Query 030638
Match_columns 174
No_of_seqs 170 out of 1117
Neff 6.5
Searched_HMMs 29240
Date Tue Mar 26 18:32:54 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/030638.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_2337-2341//hhsearch_pdb/030638hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3x_A Delta-1-pyrroline-5-car 1.0 1 1 216.0 15.7 155 2-172 401-561 (563)
2 2wme_A BADH, betaine aldehyde 1.0 1 1 215.1 14.8 146 2-163 338-485 (490)
3 3iwj_A Putative aminoaldehyde 1.0 1 1 211.9 15.7 155 2-174 346-502 (503)
4 3ed6_A Betaine aldehyde dehydr 1.0 1 1 209.3 14.8 152 2-169 365-518 (520)
5 3sza_A Aldehyde dehydrogenase, 1.0 1 1 205.1 14.9 145 12-174 315-463 (469)
6 3u4j_A NAD-dependent aldehyde 1.0 1 1 201.6 14.4 148 2-169 356-505 (528)
7 3ek1_A Aldehyde dehydrogenase; 1.0 1 1 201.5 13.7 139 2-162 363-503 (504)
8 4f3x_A Putative aldehyde dehyd 1.0 1 1 201.1 13.9 141 2-162 355-498 (498)
9 3ifg_A Succinate-semialdehyde 1.0 1 1 199.8 13.2 138 2-160 343-483 (484)
10 4h7n_A Aldehyde dehydrogenase; 1.0 1 1 198.6 14.6 146 2-164 318-466 (474)
No 1
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=1.00 E-value=1 Score=216.02 Aligned_cols=155 Identities=24% Similarity=0.348 Sum_probs=127.2
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++++.+|+++++||..++. .++|++|||+.... +++++++||+||||++|++|+|+++||+|++
T Consensus 401 ~~~i~~a~~~~ga~v~~GG~~~~~-----~G~fv~PTvl~~v~------~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ 469 (563)
T 4e3x_A 401 KKWLEHARSSPSLSILAGGQCNES-----VGYYVEPCIIESKD------PQEPIMKEEIFGPVLTVYVYPDDKYRETLKL 469 (563)
T ss_dssp HHHHHHHHHCTTEEEEECCCEECS-----SSCEECCEEEEESC------TTCGGGTSCCCSSEEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCC-----CCCEECCEEEECCC------CCCHHHCCCCCCEEEEEEEECCCCHHHHHHH
T ss_conf 999998764699789957864778-----98676578995699------9886663877470899999889999999999
Q ss_pred H-HCCCCCCEEEEECCCHHHHHHHHHHCC--CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CH--HHHHHHCEECE
Q ss_conf 8-639998269994499889999997733--553663668733578878777998899998479-76--67854001013
Q 030638 82 L-ERMHAHLTAAVVSNDPLFLQEVIGNTV--NGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIG-TP--EAIKLVWSSHR 155 (174)
Q Consensus 82 a-n~~~~gLta~Vft~d~~~~~~v~~~~~--~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G-~~--~~~~~~~~~~k 155 (174)
+ |+++|||+++|||+|.+++.+++++++ +|++|+| +.+++.... ..||||+|.||+| ++ ...++.|++.|
T Consensus 470 ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN--~~~~~~~~~--~~PFGG~k~SG~g~~~~G~~~l~~~~~~k 545 (563)
T 4e3x_A 470 VDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYIN--DKSTGSVVG--QQPFGGARASGTNDKPGGPHYILRWTSPQ 545 (563)
T ss_dssp HHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEES--SCSCCCCTT--TSCCCCEETTBCCCCTTSTTGGGGGBCCE
T ss_pred HHCCCCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEEC--CCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHHCCEE
T ss_conf 97189988779999089999999997423274599992--897788768--89989946267887667899999858158
Q ss_pred EEEECCCCCCCCCCCCC
Q ss_conf 99983588888776999
Q 030638 156 EIIYDYGPVPGNWEIPP 172 (174)
Q Consensus 156 ~v~~~~~~~~~~~~~~~ 172 (174)
+|++++.+ |.+|.||-
T Consensus 546 ~v~~~~~~-~~~~~yp~ 561 (563)
T 4e3x_A 546 VIKETHKP-LGDWRYSY 561 (563)
T ss_dssp EEEEECSC-CCCSSCTT
T ss_pred EEEEECCC-CCCCCCCC
T ss_conf 99993737-87666888
No 2
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=1.00 E-value=1 Score=215.09 Aligned_cols=146 Identities=18% Similarity=0.277 Sum_probs=120.9
