BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030644
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49627|ISU1_ARATH Iron-sulfur cluster assembly protein 1 OS=Arabidopsis thaliana
GN=ISU1 PE=2 SV=1
Length = 167
Score = 248 bits (632), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/169 (73%), Positives = 139/169 (82%), Gaps = 13/169 (7%)
Query: 1 MLRLGSKRLL----RQATAAAVAAPRPVQVAAMPRLYHENVIDHYNNPRNVGSFEKNDAT 56
ML+ +K+ L RQ+T +V + R YHENVIDHY+NPRNVGSF+KND
Sbjct: 2 MLKQAAKKALGLTSRQSTPWSVG---------ILRTYHENVIDHYDNPRNVGSFDKNDPN 52
Query: 57 VGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEV 116
VGTGLVGAPACGDVMKLQIKVDE+TGQIVDA FKTFGCGSAIASSSVATEWVKGK M++V
Sbjct: 53 VGTGLVGAPACGDVMKLQIKVDEKTGQIVDARFKTFGCGSAIASSSVATEWVKGKAMEDV 112
Query: 117 LSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTKPSAASEA 165
L+IKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY+ KR K + A+ A
Sbjct: 113 LTIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYKEKRVKTNGAAAA 161
>sp|O81433|ISU3_ARATH Iron-sulfur cluster assembly protein 3 OS=Arabidopsis thaliana
GN=ISU3 PE=2 SV=1
Length = 171
Score = 227 bits (578), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 128/153 (83%), Gaps = 4/153 (2%)
Query: 9 LLRQATAAA---VAAPRPVQVAAMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAP 65
+LRQ T A +A+ P + RLYH NVIDHY+NPRNVGSF+KND VGTGLVGAP
Sbjct: 1 MLRQTTKRAFLGLASQNPTPFPVVSRLYHPNVIDHYDNPRNVGSFDKNDPNVGTGLVGAP 60
Query: 66 ACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIA 125
CGDVMKLQ+K D +GQI+DA FKTFGCGSAIA+SSVATEWVKGK ++EVL+IKN++IA
Sbjct: 61 QCGDVMKLQVKFDG-SGQIIDAKFKTFGCGSAIAASSVATEWVKGKSVEEVLTIKNSQIA 119
Query: 126 KHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRTK 158
KHLSLPPVKLHCSMLAEDAIKAA+K+Y+ K+ K
Sbjct: 120 KHLSLPPVKLHCSMLAEDAIKAAIKNYKEKQDK 152
>sp|Q9D7P6|ISCU_MOUSE Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Mus
musculus GN=Iscu PE=1 SV=1
Length = 168
Score = 216 bits (549), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 127/154 (82%), Gaps = 3/154 (1%)
Query: 5 GSKRLLRQATAAAVAAPR-PVQVAAMP-RLYHENVIDHYNNPRNVGSFEKNDATVGTGLV 62
G+ RL R A+A + +PR P + + P RLYH+ V+DHY NPRNVGS +K VGTGLV
Sbjct: 6 GAGRLRRAASALLLRSPRLPARELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLV 65
Query: 63 GAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNT 122
GAPACGDVMKLQI+VDE+ G+IVDA FKTFGCGSAIASSS+ATEWVKGK ++E L+IKNT
Sbjct: 66 GAPACGDVMKLQIQVDEK-GKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNT 124
Query: 123 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKR 156
+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K+
Sbjct: 125 DIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQ 158
>sp|Q9H1K1|ISCU_HUMAN Iron-sulfur cluster assembly enzyme ISCU, mitochondrial OS=Homo
sapiens GN=ISCU PE=1 SV=2
Length = 167
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/154 (69%), Positives = 127/154 (82%), Gaps = 3/154 (1%)
Query: 5 GSKRLLRQATAAAVAAPR-PVQVAAMP-RLYHENVIDHYNNPRNVGSFEKNDATVGTGLV 62
G+ RL R A+A + +PR P + + P RLYH+ V+DHY NPRNVGS +K VGTGLV
Sbjct: 5 GAFRLRRAASALLLRSPRLPARELSAPARLYHKKVVDHYENPRNVGSLDKTSKNVGTGLV 64
Query: 63 GAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNT 122
GAPACGDVMKLQI+VDE+ G+IVDA FKTFGCGSAIASSS+ATEWVKGK ++E L+IKNT
