BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030650
(174 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224103731|ref|XP_002313172.1| predicted protein [Populus trichocarpa]
gi|222849580|gb|EEE87127.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/181 (50%), Positives = 108/181 (59%), Gaps = 55/181 (30%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQS------QRFSSLLVSRSINSS--- 63
RKP+G+ V SRYLSPSPS+S+S TT TTT S S S +RF+S L+SRS NS
Sbjct: 1 RKPRGKQVPSRYLSPSPSTSTSTTTTTTTTTSSSSSSSSSFPRRFASPLLSRSTNSGPLH 60
Query: 64 --------NLPALGTKRSQSVDRRR-----------------QLSTITRMLITSTRSLSV 98
+LP+ G+KRSQSVDRRR ++S T+MLITSTRSLSV
Sbjct: 61 TPLTTTTCSLPS-GSKRSQSVDRRRPVTSSRPTTPNPQRTATEISAATKMLITSTRSLSV 119
Query: 99 SFQGETFSLPISKTKA----------KATPETRRGTPVRDQP----------WPGRTQQG 138
SFQGE FSLPISK K+ KATPE RR TPVRDQ WPGR+++G
Sbjct: 120 SFQGEAFSLPISKAKSVTPPQNNVVRKATPERRRATPVRDQGENSRPMDQHRWPGRSREG 179
Query: 139 N 139
N
Sbjct: 180 N 180
>gi|297830622|ref|XP_002883193.1| hypothetical protein ARALYDRAFT_479470 [Arabidopsis lyrata subsp.
lyrata]
gi|297329033|gb|EFH59452.1| hypothetical protein ARALYDRAFT_479470 [Arabidopsis lyrata subsp.
lyrata]
Length = 645
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 102/163 (62%), Gaps = 37/163 (22%)
Query: 13 RKPKG-RFVSSRYLSPSPSSSSSLTTATTTAKSQSQ-----SQRFSSLLVSRSINS-SNL 65
R+P+ + V SRYLSPSPS S+ TTAT+T+ S S S+R+ S L+SRS NS SNL
Sbjct: 38 RRPRAAKNVPSRYLSPSPSHPSTTTTATSTSSSSSSAVLRTSKRYPSPLLSRSTNSASNL 97
Query: 66 ---PALGTKRSQSVDRRR---------QLSTITRMLITSTRSLSVSFQGETFSLPISKTK 113
P+ KRSQSVDRRR ++S T+MLITSTRSLSVSFQGE FSLPISK K
Sbjct: 98 VKTPSSLPKRSQSVDRRRPSAVSDTRTEMSAATKMLITSTRSLSVSFQGEAFSLPISKKK 157
Query: 114 A--------KATPETRRGTPVRD----------QPWPGRTQQG 138
K+TPE RR TPVRD Q WPG +++G
Sbjct: 158 ETTTPVSHRKSTPERRRATPVRDQRENSKPVDQQLWPGASRRG 200
>gi|255573137|ref|XP_002527498.1| conserved hypothetical protein [Ricinus communis]
gi|223533138|gb|EEF34896.1| conserved hypothetical protein [Ricinus communis]
Length = 634
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 110/204 (53%), Gaps = 69/204 (33%)
Query: 1 MVVAISEENPRT---------------------RKPKGRFVSSRYLSPSPSSSSSLTTAT 39
MV AIS +N +T RKP+G+ V SRYLSPSPSSS++ T+ T
Sbjct: 2 MVAAISTDNAKTPNNPRRPPLLPSEKDNAHVQSRKPRGKQVPSRYLSPSPSSSTTTTSTT 61
Query: 40 TTAKSQSQS-----QRFSSLLVSRSINSSNLPALGTKRSQSVDRRR-------------- 80
TT S S S +RF S L+SRS NS + P KRSQSVDR+R
Sbjct: 62 TTTSSSSCSSSSVPKRFPSPLLSRSTNSFSTP----KRSQSVDRKRPVVSQRPVTPNPEA 117
Query: 81 ------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKA---------KATPETRRGTP 125
++S TRMLITSTRSLSVSFQGE FSLPISK KA K TPE R+ TP
Sbjct: 118 KQGNVSEMSAATRMLITSTRSLSVSFQGEAFSLPISKAKAVSSSPNVTRKVTPERRKSTP 177
Query: 126 VRDQP----------WPGRTQQGN 139
VRDQ WPGR++ GN
Sbjct: 178 VRDQGENSRPLDQHRWPGRSRGGN 201
>gi|225428965|ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
Length = 639
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 95/169 (56%), Gaps = 50/169 (29%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSN----LPAL 68
++PK R VSSRY+SPSPS+S+S+ +R SS L+SRS NS+ LP
Sbjct: 47 KRPKSRQVSSRYMSPSPSTSASVP------------RRCSSPLISRSTNSTASSTPLPVA 94
Query: 69 GTK------RSQSVDRRR----------QLSTITRMLITSTRSLSVSFQGETFSLPISKT 112
+ RS SVDRRR ++S +R+L TSTRSLSVSFQGE FSLPISK
Sbjct: 95 ASSTSSSFPRSHSVDRRRPATAAPGSAGEVSAASRLLFTSTRSLSVSFQGEAFSLPISKA 154
Query: 113 KA--------KATPETRRGTPVR-----DQ-----PWPGRTQQGNPICQ 143
KA K TPE R+ TPVR DQ PWPGR++ N + +
Sbjct: 155 KAAPNLGNVRKGTPERRKPTPVRGSGAVDQVENSRPWPGRSRSVNVLAR 203
>gi|296083065|emb|CBI22469.3| unnamed protein product [Vitis vinifera]
