Query 030645
Match_columns 174
No_of_seqs 81 out of 83
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 03:14:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kpa_A Probable ubiquitin fold 100.0 7.1E-94 2.4E-98 582.0 12.5 161 3-164 8-168 (168)
2 2z6o_A UFM1-conjugating enzyme 100.0 5.8E-79 2E-83 496.8 11.6 167 3-170 6-172 (172)
3 2h2y_A Ubiquitin-conjugating e 99.7 3.3E-17 1.1E-21 125.1 10.2 93 29-129 20-118 (136)
4 2fo3_A Ubiquitin-conjugating e 99.7 3E-17 1E-21 123.4 9.7 90 31-128 8-103 (125)
5 2a7l_A Hypothetical ubiquitin- 99.7 2.2E-17 7.5E-22 127.0 8.4 91 31-129 24-123 (136)
6 4gpr_A Ubiquitin-conjugating e 99.7 7E-17 2.4E-21 124.5 10.6 91 31-129 6-101 (151)
7 2ayv_A Ubiquitin-conjugating e 99.7 8.9E-17 3E-21 126.7 10.8 93 29-129 21-118 (166)
8 2c2v_B Ubiquitin-conjugating e 99.7 6.4E-17 2.2E-21 125.2 9.6 104 30-149 6-114 (154)
9 1zdn_A Ubiquitin-conjugating e 99.7 1.3E-16 4.6E-21 123.9 11.2 99 28-141 12-115 (158)
10 1z2u_A Ubiquitin-conjugating e 99.7 6.6E-17 2.2E-21 124.2 9.2 91 31-129 6-101 (150)
11 2r0j_A Ubiquitin carrier prote 99.7 7.3E-17 2.5E-21 124.1 9.0 90 32-129 4-98 (149)
12 2c4o_A Ubiquitin-conjugating e 99.7 1.2E-16 4.2E-21 125.6 10.3 93 29-129 19-116 (165)
13 3h8k_A Ubiquitin-conjugating e 99.7 1.8E-16 6E-21 123.1 10.4 84 30-121 4-90 (164)
14 1jat_A Ubiquitin-conjugating e 99.7 8.9E-17 3.1E-21 124.3 8.6 104 30-149 6-114 (155)
15 2e2c_A Ubiquitin conjugating e 99.7 2E-16 6.9E-21 122.4 10.5 98 29-141 9-111 (156)
16 1fxt_A Ubiquitin-conjugating e 99.7 1.6E-16 5.4E-21 122.0 9.7 92 31-129 3-100 (149)
17 2ucz_A UBC7, ubiquitin conjuga 99.7 3.9E-16 1.3E-20 121.6 11.0 84 30-121 5-91 (165)
18 3k9o_A Ubiquitin-conjugating e 99.7 1.1E-16 3.6E-21 128.6 7.8 109 31-151 7-120 (201)
19 1yrv_A Ubiquitin-conjugating l 99.7 1.9E-16 6.6E-21 125.3 9.0 94 29-129 23-123 (169)
20 1yh2_A HSPC150 protein similar 99.7 3.9E-16 1.3E-20 122.7 10.4 101 30-146 5-114 (169)
21 3bzh_A Ubiquitin-conjugating e 99.7 4.9E-16 1.7E-20 125.7 10.8 106 29-150 48-158 (194)
22 2aak_A UBC1, ubiquitin conjuga 99.7 2.7E-16 9.3E-21 121.0 8.6 92 30-129 5-101 (152)
23 1ayz_A UBC2, ubiquitin-conjuga 99.7 2.7E-16 9.3E-21 124.2 8.6 91 31-129 6-101 (169)
24 3rcz_B SUMO-conjugating enzyme 99.7 2.7E-16 9.3E-21 123.6 8.5 93 29-129 10-114 (163)
25 2bep_A Ubiquitin-conjugating e 99.6 7.2E-16 2.4E-20 119.7 10.1 96 30-129 9-109 (159)
26 2f4z_A Tgtwinscan_2721 - E2 do 99.6 4.5E-16 1.5E-20 126.0 8.8 108 22-129 25-143 (193)
27 4ds2_A Ubiquitin-conjugating e 99.6 6.6E-16 2.2E-20 121.0 9.3 98 31-129 10-119 (167)
28 2y9m_A Ubiquitin-conjugating e 99.6 1.2E-15 4.2E-20 120.3 10.5 100 30-129 7-118 (172)
29 2pwq_A Ubiquitin conjugating e 99.6 8.5E-16 2.9E-20 126.4 9.8 95 28-129 22-121 (216)
30 3e46_A Ubiquitin-conjugating e 99.6 5.2E-16 1.8E-20 130.6 8.7 127 12-150 34-171 (253)
31 2awf_A Ubiquitin-conjugating e 99.6 1.3E-15 4.4E-20 120.5 10.3 86 28-121 16-104 (172)
32 3rz3_A Ubiquitin-conjugating e 99.6 2.9E-15 1E-19 119.2 10.8 84 30-121 8-94 (183)
33 1i7k_A Ubiquitin-conjugating e 99.6 1.3E-15 4.3E-20 122.0 8.3 100 27-141 28-132 (179)
34 2gjd_A Ubiquitin-conjugating e 99.6 2.3E-15 7.9E-20 116.8 8.8 91 31-129 6-108 (157)
35 2a4d_A Ubiquitin-conjugating e 99.6 3.9E-15 1.3E-19 117.7 9.6 93 30-129 26-129 (160)
36 1tte_A Ubiquitin-conjugating e 99.6 3.7E-15 1.3E-19 122.6 9.4 92 31-129 4-101 (215)
37 2f4w_A Ubiquitin-conjugating e 99.6 2.4E-15 8.2E-20 120.7 7.9 114 28-155 13-130 (187)
38 1jat_B Ubiquitin-conjugating e 99.6 3.6E-15 1.2E-19 113.6 8.1 93 31-129 8-109 (138)
39 1wzv_A Ubiquitin-conjugating e 99.6 9.1E-15 3.1E-19 112.8 10.4 96 31-141 6-107 (155)
40 3fn1_B NEDD8-conjugating enzym 99.6 6.7E-15 2.3E-19 114.8 8.6 91 30-129 15-117 (167)
41 2onu_A Ubiquitin-conjugating e 99.6 1.8E-15 6E-20 117.4 5.2 88 32-129 5-97 (152)
42 1zuo_A Hypothetical protein LO 99.6 1.6E-15 5.4E-20 121.8 4.9 97 29-129 27-141 (186)
43 1y8x_A Ubiquitin-conjugating e 99.6 1.1E-14 3.7E-19 113.8 9.2 90 29-129 6-101 (160)
44 2grr_A Ubiquitin-conjugating e 99.6 7.4E-15 2.5E-19 114.4 7.9 92 30-129 8-111 (161)
45 2hlw_A Ubiquitin-conjugating e 99.5 1E-14 3.6E-19 115.8 8.0 93 30-129 36-139 (170)
46 3o2u_A NEDD8-conjugating enzym 99.5 1.4E-14 4.7E-19 116.5 7.7 93 29-131 29-132 (190)
47 2nvu_C NEDD8-conjugating enzym 99.5 2.3E-14 7.8E-19 114.4 8.7 92 28-130 25-122 (180)
48 2z5d_A Ubiquitin-conjugating e 99.5 1.4E-14 4.6E-19 116.4 7.0 92 29-131 25-121 (179)
49 1yf9_A Ubiquitin carrier prote 99.5 2.3E-14 7.7E-19 113.6 7.3 89 30-129 13-106 (171)
50 2q0v_A Ubiquitin-conjugating e 99.5 4.8E-14 1.6E-18 110.5 9.0 93 30-129 22-124 (156)
51 4ddg_A Ubiquitin-conjugating e 99.5 5.4E-14 1.8E-18 123.2 8.8 92 31-130 5-101 (399)
52 1c4z_D UBCH7, ubiquitin conjug 99.5 3.7E-14 1.3E-18 109.3 6.3 90 32-129 5-100 (154)
53 3ceg_A Baculoviral IAP repeat- 99.5 3.7E-13 1.3E-17 117.4 11.8 103 22-128 69-188 (323)
54 3r3q_A Suppressor protein STP2 97.9 1.2E-05 4E-10 64.2 5.4 63 63-126 57-138 (162)
55 3obq_A Tumor susceptibility ge 97.1 0.00054 1.8E-08 53.8 4.7 63 63-126 51-120 (146)
56 1ukx_A GCN2, GCN2 EIF2alpha ki 94.7 0.11 3.8E-06 37.9 7.1 22 81-102 63-84 (137)
57 2ebm_A RWD domain-containing p 94.0 0.035 1.2E-06 40.2 3.0 22 81-102 55-76 (128)
58 2yz0_A Serine/threonine-protei 93.2 0.06 2E-06 39.6 3.1 24 80-103 61-84 (138)
59 2ebk_A RWD domain-containing p 92.9 0.057 2E-06 39.3 2.7 23 81-103 56-78 (128)
60 2day_A Ring finger protein 25; 92.9 0.066 2.3E-06 38.8 2.9 23 81-103 59-81 (128)
61 2dax_A Protein C21ORF6; RWD do 92.6 0.063 2.2E-06 40.5 2.6 24 81-104 73-96 (152)
62 2daw_A RWD domain containing p 91.0 0.14 4.8E-06 39.1 2.9 22 82-103 76-97 (154)
63 3zqs_A E3 ubiquitin-protein li 72.2 4.3 0.00015 33.0 4.4 45 54-101 14-58 (186)
64 3t98_B Nucleoporin NUP58/NUP45 36.3 22 0.00077 25.8 2.6 17 30-46 73-89 (93)
65 2blf_B SORB, sulfite\:cytochro 21.2 1.2E+02 0.004 20.1 3.9 26 23-48 43-80 (81)
66 2j5d_A BNIP3 TM, BCL2/adenovir 20.3 27 0.00093 23.0 0.5 17 133-149 22-38 (45)
No 1
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=100.00 E-value=7.1e-94 Score=581.98 Aligned_cols=161 Identities=58% Similarity=1.176 Sum_probs=156.0
Q ss_pred CCCchhhhhhccccceeccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeeccccee
Q 030645 3 GWDPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYE 82 (174)
Q Consensus 3 ~~d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~~~~~~kye 82 (174)
-|+++.+++|++||||+|||||||+++|++||||||++||+||++||++|||||+++| |++||+|+|+|||+|++.+|+
T Consensus 8 ~~~~~~~~~~~~ipll~t~agPrd~~~w~~RlkeEy~alI~yv~~nK~~d~dWf~~~s-n~~GT~W~G~cw~~~~~~kye 86 (168)
T 3kpa_A 8 HMEPSVKESVSRIPLLKTKAGPRDGDKWTARLKEEYASLITYVEHNKASDSHWFHLES-NPQGTRWYGTCWTYYKNEKYE 86 (168)
T ss_dssp ----CHHHHHTTSCCCCCCCCTTSTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-CTTSCEEEEEEEEEETTEEEE
T ss_pred ccChHHHHHHhhCceeeccCCCCCHHHHHHHHHHHHHHHHHHHHhcccccCCeeeecC-CCCCCcccCccceeeccceeE
Confidence 4789999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCeeecCCCCCcccccccCceeeccCCCcccccccCCchhHHHHHhhcccchhhhhhhhhHhhCcc
Q 030645 83 FDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMI 162 (174)
Q Consensus 83 F~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i 162 (174)
|+|+|+||++||++||+|+||++||+|+||||||+||||+||+|+|+|||||||||||||||||||||+|||+||++|+|
T Consensus 87 FkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~GkICLdIhwkPlW~~n~P~fGiahalalgl~pwla~eiP~lv~~g~i 166 (168)
T 3kpa_A 87 FEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGGKICMTTHFFPLWARNVPYFGISHVLALGLGPWLSIEVPAMVEEGYL 166 (168)
T ss_dssp EEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTTEECCCTTHHHHHHHTTTTCCHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred EEEEEeCCccCCCCCCEeecccccCcCccccCCCcEEeccccchhhHhcCCchhHHHHHHhccchHHhhhhHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cc