Sbjct: 65 GAPACGDVMKLQIQVDEK-GKIVDARFKTFGCGSAIASSSLATEWVKGKTVEEALTIKNT 123
Query: 123 EIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKR 156
+IAK L LPPVKLHCSMLAEDAIKAA+ DY+ K+
Sbjct: 124 DIAKELCLPPVKLHCSMLAEDAIKAALADYKLKQ 157
>sp|Q6BGU0|ISU1_DEBHA Iron sulfur cluster assembly protein 1, mitochondrial
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=ISU1 PE=3 SV=1
Length = 179
Score = 213 bits (543), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 125/169 (73%), Gaps = 9/169 (5%)
Query: 6 SKRLLRQATAAAVAAPRPVQVAAMP-------RLYHENVIDHYNNPRNVGSFEKNDATVG 58
S+ LR A A A P +V MP RLYHE V+DHY+NPRNVG+ K D VG
Sbjct: 3 SRSFLRLANPARRAMPAVKRVNMMPSMALPTKRLYHEKVLDHYSNPRNVGTLNKLDVDVG 62
Query: 59 TGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLS 118
TGLVGAPACGDVM+LQI+VD+ETG I D FKTFGCGSAIASSS TE VKGK ++E +
Sbjct: 63 TGLVGAPACGDVMRLQIQVDDETGVIKDVKFKTFGCGSAIASSSYLTELVKGKTIEEAVK 122
Query: 119 IKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRT--KPSAASEA 165
IKNT IAK LSLPPVKLHCSMLAEDAIK+AVKDY +KR+ +P+ EA
Sbjct: 123 IKNTAIAKELSLPPVKLHCSMLAEDAIKSAVKDYRSKRSVKQPTLGPEA 171
>sp|Q9MAB6|ISU2_ARATH Iron-sulfur cluster assembly protein 2 OS=Arabidopsis thaliana
GN=ISU2 PE=2 SV=1
Length = 163
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/158 (67%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
Query: 9 LLRQATAAAVAAPRPVQVAAMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACG 68
+LRQ + A + + RLYHENVIDH+ NPRNVGSF +ND VGTGLVGAPACG
Sbjct: 3 MLRQTSRKAYLGLQASPLGLGRRLYHENVIDHFENPRNVGSFNRNDPNVGTGLVGAPACG 62
Query: 69 DVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL 128
D+M LQIKVD+ +GQI+D FKTFGCGSAIASSSVA+EW+KGK + EV++IKN EIAKHL
Sbjct: 63 DLMSLQIKVDD-SGQIIDTRFKTFGCGSAIASSSVASEWIKGKTLDEVMTIKNAEIAKHL 121
Query: 129 SLPPVKLHCSMLAEDAIKAAVKDYEAKRTKPSAASEAE 166
LPPVKLHCSMLAEDAIK+AV+DY+ K+ K +AA+ E
Sbjct: 122 RLPPVKLHCSMLAEDAIKSAVRDYKEKQAKTNAAAAEE 159
>sp|Q6CRQ9|ISU1_KLULA Iron sulfur cluster assembly protein 1, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ISU1 PE=3
SV=1
Length = 180
Score = 202 bits (514), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 106/126 (84%)
Query: 31 RLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFK 90
R YH VIDHY NPRNVGS +KN VGTGLVGAPACGDVMKLQI+V++ETG I + FK
Sbjct: 49 RFYHPKVIDHYTNPRNVGSLDKNLPNVGTGLVGAPACGDVMKLQIQVNDETGVIENVKFK 108
Query: 91 TFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVK 150
TFGCGSAIASSS TE V+GK +++ IKNTEIA+ LSLPPVKLHCSMLAEDAIKAA+K
Sbjct: 109 TFGCGSAIASSSYMTELVRGKTLEDAAKIKNTEIARELSLPPVKLHCSMLAEDAIKAAIK 168
Query: 151 DYEAKR 156
DY+AKR
Sbjct: 169 DYQAKR 174
>sp|Q6CFQ0|ISU1_YARLI Iron sulfur cluster assembly protein 1, mitochondrial OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=ISU1 PE=3 SV=1
Length = 181
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/152 (65%), Positives = 110/152 (72%), Gaps = 10/152 (6%)
Query: 14 TAAAVAAPRPVQVAAMP---------RLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGA 64
+A +A RP A M R YHE V+DHYNNPRNVGS KND VGTGLVGA
Sbjct: 9 SAGLLARARPTTTAVMSPMTPLAISRRGYHEKVLDHYNNPRNVGSMNKNDEDVGTGLVGA 68
Query: 65 PACGDVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEI 124
PACGDVMKLQI+VD+ G I D FKTFGCGSAIASSS TE V+GK + E IKNT I
Sbjct: 69 PACGDVMKLQIRVDDN-GVIQDVKFKTFGCGSAIASSSYVTELVRGKSLAEAGKIKNTVI 127