Length = 530
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 95/169 (56%), Gaps = 50/169 (29%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSN----LPAL 68
++PK R VSSRY+SPSPS+S+S+ +R SS L+SRS NS+ LP
Sbjct: 48 KRPKSRQVSSRYMSPSPSTSASVP------------RRCSSPLISRSTNSTASSTPLPVA 95
Query: 69 GTK------RSQSVDRRR----------QLSTITRMLITSTRSLSVSFQGETFSLPISKT 112
+ RS SVDRRR ++S +R+L TSTRSLSVSFQGE FSLPISK
Sbjct: 96 ASSTSSSFPRSHSVDRRRPATAAPGSAGEVSAASRLLFTSTRSLSVSFQGEAFSLPISKA 155
Query: 113 KA--------KATPETRRGTPVR-----DQ-----PWPGRTQQGNPICQ 143
KA K TPE R+ TPVR DQ PWPGR++ N + +
Sbjct: 156 KAAPNLGNVRKGTPERRKPTPVRGSGAVDQVENSRPWPGRSRSVNVLAR 204
>gi|147797340|emb|CAN69354.1| hypothetical protein VITISV_014039 [Vitis vinifera]
Length = 601
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 99/179 (55%), Gaps = 50/179 (27%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSN----LPAL 68
++PK R VSSRY+SPSPS+S+S+ +R SS L+SRS NS+ LP
Sbjct: 47 KRPKSRQVSSRYMSPSPSTSASVP------------RRCSSPLISRSTNSTASSTPLPVA 94
Query: 69 GTK------RSQSVDRRR----------QLSTITRMLITSTRSLSVSFQGETFSLPISKT 112
+ RS SVDRRR ++S +R+L TSTRSLSVSFQGE FSLPISK
Sbjct: 95 ASSTSSSFPRSHSVDRRRPATAAPGSAGEVSAASRLLFTSTRSLSVSFQGEAFSLPISKA 154
Query: 113 KA--------KATPETRRGTPVR-----DQ-----PWPGRTQQGNPICQGCWILVLRRR 153
KA K TPE R+ TPVR DQ PWPGR++ N + + V R++
Sbjct: 155 KAAPNLGNVRKGTPERRKPTPVRGSGAVDQVENSRPWPGRSRSVNVLARSFDCSVDRKK 213
>gi|224056236|ref|XP_002298769.1| predicted protein [Populus trichocarpa]
gi|222846027|gb|EEE83574.1| predicted protein [Populus trichocarpa]
Length = 651
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 107/178 (60%), Gaps = 50/178 (28%)
Query: 12 TRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQS----QRFSSLLVSRSINS--SNL 65
TRKP+G+ V SRYLSPSPS+S++ TT TTT+ S S S +R S L+SRS NS S+
Sbjct: 46 TRKPRGKQVPSRYLSPSPSTSTTTTTTTTTSSSSSSSSSFPKRLPSPLLSRSTNSGTSHT 105
Query: 66 PAL--------GTKRSQSVDRRR----------------QLSTITRMLITSTRSLSVSFQ 101
P+ G+KRSQSVDRRR ++S T+MLITSTRSLSVSFQ
Sbjct: 106 PSTTTASPFLSGSKRSQSVDRRRPVTSSRETTPNPQGNAEMSAATKMLITSTRSLSVSFQ 165
Query: 102 GETFSLPISKTKA----------KATPETRRGTPVRDQP----------WPGRTQQGN 139
GE FSLPISK K+ KATPE RR TPV DQ WPGR+++GN
Sbjct: 166 GEAFSLPISKAKSVTPPQNNVARKATPEKRRATPVGDQGENSRPVDHHRWPGRSREGN 223
>gi|356574305|ref|XP_003555289.1| PREDICTED: uncharacterized protein LOC100815206 [Glycine max]
Length = 625
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 106/178 (59%), Gaps = 38/178 (21%)
Query: 1 MVVAISEENPRT-------RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQS----- 48
MV AISE+ P T R+PKGR VSSRY+S SPS S S ++ TTT S S S
Sbjct: 1 MVAAISED-PLTSSNGTIPRRPKGRQVSSRYMSHSPSPSPSPSSTTTTTTSTSTSTTTSS 59
Query: 49 -QRFSSLLVSRSINSSNLPALGTKRSQSVDRRRQ-----LSTITRMLITSTRSLSVSFQG 102
+RF S L+S S NSS L KRSQSVDRRR L ++L+TSTRSLSVSFQG
Sbjct: 60 SRRFPSPLLSHSSNSST--PLVPKRSQSVDRRRPRPATPLPEAAKLLVTSTRSLSVSFQG 117
Query: 103 ETFSLPISKTKA---------KATPETRRGTPVR-------DQP-WPGRTQQGNPICQ 143
E FSLP+SKTKA ATPE RR TPV+ DQ WP RT++ + + +
Sbjct: 118 EAFSLPVSKTKAAAATPPPRKAATPERRRATPVKGENSRPVDQHRWPARTRRVDHLSK 175
>gi|356536117|ref|XP_003536586.1| PREDICTED: uncharacterized protein LOC100808920 [Glycine max]
Length = 613
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 108/185 (58%), Gaps = 42/185 (22%)
Query: 1 MVVAISEENPRT-------RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSS 53
MV AISE+ P T R+PKGR VSSRY+S SPS SS+ TT TTT+ S S S SS
Sbjct: 1 MVAAISED-PLTSSNGTIPRRPKGRQVSSRYMSHSPSPSSTTTTTTTTSTSTSTSTTSSS 59
Query: 54 L------LVSRSINSSN--LPALGTKRSQSVDRRRQ-----LSTITRMLITSTRSLSVSF 100