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++.+ +|+++++||......... .+.|++|||+... + ++|++++||+||||++|++|+|+ ||+|++
T Consensus 338 ~~~i~~a~~-~Ga~v~~gG~~~~~~~~~-~G~~~~Ptvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 407 (490)
T 2wme_A 338 LGYIESGKA-QKARLLCGGERVTDGAFG-KGAYVAPTVFTDC-R-----DDMTIVREEIFGPVMSILVYDDE--DEAIRR 407 (490)
T ss_dssp HHHHHHHHH-TTCEEEECCSBCCTTTGG-GTTCBCCEEEESC-C-----TTSHHHHSCCCSSEEEEEEESCH--HHHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCCCCCCC-CCCCCCCEEEECC-C-----CCCHHHHCCCCCCEEEEEEECCH--HHHHHH
T ss_conf 999998875-698999778426755455-7875698799807-9-----98754413524778999996999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEE
Q ss_conf 863999826999449988999999773355366366873357887877799889999847976--678540010139998
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIY 159 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~ 159 (174)
+|+++|||+++|||+|.+++.++++++++|++|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.+
T Consensus 408 aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN--~~~~~~~~----~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i 481 (490)
T 2wme_A 408 ANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWIN--TWGESPAE----MPVGGYKQSGVGRENGLTTLAHYTRIKSVQV 481 (490)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEES--CCSCCCTT----SCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEE--CCCCCCCC----CCCCCCCCCCCCCHHHHHHHHHHHCEEEEEE
T ss_conf 96699997699994999999999987876179994--89987789----8826503150372217999999624119999
Q ss_pred CCCC
Q ss_conf 3588
Q 030638 160 DYGP 163 (174)
Q Consensus 160 ~~~~ 163 (174)
++++
T Consensus 482 ~~g~ 485 (490)
T 2wme_A 482 ELGD 485 (490)
T ss_dssp ECSC
T ss_pred ECCC
T ss_conf 7888
No 3
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=1.00 E-value=1 Score=211.89 Aligned_cols=155 Identities=21% Similarity=0.297 Sum_probs=128.7
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++.+ +|+++++||...+. . ..+.|++|||+.. ++ ++|++++||+||||++|++|+|. ||+|++
T Consensus 346 ~~~i~~a~~-~Ga~v~~gG~~~~~--~-~~g~~~~PTvl~~-v~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 413 (503)
T 3iwj_A 346 LKFVSNAKS-EGATILTGGSRPEH--L-KKGFFIEPTIITD-VT-----TNMQIWREEVFGPVLCVKTFSTE--EEAIDL 413 (503)
T ss_dssp HHHHHHHHH-TTCEEEECCSCCTT--C-CSSSCCCCEEEES-CC-----TTSHHHHSCCCSSEEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCCC--C-CCCCEECCEEEEC-CC-----CCCHHHCCEEECCEEEEEEECCH--HHHHHH
T ss_conf 999999997-79999826877766--7-8875108756506-99-----97642186005836999981999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEE
Q ss_conf 863999826999449988999999773355366366873357887877799889999847976--678540010139998
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIY 159 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~ 159 (174)
+|+++|||+++|||+|.+++.++++++++|.+|+| +.....+. .||||+|.||+|++ ..+++.|++.|+|.+
T Consensus 414 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN--~~~~~~~~----~PfGG~k~SG~G~~~G~~g~~~f~~~k~v~~ 487 (503)
T 3iwj_A 414 ANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVN--CSQPCFTQ----APWGGVKRSGFGRELGEWGLDNYLSVKQVTQ 487 (503)
T ss_dssp HTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEES--SSCCCCTT----SCBCCSGGGEECCBSHHHHHHTTEEEEEEEE
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE
T ss_conf 86799885799989999999999986882469985--99888889----9808867565787546999999607689999
Q ss_pred CCCCCCCCCCCCCCC
Q ss_conf 358888877699999
Q 030638 160 DYGPVPGNWEIPPST 174 (174)
Q Consensus 160 ~~~~~~~~~~~~~~~ 174 (174)
++...|+.|..||+.