Query: 125 AKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKR 156
AK LSLPPVKLHCSMLAEDAIK+A+ DY +KR
Sbjct: 128 AKELSLPPVKLHCSMLAEDAIKSAISDYNSKR 159
>sp|Q03020|ISU1_YEAST Iron sulfur cluster assembly protein 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ISU1 PE=1 SV=1
Length = 165
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 98/154 (63%), Positives = 113/154 (73%), Gaps = 7/154 (4%)
Query: 17 AVAAPRPVQVAAM-------PRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGD 69
A+ A RPV + RLYH VI+HY +PRNVGS +K VGTGLVGAPACGD
Sbjct: 12 ALMAIRPVNAMGVLRASSITKRLYHPKVIEHYTHPRNVGSLDKKLPNVGTGLVGAPACGD 71
Query: 70 VMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLS 129
VM+LQIKV++ TG I D FKTFGCGSAIASSS TE V+G + + IKNTEIAK LS
Sbjct: 72 VMRLQIKVNDSTGVIEDVKFKTFGCGSAIASSSYMTELVQGMTLDDAAKIKNTEIAKELS 131
Query: 130 LPPVKLHCSMLAEDAIKAAVKDYEAKRTKPSAAS 163
LPPVKLHCSMLAEDAIKAA+KDY++KR P+ S
Sbjct: 132 LPPVKLHCSMLAEDAIKAAIKDYKSKRNTPTMLS 165
>sp|Q75C07|ISU1_ASHGO Iron sulfur cluster assembly protein 1, mitochondrial OS=Ashbya
gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 /
NRRL Y-1056) GN=ISU1 PE=3 SV=1
Length = 154
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/148 (65%), Positives = 110/148 (74%), Gaps = 4/148 (2%)
Query: 10 LRQATAAAVAAPRPV-QVAAMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACG 68
RQ A V RPV + R YH VIDHY NPRNVG+ +K VGTGLVGAPACG
Sbjct: 4 FRQTATAIV---RPVGTIGYARRCYHPKVIDHYTNPRNVGTLDKKLTNVGTGLVGAPACG 60
Query: 69 DVMKLQIKVDEETGQIVDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL 128
DVM+LQI+VD+ TG I + FKTFGCGSAIASSS TE V+GK + + IKNTEIA+ L
Sbjct: 61 DVMRLQIQVDDSTGVIENVKFKTFGCGSAIASSSYMTELVRGKTLADAEKIKNTEIAREL 120
Query: 129 SLPPVKLHCSMLAEDAIKAAVKDYEAKR 156
SLPPVKLHCSMLAEDAIKAA+KDY +KR
Sbjct: 121 SLPPVKLHCSMLAEDAIKAAIKDYRSKR 148
>sp|Q12056|ISU2_YEAST Iron sulfur cluster assembly protein 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ISU2 PE=1 SV=1
Length = 156
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 107/130 (82%)
Query: 28 AMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDA 87
A RLYH VIDHY NPRNVGS +K+ A VGTG+VGAPACGDV+KLQI+V++++G I +
Sbjct: 22 AAKRLYHPKVIDHYTNPRNVGSMDKSLANVGTGIVGAPACGDVIKLQIQVNDKSGIIENV 81
Query: 88 CFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKA 147
FKTFGCGSAIASSS TE V+G + E + IKNTEIAK LSLPPVKLHCSMLAEDAIKA
Sbjct: 82 KFKTFGCGSAIASSSYMTELVRGMSLDEAVKIKNTEIAKELSLPPVKLHCSMLAEDAIKA 141
Query: 148 AVKDYEAKRT 157
A+KDY+ KR
Sbjct: 142 AIKDYKTKRN 151
>sp|P0ACD7|NIFU_SHIFL NifU-like protein OS=Shigella flexneri GN=nifU PE=3 SV=1
Length = 128
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E VIDHY NPRNVGSF+ ND VG+G+VGAPACGDVMKLQIKV++E G I DA FKT+
Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK + E +IKNT+IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121
Query: 153 EAKR 156
++KR
Sbjct: 122 KSKR 125
>sp|P0ACD4|NIFU_ECOLI NifU-like protein OS=Escherichia coli (strain K12) GN=nifU PE=1
SV=1
Length = 128
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E VIDHY NPRNVGSF+ ND VG+G+VGAPACGDVMKLQIKV++E G I DA FKT+
Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK + E +IKNT+IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121
Query: 153 EAKR 156
++KR
Sbjct: 122 KSKR 125