L+S S NSS LP KRSQSVDRRR L ++L+TSTRSLSVSF
Sbjct: 60 SRRFPSPLLSHSTNSSTPLLP----KRSQSVDRRRPRPATPLPEAAKLLVTSTRSLSVSF 115
Query: 101 QGETFSLPISKTKA---------KATPETRRGTPVR-------DQP-WPGRTQQGNPICQ 143
QGE FSLP+SKTKA ATPE RR TPV+ DQ WP RT+ + + +
Sbjct: 116 QGEAFSLPVSKTKAASATPTPRKAATPERRRATPVKGENSRPADQHRWPARTRHVDHLSK 175
Query: 144 GCWIL 148
I+
Sbjct: 176 SVDII 180
>gi|449438327|ref|XP_004136940.1| PREDICTED: uncharacterized protein LOC101215899 [Cucumis sativus]
Length = 667
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 100/192 (52%), Gaps = 63/192 (32%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSIN----SSNLPAL 68
RKP+GR V SRY+S S S+ T+ ++T S + S+RF S L+SRS N S+ LP+
Sbjct: 51 RKPRGRQVPSRYMS---PSPSTSTSTSSTTSSSASSRRFPSPLLSRSTNLTPASTPLPSS 107
Query: 69 GTKRSQSVDRRR-------------------QLSTITRMLITSTRSLSVSFQGETFSLPI 109
G KRSQSVDRRR S ++L+TSTRSLSVSFQGE FSLPI
Sbjct: 108 GPKRSQSVDRRRTTTPRSITPVLDSRHGNATDSSAAAKLLVTSTRSLSVSFQGEAFSLPI 167
Query: 110 SKTKAKA-----------TPETRRGTPVRDQP-----------------WPGRTQ----Q 137
SKTKA A TPE RR TP+RD+ WP R + +
Sbjct: 168 SKTKATATPSLSNARKGSTPERRRATPLRDKSDGSGVQVENSKLLDQHRWPARNRHANLE 227
Query: 138 GNPI-----CQG 144
GNP+ C G
Sbjct: 228 GNPLSRSFDCGG 239
>gi|449528385|ref|XP_004171185.1| PREDICTED: uncharacterized LOC101215899 [Cucumis sativus]
Length = 514
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 100/192 (52%), Gaps = 63/192 (32%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSIN----SSNLPAL 68
RKP+GR V SRY+S S S+ T+ ++T S + S+RF S L+SRS N S+ LP+
Sbjct: 51 RKPRGRQVPSRYMS---PSPSTSTSTSSTTSSSASSRRFPSPLLSRSTNLTPASTPLPSS 107
Query: 69 GTKRSQSVDRRR-------------------QLSTITRMLITSTRSLSVSFQGETFSLPI 109
G KRSQSVDRRR S ++L+TSTRSLSVSFQGE FSLPI
Sbjct: 108 GPKRSQSVDRRRTTTPRSITPVLDSRHGNATDSSAAAKLLVTSTRSLSVSFQGEAFSLPI 167
Query: 110 SKTKAKA-----------TPETRRGTPVRDQP-----------------WPGRTQ----Q 137
SKTKA A TPE RR TP+RD+ WP R + +
Sbjct: 168 SKTKATATPSLSNARKGSTPERRRATPLRDKSDGSGVQVENSKLLDQHRWPARNRHANLE 227
Query: 138 GNPI-----CQG 144
GNP+ C G
Sbjct: 228 GNPLSRSFDCGG 239
>gi|12323592|gb|AAG51768.1|AC079674_1 unknown protein; 38618-41990 [Arabidopsis thaliana]
Length = 718
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 79/148 (53%), Gaps = 49/148 (33%)
Query: 21 SSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPALGTKRSQSVDRRR 80
S RY SPSP L+ +TT + S NS P+L KRSQSVDRRR
Sbjct: 78 SKRYPSPSPL----LSRSTTNSAS----------------NSIKTPSLLPKRSQSVDRRR 117
Query: 81 ----------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKA---------KATPETR 121
++S T+MLITSTRSLSVSFQGE FSLPISK K K+TPE R
Sbjct: 118 PSAVSVTVGTEMSAATKMLITSTRSLSVSFQGEAFSLPISKKKETTSTPVSHRKSTPERR 177
Query: 122 RGTPVRD----------QPWPGRTQQGN 139
R TPVRD Q WPG +++GN
Sbjct: 178 RSTPVRDQRENSKPVDQQRWPGASRRGN 205
>gi|12597857|gb|AAG60167.1|AC074110_5 hypothetical protein [Arabidopsis thaliana]
Length = 722
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 79/148 (53%), Gaps = 49/148 (33%)
Query: 21 SSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPALGTKRSQSVDRRR 80
S RY SPSP L+ +TT + S NS P+L KRSQSVDRRR
Sbjct: 78 SKRYPSPSPL----LSRSTTNSAS----------------NSIKTPSLLPKRSQSVDRRR 117
Query: 81 ----------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKA---------KATPETR 121
++S T+MLITSTRSLSVSFQGE FSLPISK K K+TPE R
Sbjct: 118 PSAVSVTVGTEMSAATKMLITSTRSLSVSFQGEAFSLPISKKKETTSTPVSHRKSTPERR 177
Query: 122 RGTPVRD----------QPWPGRTQQGN 139
R TPVRD Q WPG +++GN
Sbjct: 178 RSTPVRDQRENSKPVDQQRWPGASRRGN 205
>gi|297847318|ref|XP_002891540.1| hypothetical protein ARALYDRAFT_891910 [Arabidopsis lyrata subsp.