T Consensus 488 ~~~~~~~~~~~~p~~ 502 (503)
T 3iwj_A 488 YISEEPWGWYQPPAK 502 (503)
T ss_dssp ECCSSCCCCSCCCCC
T ss_pred ECCCCCCCCCCCCCC
T ss_conf 478775424599988
No 4
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=1.00 E-value=1 Score=209.29 Aligned_cols=152 Identities=20% Similarity=0.245 Sum_probs=124.7
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++.+ +|+++++||........ ..+.|++|||+... + ++|++++||+||||++|++|+|+ ||+|++
T Consensus 365 ~~~i~~a~~-~Ga~v~~gG~~~~~~~~-~~g~f~~PTvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 434 (520)
T 3ed6_A 365 ESYMDVAKA-EGATIAVGGKRPDRDDL-KDGLFFEPTVITNC-D-----TSMRIVQEEVFGPVVTVEGFETE--QEAIQL 434 (520)
T ss_dssp HHHHHHHHH-TTCEEEECCSCCCCGGG-TTTTCCCCEEEESC-C-----TTSHHHHSCCCSSEEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCCCCCC-CCCCEECCEEEECC-C-----CCCCCCCCCEECCEEEEEEECCH--HHHHHH
T ss_conf 999999986-89999857876766557-89846788477358-9-----98701067126737999996999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEE
Q ss_conf 863999826999449988999999773355366366873357887877799889999847976--678540010139998
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIY 159 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~ 159 (174)
+|+++|||+++|||+|.+++.++++++++|++|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.+
T Consensus 435 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN--~~~~~~~~----~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~~ 508 (520)
T 3ed6_A 435 ANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWIN--DFHPYFAQ----APWGGYKQSGIGRELGKEGLEEYLVSKHILT 508 (520)
T ss_dssp HTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEES--CSCCCCTT----SCBCCSGGGEESCBSHHHHHHTTEEEEEEEE
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE
T ss_conf 85799980799987999999999987874669988--98888899----8828837672786654999998516699999
Q ss_pred CCCCCCCCCC
Q ss_conf 3588888776
Q 030638 160 DYGPVPGNWE 169 (174)
Q Consensus 160 ~~~~~~~~~~ 169 (174)
++...+++|+
T Consensus 509 ~~~~~~~~~~ 518 (520)
T 3ed6_A 509 NTNPQLVNWF 518 (520)
T ss_dssp ESSCCCCCCS
T ss_pred CCCCCCCCCC
T ss_conf 2787766756
No 5
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=1.00 E-value=1 Score=205.10 Aligned_cols=145 Identities=18% Similarity=0.208 Sum_probs=119.1
Q ss_pred CCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHCCCCCCEE
Q ss_conf 99699937743678888877532441799715301103787655310123042469994189977899998639998269
Q 030638 12 PGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNALERMHAHLTA 91 (174)
Q Consensus 12 ~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~an~~~~gLta 91 (174)
+|+++++||..... +.|++|||+.. ++ ++|++++||+||||++|++|+|+ ||+|+++|+++|||++
T Consensus 315 ~ga~v~~GG~~~~~------g~~~~PTvl~~-v~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~aN~~~~gLaa 380 (469)
T 3sza_A 315 EGQKVAYGGTGDAA------TRYIAPTILTD-VD-----PQSPVMQEEIFGPVLPIVCVRSL--EEAIQFINQREKPLAL 380 (469)
T ss_dssp TTSEEEECCCEETT------TTEECCEEEES-CC-----TTSGGGTSCCCSSEEEEEECSSH--HHHHHHHHHSCCCSEE
T ss_pred CCCEEEECCCCCCC------CCEECCEEECC-CC-----CCCHHHHCCCCCCEEEEEECCCH--HHHHHHHHCCCCCCEE
T ss_conf 49878737864889------86567756248-99-----84354524001875899860999--9999999769998469
Q ss_pred EEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEECCCC--CCCC
Q ss_conf 99449988999999773355366366873357887877799889999847976--6785400101399983588--8887
Q 030638 92 AVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIYDYGP--VPGN 167 (174)
Q Consensus 92 ~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~~~~~--~~~~ 167 (174)
+|||+|.+++.++++++++|.+|+|........+. .||||+|.||+||+ ..+++.|++.|+|.+.... .+..