Q 030645 163 KH 164 (174)
Q Consensus 163 ~~ 164 (174)
++
T Consensus 167 ~~ 168 (168)
T 3kpa_A 167 KP 168 (168)
T ss_dssp CC
T ss_pred CC
Confidence 85
No 2
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=100.00 E-value=5.8e-79 Score=496.84 Aligned_cols=167 Identities=62% Similarity=1.230 Sum_probs=163.8
Q ss_pred CCCchhhhhhccccceeccCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeeeeeccccee
Q 030645 3 GWDPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVHNLLKYE 82 (174)
Q Consensus 3 ~~d~~~~~~~~~ipl~~~~agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~~~~~~kye 82 (174)
|||++|+++|++||||+|+|||||+++|++||+|||++||+|++.||+++++||.+.+ |++||+|+|+||++|+|.+|+
T Consensus 6 ~~~~~~~~~~~~ip~m~t~a~p~~~~~w~~RL~eE~k~L~k~v~p~k~n~~~W~~ii~-Gp~gT~WeGgcw~~~~~~~y~ 84 (172)
T 2z6o_A 6 MADEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYE 84 (172)
T ss_dssp CHHHHHHHHHTTSCCCCCCCCTTCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-CTTSCEEEEEEEEEETTEEEE
T ss_pred hhhHHHHHHHHhCcccccccCCCccHHHHHHHHHHHHHHHHHhccCccccceeEEeec-CCCCCcccCcccccccccceE
Confidence 8999999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred EEEEEecCCCCCCCCCeeecCCCCCcccccccCceeeccCCCcccccccCCchhHHHHHhhcccchhhhhhhhhHhhCcc
Q 030645 83 FDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGMI 162 (174)
Q Consensus 83 F~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICLddHf~PlW~~n~p~fgiaha~algl~pwla~eip~lv~~g~i 162 (174)
|+|+|+||++||.+||+|+||++++++.+|||+|+||||+||+|+|++|+|+|||+|+||||||||||||||+||++|+|
T Consensus 85 F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~IahiL~lgl~pwla~eip~lv~~~~~ 164 (172)
T 2z6o_A 85 FDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGLAHLMALGLGPWLAVEIPDLIQKGVI 164 (172)
T ss_dssp EEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHHHHHHHTHHHHHHHHHHHHHHHTCS
T ss_pred EEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCCcEechhhccccccccCCccCHHHHHhhccCchhhhhhHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCC
Q 030645 163 KHRDDVSG 170 (174)
Q Consensus 163 ~~~~~~~~ 170 (174)
+|+++.++
T Consensus 165 ~~~~~~~~ 172 (172)
T 2z6o_A 165 QHKEKCNQ 172 (172)
T ss_dssp CCSEECC-
T ss_pred cchhhccC
Confidence 99998753
No 3
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.72 E-value=3.3e-17 Score=125.12 Aligned_cols=93 Identities=18% Similarity=0.279 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+ +....|++.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 20 ~~~~RL~kEl~~l~~-------~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 92 (136)
T 2h2y_A 20 NANYRIQKELNNFLK-------NPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKP 92 (136)
T ss_dssp SHHHHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCC
Confidence 368999999999886 234567777866899999999998 89999999999999999999999999998765
Q ss_pred -CcccccccCceeecc---CCCccccc
Q 030645 107 -GKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 107 -gkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 93 ~~HPnv-~~~G~ICl~iL~~~WsP~~t 118 (136)
T 2h2y_A 93 PKHTHV-YSNGDICLSVLGDDYNPSLS 118 (136)
T ss_dssp CCCTTB-CTTCCBCCGGGTTTCCTTCC
T ss_pred CCCCcC-CCCCEEECccccCCCCCCCc
Confidence 89998 679999998 67888753
No 4
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.71 E-value=3e-17 Score=123.35 Aligned_cols=90 Identities=20% Similarity=0.297 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC-C
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD-G 107 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld-g 107 (174)
..||.+||+.|.+ +....|++.+.++|...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-. .
T Consensus 8 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~ 80 (125)
T 2fo3_A 8 NYRIQKELHNFLN-------NPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPK 80 (125)
T ss_dssp -CHHHHHHHHHHH-------SCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCC
Confidence 4699999999876 233567777766899999999998 89999999999999999999999999998765 8
Q ss_pred cccccccCceeecc---CCCcccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLW 128 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW 128 (174)
|+|+ |.+|+|||+ +.|+|.|
T Consensus 81 HPnv-~~~G~iCl~iL~~~W~P~~ 103 (125)
T 2fo3_A 81 HTHV-YSNGDICLSLLGDDYNPSL 103 (125)
T ss_dssp BTTB-CTTSBBCCGGGTTTCCTTC
T ss_pred CCcC-CCCCEEEchhcCCCCCCCC
Confidence 9998 589999998 7788775
No 5
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.71 E-value=2.2e-17 Score=126.99 Aligned_cols=91 Identities=21% Similarity=0.338 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEE--eeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRI--SAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~L--ep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
..||.+||+.|.+ +....|++ .+.++|...|.+.+-+ +++|++-.|.++|.+|.+||..||+|+|-.-.
T Consensus 24 ~~RL~kEl~~l~~-------~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i 96 (136)
T 2a7l_A 24 QKRLQKELLALQN-------DPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGEN 96 (136)
T ss_dssp CHHHHHHHHHHHH-------SCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 4899999999887 22344553 3656899999999998 89999999999999999999999999998777
Q ss_pred C--cccccccCceeecc---CCCccccc
Q 030645 107 G--KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 107 g--kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
. |+|+ |.+|+|||+ +.|+|.|+
T Consensus 97 ~~~HPNV-~~~G~ICL~iL~~~WsP~~t 123 (136)
T 2a7l_A 97 IPVHPHV-YSNGHICLSILTEDWSPALS 123 (136)
T ss_dssp CCCBTTB-CTTCBBCCGGGTTTCCTTSC
T ss_pred cCCCccC-CCCCeEEchhcCCCCCCCCc
Confidence 7 9998 579999998 78999874
No 6
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.70 E-value=7e-17 Score=124.46 Aligned_cols=91 Identities=19% Similarity=0.262 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
.+||.+||+.|.+ +..+.|++.|.++|.+.|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 78 (151)
T 4gpr_A 6 MRRIQKELREIQQ-------DPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYH 78 (151)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCccc
Confidence 5899999999886 335678888978999999999998 8999999999999999999999999999888899
Q ss_pred ccccccCceeecc---CCCccccc
Q 030645 109 TQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 109 t~kmYrgGkICLd---dHf~PlW~ 129 (174)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 Pnv~-~~G~iCl~iL~~~W~p~~~ 101 (151)
T 4gpr_A 79 PNIN-KNGVICLDILKDQWSPALT 101 (151)
T ss_dssp TTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred ceEC-CCCEEEcccccCCCCCCCc
Confidence 9995 79999998 78888764
No 7
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.70 E-value=8.9e-17 Score=126.69 Aligned_cols=93 Identities=16% Similarity=0.237 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 21 ~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 93 (166)
T 2ayv_A 21 GALKRINKELNDLSK-------DPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKI 93 (166)
T ss_dssp THHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCC
Confidence 367999999999977 345678888877899999999998 89999999999999999999999999998888
Q ss_pred CcccccccCceeecc---CCCccccc
Q 030645 107 GKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 107 gkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
.|+|+ |.+|+|||+ +.|+|.|+
T Consensus 94 ~HPNI-~~~G~ICL~iL~~~WsP~~t 118 (166)
T 2ayv_A 94 YHPNI-NSQGAICLDILKDQWSPALT 118 (166)
T ss_dssp CBTTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred cCCcC-CCCCeEEcccccccCCCCCc
Confidence 99998 579999998 67887763
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.69 E-value=6.4e-17 Score=125.24 Aligned_cols=104 Identities=19% Similarity=0.263 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
...||.+||+.|.+ +....|++.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.--.