lyrata]
gi|297337382|gb|EFH67799.1| hypothetical protein ARALYDRAFT_891910 [Arabidopsis lyrata subsp.
lyrata]
Length = 660
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 100/180 (55%), Gaps = 48/180 (26%)
Query: 8 ENPRTRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQ------------SQRFSSL- 54
N R+P+G+ V SRYLSPSPS S S T TTT + S S+R+ S
Sbjct: 27 NNGGQRRPRGKQVPSRYLSPSPSHSVSSNTTTTTTTTTSSSSSSSSSAILRTSKRYPSPS 86
Query: 55 -LVSRSI-----NSSNLPALGTKRSQSVDRRR----------QLSTITRMLITSTRSLSV 98
L+SRS NS P+L KRSQSVDRRR ++S T+MLITSTRSLSV
Sbjct: 87 PLLSRSTTNSASNSIKTPSLLPKRSQSVDRRRPSAVPVTVGSEMSAATKMLITSTRSLSV 146
Query: 99 SFQGETFSLPISKTKA---------KATPETRRGTPVRD----------QPWPGRTQQGN 139
SFQGE FSLPISK K K+TPE RR TPVRD Q WPG +++GN
Sbjct: 147 SFQGEAFSLPISKKKEATTTPVSHRKSTPERRRSTPVRDQRENSKPVDQQRWPGASRRGN 206
>gi|18402829|ref|NP_564558.1| uncharacterized protein [Arabidopsis thaliana]
gi|15028145|gb|AAK76696.1| unknown protein [Arabidopsis thaliana]
gi|24030506|gb|AAN41399.1| unknown protein [Arabidopsis thaliana]
gi|332194367|gb|AEE32488.1| uncharacterized protein [Arabidopsis thaliana]
Length = 659
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 79/148 (53%), Gaps = 49/148 (33%)
Query: 21 SSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPALGTKRSQSVDRRR 80
S RY SPSP L+ +TT + S NS P+L KRSQSVDRRR
Sbjct: 78 SKRYPSPSPL----LSRSTTNSAS----------------NSIKTPSLLPKRSQSVDRRR 117
Query: 81 ----------QLSTITRMLITSTRSLSVSFQGETFSLPISKTKA---------KATPETR 121
++S T+MLITSTRSLSVSFQGE FSLPISK K K+TPE R
Sbjct: 118 PSAVSVTVGTEMSAATKMLITSTRSLSVSFQGEAFSLPISKKKETTSTPVSHRKSTPERR 177
Query: 122 RGTPVRD----------QPWPGRTQQGN 139
R TPVRD Q WPG +++GN
Sbjct: 178 RSTPVRDQRENSKPVDQQRWPGASRRGN 205
>gi|30685396|ref|NP_850614.1| uncharacterized protein [Arabidopsis thaliana]
gi|26451622|dbj|BAC42908.1| unknown protein [Arabidopsis thaliana]
gi|28973259|gb|AAO63954.1| unknown protein [Arabidopsis thaliana]
gi|332642739|gb|AEE76260.1| uncharacterized protein [Arabidopsis thaliana]
Length = 644
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 73/121 (60%), Gaps = 31/121 (25%)
Query: 49 QRFSSLLVSRSINS-SNL---PALGTKRSQSVDRRR---------QLSTITRMLITSTRS 95
+R+ S L+SR+ NS SNL P+ KRSQSVDRRR ++S T+MLITSTRS
Sbjct: 84 KRYPSPLLSRTTNSASNLVYTPSSLPKRSQSVDRRRPSAVSDTRTEMSAATKMLITSTRS 143
Query: 96 LSVSFQGETFSLPISKTKA--------KATPETRRGTPVRD----------QPWPGRTQQ 137
LSVSFQGE FS PISK K K TPE RR TPVRD Q WPG +++
Sbjct: 144 LSVSFQGEAFSFPISKKKETATPVSHRKCTPERRRATPVRDQRENSKPVDQQLWPGASRR 203
Query: 138 G 138
G
Sbjct: 204 G 204
>gi|30685390|ref|NP_188591.2| uncharacterized protein [Arabidopsis thaliana]
gi|332642738|gb|AEE76259.1| uncharacterized protein [Arabidopsis thaliana]
Length = 627
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 73/121 (60%), Gaps = 31/121 (25%)
Query: 49 QRFSSLLVSRSINS-SNL---PALGTKRSQSVDRRR---------QLSTITRMLITSTRS 95
+R+ S L+SR+ NS SNL P+ KRSQSVDRRR ++S T+MLITSTRS
Sbjct: 84 KRYPSPLLSRTTNSASNLVYTPSSLPKRSQSVDRRRPSAVSDTRTEMSAATKMLITSTRS 143
Query: 96 LSVSFQGETFSLPISKTKA--------KATPETRRGTPVRD----------QPWPGRTQQ 137
LSVSFQGE FS PISK K K TPE RR TPVRD Q WPG +++
Sbjct: 144 LSVSFQGEAFSFPISKKKETATPVSHRKCTPERRRATPVRDQRENSKPVDQQLWPGASRR 203
Query: 138 G 138
G
Sbjct: 204 G 204