T Consensus 381 ~v~t~d~~~a~~~~~~l~~G~V~vN~~~~~~~~~~----~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~~~~~~~~~ 456 (469)
T 3sza_A 381 YMFSSNDKVIKKMIAETSSGGVAANDVIVHITLHS----LPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRPLMNDEGLK 456 (469)
T ss_dssp EEECSCHHHHHHHHHHCCCSEEEESCSSGGGSCTT----SCBCCCGGGEECCBSTHHHHHHTEEEEEEEECCSSCCGGGG
T ss_pred EEECCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCC
T ss_conf 99888999999999858705599808877777889----88178564655756459999996281599987756544445
Q ss_pred CCCCCCC
Q ss_conf 7699999
Q 030638 168 WEIPPST 174 (174)
Q Consensus 168 ~~~~~~~ 174 (174)
+.|||-+
T Consensus 457 ~~yppy~ 463 (469)
T 3sza_A 457 VRYPPSP 463 (469)
T ss_dssp GGSSSCC
T ss_pred CCCCCCC
T ss_conf 1129998
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=1.00 E-value=1 Score=201.60 Aligned_cols=148 Identities=20% Similarity=0.281 Sum_probs=121.7
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++.+ +|+++++||..... ..+.|++|||+... + ++|++++||+||||++|++|+|+ ||+|++
T Consensus 356 ~~~i~~a~~-~Ga~v~~gG~~~~~----~~g~~~~PTvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 422 (528)
T 3u4j_A 356 HSYVTAGIT-SGAELLLGGERIGR----EAGLYYAPTVFAGV-T-----PDMSIAREEIFGPVLSTLTFKTA--DEAVAL 422 (528)
T ss_dssp HHHHHHHHH-TTCEEEECCSEECT----TTSCEECCEEEESC-C-----TTSHHHHSCCCSSEEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCCC----CCCCEECCEEEECC-C-----CCCCCCCCEEECCEEEEEEECCH--HHHHHH
T ss_conf 999999997-79999947876777----88757566477348-9-----99812166014627999996999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEE
Q ss_conf 863999826999449988999999773355366366873357887877799889999847976--678540010139998
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIY 159 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~ 159 (174)
+|+++|||+++|||+|.+++.++++++++|.+|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.+
T Consensus 423 aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN--~~~~~~~~----~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~ 496 (528)
T 3u4j_A 423 ANATEFGLSASVWSTNLETALQTIRRIRAGRCWIN--SVIDGTPE----LPIGGYKKSGLGRELGRYGFDEYSQFKGVHV 496 (528)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEES--CCSCCCTT----SCBCCSGGGEESCBSTTHHHHHTEEEEEEEE
T ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCEEEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEEE
T ss_conf 85699884799986899999999986873079989--98888888----8717827677785765999998605489999
Q ss_pred CCCCCCCCCC
Q ss_conf 3588888776
Q 030638 160 DYGPVPGNWE 169 (174)
Q Consensus 160 ~~~~~~~~~~ 169 (174)
+.+. +..|.
T Consensus 497 ~~~~-~~~~~ 505 (528)
T 3u4j_A 497 TLGR-PAPWF 505 (528)
T ss_dssp ESSC-CCCSC
T ss_pred ECCC-CCCCC
T ss_conf 0788-78853
No 7
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=1.00 E-value=1 Score=201.54 Aligned_cols=139 Identities=17% Similarity=0.195 Sum_probs=116.5
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.++++++.+ +|+++++||.... ++|++|||+... + ++|++++||+||||++|++|+|+ ||++++
T Consensus 363 ~~~i~~a~~-~Ga~v~~gG~~~~-------g~~~~PTvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 426 (504)
T 3ek1_A 363 KAHIEDAVS-KGAKLITGGKELG-------GLFFEPGILTGV-T-----SDMLVAKEETFGPLAPLFAFDTE--EEVIAQ 426 (504)
T ss_dssp HHHHHHHHH-TTCEEEECCCEEE-------TTEECCEEEEEE-C-----TTSGGGTSCCCSSEEEEEEECCH--HHHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCC-------CCEECCEEEECC-C-----CCCHHHCCCCCCCEEEEEEECCH--HHHHHH
T ss_conf 999999997-7999996786688-------846778687448-9-----86753426454727999996999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEEE
Q ss_conf 863999826999449988999999773355366366873357887877799889999847976--678540010139998
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREIIY 159 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~~ 159 (174)
+|+++|||+++|||+|.+++.++++++++|++|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.+
T Consensus 427 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN--~~~~~~~~----~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~ 500 (504)
T 3ek1_A 427 ANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHN--TGLISNEV----APFGGVKQSGLGREGSKYGIEEYLETKYICS 500 (504)
T ss_dssp HHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEES--CSCCCCSS----SCBCCSGGGEESCBSTTTSGGGGEEEEEEEE
T ss_pred HHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCCHHHHHHHHCEEEEEE
T ss_conf 85799981799986999999999986771759989--98777889----9827857473787775999998523389999
Q ss_pred CCC
Q ss_conf 358
Q 030638 160 DYG 162 (174)
Q Consensus 160 ~~~ 162 (174)