T Consensus 6 ~~~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (154)
T 2c2v_B 6 LPRRIIKETQRLLA-------EPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIY 78 (154)
T ss_dssp CCHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcc
Confidence 45899999999887 234668888877899999999998 899999999999999999999999999988788
Q ss_pred cccccccCceeecc---CCCcccccccCCchhHHHHHhhcccchh
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHALCLGLAPWL 149 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwl 149 (174)
|+|+ |.+|+|||+ +.|+|.| +|.+.| ++|--.|
T Consensus 79 HPnv-~~~G~iCl~iL~~~W~p~~-------~i~~vl-~~i~~ll 114 (154)
T 2c2v_B 79 HPNV-DKLGRICLDILKDKWSPAL-------QIRTVL-LSIQALL 114 (154)
T ss_dssp CTTB-CTTCBBCCHHHHTSCCTTC-------CHHHHH-HHHHHHT
T ss_pred cCcC-ccCCeEEchhccCCCCCCC-------cHHHHH-HHHHHHH
Confidence 9999 688999997 7888765 566665 4544443
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.69 E-value=1.3e-16 Score=123.91 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 030645 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (174)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPel 105 (174)
.....||.+||+.|.+ +..+.|++.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 12 ~~~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 84 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTA-------DPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTK 84 (158)
T ss_dssp HHHHHHHHHHHHHHHH-------SCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccC
Confidence 4689999999999876 235668888867899999999998 8999999999999999999999999999887
Q ss_pred CCcccccccCceeecc---CCCcccccccCCchhHHHHH
Q 030645 106 DGKTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHAL 141 (174)
Q Consensus 106 dgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 141 (174)
..|+|+ |.+|+|||+ +.|+|.| +|.+.|
T Consensus 85 i~HPnv-~~~G~iCl~iL~~~W~p~~-------~i~~vL 115 (158)
T 1zdn_A 85 IFHPNV-GANGEICVNVLKRDWTAEL-------GIRHVL 115 (158)
T ss_dssp CCCTTB-CTTSBBCHHHHTTTCCTTC-------CHHHHH
T ss_pred cccCCC-CCCCEEehhhcCCCCCCCC-------cHHHHH
Confidence 899998 467999997 6788765 466654
No 10
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.69 E-value=6.6e-17 Score=124.23 Aligned_cols=91 Identities=16% Similarity=0.263 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
.+||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.---|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (150)
T 1z2u_A 6 LKRIQKELQDLGR-------DPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 78 (150)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCccc
Confidence 5799999999987 345678888877899999999998 8999999999999999999999999999877789
Q ss_pred ccccccCceeecc---CCCccccc
Q 030645 109 TQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 109 t~kmYrgGkICLd---dHf~PlW~ 129 (174)
+|+ |.+|+|||+ +.|+|.|+
T Consensus 79 Pnv-~~~G~iCl~iL~~~W~p~~~ 101 (150)
T 1z2u_A 79 PNI-NSNGSICLDILRSQWSPALT 101 (150)
T ss_dssp TTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred CcC-CCCCeEeeccccCCCCCCCC
Confidence 998 479999998 67887764
No 11
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.69 E-value=7.3e-17 Score=124.10 Aligned_cols=90 Identities=14% Similarity=0.165 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 030645 32 QRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (174)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (174)
+||.+||+.|.+ +....|++.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-..|+
T Consensus 4 ~RL~kEl~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 76 (149)
T 2r0j_A 4 RRITKETQNLAN-------EPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHP 76 (149)
T ss_dssp HHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBT
T ss_pred HHHHHHHHHHHh-------CCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccC
Confidence 799999999876 235678888867899999999988 89999999999999999999999999998888999
Q ss_pred cccccCceeecc---CCCccccc
Q 030645 110 QKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 110 ~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+. .+|+|||+ +.|+|.|+
T Consensus 77 nv~-~~G~iCl~iL~~~W~p~~~ 98 (149)
T 2r0j_A 77 NID-KLGRICLDILKDKWSPALQ 98 (149)
T ss_dssp TBC-TTCBBCCGGGTTTCCTTSC
T ss_pred CCC-CCCEEechhcCCCCCCCCc
Confidence 985 67999997 67887763
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.69 E-value=1.2e-16 Score=125.57 Aligned_cols=93 Identities=16% Similarity=0.249 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-..-
T Consensus 19 ~~~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i 91 (165)
T 2c4o_A 19 MALKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRI 91 (165)
T ss_dssp HHHHHHHHHHHHHHS-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCC
Confidence 478999999999875 345678888877899999999998 89999999999999999999999999998777
Q ss_pred CcccccccCceeecc---CCCccccc
Q 030645 107 GKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 107 gkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
-|+|+ |.+|+|||+ +.|+|.|+
T Consensus 92 ~HPnV-~~~G~ICl~iL~~~W~P~~t 116 (165)
T 2c4o_A 92 YHPNI-NSNGSICLDILRSQWSPALT 116 (165)
T ss_dssp CBTTB-CTTCBBCCGGGTTTCCTTCC
T ss_pred cCCcC-CCCCeEeehhhcCCCCCcCc
Confidence 89998 479999998 67887753
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.68 E-value=1.8e-16 Score=123.15 Aligned_cols=84 Identities=20% Similarity=0.301 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
-.+||.+||+.|.+ +..+.|++.|++. |...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 4 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 76 (164)
T 3h8k_A 4 ALKRLMAEYKQLTL-------NPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEM 76 (164)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCC
Confidence 46899999999886 3456788888775 99999999998 89999999999999999999999999998878
Q ss_pred CcccccccCceeecc
Q 030645 107 GKTQKMYRGGKICLT 121 (174)
Q Consensus 107 gkt~kmYrgGkICLd 121 (174)
-|+|+ |.+|+|||+
T Consensus 77 ~HPNV-~~~G~iCl~ 90 (164)
T 3h8k_A 77 FHPNI-YPDGRVCIS 90 (164)
T ss_dssp CCTTB-CTTSBBCCG
T ss_pred ccCCC-CCCCcEeee
Confidence 99998 789999996
No 14
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.68 E-value=8.9e-17 Score=124.31 Aligned_cols=104 Identities=19% Similarity=0.260 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
...||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.---
T Consensus 6 ~~~RL~kE~~~l~~-------~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (155)
T 1jat_A 6 LPKRIIKETEKLVS-------DPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIY 78 (155)
T ss_dssp CCHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccc
Confidence 45899999999987 345678888867899999999988 899999999999999999999999999987778
Q ss_pred cccccccCceeecc---CCCcccccccCCchhHHHHHhhcccchh
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHALCLGLAPWL 149 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwl 149 (174)
|+|+. .+|+|||+ +.|+|.| +|.+.| ++|--.|
T Consensus 79 HPnv~-~~G~iCl~iL~~~W~p~~-------~i~~vl-~~i~~ll 114 (155)
T 1jat_A 79 HPNID-RLGRICLDVLKTNWSPAL-------QIRTVL-LSIQALL 114 (155)
T ss_dssp BTTBC-TTCCBCCGGGTTTCCTTC-------CHHHHH-HHHHHHH
T ss_pred cCCCC-CCCEEEchhhccCCCCCC-------CHHHHH-HHHHHHH
Confidence 99986 99999998 6788765 566665 4443333
No 15
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.68 E-value=2e-16 Score=122.44 Aligned_cols=98 Identities=15% Similarity=0.295 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+. ....|++.|.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 9 ~~~~RL~kEl~~l~~~-------~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 81 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMS-------GDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPC 81 (156)
T ss_dssp CHHHHHHHHHHHHHHH-------CCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhC-------CCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCc
Confidence 3679999999999872 23568888867899999999998 89999999999999999999999999998878
Q ss_pred CcccccccCceeecc---CCCcccccccCCchhHHHHH
Q 030645 107 GKTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHAL 141 (174)
Q Consensus 107 gkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 141 (174)
.|+|+. .+|+|||+ +.|+|.| +|.+.|
T Consensus 82 ~HPnv~-~~G~iCl~iL~~~W~p~~-------~i~~vL 111 (156)
T 2e2c_A 82 WHPNVD-QSGNICLDILKENWTASY-------DVRTIL 111 (156)
T ss_dssp CBTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH
T ss_pred ccCCCc-cCceEECccccccCCCCC-------cHHHHH
Confidence 999985 58999998 5677654 566665
No 16
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.68 E-value=1.6e-16 Score=122.00 Aligned_cols=92 Identities=15% Similarity=0.255 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
..||.+||+.|.+- ....|++.+.++ +...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..
T Consensus 3 ~~RL~~El~~l~~~-------~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 75 (149)
T 1fxt_A 3 AKRIMKEIQAVKDD-------PAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 75 (149)
T ss_dssp HHHHHHHHHHHHHC-------GGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHhC-------CCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCc
Confidence 37999999998872 235678888676 89999999998 899999999999999999999999999987779
Q ss_pred cccccccCceeecc---CCCccccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+|+...+|+|||+ +.|+|.|+
T Consensus 76 HPni~~~~G~iCl~iL~~~W~p~~~ 100 (149)
T 1fxt_A 76 HPNISSVTGAICLDILKNAWSPVIT 100 (149)
T ss_dssp BTTBCSSSCCBCCHHHHTSCCTTCC
T ss_pred cCCCcCCCCeEeCCcCCCCCCCCCc
Confidence 99997779999998 78988763
No 17
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.67 E-value=3.9e-16 Score=121.57 Aligned_cols=84 Identities=18% Similarity=0.287 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
=..||.+||+.|.+ +....|++.+++ .+...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-.
T Consensus 5 a~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i 77 (165)
T 2ucz_A 5 AQKRLLKELQQLIK-------DSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSI 77 (165)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCC
Confidence 36899999999876 345678888876 699999999988 89999999999999999999999999998878
Q ss_pred CcccccccCceeecc
Q 030645 107 GKTQKMYRGGKICLT 121 (174)
Q Consensus 107 gkt~kmYrgGkICLd 121 (174)
.|+|+ |.+|+|||+
T Consensus 78 ~HPNv-~~~G~iCl~ 91 (165)
T 2ucz_A 78 LHPNI-YPNGEVCIS 91 (165)
T ss_dssp SCTTB-CTTSBBCCG
T ss_pred ccCCC-CCCCcEeeh
Confidence 99997 679999997
No 18
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.67 E-value=1.1e-16 Score=128.64 Aligned_cols=109 Identities=22% Similarity=0.325 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
.+||.+||+.|.+- .......|+++|.+++.+.|.+.+-| .++|++..|.++|.+|.+||..||.|+|..-.-|
T Consensus 7 ~~Rl~kEl~~l~~~----~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 82 (201)
T 3k9o_A 7 VQRIKREFKEVLKS----EETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWH 82 (201)
T ss_dssp HHHHHHHHHHHHTC----HHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHhC----CCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCccc
Confidence 58999999998761 11114678899988999999999998 8999999999999999999999999999888899
Q ss_pred ccccccCceeecc---CCCcccccccCCchhHHHHHhhcccchhhh
Q 030645 109 TQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHALCLGLAPWLAA 151 (174)
Q Consensus 109 t~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla~ 151 (174)
+|+...+|+|||+ +.|+|. ++|.+.| ++|--.|+.
T Consensus 83 Pnv~~~~G~iCl~iL~~~W~p~-------~~i~~vL-~~i~~ll~~ 120 (201)
T 3k9o_A 83 PNISSVTGAICLDILKDQWAAA-------MTLRTVL-LSLQALLAA 120 (201)
T ss_dssp TTBCTTTCBBCCGGGTTTCCTT-------CCHHHHH-HHHHHHHHS
T ss_pred CCCcCCCCeeeCcccccCCCCC-------CCHHHHH-HHHHHHhcC
Confidence 9998899999998 667665 5677766 565555543
No 19
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.66 E-value=1.9e-16 Score=125.29 Aligned_cols=94 Identities=10% Similarity=0.115 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+- ....|.+.|++++...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 23 ~a~~RL~kEl~~l~~~-------~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 95 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKEN-------NYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIP 95 (169)
T ss_dssp HHHHHHHHHHHHHHHH-------CCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHhC-------CCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCC
Confidence 3689999999998762 23557888878899999999998 89999999999999999999999999998777
Q ss_pred CcccccccCceeecc-----CCCccccc
Q 030645 107 GKTQKMYRGGKICLT-----VHFKPLWA 129 (174)
Q Consensus 107 gkt~kmYrgGkICLd-----dHf~PlW~ 129 (174)
-|+|+.|.+|+|||+ +.|+|.|+
T Consensus 96 ~HPNI~~~~G~ICL~iL~~~~~WsP~~t 123 (169)
T 1yrv_A 96 FHPNVDPHTGQPCIDFLDNPEKWNTNYT 123 (169)
T ss_dssp CCTTBCTTTCCBCCHHHHCGGGCCTTCC
T ss_pred ccCcccCCCCeEeehhhcCCcCCCCcCC
Confidence 999999999999997 67888874
No 20
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.66 E-value=3.9e-16 Score=122.69 Aligned_cols=101 Identities=21% Similarity=0.242 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
-..||.+||+.|.+ +....|++.+.+++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-..
T Consensus 5 ~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (169)
T 1yh2_A 5 RASRLKRELHMLAT-------EPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIY 77 (169)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCc
Confidence 46899999999876 234668788867899999999998 899999999999999999999999999988889
Q ss_pred cccccccCceeecc-------CCCcccccccCCchhHHHHHhhccc
Q 030645 108 KTQKMYRGGKICLT-------VHFKPLWAKNCPRFGIAHALCLGLA 146 (174)
Q Consensus 108 kt~kmYrgGkICLd-------dHf~PlW~~n~p~fgiaha~algl~ 146 (174)
|+|+. .+|+|||+ +.|+|.| +|.+.| ++|-
T Consensus 78 HPNv~-~~G~iCl~iL~~~~~~~W~p~~-------~i~~vL-~si~ 114 (169)
T 1yh2_A 78 HPNID-SAGRICLDVLKLPPKGAWRPSL-------NIATVL-TSIQ 114 (169)
T ss_dssp BTTBC-TTCBBCCGGGSCTTTSCCCTTS-------CHHHHH-HHHH
T ss_pred cccCC-cCCeEecccccCCcccCCCCCC-------cHHHHH-HHHH
Confidence 99986 89999997 4566655 566665 3443
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.66 E-value=4.9e-16 Score=125.69 Aligned_cols=106 Identities=16% Similarity=0.212 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+ +....|.+.|.+++...|.+.+-| +++|++-.|.|+|.+|.+||..||.|+|-.-.