>gi|9294421|dbj|BAB02541.1| unnamed protein product [Arabidopsis thaliana]
Length = 701
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 73/121 (60%), Gaps = 31/121 (25%)
Query: 49 QRFSSLLVSRSINS-SNL---PALGTKRSQSVDRRR---------QLSTITRMLITSTRS 95
+R+ S L+SR+ NS SNL P+ KRSQSVDRRR ++S T+MLITSTRS
Sbjct: 84 KRYPSPLLSRTTNSASNLVYTPSSLPKRSQSVDRRRPSAVSDTRTEMSAATKMLITSTRS 143
Query: 96 LSVSFQGETFSLPISKTKA--------KATPETRRGTPVRD----------QPWPGRTQQ 137
LSVSFQGE FS PISK K K TPE RR TPVRD Q WPG +++
Sbjct: 144 LSVSFQGEAFSFPISKKKETATPVSHRKCTPERRRATPVRDQRENSKPVDQQLWPGASRR 203
Query: 138 G 138
G
Sbjct: 204 G 204
>gi|302142213|emb|CBI19416.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 98/167 (58%), Gaps = 45/167 (26%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNL------P 66
R+PKGR V+SRYLS SS+ T+ +++ S S S+R +S LVSR+ +SS + P
Sbjct: 41 RRPKGREVTSRYLS-----SSTSTSTSSSTSSSSSSRRCASPLVSRTASSSAVMTPMPAP 95
Query: 67 ALGTKRSQSVDRRR-----------------QLSTITRMLITSTRSLSVSFQGETFSLPI 109
+ KRSQSV+RRR +++T ++MLITS RSLSVSFQGE+FSL +
Sbjct: 96 SSLIKRSQSVERRRPVTPRPNTFDFRPGNAGEVTTASKMLITSARSLSVSFQGESFSLRV 155
Query: 110 SKTKA------KATPETRRGTPVR----------DQP-WPGRTQQGN 139
SKTK K TPE R+ TP R DQ WPGR++Q N
Sbjct: 156 SKTKPAPASVRKGTPERRKPTPTRADQTENSKPVDQHRWPGRSRQVN 202
>gi|225458810|ref|XP_002283295.1| PREDICTED: uncharacterized protein LOC100242050 [Vitis vinifera]
Length = 743
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/167 (44%), Positives = 98/167 (58%), Gaps = 45/167 (26%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNL------P 66
R+PKGR V+SRYLS SS+ T+ +++ S S S+R +S LVSR+ +SS + P
Sbjct: 141 RRPKGREVTSRYLS-----SSTSTSTSSSTSSSSSSRRCASPLVSRTASSSAVMTPMPAP 195
Query: 67 ALGTKRSQSVDRRR-----------------QLSTITRMLITSTRSLSVSFQGETFSLPI 109
+ KRSQSV+RRR +++T ++MLITS RSLSVSFQGE+FSL +
Sbjct: 196 SSLIKRSQSVERRRPVTPRPNTFDFRPGNAGEVTTASKMLITSARSLSVSFQGESFSLRV 255
Query: 110 SKTKA------KATPETRRGTPVR----------DQP-WPGRTQQGN 139
SKTK K TPE R+ TP R DQ WPGR++Q N
Sbjct: 256 SKTKPAPASVRKGTPERRKPTPTRADQTENSKPVDQHRWPGRSRQVN 302
>gi|357437643|ref|XP_003589097.1| hypothetical protein MTR_1g018440 [Medicago truncatula]
gi|355478145|gb|AES59348.1| hypothetical protein MTR_1g018440 [Medicago truncatula]
Length = 621
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 30/140 (21%)
Query: 8 ENPRTRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINS----- 62
+N RKPK R V+SRY+ ++++++ S +R +S LV+R++NS
Sbjct: 31 DNAIVRKPKAREVTSRYM----------YSSSSSSSFSSPPRRTNSPLVNRTVNSTKQKS 80
Query: 63 --SNLPALGTKRSQSVDRRRQLSTITR----------MLITSTRSLSVSFQGETFSLPIS 110
S PA KRSQS +R+RQ R ML TS RSLSVSFQGE+FS+P+S
Sbjct: 81 TPSVTPAAFVKRSQSTERQRQRQGTPRPNGETPVAQKMLFTSARSLSVSFQGESFSIPVS 140
Query: 111 KTK---AKATPETRRGTPVR 127
K K A T RR TP R
Sbjct: 141 KAKPPSATVTQSLRRSTPER 160
>gi|255538090|ref|XP_002510110.1| conserved hypothetical protein [Ricinus communis]
gi|223550811|gb|EEF52297.1| conserved hypothetical protein [Ricinus communis]
Length = 629
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 61/120 (50%), Gaps = 36/120 (30%)
Query: 71 KRSQSVDRRR------------------QLSTITRMLITSTRSLSVSFQGETFSLPISKT 112
KRS SV+RRR ++S +MLITSTRSLSVSFQGE+F+L +SK
Sbjct: 88 KRSLSVERRRPNTPRLNSTDLRINGNGTEVSNTHKMLITSTRSLSVSFQGESFALQVSKA 147