+++
T Consensus 501 ~~g 503 (504)
T 3ek1_A 501 AYK 503 (504)
T ss_dssp ECC
T ss_pred ECC
T ss_conf 557
No 8
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=1.00 E-value=1 Score=201.13 Aligned_cols=141 Identities=18% Similarity=0.205 Sum_probs=117.9
Q ss_pred HHHHHHHHCCCCC-EEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHH
Q ss_conf 8889987749996-999377436788888775324417997153011037876553101230424699941899778999
Q 030638 2 LEHMNKLLKVPGS-KLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (174)
Q Consensus 2 ~~~i~~~~~~~g~-~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~ 80 (174)
.++++++.+ +|+ ++++||...+. .+.|++|||+... + ++|++++||+||||++|++|+|+ ||+|+
T Consensus 355 ~~~i~~a~~-~Ga~~v~~gG~~~~~-----~g~~~~PTvl~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~ 420 (498)
T 4f3x_A 355 ASFVERAAD-QKHIEITTGGRTGSD-----EGFFFQPTVVAGA-T-----QEDEIVRREVFGPVVSVTRFTGK--DDAVA 420 (498)
T ss_dssp HHHHHHHHH-STTCEEEECCSBCCS-----SSCCBCCEEEESC-C-----TTSHHHHSCCCSSEEEEEEECTT--SCHHH
T ss_pred HHHHHHHHH-CCCCEEEECCCCCCC-----CCCEECCEEEECC-C-----CCCHHHCCCEECCEEEEEEECCH--HHHHH
T ss_conf 999999987-899789978965789-----9757777786058-9-----98852277216868999996999--99999
Q ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEE
Q ss_conf 9863999826999449988999999773355366366873357887877799889999847976--67854001013999
Q 030638 81 ALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREII 158 (174)
Q Consensus 81 ~an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~ 158 (174)
++|+++|||+++|||+|.+++.++++++++|++|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.
T Consensus 421 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN--~~~~~~~~----~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 421 WANDSDYGLASSVWTKDISKAMRAASRLQYGCTWIN--THFMLTNE----MPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp HHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEES--CCSCCCTT----SCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEE
T ss_conf 985699982599988999999999986873559986--98888888----876884767768666499999962558999
Q ss_pred ECCC
Q ss_conf 8358
Q 030638 159 YDYG 162 (174)
Q Consensus 159 ~~~~ 162 (174)
++++
T Consensus 495 ~~~g 498 (498)
T 4f3x_A 495 INHG 498 (498)
T ss_dssp EECC
T ss_pred EECC
T ss_conf 9579
No 9
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=1.00 E-value=1 Score=199.80 Aligned_cols=138 Identities=17% Similarity=0.205 Sum_probs=115.8
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEE-CCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHH
Q ss_conf 8889987749996999377436788888775324417997-153011037876553101230424699941899778999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVF-VPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLN 80 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~-v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~ 80 (174)
.++++++++ +|+++++||..... .++|++|||+. ++ ++|++++||+||||++|++|+|+ ||+|+
T Consensus 343 ~~~i~~a~~-~Ga~v~~gG~~~~~-----~g~~~~PTvl~~v~-------~~~~i~~eEiFGPVl~v~~~~~~--deAi~ 407 (484)
T 3ifg_A 343 ESHIADALA-KGASLMTGGKRHAL-----GHGFFEPTVLTGVK-------PDMDVAKEETFGPLAPLFRFASE--EELVR 407 (484)
T ss_dssp HHHHHHHHH-TTCEEEECCSBCTT-----CTTCBCCEEEEEEC-------TTSGGGTSCCCSSEEEEEEECCH--HHHHH
T ss_pred HHHHHHHHH-CCCEEEECCCCCCC-----CCCEECCEEEECCC-------CCCHHHCCEEECCEEEEEEECCH--HHHHH
T ss_conf 999999997-79999978974689-----98567678872589-------87753377546867999996999--99999
Q ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCH--HHHHHHCEECEEEE
Q ss_conf 9863999826999449988999999773355366366873357887877799889999847976--67854001013999
Q 030638 81 ALERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIGTP--EAIKLVWSSHREII 158 (174)
Q Consensus 81 ~an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G~~--~~~~~~~~~~k~v~ 158 (174)
++|+++|||+++|||+|.+++.++++++++|++|+| +.....+. .||||+|.||+||+ ..+++.|++.|+|.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN--~~~~~~~~----~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~ 481 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGIN--TGLISNEV----APFGGVKQSGLGREGSHYGIDDYVVIKYLC 481 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEES--CSCCCCSS----SCBCCEETTEECCBSTTTTTGGGEEEEEEE
T ss_pred HHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC--CCCCCCCC----CCCCCCCCCCCCCCCHHHHHHHHHCEEEEE
T ss_conf 996799983699988899999999986886669986--99777888----872882767578776299999851447999
Q ss_pred EC
Q ss_conf 83
Q 030638 159 YD 160 (174)
Q Consensus 159 ~~ 160 (174)
+.