T Consensus 48 ~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i 120 (194)
T 3bzh_A 48 TSAKRIQKELADITL-------DPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRI 120 (194)
T ss_dssp HHHHHHHHHHHHHHH-------SCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHHh-------CCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCC
Confidence 478999999999876 234668888877999999999998 88999999999999999999999999998888
Q ss_pred CcccccccCceeecc---CCCcccccccCCchhHHHHHhhcccchhh
Q 030645 107 GKTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHALCLGLAPWLA 150 (174)
Q Consensus 107 gkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla 150 (174)
.|+|+. .+|+|||+ +.|+|.| +|.++| ++|--.|.
T Consensus 121 ~HPNV~-~~G~ICL~iL~~~WsP~~-------ti~~vL-~sI~~ll~ 158 (194)
T 3bzh_A 121 YHCNIN-SQGVICLDILKDNWSPAL-------TISKVL-LSICSLLT 158 (194)
T ss_dssp CBTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH-HHHHHHHH
T ss_pred ccceEC-CCCceechhhhccCCCcC-------cHHHHH-HHHHHHHh
Confidence 999985 78999998 5677765 577665 45444443
No 22
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.65 E-value=2.7e-16 Score=121.01 Aligned_cols=92 Identities=16% Similarity=0.275 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
-..||.+||+.|.+ +..+.|.+.|.+++...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.--.
T Consensus 5 a~~RL~~E~~~l~~-------~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 77 (152)
T 2aak_A 5 ARKRLMRDFKRLQQ-------DPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMF 77 (152)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcc
Confidence 35899999999987 234578888867899999999998 899999999999999999999999999987778
Q ss_pred cccccccCceeecc---CCCccccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+|+. .+|+|||+ +.|+|.|+
T Consensus 78 HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (152)
T 2aak_A 78 HPNIY-ADGSICLDILQNQWSPIYD 101 (152)
T ss_dssp CTTBC-TTSBBCCGGGTTSCCTTCC
T ss_pred cCCCC-CCCEEechhhcCCCCCCCc
Confidence 99985 59999998 67887663
No 23
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.65 E-value=2.7e-16 Score=124.22 Aligned_cols=91 Identities=16% Similarity=0.269 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
..||.+||+.|.+ +....|.+.|.+.+...|.+.+-| .++|++-.|.|+|.+|.+||..||.|+|-.--.|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 6 RRRLMRDFKRMKE-------DAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 5899999999876 234567778867889999999998 8999999999999999999999999999887899
Q ss_pred ccccccCceeecc---CCCccccc
Q 030645 109 TQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 109 t~kmYrgGkICLd---dHf~PlW~ 129 (174)
+|+. .+|+|||+ +.|+|.|+
T Consensus 79 PNI~-~~G~ICl~iL~~~WsP~~~ 101 (169)
T 1ayz_A 79 PNVY-ANGEICLDILQNRWTPTYD 101 (169)
T ss_dssp TTBC-TTSBBCCGGGTTTCCTTCC
T ss_pred CCCC-CCCeEeehhhccCCCCcCc
Confidence 9985 69999998 57887763
No 24
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.65 E-value=2.7e-16 Score=123.60 Aligned_cols=93 Identities=19% Similarity=0.260 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-----CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeee
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-----EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELE 101 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-----dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~ 101 (174)
+=.+||.+||+.|.+ +....|...|++. +.+.|.+.+-| +++|++-.|.|+|.+|.+||..||.|+
T Consensus 10 ~~~~RL~kEl~~l~~-------~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~ 82 (163)
T 3rcz_B 10 LCKTRLQEERKQWRR-------DHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCR 82 (163)
T ss_dssp HHHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHHHh-------CCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEE
Confidence 347899999999987 3456677777554 78999999998 899999999999999999999999999
Q ss_pred cCCCCCcccccccCceeecc-----CCCccccc
Q 030645 102 LPQLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (174)
Q Consensus 102 fPeldgkt~kmYrgGkICLd-----dHf~PlW~ 129 (174)
|-.---|+|+ |.+|+|||+ +.|+|.|+
T Consensus 83 F~t~i~HPnV-~~~G~iCl~iL~~~~~W~p~~t 114 (163)
T 3rcz_B 83 FTPPLFHPNV-YPSGTVCLSILNEEEGWKPAIT 114 (163)
T ss_dssp ESSCCCSTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred EeCCCccCCC-CCCCcEeccccCCCCCcCCcCc
Confidence 9887799999 699999998 24888874
No 25
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.65 E-value=7.2e-16 Score=119.67 Aligned_cols=96 Identities=19% Similarity=0.276 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
-..||.+||+.|.+--. .....|.+.+.+++.+.|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-..
T Consensus 9 a~~RL~kEl~~l~~~~~----~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 84 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEE----TSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIW 84 (159)
T ss_dssp HHHHHHHHHHHHHHCHH----HHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHhcCC----CCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCC
Confidence 46899999999986211 123568888877899999999988 899999999999999999999999999987778
Q ss_pred cccccccCceeecc---CCCccccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+|+...+|+|||+ +.|+|.|+
T Consensus 85 HPni~~~~G~iCl~iL~~~W~p~~~ 109 (159)
T 2bep_A 85 HPNISSVTGAICLDILKDQWAAAMT 109 (159)
T ss_dssp BTTBCTTTCBBCCGGGTTTCCTTCC
T ss_pred ccCCCCCCCEEeChhhhccCCCCCc
Confidence 99998889999998 67888764
No 26
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.64 E-value=4.5e-16 Score=126.04 Aligned_cols=108 Identities=19% Similarity=0.261 Sum_probs=82.2
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcC---CC---CCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCC
Q 030645 22 AGPRDGAAWTQRLKEEYKALIAYTQMNK---SN---DNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTY 93 (174)
Q Consensus 22 agprd~~~w~~RLkeEY~aLikyv~~nk---~~---d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tY 93 (174)
++++.......||.+||+.|.+-....+ .+ ....|.+.+.+++...|.+.+-| +++|++-.|.|+|.+|.+|
T Consensus 25 ~~~~~~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~Y 104 (193)
T 2f4z_A 25 AQPRGTPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDY 104 (193)
T ss_dssp -------CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTT
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcC
Confidence 4455555678999999999987221000 00 02567888877899999999998 8999999999999999999
Q ss_pred CCCCCeeecCCCCCcccccccCceeecc---CCCccccc
Q 030645 94 PATAPELELPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 94 P~tpPeI~fPeldgkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|..||.|+|-.-.-|+|+...+|+|||+ +.|+|.|+
T Consensus 105 P~~PP~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~t 143 (193)
T 2f4z_A 105 PYNPPKMKFVTKIWHPNISSQTGAICLDILKHEWSPALT 143 (193)
T ss_dssp TTSCCEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSC
T ss_pred CCCCCeEEEecCCccCCCcCCCCEEECccccccCCCCCC
Confidence 9999999998777899998889999998 67888764
No 27
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.64 E-value=6.6e-16 Score=120.95 Aligned_cols=98 Identities=16% Similarity=0.146 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHH----HhcCCCC-CCceEEeeCCCCCCeeeeeeee--eeccc--ceeEEEEEecCCCCCCCCCeee
Q 030645 31 TQRLKEEYKALIAYT----QMNKSND-NDWFRISAANPEGTRWTGKCWY--VHNLL--KYEFDLQFDIPVTYPATAPELE 101 (174)
Q Consensus 31 ~~RLkeEY~aLikyv----~~nk~~d-~dwf~Lep~n~dgT~W~gkcw~--~~~~~--kyeF~lefdIP~tYP~tpPeI~ 101 (174)
.+||.+||+.|.+-. +.|.... ...+.+.+.+++...|.+.+-+ .++|+ +..|.++|.+|.+||..||.|+
T Consensus 10 ~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~ 89 (167)
T 4ds2_A 10 NKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVR 89 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEE
T ss_pred HHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEE
Confidence 479999999999866 2222222 5677777756899999999998 88999 9999999999999999999999
Q ss_pred cCCCCCcccccccCceeecc---CCCccccc
Q 030645 102 LPQLDGKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 102 fPeldgkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|..-..|+|+. .+|+|||+ +.|+|.|+
T Consensus 90 f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~ 119 (167)
T 4ds2_A 90 FVTPVYSPLVT-GEGGICDRMVNDFWTPDQH 119 (167)
T ss_dssp ESSCCCCSSCC-TTSCCCTHHHHTTCCTTSC
T ss_pred EeCCcccccCC-CCCEEEcccCcCCCCCCCC
Confidence 98888999995 89999997 88999876
No 28
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.63 E-value=1.2e-15 Score=120.31 Aligned_cols=100 Identities=17% Similarity=0.346 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHHH-HhcCC--CCCCc-eEEee-CCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeec
Q 030645 30 WTQRLKEEYKALIAYT-QMNKS--NDNDW-FRISA-ANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELEL 102 (174)
Q Consensus 30 w~~RLkeEY~aLikyv-~~nk~--~d~dw-f~Lep-~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~f 102 (174)
-..||.+||+.|.+-. ..... .+..| +...| .+.+...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 4689999999997632 11011 12234 46667 45789999999998 8999999999999999999999999999
Q ss_pred CC-CCCcccccccCceeecc----CCCccccc
Q 030645 103 PQ-LDGKTQKMYRGGKICLT----VHFKPLWA 129 (174)
Q Consensus 103 Pe-ldgkt~kmYrgGkICLd----dHf~PlW~ 129 (174)
-. .--|+|+.|.+|+|||+ +.|+|.|+
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~ 118 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWD 118 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCC
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCc
Confidence 87 67899999999999997 57877663
No 29
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.63 E-value=8.5e-16 Score=126.42 Aligned_cols=95 Identities=19% Similarity=0.245 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 030645 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (174)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPel 105 (174)
..-..||.+||+.|.+ +....|++.|.+++...|.+.+-| +++|++-.|.|+|.+|.+||..||.|+|-.-
T Consensus 22 s~a~~RL~kEl~~l~~-------~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~ 94 (216)
T 2pwq_A 22 SKELLRLQKELKDIEN-------ENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTK 94 (216)
T ss_dssp CHHHHHHHHHHHHHHH-------SCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred CHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCC
Confidence 3468999999999876 234668888878899999999998 8999999999999999999999999999877
Q ss_pred CCcccccccCceeecc---CCCccccc
Q 030645 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 106 dgkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
.-|+|+-..+|+|||+ +.|+|.|+
T Consensus 95 i~HPNI~~~~G~ICL~iL~~~WsP~~t 121 (216)
T 2pwq_A 95 IWHPNISSQTGAICLDVLKNEWSPALT 121 (216)
T ss_dssp CCBTTBCTTTCBBCCHHHHHHCCTTCC
T ss_pred CcCCCCcCCCCEEEchhhcccCCCCCc
Confidence 7899998889999998 67888775
No 30
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.63 E-value=5.2e-16 Score=130.59 Aligned_cols=127 Identities=20% Similarity=0.210 Sum_probs=91.2
Q ss_pred hccccceeccCCCCC------hhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeE
Q 030645 12 LTQIPLLSTKAGPRD------GAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEF 83 (174)
Q Consensus 12 ~~~ipl~~~~agprd------~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF 83 (174)
-...+..++++.|.- ...-.+||.+||+.|.+- +......|.+.|.+++...|.+.+-| .++|++-.|
T Consensus 34 ~~~~~~~~~~~~~~~~s~~~Ms~~a~~RL~kEl~~l~~~----~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f 109 (253)
T 3e46_A 34 PDLGTDDDDKAMADIGSEFDMANIAVQRIKREFKEVLKS----EETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRY 109 (253)
T ss_dssp ------------------CCCCHHHHHHHHHHHHHHHHC----HHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEE
T ss_pred ccccccccccccccccccccccHHHHHHHHHHHHHHHhC----CCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEE
Confidence 344455556665542 245789999999998761 11124678899988999999999998 899999999
Q ss_pred EEEEecCCCCCCCCCeeecCCCCCcccccccCceeecc---CCCcccccccCCchhHHHHHhhcccchhh
Q 030645 84 DLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHALCLGLAPWLA 150 (174)
Q Consensus 84 ~lefdIP~tYP~tpPeI~fPeldgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~algl~pwla 150 (174)
.|+|.+|.+||..||.|+|..-.-|+|+...+|+|||+ +.|+|.| +|.++| ++|--.|.