Query: 113 KA-------KATPETRRGTPV----RDQ-------PWPGRTQQGNPICQGCWILVLRRRL 154
K K TPE R+ TP DQ PWPGR ++ N + + RRRL
Sbjct: 148 KPAAPSPIRKGTPERRKATPTPGRGTDQVENNNSRPWPGRFREPNSLTRSVDCTDDRRRL 207
>gi|449523644|ref|XP_004168833.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101221628
[Cucumis sativus]
Length = 628
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 75/173 (43%), Gaps = 49/173 (28%)
Query: 7 EENPRTRKPKGRFVSSRYLS----------------PSPSSSSSLTTATTTAKSQSQSQR 50
+ R+PK R V+SRYLS PSPS S ++T+TT S R
Sbjct: 37 DHGAAARRPKSREVTSRYLSSSSSSSSSSASVLRRCPSPSVSG-ISTSTTVLTPMPSSFR 95
Query: 51 FSSLLVSRSINSSNLPALGTKRSQSVD-------RRRQLSTITRMLITSTRSLSVSFQGE 103
S S P GT S+D R ++S ++L STRSLSVSFQGE
Sbjct: 96 RS--------ESVERPHRGTPHPNSLDFRFGHGNGRGEMSAAQKLLFNSTRSLSVSFQGE 147
Query: 104 TFSLPISKTKAKATPETRRGT-----------------PVRDQPWPGRTQQGN 139
+F L +SK+K TP R+GT PV Q W G +Q N
Sbjct: 148 SFPLQVSKSKPAPTPGVRKGTPRGTGGSAGADQTENMKPVDQQRWQGSHRQAN 200
>gi|449450550|ref|XP_004143025.1| PREDICTED: uncharacterized protein LOC101221628 [Cucumis sativus]
Length = 628
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 7 EENPRTRKPKGRFVSSRYLS----------------PSPSSSSSLTTATTTAKSQSQSQR 50
+ R+PK R V+SRYLS PSPS S ++T+TT S R
Sbjct: 37 DHGAAARRPKSREVTSRYLSSSSSSSSSSASVLRRCPSPSVSG-ISTSTTVLTPMPSSFR 95
Query: 51 FSSLLVSRSINSSNLPALGTKRSQSVD-------RRRQLSTITRMLITSTRSLSVSFQGE 103
S S P GT S+D R ++S ++L STRSLSVSFQGE
Sbjct: 96 RS--------ESVERPHRGTPHPNSLDFRFGHGNGRGEMSAAQKLLFNSTRSLSVSFQGE 147
Query: 104 TFSLPISKTKAKATPETRRGTPVRDQPWPGRTQQGN--PICQGCW 146
+F L +SK+K TP R+GTP G Q N P+ Q W
Sbjct: 148 SFPLQVSKSKPAPTPGVRKGTPRGTGGSAGADQTENMKPVDQQRW 192
>gi|224067214|ref|XP_002302412.1| predicted protein [Populus trichocarpa]
gi|222844138|gb|EEE81685.1| predicted protein [Populus trichocarpa]
Length = 741
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 83/177 (46%), Gaps = 60/177 (33%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSR-SINSSNLPALGTK 71
R+PK R VSSRY+S + +A + S S+R +S +SR + S+ A K
Sbjct: 42 RRPKSREVSSRYMS------------SASASTTSTSRRCASPSISRRTATSTTSAASTIK 89
Query: 72 RSQSVDRRR------------------------QLSTITRMLITSTRSLSVSFQGETFSL 107
RSQSV+RRR +++ RMLITSTR LSVSFQGE+FS
Sbjct: 90 RSQSVERRRPATPRTNSLDLRIGNTNCGVVDSGEMTNAQRMLITSTRRLSVSFQGESFSF 149
Query: 108 PISKTKA--------KATPETRRGT---------------PVRDQPWPGRTQQGNPI 141
++K K K TPE R+ T P+ WPGR +Q NP+
Sbjct: 150 QLNKAKPAPSPISVRKGTPERRKATTTIQTRRADQVENSGPIEQHRWPGRFRQPNPM 206
>gi|449447287|ref|XP_004141400.1| PREDICTED: uncharacterized protein LOC101208707 [Cucumis sativus]
gi|449508211|ref|XP_004163251.1| PREDICTED: uncharacterized protein LOC101226455 [Cucumis sativus]
Length = 639
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 92/191 (48%), Gaps = 58/191 (30%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSL--LVSRSINSSNLPALGT 70
RKPK R V+SR++ PS SSSS L T +++ S S++ ++ + S+N
Sbjct: 47 RKPKSREVTSRFMPPSNSSSSPLLTKRSSSPSLSRTSSLAATPTQAASSLN--------- 97
Query: 71 KRSQSVDRRR---------------------QLSTITRMLITSTRSLSVSFQGETFSLPI 109
KRS SVDRRR ++ ++L+TSTRSLSVSFQGE+FSL +
Sbjct: 98 KRSTSVDRRRVGTPRPYSLDFRTGFDNGGLGEMPASQKLLLTSTRSLSVSFQGESFSLQV 157
Query: 110 SKTKAKATPETRRGTPVR-----------------------DQP-WPGRTQQGNPICQ-- 143
SK K +P R+GTP R DQ WP R +Q N + +