T Consensus 482 ~~ 483 (484)
T 3ifg_A 482 VA 483 (484)
T ss_dssp EE
T ss_pred EE
T ss_conf 96
No 10
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=1.00 E-value=1 Score=198.62 Aligned_cols=146 Identities=16% Similarity=0.117 Sum_probs=118.3
Q ss_pred HHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHCCCCCCCCCCEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 88899877499969993774367888887753244179971530110378765531012304246999418997789999
Q 030638 2 LEHMNKLLKVPGSKLLFGGEELKNHSIPSIYGALKPTAVFVPLEEILKDGNYELVTREIFGPFQIVTEYKQDQLPLVLNA 81 (174)
Q Consensus 2 ~~~i~~~~~~~g~~il~GG~~~~~~~~~~~~g~i~PTii~v~~~~~~~~~~~~il~EEiFGPv~~I~~y~~~~~dE~i~~ 81 (174)
.+++++..+ +|+++++||...+. .++.|++|||+... + +++++++||+||||++|++|+|+ ||+|++
T Consensus 318 ~~~i~~a~~-~ga~v~~Gg~~~~~----~~g~~~~Ptv~~~v-~-----~~~~i~~eEiFGPVl~v~~~~~~--deAi~~ 384 (474)
T 4h7n_A 318 NDHILDAVE-KGAVIHCGGKVEEL----GGGWWCRPTVMTNV-N-----HSMKVMTEETFGPIMPVMPFPDV--EEAVYL 384 (474)
T ss_dssp HHHHHHHHH-TTCEEEECCCCEEE----TTEEECCCEEEESC-C-----TTSGGGTSCCCSSEEEEEEESSH--HHHHHH
T ss_pred HHHHHHHHH-HCCEECCCCCCCCC----CCCCCCCCEEEEEE-C-----CCCCCCCCCCCCCEEEEEEECCH--HHHHHH
T ss_conf 999999986-17543047866556----88765686368752-1-----44422554201757999997999--999999
Q ss_pred HHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CH--HHHHHHCEECEEEE
Q ss_conf 8639998269994499889999997733553663668733578878777998899998479-76--67854001013999
Q 030638 82 LERMHAHLTAAVVSNDPLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPSGDPRGAGIG-TP--EAIKLVWSSHREII 158 (174)
Q Consensus 82 an~~~~gLta~Vft~d~~~~~~v~~~~~~G~v~~n~~~~~~~~~~~~~f~p~gg~k~SG~G-~~--~~~~~~~~~~k~v~ 158 (174)
+|+++|||+++|||+|.+++.++++++++|++|+| +..+..... ..||||.|+||+| ++ ..+++.|++.|+|.
T Consensus 385 aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN--~~~~~~~~~--~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~ 460 (474)
T 4h7n_A 385 ANDTIYGLSAAVFAGSEDEALKVARQLNAGAISIN--DAALTAMMH--EGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFL 460 (474)
T ss_dssp HHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEES--SSCGGGTCC--CSCCCCCGGGEESCCSSTTHHHHTTEEEEEEE
T ss_pred HHCCCCCCEEEEEECCHHHHHHHHHHCCEEEEEEC--CCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHCEEEEEE
T ss_conf 97699987499992899999999974875189987--987667768--89989938789998736599999747089999
Q ss_pred ECCCCC
Q ss_conf 835888
Q 030638 159 YDYGPV 164 (174)
Q Consensus 159 ~~~~~~ 164 (174)
++....
T Consensus 461 ~~~~~~ 466 (474)
T 4h7n_A 461 IKTNST 466 (474)
T ss_dssp EECSSS
T ss_pred ECCCCC
T ss_conf 988898
Done!