T Consensus 110 ~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ICL~iL~~~WsP~~-------ti~~vL-~sI~~ll~ 171 (253)
T 3e46_A 110 QLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAICLDILKDQWAAAM-------TLRTVL-LSLQALLA 171 (253)
T ss_dssp EEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCBBCCGGGTTCCCTTC-------CHHHHH-HHHHHHHH
T ss_pred EEEEECCCCCCCCCCeeeecCCCccCCccCCCCeeecccccCCCCCCC-------CHHHHH-HHHHHHhc
Confidence 99999999999999999998888999998899999998 6677664 566665 45444443
No 31
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.63 E-value=1.3e-15 Score=120.47 Aligned_cols=86 Identities=15% Similarity=0.208 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 030645 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (174)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPe 104 (174)
..+..||.+||+.|.+ +....|.+.+++ ++...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.
T Consensus 16 ~~~~~rL~kEl~~l~~-------~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T 88 (172)
T 2awf_A 16 PRGSLLLRRQLAELNK-------NPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFIT 88 (172)
T ss_dssp CTTHHHHHHHHHHHHH-------SCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECS
T ss_pred HHHHHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccC
Confidence 3478999999999876 345678888876 699999999998 899999999999999999999999999987
Q ss_pred CCCcccccccCceeecc
Q 030645 105 LDGKTQKMYRGGKICLT 121 (174)
Q Consensus 105 ldgkt~kmYrgGkICLd 121 (174)
-..|+|+ |.+|+|||+
T Consensus 89 ~i~HPNV-~~~G~ICls 104 (172)
T 2awf_A 89 EIWHPNV-DKNGDVCIS 104 (172)
T ss_dssp CCCCTTB-CTTCBBCCG
T ss_pred CCccCCC-CCCCcEehh
Confidence 7789998 578999997
No 32
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.61 E-value=2.9e-15 Score=119.18 Aligned_cols=84 Identities=18% Similarity=0.316 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
-..||.+||+.|.+ +..+.|++. +.+.+...|.+.+-| .++|++-.|.++|.+|..||..||.|+|-.-.
T Consensus 8 a~kRL~kEl~~l~~-------~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i 80 (183)
T 3rz3_A 8 SQKALLLELKGLQE-------EPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKM 80 (183)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCC
Confidence 47899999999876 335567777 434789999999998 89999999999999999999999999998777
Q ss_pred CcccccccCceeecc
Q 030645 107 GKTQKMYRGGKICLT 121 (174)
Q Consensus 107 gkt~kmYrgGkICLd 121 (174)
.|+|+ |.+|+|||+
T Consensus 81 ~HPnV-~~~G~iCls 94 (183)
T 3rz3_A 81 WHPNI-YETGDVCIS 94 (183)
T ss_dssp CCTTB-CTTSBBCCT
T ss_pred ccCCC-CCCCcEehh
Confidence 89998 789999997
No 33
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.61 E-value=1.3e-15 Score=121.97 Aligned_cols=100 Identities=17% Similarity=0.275 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 030645 27 GAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (174)
Q Consensus 27 ~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPe 104 (174)
......||.+||+.|.+. ....|.+.|.+++...|.+.+-| +++|++-.|.|+|.+|.+||..||.|+|-.
T Consensus 28 ~~~~~~RL~kEl~~l~~~-------~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T 100 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMS-------GDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLT 100 (179)
T ss_dssp --CHHHHHHHHHHHHHHH-------CCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred ChHHHHHHHHHHHHHHhC-------CCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEec
Confidence 355889999999999872 23557777766889999999998 899999999999999999999999999988
Q ss_pred CCCcccccccCceeecc---CCCcccccccCCchhHHHHH
Q 030645 105 LDGKTQKMYRGGKICLT---VHFKPLWAKNCPRFGIAHAL 141 (174)
Q Consensus 105 ldgkt~kmYrgGkICLd---dHf~PlW~~n~p~fgiaha~ 141 (174)
-..|+|+. .+|+|||+ +.|+|.| +|.++|
T Consensus 101 ~i~HPNV~-~~G~ICL~iL~~~WsP~~-------ti~~vL 132 (179)
T 1i7k_A 101 PCYHPNVD-TQGNISLDILKEKWSALY-------DVRTIL 132 (179)
T ss_dssp CCCSTTBC-TTCBBCCGGGTTTCCTTC-------CHHHHH
T ss_pred CCccCccc-cCCeEEcccCcCcCCCCC-------CHHHHH
Confidence 88999985 58999998 5677765 566655
No 34
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.60 E-value=2.3e-15 Score=116.82 Aligned_cols=91 Identities=22% Similarity=0.342 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-----CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-----PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-----~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fP 103 (174)
.+||.+||+.|.+ +....|.+.|.+ .+...|.+.+-| +++|++..|.++|.+|.+||..||.|+|-
T Consensus 6 ~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 6 LQRLQEERKKWRK-------DHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp HHHHHHHHHHHHH-------CCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 5799999999886 334566666643 378899999988 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecc---C--CCccccc
Q 030645 104 QLDGKTQKMYRGGKICLT---V--HFKPLWA 129 (174)
Q Consensus 104 eldgkt~kmYrgGkICLd---d--Hf~PlW~ 129 (174)
.---|+|+ |.+|+|||+ . .|+|.|+
T Consensus 79 t~i~HPnv-~~~G~iCl~iL~~~~~W~p~~~ 108 (157)
T 2gjd_A 79 AGFYHPNV-YPSGTICLSILNEDQDWRPAIT 108 (157)
T ss_dssp TTCCCTTB-CTTSBBCCGGGCTTTTCCTTCC
T ss_pred CCCccCCC-CCCCcEeeecccCCCCCCCCCc
Confidence 77789998 589999998 3 5887764
No 35
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.59 E-value=3.9e-15 Score=117.68 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-eEEeeCCC-C--CCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDW-FRISAANP-E--GTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep~n~-d--gT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fP 103 (174)
=..||.+||+.|.+ +..+. |++.++++ | ...|.+.+-| .++|++..|.++|.+|.+||..||.|+|-
T Consensus 26 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 98 (160)
T 2a4d_A 26 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 98 (160)
T ss_dssp HHHHHHHHHHHHHS-------CCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEES
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEe
Confidence 45899999999865 22333 67776553 3 8899999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecc-----CCCccccc
Q 030645 104 QLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (174)
Q Consensus 104 eldgkt~kmYrgGkICLd-----dHf~PlW~ 129 (174)
.-..|+|+...+|+|||+ +.|+|.|+
T Consensus 99 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~t 129 (160)
T 2a4d_A 99 TKINMNGVNSSNGVVDPRAISVLAKWQNSYS 129 (160)
T ss_dssp BCCCCTTBCTTTCBBCGGGSHHHHTCCTTCC
T ss_pred cCceeCCEECCCCEEehhhcCCccCCCccCc
Confidence 777899998789999975 67888763
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.59 E-value=3.7e-15 Score=122.58 Aligned_cols=92 Identities=15% Similarity=0.273 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCC-CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANP-EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~-dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
..||.+||+.|.+ +....|++.|+++ +.+.|.+.+-| +++|++..|.++|.+|.+||..||.|+|-.-..
T Consensus 4 ~~RL~kEl~~l~~-------~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~ 76 (215)
T 1tte_A 4 AKRIMKEIQAVKD-------DPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVY 76 (215)
T ss_dssp HHHHHHHHHHHHT-------TTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCc
Confidence 4799999999876 2346688888665 56799999998 899999999999999999999999999988789
Q ss_pred cccccccCceeecc---CCCccccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+|+-..+|+|||+ +.|+|.|+
T Consensus 77 HPNI~~~~G~ICL~iL~~~WsP~~t 101 (215)
T 1tte_A 77 HPNISSVTGAICLDILRNAWSPVIT 101 (215)
T ss_dssp CSSSCSSSSCCCSSTTTCCSCTTCC
T ss_pred cCcCcCCCCEEECccCCCCCCCcCc
Confidence 99997669999998 67888764
No 37
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.59 E-value=2.4e-15 Score=120.68 Aligned_cols=114 Identities=16% Similarity=0.318 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 030645 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (174)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPel 105 (174)
..+..||.+||+.|.+ +....|.+.|.++|...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 13 ~~a~~RL~kEl~~l~~-------~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~ 85 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKK-------DPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP 85 (187)
T ss_dssp -CHHHHHHHHHHHHHH-------SCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC
T ss_pred cHHHHHHHHHHHHHHh-------CCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC
Confidence 4588999999999886 335678888877899999999998 9999999999999999999999999999653
Q ss_pred CCcccccccCceeeccCC--CcccccccCCchhHHHHHhhcccchhhhhhhh
Q 030645 106 DGKTQKMYRGGKICLTVH--FKPLWAKNCPRFGIAHALCLGLAPWLAAEIPI 155 (174)
Q Consensus 106 dgkt~kmYrgGkICLddH--f~PlW~~n~p~fgiaha~algl~pwla~eip~ 155 (174)
|. ..+.+|+|||+.- +..-|+ |.++|.++| ++|--.|+..-|+
T Consensus 86 --~~-~~~~~G~ICL~iL~~~~~~W~---P~~ti~~vL-~si~sll~~p~p~ 130 (187)
T 2f4w_A 86 --NG-RFKCNTRLCLSITDFHPDTWN---PAWSVSTIL-TGLLSFMVEKGPT 130 (187)
T ss_dssp --CS-SBCTTSCBC----------CC---TTCCHHHHH-HHHHHHHHSCCCC
T ss_pred --Cc-eeccCCeEeeeccccCccCCC---CcCcHHHHH-HHHHHHhcCCCCC
Confidence 22 2346899999821 122332 345777765 5666666655553
No 38
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.58 E-value=3.6e-15 Score=113.60 Aligned_cols=93 Identities=17% Similarity=0.166 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-C--CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-P--EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~--dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPel 105 (174)
..||.+||+.|.+- .....|++.+.+ + +..+|.+.+-| .++|++..|.++|.+|.+||..||.|+|-.-
T Consensus 8 ~~RL~kEl~~l~~~------~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 81 (138)
T 1jat_B 8 NFRLLEELEKGEKG------FGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISK 81 (138)
T ss_dssp HHHHHHHHHHHHC----------CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred HHHHHHHHHHHHhc------CCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcc
Confidence 47999999998752 124567777754 2 38899999998 8999999999999999999999999999877
Q ss_pred CCcccccccCcee--ecc--CCCccccc
Q 030645 106 DGKTQKMYRGGKI--CLT--VHFKPLWA 129 (174)
Q Consensus 106 dgkt~kmYrgGkI--CLd--dHf~PlW~ 129 (174)
..|+|+...||+| ||+ ..|+|.|+
T Consensus 82 i~HPnv~~~~G~i~~cL~~l~~W~p~~~ 109 (138)
T 1jat_B 82 INLPCVNPTTGEVQTDFHTLRDWKRAYT 109 (138)
T ss_dssp CCCTTBCTTTCBBCTTSHHHHTCCTTCC
T ss_pred cccCCEeCCCCEEeeecccCCCCCCcCc
Confidence 7899998889999 998 68888774
No 39