>sp|P0ACD5|NIFU_ECOL6 NifU-like protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=nifU PE=3 SV=1
Length = 128
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E VIDHY NPRNVGSF+ ND VG+G+VGAPACGDVMKLQIKV++E G I DA FKT+
Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK + E +IKNT+IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121
Query: 153 EAKR 156
++KR
Sbjct: 122 KSKR 125
>sp|P0ACD6|NIFU_ECO57 NifU-like protein OS=Escherichia coli O157:H7 GN=nifU PE=1 SV=1
Length = 128
Score = 193 bits (490), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E VIDHY NPRNVGSF+ ND VG+G+VGAPACGDVMKLQIKV++E G I DA FKT+
Sbjct: 3 YSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDE-GIIEDARFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK + E +IKNT+IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADY 121
Query: 153 EAKR 156
++KR
Sbjct: 122 KSKR 125
>sp|O51885|NIFU_BUCAP NifU-like protein OS=Buchnera aphidicola subsp. Schizaphis graminum
(strain Sg) GN=nifU PE=3 SV=1
Length = 128
Score = 191 bits (485), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 87/126 (69%), Positives = 106/126 (84%), Gaps = 1/126 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y + V+DHY NPRNVGSF +D+ VG+GLVGAPACGDVMKLQIKV+E+ G I DACFKT+
Sbjct: 3 YSKKVMDHYENPRNVGSFSNSDSNVGSGLVGAPACGDVMKLQIKVNEQ-GIIEDACFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEW+KGK + E +IKNT I + L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWIKGKSITEAEAIKNTSIVEELELPPVKIHCSILAEDAIKAAISDY 121
Query: 153 EAKRTK 158
++K+ K
Sbjct: 122 KSKKNK 127
>sp|Q6FJY3|ISU1_CANGA Iron sulfur cluster assembly protein 1, mitochondrial OS=Candida
glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC
0622 / NRRL Y-65) GN=ISU1 PE=3 SV=1
Length = 213
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 103/127 (81%)
Query: 31 RLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFK 90
R+YH VI+HY +PRNVGS +K VGTGLVGAPACGDVM+LQIKV+++TG I D FK
Sbjct: 81 RMYHPKVIEHYTHPRNVGSMDKTLPNVGTGLVGAPACGDVMRLQIKVNDKTGVIEDVKFK 140
Query: 91 TFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVK 150
TFGCGSAIASSS TE V G + + IKNT IAK LSLPPVKLHCSMLAEDAIKAA+K
Sbjct: 141 TFGCGSAIASSSYMTELVHGMTLDDAAKIKNTTIAKELSLPPVKLHCSMLAEDAIKAAIK 200
Query: 151 DYEAKRT 157
DY++KRT
Sbjct: 201 DYKSKRT 207
>sp|P57658|NIFU_BUCAI NifU-like protein OS=Buchnera aphidicola subsp. Acyrthosiphon pisum
(strain APS) GN=nifU PE=3 SV=1
Length = 127
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y + V+DHY NPRNVGSF D VG+GLVGAPACGDVMKLQIKV+E+ G I DACFKT+
Sbjct: 3 YSKKVMDHYENPRNVGSFSSTDLNVGSGLVGAPACGDVMKLQIKVNEK-GIIEDACFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK ++E SIKNT I + L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWVKGKSIEEAESIKNTTIVEELDLPPVKIHCSILAEDAIKAAISDY 121
Query: 153 EAKR 156
+ K+
Sbjct: 122 KRKK 125
>sp|Q57074|NIFU_HAEIN NifU-like protein OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=nifU PE=1 SV=2
Length = 126
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 106/124 (85%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E VIDHY NPRNVGS +K D+ VGTG+VGAPACGDVM+LQIKVD+ G I DA FKT+
Sbjct: 3 YSEKVIDHYENPRNVGSLDKKDSNVGTGMVGAPACGDVMQLQIKVDD-NGIIEDAKFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEWVKGK ++E +IKN++IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLITEWVKGKSLEEAGAIKNSQIAEELELPPVKVHCSILAEDAIKAAIADY 121