Sbjct: 158 SKAKPAPSPGARKGTPERRKSTTPARGGGVADKAENSKLIVDQHRWPARLRQENLMTRSL 217
Query: 144 GCWILVLRRRL 154
C + RRR+
Sbjct: 218 DCEDMAERRRV 228
>gi|356553992|ref|XP_003545334.1| PREDICTED: uncharacterized protein LOC100795915 [Glycine max]
Length = 615
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 26/133 (19%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSN-------- 64
R+PK R V+SRY+S S SSSSS+++ +S L+V+R++NS+
Sbjct: 37 RRPKAREVTSRYMSSSSSSSSSVSSPPRRCQS--------PLVVTRTLNSAKPKQTPTPT 88
Query: 65 -LPALGTKRSQSVDRRRQLS---------TITRMLITSTRSLSVSFQGETFSLPISKTKA 114
P KRSQSV+RRRQ + +ML TSTRSLSVSFQGE+F + + TK
Sbjct: 89 PTPTPFAKRSQSVERRRQATPRPNGTEAPAAQKMLFTSTRSLSVSFQGESFPIQVRTTKP 148
Query: 115 KATPETRRGTPVR 127
++ R+ TP R
Sbjct: 149 PSSHSLRKSTPER 161
>gi|224129890|ref|XP_002320696.1| predicted protein [Populus trichocarpa]
gi|222861469|gb|EEE99011.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 44/82 (53%), Gaps = 23/82 (28%)
Query: 81 QLSTITRMLITSTRSLSVSFQGETFSLPISKTKAKATP-ETRRGTPVR------------ 127
+++ RMLITSTR LSVSFQGE+FS +SK K ++P R+GTP R
Sbjct: 62 EITNAQRMLITSTRRLSVSFQGESFSFQVSKAKPTSSPSAVRKGTPERRKATTPIPTRGA 121
Query: 128 DQP----------WPGRTQQGN 139
DQ WPGR +Q N
Sbjct: 122 DQAENSRTMEQRRWPGRLRQQN 143
>gi|356562245|ref|XP_003549382.1| PREDICTED: uncharacterized protein LOC100782524 [Glycine max]
Length = 618
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 33/135 (24%)
Query: 13 RKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSN-------- 64
R+PK R V+SRY+S S SSSSS+++ +S L+V+R++NS+
Sbjct: 37 RRPKAREVTSRYMSSSSSSSSSVSSPPRRCQS--------PLVVTRTVNSAKTKQTPTPT 88
Query: 65 -LPALGTKRSQSVDRRRQLS--------TITRMLITSTRSLSVSFQGETFSLPISKTKA- 114
P KRSQS +RRRQ + ++L TSTRSLSVSFQGE+F + + TK
Sbjct: 89 PTPTPFAKRSQSAERRRQGTPRPTTEAPAAQKVLFTSTRSLSVSFQGESFPIQVRTTKPP 148
Query: 115 -------KATPETRR 122
K+TPE R+
Sbjct: 149 PPSQSFRKSTPERRK 163
>gi|356518126|ref|XP_003527733.1| PREDICTED: uncharacterized protein LOC100797671 [Glycine max]
Length = 374
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%), Gaps = 5/48 (10%)
Query: 71 KRSQSVDRRRQLSTIT---RMLITS--TRSLSVSFQGETFSLPISKTK 113
KRSQS++RRR +T + +ML+TS TRSLSVSFQGE+F + ++K K
Sbjct: 32 KRSQSLERRRPGTTASSSGKMLLTSTTTRSLSVSFQGESFRITVNKAK 79
>gi|9757843|dbj|BAB08280.1| unnamed protein product [Arabidopsis thaliana]
Length = 445
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 19/100 (19%)
Query: 12 TRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPALGTK 71
R+PK R V+SRYL T++ QS +R S +V+R + S ++ T
Sbjct: 31 NRRPKTRDVASRYLG-----------GTSSFFHQSSPKRCQSPIVTRPVTPS---SVATN 76
Query: 72 RSQSVDRR-----RQLSTITRMLITSTRSLSVSFQGETFS 106
R QS RR R++S RML+TS RSL SFQ ++F+
Sbjct: 77 RPQSTPRRESLDRREVSKAERMLLTSGRSLFASFQADSFT 116
>gi|102139850|gb|ABF70008.1| hypothetical protein MA4_8L21.22 [Musa acuminata]
Length = 643
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 41/76 (53%), Gaps = 25/76 (32%)
Query: 71 KRSQSVDRRR--------------QLSTITRMLITSTRSLSVSFQGETFSL--------- 107
RS+SVDR R LS++ R L T+TRSLSVSFQGE+FS
Sbjct: 162 NRSKSVDRARPGSTATPRAAHNPAALSSVARALRTTTRSLSVSFQGESFSYQSSKIGPTS 221
Query: 108 PISKTKAKATPETRRG 123
P SK + K TPE RRG
Sbjct: 222 PSSKNR-KPTPE-RRG 235
>gi|297795127|ref|XP_002865448.1| hypothetical protein ARALYDRAFT_494689 [Arabidopsis lyrata subsp.