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.58 E-value=9.1e-15 Score=112.82 Aligned_cols=96 Identities=20% Similarity=0.323 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEE-eeCCCCCCeeeeeeee-eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRI-SAANPEGTRWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~L-ep~n~dgT~W~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
..||.+||+.|.+ +....|.+ .+.+.+...|.+.+-- +++|++..|.++|.+|.+||..||.|+|-.-..|
T Consensus 6 ~~RL~kEl~~l~~-------~~~~~i~~~~~~~~~l~~w~~~I~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (155)
T 1wzv_A 6 SMRVVKELEDLQK-------KPPPYLRNLSSDDANVLVWHALLLPDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYH 78 (155)
T ss_dssp HHHHHHHHHHHHH-------SCCTTEEEEEECSSCTTEEEEEECCCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEecCCCchheEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCcc
Confidence 4799999999886 23456766 6756899999998864 8899999999999999999999999999887899
Q ss_pred ccccccCceeecc----CCCcccccccCCchhHHHHH
Q 030645 109 TQKMYRGGKICLT----VHFKPLWAKNCPRFGIAHAL 141 (174)
Q Consensus 109 t~kmYrgGkICLd----dHf~PlW~~n~p~fgiaha~ 141 (174)
+|+. .+|+|||+ +.|+|.| +|.+.|
T Consensus 79 PnV~-~~G~iCl~iL~~~~W~p~~-------~i~~vl 107 (155)
T 1wzv_A 79 PNVD-ENGQICLPIISSENWKPCT-------KTCQVL 107 (155)
T ss_dssp TTBC-TTCBCCCGGGCTTTCCTTC-------CHHHHH
T ss_pred CcCC-CCCeEeecCCCccCCCCCC-------cHHHHH
Confidence 9985 59999997 5677665 566654
No 40
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.57 E-value=6.7e-15 Score=114.76 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
=..||.+||+.|.+ +..+.|.+.+.+ ++...|.+.+ + .++|++..|.++|.+|.+||..||.|+|-.--
T Consensus 15 ~~~RL~kEl~~l~~-------~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 86 (167)
T 3fn1_B 15 RDKLLVKEVAELEA-------NLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKI 86 (167)
T ss_dssp HHHHHHHHHHHHGG-------GSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCC
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCc
Confidence 47899999999876 234567777544 6799999998 6 88999999999999999999999999998878
Q ss_pred CcccccccCceeecc---C------CCccccc
Q 030645 107 GKTQKMYRGGKICLT---V------HFKPLWA 129 (174)
Q Consensus 107 gkt~kmYrgGkICLd---d------Hf~PlW~ 129 (174)
.|+|+ |.+|+|||+ . .|+|.|+
T Consensus 87 ~HPnv-~~~G~iCl~iL~~~~~~~~~W~p~~~ 117 (167)
T 3fn1_B 87 WHPNI-TETGEICLSLLREHSIDGTGWAPTRT 117 (167)
T ss_dssp CCSSB-CTTCCBCCGGGSBCSSSTTSBCTTCC
T ss_pred ccCCC-CCCCEEechhhccCCCCCCCCCCcCc
Confidence 99999 489999998 3 5887754
No 41
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.57 E-value=1.8e-15 Score=117.41 Aligned_cols=88 Identities=15% Similarity=0.245 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 030645 32 QRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (174)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (174)
.||.+||+.|.+ + -+.+.+.+++...|.+.+-| .++|++..|.++|.+|.+||..||.|+|-.-.-|+
T Consensus 5 ~Rl~kEl~~l~~---~-------~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HP 74 (152)
T 2onu_A 5 TRKQCDFTKLIM---A-------GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHP 74 (152)
T ss_dssp CHHHHTHHHHHH---H-------TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHhcCc---C-------CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccC
Confidence 599999999876 1 25566767899999999987 89999999999999999999999999998777899
Q ss_pred cccccCceeecc---CCCccccc
Q 030645 110 QKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 110 ~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+...+|+|||+ +.|+|.|+
T Consensus 75 ni~~~~G~iCl~il~~~W~p~~~ 97 (152)
T 2onu_A 75 NVDEASGSVCLDVINQTWTPLYS 97 (152)
T ss_dssp TBCTTTCBBCHHHHHHHCCTTCC
T ss_pred cCcCcCCeEecccccccCCCCCC
Confidence 998889999998 67888763
No 42
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.56 E-value=1.6e-15 Score=121.83 Aligned_cols=97 Identities=15% Similarity=0.208 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee---eecccc-----------eeEEEEEecCCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY---VHNLLK-----------YEFDLQFDIPVTYP 94 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~---~~~~~k-----------yeF~lefdIP~tYP 94 (174)
.-..||.+||+.|.+-- ..+..+|++.|++++...|.+.+.+ .++|.+ -.|.|+|.+|.+||
T Consensus 27 ~a~~RL~kEl~~l~~~~----~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP 102 (186)
T 1zuo_A 27 QASDRLMKELRDIYRSQ----SYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFP 102 (186)
T ss_dssp HHHHHHHHHHHHHHTSH----HHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTT
T ss_pred HHHHHHHHHHHHHHhCC----CCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCC
Confidence 46799999999987511 0014788888878999999999997 589988 78999999999999
Q ss_pred CCCCeeecCCCCCcccccccCceeecc----CCCccccc
Q 030645 95 ATAPELELPQLDGKTQKMYRGGKICLT----VHFKPLWA 129 (174)
Q Consensus 95 ~tpPeI~fPeldgkt~kmYrgGkICLd----dHf~PlW~ 129 (174)
..||.|+|-.-..|+|-.|.+|+|||+ +.|+|.|+
T Consensus 103 ~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~t 141 (186)
T 1zuo_A 103 FDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYS 141 (186)
T ss_dssp SSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSC
T ss_pred CCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcCc
Confidence 999999996666788544689999997 46887764
No 43
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.56 E-value=1.1e-14 Score=113.80 Aligned_cols=90 Identities=18% Similarity=0.247 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQL 105 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPel 105 (174)
....||.+||+.| ++ .+.|++. |.++|...|.+.+ + .++|++-.|.++|.+|.+||..||.|+|-.-
T Consensus 6 ~~~~RL~kEl~~l------~~---~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 75 (160)
T 1y8x_A 6 AAQLRIQKDINEL------NL---PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETM 75 (160)
T ss_dssp HHHHHHHHHHHTC------CC---CTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSC
T ss_pred HHHHHHHHHHHhc------CC---CCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecC
Confidence 4689999999998 11 3457776 6568999999988 7 8999999999999999999999999999877
Q ss_pred CCcccccccCceeecc---CCCccccc
Q 030645 106 DGKTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 106 dgkt~kmYrgGkICLd---dHf~PlW~ 129 (174)
..|+|+. .+|+|||+ +.|+|.|+
T Consensus 76 i~HPnv~-~~G~iCl~iL~~~W~p~~~ 101 (160)
T 1y8x_A 76 VYHPNID-LEGNVCLNILREDWKPVLT 101 (160)
T ss_dssp CCBTTBC-TTCBBCCGGGTTTCCTTCC
T ss_pred CccCcCC-CCCeEEcccchhhccCCCC
Confidence 7999985 57999998 78988764
No 44
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.56 E-value=7.4e-15 Score=114.39 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-----CCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeec
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-----PEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELEL 102 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-----~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~f 102 (174)
=..||.+||+.|.+ +..+.|.+.|.. .+...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|
T Consensus 8 a~~RL~kE~~~l~~-------~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 80 (161)
T 2grr_A 8 ALSRLAQERKAWRK-------DHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKF 80 (161)
T ss_dssp HHHHHHHHHHHHHH-------SCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEE
T ss_pred HHHHHHHHHHHHHh-------CCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEE
Confidence 46899999999886 234567666642 578999999988 8899999999999999999999999999
Q ss_pred CCCCCcccccccCceeecc---C--CCccccc
Q 030645 103 PQLDGKTQKMYRGGKICLT---V--HFKPLWA 129 (174)
Q Consensus 103 Peldgkt~kmYrgGkICLd---d--Hf~PlW~ 129 (174)
-.---|+|+. .+|+|||+ . .|+|.|+
T Consensus 81 ~t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~ 111 (161)
T 2grr_A 81 EPPLFHPNVY-PSGTVCLSILEEDKDWRPAIT 111 (161)
T ss_dssp SSCCCSTTBC-TTSBBCCGGGCTTTTCCTTCC
T ss_pred ecCcccCCCC-CCCeEeehhcCCCCCcCCCCc
Confidence 8767899986 89999998 2 5887763
No 45
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.54 E-value=1e-14 Score=115.82 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCc-eEEeeCCC-C--CCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDW-FRISAANP-E--GTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dw-f~Lep~n~-d--gT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fP 103 (174)
-..||.+||+.|.+ +..+. |++.++++ | ...|.+.+-| .++|++..|.++|.+|.+||..||.|+|-
T Consensus 36 ~~~RL~kEl~~l~~-------~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~ 108 (170)
T 2hlw_A 36 RNFRLLEELEEGQK-------GVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFV 108 (170)
T ss_dssp HHHHHHHHHHHHHH-------CCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEEC
T ss_pred HHHHHHHHHHHHHh-------CCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEe
Confidence 46899999999876 22233 67766443 3 8899999998 89999999999999999999999999998
Q ss_pred CCCCcccccccCceeecc-----CCCccccc
Q 030645 104 QLDGKTQKMYRGGKICLT-----VHFKPLWA 129 (174)
Q Consensus 104 eldgkt~kmYrgGkICLd-----dHf~PlW~ 129 (174)
.-..|+|+...+|+|||+ +.|+|.|+
T Consensus 109 T~i~HPNV~~~~G~ICl~iL~~~~~WsP~~t 139 (170)
T 2hlw_A 109 TKINMNGVNSSNGVVDPRAISVLAKWQNSYS 139 (170)
T ss_dssp BCCCCSSBCSSSCBBCTTTCHHHHTCCSSCC
T ss_pred cccccCCEeCCCCEEEhhhcCCCCCCCccCc
Confidence 777999998899999965 67888763
No 46
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.53 E-value=1.4e-14 Score=116.49 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEe----eCCCCCC---eeeeeeee-eecccceeEEEEEecCCCCCCCCCee
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRIS----AANPEGT---RWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPEL 100 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le----p~n~dgT---~W~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPeI 100 (174)
.=..||.+||+.|. ....+.+. |.++|.. .|.+.+-. .++|++..|.++|.+|.+||..||.|
T Consensus 29 ~a~~RL~kEl~~l~---------~~~~i~~~~~~~p~~~nl~~~~~w~~~I~p~~tpyegg~f~~~i~fp~~YP~~PP~v 99 (190)
T 3o2u_A 29 AARIRLKRDLDSLD---------LPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKV 99 (190)
T ss_dssp HHHHHHHHHHHTCC---------CCTTEEEEEEECTTCCCTTSCCEEEEEECCSSSTTTTCCEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHhcc---------CCCCEEEEecCCCCCccCCcCCeEEEEEcCCCCCCCCCEEEEEEECCCCCCCCCcee
Confidence 35799999999975 23567776 6568888 99999866 79999999999999999999999999
Q ss_pred ecCCCCCcccccccCceeecc---CCCccccccc
Q 030645 101 ELPQLDGKTQKMYRGGKICLT---VHFKPLWAKN 131 (174)
Q Consensus 101 ~fPeldgkt~kmYrgGkICLd---dHf~PlW~~n 131 (174)
+|-.-..|+|+ |.+|+|||+ +.|+|.|+-.