Query: 153 EAKR 156
+AK+
Sbjct: 122 KAKQ 125
>sp|Q9ZD61|NIFU_RICPR NifU-like protein OS=Rickettsia prowazekii (strain Madrid E)
GN=nifU PE=3 SV=1
Length = 131
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 91/125 (72%), Positives = 103/125 (82%), Gaps = 3/125 (2%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKV-DEETGQIVDACFKT 91
Y + VIDHY NPRNVGS +K VGTGLVGAPACGDVMKLQI+V D+E I DA FKT
Sbjct: 3 YSKKVIDHYENPRNVGSLDKKKKNVGTGLVGAPACGDVMKLQIEVGDDEI--ITDAKFKT 60
Query: 92 FGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKD 151
FGCGSAIASSS+ TEW+KGK +++ IKNTEIAK LSLPPVKLHCS+LAEDAIKAA+ D
Sbjct: 61 FGCGSAIASSSLVTEWIKGKSVEDAKEIKNTEIAKELSLPPVKLHCSLLAEDAIKAAIAD 120
Query: 152 YEAKR 156
Y+ KR
Sbjct: 121 YKQKR 125
>sp|B0YLW7|ISU1_TRAHO Iron sulfur cluster assembly protein 1 OS=Trachipleistophora
hominis GN=ISU1 PE=3 SV=1
Length = 138
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 103/124 (83%), Gaps = 2/124 (1%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
YH +VIDH+ NPRNVGS++K+ VGTGLVGAPACGDVMKLQIKV+ + I DA F+TF
Sbjct: 15 YHSSVIDHFENPRNVGSYDKSANDVGTGLVGAPACGDVMKLQIKVENDI--IKDAKFRTF 72
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ATEW+KGK + + L I N +IAK LSLPPVKLHCSMLAEDAIKAA+ DY
Sbjct: 73 GCGSAIASSSLATEWIKGKSISDSLKITNKDIAKKLSLPPVKLHCSMLAEDAIKAAISDY 132
Query: 153 EAKR 156
+ K
Sbjct: 133 QKKN 136
>sp|Q89A18|NIFU_BUCBP NifU-like protein OS=Buchnera aphidicola subsp. Baizongia pistaciae
(strain Bp) GN=nifU PE=3 SV=1
Length = 126
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 103/124 (83%), Gaps = 1/124 (0%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y + VIDHY NPRNVGSF+ DA VG+GLVGAPACGDVMKLQIKV++ G I DACFKT+
Sbjct: 3 YSKKVIDHYENPRNVGSFKTIDANVGSGLVGAPACGDVMKLQIKVNK-NGIIQDACFKTY 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDY 152
GCGSAIASSS+ TEW+KGK + E +IKNT IA+ L LPPVK+HCS+LAEDAIKAA+ DY
Sbjct: 62 GCGSAIASSSLVTEWIKGKSLIEAENIKNTNIAEELDLPPVKIHCSILAEDAIKAAITDY 121
Query: 153 EAKR 156
+ K
Sbjct: 122 KNKN 125
>sp|Q9UTC6|ISU1_SCHPO Iron sulfur cluster assembly protein 1, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=isu1 PE=1 SV=1
Length = 192
Score = 184 bits (467), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/129 (67%), Positives = 102/129 (79%), Gaps = 1/129 (0%)
Query: 31 RLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFK 90
R+YH+NV+DHYNNPRNVG+ K D VG GLVGAPACGDVM+L I+V+++ G I D FK
Sbjct: 52 RMYHKNVLDHYNNPRNVGTLPKGDPDVGIGLVGAPACGDVMRLAIRVNKD-GVIEDVKFK 110
Query: 91 TFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVK 150
TFGCGSAIASSS T VKG ++E IKNT+IAK L LPPVKLHCSMLAEDAIK+AVK
Sbjct: 111 TFGCGSAIASSSYVTTMVKGMTLEEASKIKNTQIAKELCLPPVKLHCSMLAEDAIKSAVK 170
Query: 151 DYEAKRTKP 159
Y +K+ P
Sbjct: 171 HYRSKQLTP 179
>sp|Q8SSM2|ISU1_ENCCU Iron sulfur cluster assembly protein 1 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ISU1 PE=3 SV=1
Length = 140
Score = 179 bits (455), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 106/136 (77%), Gaps = 2/136 (1%)
Query: 25 QVAAMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQI 84
+++ + Y +V+DH+ NPRNVGS +K D VGTG+VGAPACGDVMKLQIKV ++ I
Sbjct: 6 ELSGITGKYDSSVVDHFENPRNVGSLDKTDPRVGTGMVGAPACGDVMKLQIKVGKDN-VI 64
