs=17.2
Q ss_pred CCCCcceEEEEEcCCCCCEEee
Q 030635 114 ADYRGPVGVILFNHSDVDFEVK 135 (174)
Q Consensus 114 ~gY~Gei~i~l~N~~~~~~~I~ 135 (174)
+-.+|.+++.+.|.+++.++|.
T Consensus 142 ~~~egv~kl~v~N~sd~wv~Is 163 (236)
T COG2430 142 PPGEGVAKLTVVNTSDEWVTIS 163 (236)
T ss_pred CcccceEEEEEEecCCCeEEEE
Confidence 3347889999999998876654
No 54
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=23.62 E-value=51 Score=27.84 Aligned_cols=40 Identities=23% Similarity=0.393 Sum_probs=26.6
Q ss_pred cccCCCCeEEEEEeCCCcccccceeccceEEcCCCCcceEE
Q 030635 82 SIAIPEGTYAHIAPRSGLAWKHSMDVGAGVIDADYRGPVGV 122 (174)
Q Consensus 82 ~v~iP~g~~g~i~~RSsla~k~gl~v~~GvID~gY~Gei~i 122 (174)
.+.|-.|-.-.++++|+...-.-+.+.+|+++|. +|++++
T Consensus 25 sL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~-~G~i~l 64 (259)
T COG4525 25 SLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS-RGSIQL 64 (259)
T ss_pred ceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc-cceEEE
Confidence 3344455555678899987443345579999997 677765
No 55
>PF04254 DUF432: Protein of unknown function (DUF432); InterPro: IPR007366 This is an archaeal protein of unknown function.
Probab=22.74 E-value=3.3e+02 Score=20.37 Aligned_cols=23 Identities=26% Similarity=0.117 Sum_probs=18.1
Q ss_pred EcCCCCcceEEEEEcCCCCCEEee
Q 030635 112 IDADYRGPVGVILFNHSDVDFEVK 135 (174)
Q Consensus 112 ID~gY~Gei~i~l~N~~~~~~~I~ 135 (174)
.|+. +|-+++.+.|.+++...+.
T Consensus 88 ~~~~-~av~~v~I~N~s~~~~~v~ 110 (123)
T PF04254_consen 88 SDPL-EAVTKVTIRNNSDEWVTVS 110 (123)
T ss_pred CCCe-eEEEEEEEEcCCCCeEEEE
Confidence 4555 8888999999888887776
No 56
>PF01629 DUF22: Domain of unknown function DUF22; InterPro: IPR002572 This region is found in 1 to 3 copies in archaeal proteins whose function is unknown. It only appears in multiple copies in proteins from Archaeoglobus fulgidus.
Probab=22.62 E-value=1.2e+02 Score=22.57 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=30.0
Q ss_pred ceeeeEEcCcceEEcCCCEEEEECCCcccCCCCeEEEEE
Q 030635 56 AAGYDLSSSTETKVPARGKALVPTDLSIAIPEGTYAHIA 94 (174)
Q Consensus 56 dAG~DL~~~~~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~ 94 (174)
.-.-=|.|.||+.+..|+...|.. ..++||+++..+..
T Consensus 36 g~wepiIAdEdvevk~Ge~~~IkI-k~I~iP~~tIv~p~ 73 (112)
T PF01629_consen 36 GKWEPIIADEDVEVKKGEVKIIKI-KKIEIPPNTIVMPC 73 (112)
T ss_pred eeEEEEEEcCeeEEecCCEEEEEE-EEEecCCCCEEEEc
Confidence 455667889999999999988876 46899999865443
No 57
>PF05726 Pirin_C: Pirin C-terminal cupin domain; InterPro: IPR008778 This entry represents C-terminal domain of Pirin proteins from both eukaryotes and prokaryotes. The function of Pirin is unknown but the gene coding for this protein is known to be expressed in all tissues in the human body although it is expressed most strongly in the liver and heart. Pirin is known to be a nuclear protein, exclusively localised within the nucleoplasma and predominantly concentrated within dot-like subnuclear structures []. Pirin is composed of two structurally similar domains arranged face to face. The N-terminal domain additionally features four beta-strands, and the C-terminal domain also includes four additional -strands and a short alpha-helix. Although the two domains are similar, the C-terminal domain of Pirin differs from the N-terminal domain as it does not contain a metal binding site and its sequence does not contain the conserved metal-coordinating residues []. Pirin is confirmed to be a member of the cupin superfamily on the basis of primary sequence and structural similarity. The presence of a metal binding site in the N-terminal beta-barrel of Pirin, may be significant in its role in regulating NFI DNA replication and NF-kappaB transcription factor activity []. Pirin structure has been found to closely resemble members of the cupin superfamily. Pirin contains the two characteristic sequences of the cupin superfamily, namely PG-(X)5-HXH-(X)4-E-(X)6-G and G-(X)5-PXG-(X)2-H-(X)3-N separated by a variable stretch of 15-50 amino acids. These motifs are best conserved in the N-terminal where the conserved histidine and glutamic acid residues correspond to the metal-coordinating residues. The C-terminal domain motifs lack the metal binding residues normally associated with the cupin fold []. Pirin was identified to be a metal-binding protein [], and was found that the metal-binding residues of Pirins are highly conserved across mammals, plants, fungi, and prokaryotic organisms. Pirin acts as a cofactor for the transcription factor NFI, the regulatory mechanism of which is generally believed to require the assistance of a metal ion []. Structural data supports the hypothesis that the bound iron of Pirin may participate in this transcriptional regulation by enhancing and stabilising the formation of the p50,Bcl3,DNA complex []. Metals have been implicated directly or indirectly in the NF-kappaB family of transcription factors that control expression of a number of early response genes associated with inflammatory responses, cell growth, cell cycle progression, and neoplastic transformation []. However, most metal-dependent transcription factors are DNA-binding proteins that bind to specific sequences when the metal binds to the protein. Pirin, on the other hand, appears to function differently and bind to the transcription factor DNA complex [].; PDB: 1J1L_A 3ACL_A 2P17_A.