T Consensus 100 ~f~t~i~HPnV-~~~G~iCl~iL~~~W~p~~~i~ 132 (190)
T 3o2u_A 100 VCLKKIFHPNI-DLKGNVCLNILREDWSPALDLQ 132 (190)
T ss_dssp EECSCCCCTTB-CTTSBBCCGGGTTTCCTTCCHH
T ss_pred EEecCcccCCC-CCCCeEechhccCCCCCCCCHH
Confidence 99887799999 479999998 8899987543
No 47
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.53 E-value=2.3e-14 Score=114.41 Aligned_cols=92 Identities=16% Similarity=0.198 Sum_probs=78.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCceEEe-eCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 030645 28 AAWTQRLKEEYKALIAYTQMNKSNDNDWFRIS-AANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (174)
Q Consensus 28 ~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Le-p~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPe 104 (174)
.....||.+||+.| ++ .+.+++. |.++|...|.+.+ + .++|++-.|.++|.+|.+||..||.|.|-.
T Consensus 25 ~~~~~RL~kEl~~l------~~---~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t 94 (180)
T 2nvu_C 25 SAAQLRIQKDINEL------NL---PKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCET 94 (180)
T ss_dssp CHHHHHHHHHHHTC------CC---CTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECS
T ss_pred cHHHHHHHHHHHhc------CC---CCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceec
Confidence 34789999999998 11 3457776 6568999999998 7 899999999999999999999999999987
Q ss_pred CCCcccccccCceeecc---CCCcccccc
Q 030645 105 LDGKTQKMYRGGKICLT---VHFKPLWAK 130 (174)
Q Consensus 105 ldgkt~kmYrgGkICLd---dHf~PlW~~ 130 (174)
-..|+|+. .+|+|||+ +.|+|.|+-
T Consensus 95 ~i~HPNV~-~~G~iCl~iL~~~W~p~~~i 122 (180)
T 2nvu_C 95 MVYHPNID-LEGNVALNILREDWKPVLTI 122 (180)
T ss_dssp CCCBTTBC-TTSBBCCGGGTTSCCTTCCH
T ss_pred cCccCCCC-CCCcEEcccccccCCCCCCH
Confidence 77899985 68999997 789988743
No 48
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.52 E-value=1.4e-14 Score=116.35 Aligned_cols=92 Identities=14% Similarity=0.203 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCC
Q 030645 29 AWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLD 106 (174)
Q Consensus 29 ~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeld 106 (174)
....||.+||+.|.+ +-|++.+. +|...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.-.
T Consensus 25 ~a~~RL~kEl~~l~~----------~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i 93 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE----------SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKI 93 (179)
T ss_dssp HHHHHHHHHHHHHHH----------SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred HHHHHHHHHHHhcCc----------CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCC
Confidence 368999999999974 23556664 578999999988 89999999999999999999999999998777
Q ss_pred CcccccccCceeecc---CCCccccccc
Q 030645 107 GKTQKMYRGGKICLT---VHFKPLWAKN 131 (174)
Q Consensus 107 gkt~kmYrgGkICLd---dHf~PlW~~n 131 (174)
-|+|+.-.+|+|||+ +.|+|.|+-.
T Consensus 94 ~HPNV~~~~G~ICL~iL~~~WsP~~ti~ 121 (179)
T 2z5d_A 94 FHPNIDEASGTVCLDVINQTWTALYDLT 121 (179)
T ss_dssp CBTTBCTTTCBBCHHHHHHHCCTTCCTT
T ss_pred ccCcCCCCCCeEeccccccCCCCCCCHH
Confidence 899995459999998 7899887543
No 49
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.51 E-value=2.3e-14 Score=113.61 Aligned_cols=89 Identities=15% Similarity=0.227 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDG 107 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldg 107 (174)
...||.+||+.|.+ + . +.+.+ +++...|.+.+-| +++|++-.|.++|.+|.+||..||.|+|-.-.-
T Consensus 13 ~~~RL~~El~~l~~----~---~---~~v~~-~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~ 81 (171)
T 1yf9_A 13 SNRRREMDYMRLCN----S---T---RKVYP-SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRIL 81 (171)
T ss_dssp CCHHHHHHHHHHHS----S---S---SCEEE-CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred HHHHHHHHHHHHHh----C---C---CCCCC-CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcc
Confidence 45899999999875 1 1 22444 7899999999988 899999999999999999999999999987778
Q ss_pred cccccccCceeecc---CCCccccc
Q 030645 108 KTQKMYRGGKICLT---VHFKPLWA 129 (174)
Q Consensus 108 kt~kmYrgGkICLd---dHf~PlW~ 129 (174)
|+|+...+|+|||+ +.|+|.|+
T Consensus 82 HPNi~~~~G~iCl~iL~~~W~p~~~ 106 (171)
T 1yf9_A 82 HPNVDERSGSVCLDVINQTWTPMYQ 106 (171)
T ss_dssp BTTBCTTTCBBCHHHHHHHCCTTCC
T ss_pred cccCcccCCeEeccccccCCCCCCc
Confidence 99998789999998 68998874
No 50
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.51 E-value=4.8e-14 Score=110.50 Aligned_cols=93 Identities=12% Similarity=0.126 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCC-C--CCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCC
Q 030645 30 WTQRLKEEYKALIAYTQMNKSNDNDWFRISAAN-P--EGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQ 104 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n-~--dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPe 104 (174)
=..||.+||+.|.+- .....|++.+++ + +...|.+.+-| .++|++-.|.++|.+|.+||..||.|+|-.
T Consensus 22 ~~~RL~kEl~~l~~~------~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t 95 (156)
T 2q0v_A 22 RSFRLLDELERGQKG------NVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDT 95 (156)
T ss_dssp HHHHHHHHHHHHHCC-------CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred HHHHHHHHHHHHHhC------CCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEc
Confidence 358999999998651 134577777754 2 38999999998 899999999999999999999999999987
Q ss_pred CCCcccccccCcee---ecc--CCCccccc
Q 030645 105 LDGKTQKMYRGGKI---CLT--VHFKPLWA 129 (174)
Q Consensus 105 ldgkt~kmYrgGkI---CLd--dHf~PlW~ 129 (174)
-..|+|+ |.+|+| ||+ ..|+|.|+
T Consensus 96 ~i~HPNV-~~~G~icisCL~iL~~WsP~~t 124 (156)
T 2q0v_A 96 KIEMSCV-DNCGRVIKNNLHILKNWNRNYT 124 (156)
T ss_dssp CCCCTTB-CTTSBBCGGGSHHHHTCCTTCC
T ss_pred ccccCCC-ccCCeEehhhcccccCCCCcCc
Confidence 7789998 467999 887 45888763
No 51
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.49 E-value=5.4e-14 Score=123.16 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCeeecCCCCCc
Q 030645 31 TQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGK 108 (174)
Q Consensus 31 ~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgk 108 (174)
.+||.+||+.|.+ +....|++.|.+++...|.+.+-| .++|++-.|.++|.+|..||..||.|+|-.-..|
T Consensus 5 ~~RL~kEl~~l~~-------~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 77 (399)
T 4ddg_A 5 LKRIHKELNDLAR-------DPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 77 (399)
T ss_dssp HHHHHHHHHHHHH-------SCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCC
T ss_pred HHHHHHHHHHHHh-------CCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccc
Confidence 5899999999887 335678888878899999999998 8999999999999999999999999999887899
Q ss_pred ccccccCceeecc---CCCcccccc
Q 030645 109 TQKMYRGGKICLT---VHFKPLWAK 130 (174)
Q Consensus 109 t~kmYrgGkICLd---dHf~PlW~~ 130 (174)
+|+. .+|+|||+ +.|+|.|+-
T Consensus 78 Pnv~-~~G~iCl~il~~~W~p~~~i 101 (399)
T 4ddg_A 78 PNIN-SNGSISLDILRSQWSPALTI 101 (399)
T ss_dssp TTBC-TTCBBCCGGGTTSCCTTCCH
T ss_pred cccC-CCCeEeCcccccCCCccccH
Confidence 9985 79999998 779888753
No 52
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.48 E-value=3.7e-14 Score=109.33 Aligned_cols=90 Identities=20% Similarity=0.313 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCceEEee-CCCCCCeeeeeeee-eecccceeEEEEEecCCCCCCCCCeeecCCCCCcc
Q 030645 32 QRLKEEYKALIAYTQMNKSNDNDWFRISA-ANPEGTRWTGKCWY-VHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKT 109 (174)
Q Consensus 32 ~RLkeEY~aLikyv~~nk~~d~dwf~Lep-~n~dgT~W~gkcw~-~~~~~kyeF~lefdIP~tYP~tpPeI~fPeldgkt 109 (174)
.||.+||+.|.+ +....|++.+ .+.+...|.+.+-- +++|++-.|.++|.+|.+||..||.|+|-.-..|+
T Consensus 5 ~RL~kEl~~l~~-------~~~~~~~~~~~~~~~l~~w~~~i~P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 77 (154)
T 1c4z_D 5 RRLMKELEEIRK-------CGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHP 77 (154)
T ss_dssp TTHHHHHTTCSS-------SCCSSCEEECSSCSSSSEEEEEECCCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred HHHHHHHHHHHh-------CCCCCEEEeeCCCCchheEEEEEeCCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccc
Confidence 599999998754 2335565433 34789999998753 78999999999999999999999999998777999
Q ss_pred cccccCceeecc----CCCccccc
Q 030645 110 QKMYRGGKICLT----VHFKPLWA 129 (174)
Q Consensus 110 ~kmYrgGkICLd----dHf~PlW~ 129 (174)
|+. .+|+|||+ ++|+|.|+
T Consensus 78 nv~-~~G~iCl~iL~~~~W~p~~~ 100 (154)
T 1c4z_D 78 NID-EKGQVCLPVISAENWKPATK 100 (154)
T ss_dssp TBC-TTCBBCCTTTSSSSCCTTCC
T ss_pred cCC-CCCEEECCCCCCCCCCCCCc
Confidence 986 68999997 57888764
No 53
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.46 E-value=3.7e-13 Score=117.39 Aligned_cols=103 Identities=18% Similarity=0.234 Sum_probs=82.5
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCCCCCCceEEeeCCCCCCeeeeeeee--eecccceeEEEEEecCCCCCCCCCe
Q 030645 22 AGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWY--VHNLLKYEFDLQFDIPVTYPATAPE 99 (174)
Q Consensus 22 agprd~~~w~~RLkeEY~aLikyv~~nk~~d~dwf~Lep~n~dgT~W~gkcw~--~~~~~kyeF~lefdIP~tYP~tpPe 99 (174)
++......+..||.+||+.|.+-.-. .-...+.+.+.+++...|.+.+-| +++|++-.|.|+|.+|.+||..||.