Query: 85 VDACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLSLPPVKLHCSMLAEDA 144
DA FKTFGCGSAIASSS+ATEW+K K + E L I N +IAK LSLPP+KLHCSMLAEDA
Sbjct: 65 EDAKFKTFGCGSAIASSSLATEWIKKKTIDESLKISNRDIAKKLSLPPIKLHCSMLAEDA 124
Query: 145 IKAAVKDYEAKRTKPS 160
IK A+KD+ + KPS
Sbjct: 125 IKMAIKDF-LDKNKPS 139
>sp|P05340|NIFU_AZOVI Nitrogen fixation protein NifU OS=Azotobacter vinelandii GN=nifU
PE=3 SV=2
Length = 312
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 85/124 (68%), Gaps = 4/124 (3%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E V +H+ NP+N G+ E +A G VG+ +CGD ++L +KVD ET I+DA F+TF
Sbjct: 4 YSEKVKEHFYNPKNAGAVEGANAI---GDVGSLSCGDALRLTLKVDPETDVILDAGFQTF 60
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL-SLPPVKLHCSMLAEDAIKAAVKD 151
GCGSAIASSS TE VKG + E L I N +IA +L LPP K+HCS++ +A++AAV +
Sbjct: 61 GCGSAIASSSALTEMVKGLTLDEALKISNQDIADYLDGLPPEKMHCSVMGREALQAAVAN 120
Query: 152 YEAK 155
Y +
Sbjct: 121 YRGE 124
>sp|O67045|NIFU_AQUAE NifU-like protein OS=Aquifex aeolicus (strain VF5) GN=nifU PE=1
SV=1
Length = 157
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 84/133 (63%), Gaps = 4/133 (3%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y+E V+DH+ NPRNVG E DA G G G PACGD M IKV+ E I D FKTF
Sbjct: 5 YNEKVLDHFLNPRNVGVLE--DAN-GVGQCGNPACGDAMLFTIKVNPENDVIEDVRFKTF 61
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL-SLPPVKLHCSMLAEDAIKAAVKD 151
GCGSAIA SS+ TE VKGK +Q L++ +I + L LPP K+HC+ L + + A+KD
Sbjct: 62 GCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKD 121
Query: 152 YEAKRTKPSAASE 164
Y K+ + AS+
Sbjct: 122 YLMKQGRVEEASK 134
>sp|P23121|NIFU_AZOCH Nitrogen fixation protein NifU OS=Azotobacter chroococcum mcd 1
GN=nifU PE=3 SV=1
Length = 309
Score = 116 bits (290), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E V +H+ NP+N G+ E +A G VG+ +CGD ++L +KVD ET I+DA F+TF
Sbjct: 4 YSEKVKEHFYNPKNAGAVEGANAI---GDVGSLSCGDRLRLTLKVDPETDVILDAGFQTF 60
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLS-LPPVKLHCSMLAEDAIKAAVKD 151
GCGSAIASSS TE VKG + + L I N +IA L LP K+HCS++ + ++AAV +
Sbjct: 61 GCGSAIASSSALTEMVKGADLDDALKISNRDIAHFLGRLPREKMHCSVMGRERLQAAVAN 120
Query: 152 YEAKRTK 158
Y + +
Sbjct: 121 YRGEELR 127
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 91/138 (65%), Gaps = 7/138 (5%)
Query: 33 YHENVIDHYNNPRNVGSFEKND---ATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACF 89
Y + V++ + +P+N G E+N V TG VG+ ACGD ++L IKV+ E+ +IVD+ F
Sbjct: 4 YTDKVLELFYDPKNQGVIEENGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63
Query: 90 KTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL-SLPPVKLHCSMLAEDAIKAA 148
+TFGC SAIASSS TE +KG + E L + N +IA +L LP K+HCS++ ++A++AA
Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123
Query: 149 VKDYEAKRTKPSAASEAE 166
+ +Y R P AA + +
Sbjct: 124 IYNY---RGIPLAAHDED 138
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 89/138 (64%), Gaps = 7/138 (5%)
Query: 33 YHENVIDHYNNPRNVGSFEKND---ATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACF 89
Y + V++ + +P+N G E N V TG VG+ ACGD ++L IKV+ E+ +IVD+ F
Sbjct: 4 YTDKVLELFYDPKNQGVIEDNGEPGVKVATGEVGSIACGDALRLHIKVEVESDKIVDSRF 63
Query: 90 KTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL-SLPPVKLHCSMLAEDAIKAA 148
+TFGC SAIASSS TE +KG + E L + N +IA +L LP K+HCS++ ++A++AA
Sbjct: 64 QTFGCTSAIASSSALTEMIKGLTLDEALKVSNKDIADYLGGLPEAKMHCSVMGQEALEAA 123
