BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030650
MVVAISEENPRTRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSI
NSSNLPALGTKRSQSVDRRRQLSTITRMLITSTRSLSVSFQGETFSLPISKTKAKATPET
RRGTPVRDQPWPGRTQQGNPICQGCWILVLRRRLNSMRTPPRTRTKEELKEAYI

High Scoring Gene Products

Symbol, full name Information P value
QWRF2
QWRF domain containing 2 		protein from Arabidopsis thaliana 9.0e-15
SCO3
AT3G19570 		protein from Arabidopsis thaliana 3.0e-14

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030650
        (174 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2007233 - symbol:QWRF2 "QWRF domain containing...   198  9.0e-15   1
TAIR|locus:2091166 - symbol:SCO3 "AT3G19570" species:3702...   193  3.0e-14   1


>TAIR|locus:2007233 [details] [associations]
            symbol:QWRF2 "QWRF domain containing 2" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            EMBL:CP002684 InterPro:IPR007573 Pfam:PF04484
            ProtClustDB:CLSN2688614 EMBL:AY046022 EMBL:BT000999 IPI:IPI00520366
            RefSeq:NP_564558.1 UniGene:At.17869 PaxDb:Q94AI1 PRIDE:Q94AI1
            EnsemblPlants:AT1G49890.1 GeneID:841412 KEGG:ath:AT1G49890
            TAIR:At1g49890 eggNOG:NOG256361 InParanoid:Q94AI1 OMA:NSAVDVM
            PhylomeDB:Q94AI1 ArrayExpress:Q94AI1 Genevestigator:Q94AI1
            Uniprot:Q94AI1
        Length = 659

 Score = 198 (74.8 bits), Expect = 9.0e-15, P = 9.0e-15
 Identities = 58/120 (48%), Positives = 68/120 (56%)

Query:    66 PALGTKRSQSVDRRR----------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKA- 114
             P+L  KRSQSVDRRR          ++S  T+MLITSTRSLSVSFQGE FSLPISK K  
Sbjct:   103 PSLLPKRSQSVDRRRPSAVSVTVGTEMSAATKMLITSTRSLSVSFQGEAFSLPISKKKET 162

Query:   115 --------KATPETRRGTPVRDQPWPGRTQQGNPICQGCWILVLRRRLNSMRTPPRTRTK 166
                     K+TPE RR TPVRDQ      +   P+ Q  W    RR  NS    P + ++
Sbjct:   163 TSTPVSHRKSTPERRRSTPVRDQ-----RENSKPVDQQRWPGASRRG-NSESVVPNSLSR 216


>TAIR|locus:2091166 [details] [associations]
            symbol:SCO3 "AT3G19570" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0005777 "peroxisome" evidence=IDA]
            [GO:0009658 "chloroplast organization" evidence=IMP] EMBL:CP002686
            GO:GO:0005777 GO:GO:0009658 InterPro:IPR007573 Pfam:PF04484
            EMBL:BT005534 EMBL:AK118290 IPI:IPI00526193 RefSeq:NP_850614.1
            UniGene:At.38386 IntAct:Q8GXD9 PRIDE:Q8GXD9
            EnsemblPlants:AT3G19570.2 GeneID:821494 KEGG:ath:AT3G19570
            TAIR:At3g19570 InParanoid:Q8GXD9 OMA:TSKVEEM PhylomeDB:Q8GXD9
            ProtClustDB:CLSN2688614 ArrayExpress:Q8GXD9 Genevestigator:Q8GXD9
            Uniprot:Q8GXD9
        Length = 644

 Score = 193 (73.0 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 52/99 (52%), Positives = 61/99 (61%)

Query:    66 PALGTKRSQSVDRRR---------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKAKA 116
             P+   KRSQSVDRRR         ++S  T+MLITSTRSLSVSFQGE FS PISK K  A
Sbjct:   105 PSSLPKRSQSVDRRRPSAVSDTRTEMSAATKMLITSTRSLSVSFQGEAFSFPISKKKETA 164

Query:   117 TPET-RRGTPVRDQPWPGRTQQGN--PICQGCWILVLRR 152
             TP + R+ TP R +  P R Q+ N  P+ Q  W    RR
Sbjct:   165 TPVSHRKCTPERRRATPVRDQRENSKPVDQQLWPGASRR 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.131   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      174       129   0.00091  102 3  11 22  0.39    31
                                                     29  0.41    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  506 (54 KB)
  Total size of DFA:  106 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.15u 0.09s 12.24t   Elapsed:  00:00:02
  Total cpu time:  12.15u 0.09s 12.24t   Elapsed:  00:00:02
  Start:  Thu May  9 14:07:27 2013   End:  Thu May  9 14:07:29 2013

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