T Consensus 69 ~~~~~s~~~~kRL~kEl~~L~k~~p~---g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~ 145 (323)
T 3ceg_A 69 ANDANSAARARRLAQEAVTLSTSLPL---SSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPL 145 (323)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHCCC---CSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCE
T ss_pred cCCCCCHHHHHHHHHHHHHHHhCCCC---CcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCe
Confidence 44555678999999999999873211 112244455546789999999988 8999999999999999999999999
Q ss_pred eecCCC-----CCcccccccCceeecc----------CCCcccc
Q 030645 100 LELPQL-----DGKTQKMYRGGKICLT----------VHFKPLW 128 (174)
Q Consensus 100 I~fPel-----dgkt~kmYrgGkICLd----------dHf~PlW 128 (174)
|+|... --|+|+ |.+|+|||+ +.|+|.+
T Consensus 146 V~F~T~~g~~~ifHPNV-~~~G~ICLsiL~~~~g~~~e~WsPa~ 188 (323)
T 3ceg_A 146 VNLETTGGHSVRFNPNL-YNDGKVCLSILNTWHGRPEEKWNPQT 188 (323)
T ss_dssp EEECCSTTTTCCCBTTB-CTTCBBCCGGGTSSCCCGGGSCCTTT
T ss_pred EEEeccCCCcccccCCC-CcCCeEechhhccccCCCcCCCCcCc
Confidence 999876 468988 589999997 3688887
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=97.92 E-value=1.2e-05 Score=64.22 Aligned_cols=63 Identities=19% Similarity=0.227 Sum_probs=46.5
Q ss_pred CCCCeeeeeeee---eecccc---eeEEEEEecCCCCCCCCCeeecCC--CC---------CcccccccCceeecc--CC
Q 030645 63 PEGTRWTGKCWY---VHNLLK---YEFDLQFDIPVTYPATAPELELPQ--LD---------GKTQKMYRGGKICLT--VH 123 (174)
Q Consensus 63 ~dgT~W~gkcw~---~~~~~k---yeF~lefdIP~tYP~tpPeI~fPe--ld---------gkt~kmYrgGkICLd--dH 123 (174)
.||+.=.=.||. ..+|.+ |.|.|+|.||.+||..||.|-|-. .+ .|.++ ...|+|||+ .+
T Consensus 57 ~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnV-D~~G~I~lpyL~~ 135 (162)
T 3r3q_A 57 SDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYI-DSNGWIALPILHA 135 (162)
T ss_dssp TTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHB-CTTSBBCCGGGGS
T ss_pred CCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCC-CCCCcEeCccccc
Confidence 477643334444 456765 889999999999999999998832 22 26666 468999998 67
Q ss_pred Ccc
Q 030645 124 FKP 126 (174)
Q Consensus 124 f~P 126 (174)
|+|
T Consensus 136 W~p 138 (162)
T 3r3q_A 136 WDP 138 (162)
T ss_dssp CCG
T ss_pred CCC
Confidence 887
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=97.08 E-value=0.00054 Score=53.79 Aligned_cols=63 Identities=21% Similarity=0.125 Sum_probs=46.5
Q ss_pred CCCCeeeeeeeeeecccceeEEEEEecCCCCCCCCCeeecCC-CC----CcccccccCceeecc--CCCcc
Q 030645 63 PEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELELPQ-LD----GKTQKMYRGGKICLT--VHFKP 126 (174)
Q Consensus 63 ~dgT~W~gkcw~~~~~~kyeF~lefdIP~tYP~tpPeI~fPe-ld----gkt~kmYrgGkICLd--dHf~P 126 (174)
.++-.|.|.+=-.+.-..|.+-|.|-||.+||..||-+-+-+ .+ .|.++. ..|+|||. .+|++
T Consensus 51 ~~LL~l~GtIpv~y~g~~y~iPi~Iwlp~~YP~~pP~vfv~pt~~m~I~~~~~Vd-~~G~i~lpyL~~W~~ 120 (146)
T 3obq_A 51 RELMNLTGTIPVPYRGNTYNIPICLWLLDTYPYNPPICFVKPTSSMTIKTGKHVD-ANGKIYLPYLHEWKH 120 (146)
T ss_dssp CEEEEEEEEEEEECSSCEEEEEEEEECCTTTTTSCCEEEECCCTTEEECCBTTBC-TTCBBCCHHHHTCCT
T ss_pred heEEEEEEEeeeeecCccccceEEEEeCccCCCCCCEEEEeCCCCCEECCCCCCC-CCCCEecccccccCC
Confidence 566678887765555566788889999999999999995522 11 355654 58999998 66887
No 56
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.72 E-value=0.11 Score=37.92 Aligned_cols=22 Identities=36% Similarity=0.797 Sum_probs=20.1
Q ss_pred eeEEEEEecCCCCCCCCCeeec
Q 030645 81 YEFDLQFDIPVTYPATAPELEL 102 (174)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~f 102 (174)
..+.|.|..|.+||.+||.|.+
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l 84 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDL 84 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEE
T ss_pred eEEEEEEECCCCCCCCCCcEEE
Confidence 4689999999999999999987
No 57
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.99 E-value=0.035 Score=40.25 Aligned_cols=22 Identities=32% Similarity=0.567 Sum_probs=20.2
Q ss_pred eeEEEEEecCCCCCCCCCeeec
Q 030645 81 YEFDLQFDIPVTYPATAPELEL 102 (174)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~f 102 (174)
..+.|.|..|.+||.+||.|.+
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l 76 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEI 76 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEE
Confidence 4789999999999999999987
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=93.22 E-value=0.06 Score=39.61 Aligned_cols=24 Identities=38% Similarity=0.690 Sum_probs=21.5
Q ss_pred ceeEEEEEecCCCCCCCCCeeecC
Q 030645 80 KYEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 80 kyeF~lefdIP~tYP~tpPeI~fP 103 (174)
...+.|.|..|.+||.+||.|.+-
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~ 84 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFK 84 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEE
T ss_pred ceEEEEEEECCCCCCCCCCeEEEe
Confidence 358899999999999999999884
No 59
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.93 E-value=0.057 Score=39.33 Aligned_cols=23 Identities=30% Similarity=0.785 Sum_probs=20.6
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q 030645 81 YEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fP 103 (174)
..+.|.|..|.+||.+||.|.+-
T Consensus 56 ~~~~L~~~~p~~YP~~~P~i~l~ 78 (128)
T 2ebk_A 56 IPLELVFHLPVNYPSCLPGISIN 78 (128)
T ss_dssp CEEEEEEEECSSTTSSCCCCCCC
T ss_pred eEEEEEEECCCCCCCCCCeEEEE
Confidence 47999999999999999999765
No 60
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=92.87 E-value=0.066 Score=38.78 Aligned_cols=23 Identities=26% Similarity=0.693 Sum_probs=20.6
Q ss_pred eeEEEEEecCCCCCCCCCeeecC
Q 030645 81 YEFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fP 103 (174)
..+.|.|..|.+||.++|.|.+-
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~ 81 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIR 81 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEE
Confidence 47899999999999999999774
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.64 E-value=0.063 Score=40.50 Aligned_cols=24 Identities=33% Similarity=0.621 Sum_probs=20.9
Q ss_pred eeEEEEEecCCCCCCCCCeeecCC
Q 030645 81 YEFDLQFDIPVTYPATAPELELPQ 104 (174)
Q Consensus 81 yeF~lefdIP~tYP~tpPeI~fPe 104 (174)
..+.|.|.+|.+||.+||.|.+-.
T Consensus 73 ~~l~L~v~lP~~YP~~~P~i~l~~ 96 (152)
T 2dax_A 73 AMFSLACILPFKYPAVLPEITVRS 96 (152)
T ss_dssp EEEEEEEEECSSTTSSCCCCEEEC
T ss_pred ceEEEEEECCCCCCCCCCeEEEEc
Confidence 368999999999999999998743
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=90.98 E-value=0.14 Score=39.13 Aligned_cols=22 Identities=36% Similarity=0.483 Sum_probs=20.1
Q ss_pred eEEEEEecCCCCCCCCCeeecC
Q 030645 82 EFDLQFDIPVTYPATAPELELP 103 (174)
Q Consensus 82 eF~lefdIP~tYP~tpPeI~fP 103 (174)
.+.|+|..|.+||.+||.|.+-
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~ 97 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGR 97 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEE
T ss_pred eEEEEEEcCCCCCCCCCcEEEE
Confidence 7999999999999999999764
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=72.17 E-value=4.3 Score=33.00 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=30.3
Q ss_pred CceEEeeCCCCCCeeeeeeeeeecccceeEEEEEecCCCCCCCCCeee
Q 030645 54 DWFRISAANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPATAPELE 101 (174)
Q Consensus 54 dwf~Lep~n~dgT~W~gkcw~~~~~~kyeF~lefdIP~tYP~tpPeI~ 101 (174)
.|=+|..++++.+.=+=++ ..-.+=+..|++.++..||..||.+.
T Consensus 14 GW~~l~~id~~~~~i~l~~---~D~~gR~H~l~v~l~~~yp~~~P~~~ 58 (186)
T 3zqs_A 14 GWDKLVYADTCFSTIKLKA---EDASGREHLITLKLKAKYPAESPDYF 58 (186)
T ss_dssp CGGGEEEECTTSSEEEEEE---ECTTSCEEEEEEECCTTTTTSCCEEE
T ss_pred CCceeeeecCCccEEEEEE---EeCCCCeEEEEEEECCCCCCCCCeeE
Confidence 4545555555555544443 22233488999999999999999885
No 64
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=36.33 E-value=22 Score=25.81 Aligned_cols=17 Identities=24% Similarity=0.167 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHH
Q 030645 30 WTQRLKEEYKALIAYTQ 46 (174)
Q Consensus 30 w~~RLkeEY~aLikyv~ 46 (174)
=++++||+|..+++|+-
T Consensus 73 ~V~~~Ke~Yl~~rr~~~ 89 (93)
T 3t98_B 73 NVKVLKEQYLSYRKMFL 89 (93)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 47899999999999983
No 65
>2blf_B SORB, sulfite\:cytochrome C oxidoreductase subunit B; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_B* 2c9x_B* 2ca3_B* 2ca4_B*
Probab=21.22 E-value=1.2e+02 Score=20.12 Aligned_cols=26 Identities=19% Similarity=0.377 Sum_probs=19.8
Q ss_pred CCCChhHHHH---HHH---------HHHHHHHHHHHhc
Q 030645 23 GPRDGAAWTQ---RLK---------EEYKALIAYTQMN 48 (174)
Q Consensus 23 gprd~~~w~~---RLk---------eEY~aLikyv~~n 48 (174)
+.++.+.|.. |+. +|.+.|+.||..|
T Consensus 43 ~~~~~~~W~~~v~~M~~~~g~~ls~~e~~~I~~YL~~~ 80 (81)
T 2blf_B 43 PGKGQAFWDAEVQKMIKVYHAPVDEADAKAIADYLAKT 80 (81)
T ss_dssp TTCCHHHHHHHHHHHHHTSCCCCCHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHh
Confidence 3467788985 665 5888999999765
No 66
>2j5d_A BNIP3 TM, BCL2/adenovirus E1B 19 kDa protein-interacting protein 3; membrane protein, mitochondrion, transmembrane, transmembrane domain, membrane; NMR {Homo sapiens} PDB: 2ka1_A 2ka2_A
Probab=20.25 E-value=27 Score=22.98 Aligned_cols=17 Identities=29% Similarity=0.714 Sum_probs=12.5
Q ss_pred CchhHHHHHhhcccchh
Q 030645 133 PRFGIAHALCLGLAPWL 149 (174)
Q Consensus 133 p~fgiaha~algl~pwl 149 (174)
|--=+.|.|++|||=..
T Consensus 22 psll~shiL~~GlgIyI 38 (45)
T 2j5d_A 22 PSLLLSHLLAIGLGIYI 38 (45)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcceEEe
Confidence 44457899999998543
Done!