Query: 149 VKDYEAKRTKPSAASEAE 166
+ +Y R P A + E
Sbjct: 124 IYNY---RGIPLATHDDE 138
>sp|P05343|NIFU_KLEPN Nitrogen fixation protein NifU OS=Klebsiella pneumoniae GN=nifU
PE=3 SV=2
Length = 274
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 81/124 (65%), Gaps = 4/124 (3%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y E V DH+ NPRN + +A G VG+ +CGD ++L ++VD ++ I +A F+TF
Sbjct: 4 YSEKVKDHFFNPRNARVVDNANAV---GDVGSLSCGDALRLMLRVDPQSEIIEEAGFQTF 60
Query: 93 GCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHL-SLPPVKLHCSMLAEDAIKAAVKD 151
GCGSAIASSS TE + G + E I N +IA +L LPP K+HCS++ ++A++AA+ +
Sbjct: 61 GCGSAIASSSALTELIIGHTLAEAGQITNQQIADYLDGLPPEKMHCSVMGQEALRAAIAN 120
Query: 152 YEAK 155
+ +
Sbjct: 121 FRGE 124
>sp|Q43909|NIFU_AZOBR Nitrogen fixation protein NifU OS=Azospirillum brasilense GN=nifU
PE=3 SV=2
Length = 310
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 80/126 (63%), Gaps = 6/126 (4%)
Query: 33 YHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTF 92
Y + V +H+ NP+N G+ ++ D G VG+ CGD +KL +KV+ + DA F+TF
Sbjct: 4 YTDKVKEHFFNPKNAGALDEAD---DVGEVGSITCGDALKLMMKVNPDQPGHRDANFQTF 60
Query: 93 GCGSAIAS-SSVATEWVKGKQMQEVLS-IKNTEIAKHL-SLPPVKLHCSMLAEDAIKAAV 149
GCGSAIAS S TE + GK + E L + N +IA++L LPP K+ CS++ +A+ AA+
Sbjct: 61 GCGSAIASLRSALTEMIIGKTVDEALGQVTNRDIAEYLGGLPPEKMDCSVMGAEALPAAI 120
Query: 150 KDYEAK 155
+++ +
Sbjct: 121 ANFKGE 126
>sp|Q1AWB1|MNMA_RUBXD Bifunctional protein NifU/MnmA OS=Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129) GN=nifU/mnmA PE=3 SV=1
Length = 488
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 29 MPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDAC 88
MP Y VI+H NPRN G G G G ACGD ++ ++V + ++ +
Sbjct: 1 MPERYGPRVIEHLVNPRNAGEV---GGPSGVGEAGNAACGDQVRFTLRVGGDL-RLQEVR 56
Query: 89 FKTFGCGSAIASSSVATEWVKGKQMQEVLSIKNTEIAKHLS--LPPVKLHCSMLAEDAIK 146
++ +GC + IA+ S E +G+ + I +I + L LPP K H + LA DA+
Sbjct: 57 YRAYGCAACIAAGSALAELAEGRSITGAAQISRGDIQEALGGPLPPGKEHGATLALDALH 116
Query: 147 AAVKDYEAKR 156
A +DY +++
Sbjct: 117 RAFEDYWSRQ 126
>sp|O32163|NIFU_BACSU NifU-like protein OS=Bacillus subtilis (strain 168) GN=nifU PE=1
SV=1
Length = 147
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 27/143 (18%)
Query: 27 AAMPRLYHENVIDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIV- 85
A + LY + ++DHY NPRN G ND+ V + P CGD ++L +K+D G IV
Sbjct: 5 ANLDTLYRQVIMDHYKNPRNKGVL--NDSIVVD--MNNPTCGDRIRLTMKLD---GDIVE 57
Query: 86 DACFKTFGCGSAIASSSVATEWVKGKQMQEVLSIK-------------------NTEIAK 126
DA F+ GC ++AS+S+ T+ +KGK ++ LS+ + E +
Sbjct: 58 DAKFEGEGCSISMASASMMTQAIKGKDIETALSMSKIFSDMMQGKEYDDSIDLGDIEALQ 117
Query: 127 HLSLPPVKLHCSMLAEDAIKAAV 149
+S P ++ C+ L+ A++ V
Sbjct: 118 GVSKFPARIKCATLSWKALEKGV 140
>sp|Q01180|NIFU_RHOSH Nitrogen fixation protein NifU OS=Rhodobacter sphaeroides GN=nifU
PE=3 SV=1
Length = 246
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 38 IDHYNNPRNVGSFEKNDATVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSA 97
+D + NPRN G E DA G G+ GD ++L +++ E G++ +A F FG A
Sbjct: 9 LDLFFNPRNAGPLEAADAV---GTAGSLEVGDAIRLMLRI--EAGRVAEARFLAFGGAHA 63
Query: 98 IASSSVATEWVKGKQMQEVLSIKNTEI 124
IA S T V G + ++ EI
Sbjct: 64 IACGSALTVLVTGLDLAAARAVTPEEI 90
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 117 LSIKNTEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDY 152