Probab=22.43 E-value=2.9e+02 Score=19.54 Aligned_cols=64 Identities=20% Similarity=0.419 Sum_probs=35.8
Q ss_pred ceEEcCCCEEEEECCCcccCCCCeEEEEEeCCCcccccceeccc--eEEcCCCCcceEEEEEcCCCCCEEeeCCCEEEEE
Q 030635 66 ETKVPARGKALVPTDLSIAIPEGTYAHIAPRSGLAWKHSMDVGA--GVIDADYRGPVGVILFNHSDVDFEVKRGDRIAQL 143 (174)
Q Consensus 66 ~~~I~Pg~~~lV~Tgi~v~iP~g~~g~i~~RSsla~k~gl~v~~--GvID~gY~Gei~i~l~N~~~~~~~I~~G~RIaQl 143 (174)
|+.++|+....++ +|+++.++++..++-. .+.. ..+.++ .+.+.+ ....+.+..++.=|++
T Consensus 3 di~l~~g~~~~~~------~~~~~~~~iyv~~G~~-----~v~~~~~~~~~~-----~~~~l~-~g~~i~~~a~~~~a~~ 65 (104)
T PF05726_consen 3 DIKLEPGASFTLP------LPPGHNAFIYVLEGSV-----EVGGEEDPLEAG-----QLVVLE-DGDEIELTAGEEGARF 65 (104)
T ss_dssp EEEE-TT-EEEEE------EETT-EEEEEEEESEE-----EETTTTEEEETT-----EEEEE--SECEEEEEESSSSEEE
T ss_pred EEEECCCCEEEee------cCCCCEEEEEEEECcE-----EECCCcceECCC-----cEEEEC-CCceEEEEECCCCcEE
Confidence 5678888876554 6899999999887742 1111 123321 233334 5667777777555666
Q ss_pred EEe
Q 030635 144 IIE 146 (174)
Q Consensus 144 V~~ 146 (174)
++.
T Consensus 66 lll 68 (104)
T PF05726_consen 66 LLL 68 (104)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 58
>PF06088 TLP-20: Nucleopolyhedrovirus telokin-like protein-20 (TLP20); InterPro: IPR009092 The baculovirus, Autographa californica nuclear polyhedrosis virus (AcMNPV), telokin-like protein (Tlp20) lies in a region of the baculoviral genome that is expressed late in the viral replication cycle, however its function is unknown. Tlp20 was discovered using anti-telokin antibodies, telokin being the C-terminal domain of smooth-muscle myosin light-chain kinase []. Both Tlp20 and telokin display a seven-stranded antiparallel beta-barrel structure, although the 3-dimensional structures of the beta-barrels are different and there is no sequence homology between the two. Tlp20 is structurally similar to dUTPase in its fold and trimeric assembly [].; PDB: 1TUL_A.
Probab=21.81 E-value=1.6e+02 Score=23.68 Aligned_cols=28 Identities=25% Similarity=0.386 Sum_probs=19.1
Q ss_pred cceEEEEEcCCCCCEEeeCCCEEEEEEEee
Q 030635 118 GPVGVILFNHSDVDFEVKRGDRIAQLIIEK 147 (174)
Q Consensus 118 Gei~i~l~N~~~~~~~I~~G~RIaQlV~~~ 147 (174)
+.|.++|+|. +++.|++|+.|+|+++..
T Consensus 81 ~~ln~iLfn~--k~~~lkK~~~iF~i~~~~ 108 (169)
T PF06088_consen 81 NGLNAILFNI--KPIVLKKGQCIFKIVYWN 108 (169)
T ss_dssp S--EEEEEES--S-EEE-TT-EEEEEEEE-
T ss_pred CCceEEEEEe--cceeeecCceEEEEEecC
Confidence 4677888885 499999999999999976
No 59
>PHA02762 hypothetical protein; Provisional
Probab=21.23 E-value=2.5e+02 Score=18.49 Aligned_cols=37 Identities=22% Similarity=0.417 Sum_probs=21.2
Q ss_pred EEcCCCCcceEEEEEcCCCC---------CEEeeCCCEEEEEEEeeec
Q 030635 111 VIDADYRGPVGVILFNHSDV---------DFEVKRGDRIAQLIIEKIV 149 (174)
Q Consensus 111 vID~gY~Gei~i~l~N~~~~---------~~~I~~G~RIaQlV~~~~~ 149 (174)
.||.+| |+|.+.+ |.+.+ .+-|-...|||-+-+.|..
T Consensus 4 ~idn~f-gnlii~~-~rs~~ks~eg~afvtigide~g~iayisiep~d 49 (62)
T PHA02762 4 LIDNDF-GNLIIEF-KRNVEKSFEGEAFVTIGIDENDKISYISIEPLD 49 (62)
T ss_pred EecCCC-ccEEEEE-ecCccccccccEEEEEeECCCCcEEEEEecccc
Confidence 377777 7776666 53321 2335556667666665543
Done!