lyrata]
gi|297311283|gb|EFH41707.1| hypothetical protein ARALYDRAFT_494689 [Arabidopsis lyrata subsp.
lyrata]
Length = 549
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 18/116 (15%)
Query: 12 TRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPALGTK 71
R+PK R V+SRYL +SSL QS +R S V+R + ++N P T
Sbjct: 30 NRRPKTRDVASRYLG----GASSLF-------HQSSPKRCQSPTVTRPV-ATNRPK-STP 76
Query: 72 RSQSVDRRRQLSTITRMLITSTRSLSVSFQGETFSLPISKTKAKATPETRRGTPVR 127
R +S+DR ++S RML+TS RSL SFQ ++F+ ++++ ++P TPVR
Sbjct: 77 RRESLDRG-EVSKAQRMLLTSGRSLFASFQADSFTGNENRSQLISSPI----TPVR 127
>gi|359484898|ref|XP_002276573.2| PREDICTED: uncharacterized protein LOC100253614 [Vitis vinifera]
Length = 641
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 45/133 (33%)
Query: 9 NPRTRKPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSINSSNLPA- 67
N TR+PK R VSSRY + T + S +R S ++R++ +PA
Sbjct: 33 NGVTRRPKTREVSSRY------------KSPTPPSTPSGPRRCGSPNLTRTVP---VPAQ 77
Query: 68 LGTKRSQSVDRRRQL-------------STITRMLITS----------------TRSLSV 98
L +KR+QS DR+R T M +S RSLSV
Sbjct: 78 LVSKRAQSADRKRPPTPPSPPSPSTPARDLTTDMHFSSRRMMSGRLQESLWPSTMRSLSV 137
Query: 99 SFQGETFSLPISK 111
SFQ +TFSLPI K
Sbjct: 138 SFQSDTFSLPIGK 150
>gi|414872979|tpg|DAA51536.1| TPA: putative DUF566 domain containing family protein [Zea mays]
Length = 613
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 16/121 (13%)
Query: 14 KPKGRFVSSRYLSPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSIN--SSNLPALGTK 71
KPK + VSSRYL+P S+SS T+ +T+ + + S +S S +S LP +
Sbjct: 47 KPKAKVVSSRYLAPFSRSTSSSTSTSTSTTTTTSSSNSTSTSSSTPSRRFASPLP----R 102
Query: 72 RSQSVDRRRQLSTITRML----------ITSTRSLSVSFQGETFSLPISKTKAKATPETR 121
RS SVDR R + T+TRSLSV+FQG +FS SK K +P
Sbjct: 103 RSVSVDRPRPAPAGNAAVGETGGPKAGTTTTTRSLSVAFQGRSFSFETSKAKPATSPSPS 162
Query: 122 R 122
R
Sbjct: 163 R 163
>gi|242038021|ref|XP_002466405.1| hypothetical protein SORBIDRAFT_01g007200 [Sorghum bicolor]
gi|241920259|gb|EER93403.1| hypothetical protein SORBIDRAFT_01g007200 [Sorghum bicolor]
Length = 657
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 64/122 (52%), Gaps = 17/122 (13%)
Query: 14 KPKGRFVSSRYL-------------SPSPSSSSSLTTATTTAKSQSQSQRFSSLLVSRSI 60
KPK + VSSRYL S S S++++ ++ +T+ + + S+RF+S L RS+
Sbjct: 184 KPKAKVVSSRYLTPSSKSTSTSTSTSTSTSTTTTSSSNSTSTSASTPSRRFASPLPRRSV 243
Query: 61 NSSNLPALGTKRSQSVDRRRQLSTITRMLITSTRSLSVSFQGETFSLPISKTKAKATPET 120
S + P G + +V + T T+TRSLSV+FQG +FS SK K +P
Sbjct: 244 -SVDRPRPGPAGNAAVGETGGPNAGT---TTTTRSLSVAFQGRSFSFETSKAKPATSPSP 299
Query: 121 RR 122
R
Sbjct: 300 SR 301
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.123 0.344
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,331,215,460
Number of Sequences: 23463169
Number of extensions: 82231120
Number of successful extensions: 371449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 930
Number of HSP's that attempted gapping in prelim test: 363912
Number of HSP's gapped (non-prelim): 7052
length of query: 174
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 42
effective length of database: 9,262,057,059
effective search space: 389006396478
effective search space used: 389006396478
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 71 (32.0 bits)