L++ N +IA L LP K+HCS++ ++A++AA+ Y
Sbjct: 2 LNVSNQDIAAFLGGLPEAKMHCSVMGQEALEAAIFKY 38
>sp|Q1RJQ6|Y327_RICBR Putative peptidyl-prolyl cis-trans isomerase RBE_0327 OS=Rickettsia
bellii (strain RML369-C) GN=RBE_0327 PE=4 SV=1
Length = 328
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 56 TVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSA 97
T+GTG VG +CG V+ + ++ + + ++ KTF GS
Sbjct: 116 TIGTGNVGPASCGHVVTVFYQISDMSNNLISEDTKTFTIGSG 157
>sp|Q9ZDD6|Y395_RICPR Putative peptidyl-prolyl cis-trans isomerase RP395 OS=Rickettsia
prowazekii (strain Madrid E) GN=RP395 PE=4 SV=1
Length = 333
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 31 RLYHENVIDHYNNPRNVGS-------------FEKNDATVGTGLVGAPACGDVMKLQIKV 77
+++ EN++ N P N F+ N T G+G +G +CG V+ + ++
Sbjct: 81 KIFFENILQPLNGPINPNDYTIEVHKDLVKTLFKIN--TFGSGNIGPASCGHVVTVFYQI 138
Query: 78 DEETGQIVDACFKTFGCGSA 97
+ ++ KTF GSA
Sbjct: 139 SDMNNNLISEDTKTFTLGSA 158
>sp|P26247|NIFU_NOSCO Nitrogen fixation protein NifU (Fragment) OS=Nostoc commune GN=nifU
PE=3 SV=1
Length = 75
Score = 32.0 bits (71), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 117 LSIKNTEIAKHLS-LPPVKLHCSMLAEDAIKAAVKDY 152
L + +IA +L LP K+HCS++ ++A++AA+ Y
Sbjct: 2 LKVSMKDIADYLGGLPEAKMHCSVMGQEALEAAIYWY 38
>sp|Q68WY2|Y383_RICTY Putative peptidyl-prolyl cis-trans isomerase RT0383 OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=RT0383 PE=4
SV=1
Length = 333
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 15/80 (18%)
Query: 31 RLYHENVIDHYNNPRNVGS-------------FEKNDATVGTGLVGAPACGDVMKLQIKV 77
+++ EN++ N P N F+ N T G+G +G +CG V+ + ++
Sbjct: 81 KVFFENILQPLNGPINPNDYTIEVHKDLVKTLFKIN--TFGSGNIGPASCGHVVTVFYQI 138
Query: 78 DEETGQIVDACFKTFGCGSA 97
+ ++ KTF GSA
Sbjct: 139 SDMNNNLISEDTKTFTLGSA 158
>sp|Q4ULV6|Y616_RICFE Putative peptidyl-prolyl cis-trans isomerase RF_0616 OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0616 PE=4
SV=1
Length = 331
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 56 TVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSA 97
T+G+G +G +CG V+ + ++ + ++ KTF GSA
Sbjct: 116 TLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSA 157
>sp|Q92I78|Y542_RICCN Putative peptidyl-prolyl cis-trans isomerase RC0542 OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=RC0542 PE=4
SV=1
Length = 331
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 56 TVGTGLVGAPACGDVMKLQIKVDEETGQIVDACFKTFGCGSA 97
T+G+G +G +CG V+ + ++ + ++ KTF GSA
Sbjct: 116 TLGSGNIGPASCGHVVTVFYQISDMNNTLISEDTKTFTLGSA 157
>sp|Q9JIR0|RIMB1_RAT Peripheral-type benzodiazepine receptor-associated protein 1
OS=Rattus norvegicus GN=Bzrap1 PE=1 SV=2
Length = 1847
Score = 30.8 bits (68), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 21/44 (47%)
Query: 131 PPVKLHCSMLAEDAIKAAVKDYEAKRTKPSAASEAELPPRAADV 174
PP +H + L A DY + P+ EAELP RA DV
Sbjct: 1746 PPKLIHSAALKTSRPMVAAFDYNPRENSPNMDVEAELPFRAGDV 1789
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.128 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,022,984
Number of Sequences: 539616
Number of extensions: 2327915
Number of successful extensions: 6446
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 6371
Number of HSP's gapped (non-prelim): 48
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)