Query 030650
Match_columns 174
No_of_seqs 49 out of 51
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 03:22:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030650.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030650hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1jq5a_ e.22.1.2 (A:) Glycerol 18.2 19 0.0014 27.7 1.2 19 155-173 335-353 (366)
2 d1rrma_ e.22.1.2 (A:) Lactalde 17.5 24 0.0017 27.5 1.7 19 155-173 360-378 (385)
3 d1o2da_ e.22.1.2 (A:) Alcohol 9.9 55 0.004 25.2 1.7 18 156-173 336-353 (359)
4 d1kq3a_ e.22.1.2 (A:) Glycerol 8.3 67 0.0049 24.2 1.6 18 156-173 334-351 (364)
5 d1xbla_ a.2.3.1 (A:) DnaJ chap 7.6 79 0.0058 19.4 1.5 13 161-173 12-24 (75)
6 d2hg7a1 d.186.2.1 (A:1-60) Pha 7.4 67 0.0049 20.6 1.0 10 164-173 41-50 (60)
7 d1k8ke_ a.148.1.1 (E:) Arp2/3 6.2 69 0.005 24.1 0.7 21 154-174 112-132 (174)
8 d2diga1 b.34.9.1 (A:8-62) Lami 4.6 90 0.0065 19.7 0.3 6 130-135 15-20 (55)
9 d1oj7a_ e.22.1.2 (A:) Hypothet 4.3 2.6E+02 0.019 21.4 3.0 23 151-173 362-386 (390)
10 d1wjza_ a.2.3.1 (A:) CSL-type 4.2 1.7E+02 0.012 18.6 1.5 13 161-173 25-37 (94)
No 1
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=18.25 E-value=19 Score=27.74 Aligned_cols=19 Identities=11% Similarity=0.095 Sum_probs=16.5
Q ss_pred hhcCCCCCcCcHHHHHhhc
Q 030650 155 NSMRTPPRTRTKEELKEAY 173 (174)
Q Consensus 155 nsm~~~~~~~~~~~~~~~~ 173 (174)
..|.+||+.-|+|+++|+|
T Consensus 335 ~~~~~nP~~~t~edi~~il 353 (366)
T d1jq5a_ 335 GETIHNAFNVTADDVADAI 353 (366)
T ss_dssp TCGGGGTCCCCHHHHHHHH
T ss_pred CcccCCCCCCCHHHHHHHH
Confidence 4678899999999999876
No 2
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=17.50 E-value=24 Score=27.45 Aligned_cols=19 Identities=32% Similarity=0.420 Sum_probs=16.3
Q ss_pred hhcCCCCCcCcHHHHHhhc
Q 030650 155 NSMRTPPRTRTKEELKEAY 173 (174)
Q Consensus 155 nsm~~~~~~~~~~~~~~~~ 173 (174)
..|.+||+.-++||+++.|
T Consensus 360 ~~~~~nP~~~t~~di~~il 378 (385)
T d1rrma_ 360 VCTGGNPREATLEDIVELY 378 (385)
T ss_dssp GGGGGCSSCCCHHHHHHHH
T ss_pred ccccCCCccCCHHHHHHHH
Confidence 3688899999999998876
No 3
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=9.86 E-value=55 Score=25.19 Aligned_cols=18 Identities=28% Similarity=0.591 Sum_probs=15.6
Q ss_pred hcCCCCCcCcHHHHHhhc
Q 030650 156 SMRTPPRTRTKEELKEAY 173 (174)
Q Consensus 156 sm~~~~~~~~~~~~~~~~ 173 (174)
.|.+||+.-|+||+++.|
T Consensus 336 ~~~~np~~~t~e~i~~il 353 (359)
T d1o2da_ 336 HLKNTPGTFTPEKIRNIY 353 (359)
T ss_dssp GGGGSSSCCCHHHHHHHH
T ss_pred hhcCCCccCCHHHHHHHH
Confidence 478899999999998876
No 4
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=8.28 E-value=67 Score=24.25 Aligned_cols=18 Identities=17% Similarity=0.285 Sum_probs=15.2
Q ss_pred hcCCCCCcCcHHHHHhhc
Q 030650 156 SMRTPPRTRTKEELKEAY 173 (174)
Q Consensus 156 sm~~~~~~~~~~~~~~~~ 173 (174)
.+.+||+.-|+|++.++|
T Consensus 334 ~~~~~P~~~t~edi~~il 351 (364)
T d1kq3a_ 334 TIHNEPQPVTSKDVFFAL 351 (364)
T ss_dssp GGGGSSSCCCHHHHHHHH
T ss_pred cccCCCcCCCHHHHHHHH
Confidence 367789999999998876
No 5
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=7.60 E-value=79 Score=19.37 Aligned_cols=13 Identities=31% Similarity=0.693 Sum_probs=10.8
Q ss_pred CCcCcHHHHHhhc
Q 030650 161 PRTRTKEELKEAY 173 (174)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (174)
++.-+.+|||.||
T Consensus 12 ~~~As~~eIk~aY 24 (75)
T d1xbla_ 12 SKTAEEREIRKAY 24 (75)
T ss_dssp SSSCCHHHHHHHH
T ss_pred CCCcCHHHHHHHH
Confidence 4567899999998
No 6
>d2hg7a1 d.186.2.1 (A:1-60) Phage-like element PbsX protein XkdW {Bacillus subtilis [TaxId: 1423]}
Probab=7.37 E-value=67 Score=20.60 Aligned_cols=10 Identities=30% Similarity=0.411 Sum_probs=8.0
Q ss_pred CcHHHHHhhc
Q 030650 164 RTKEELKEAY 173 (174)
Q Consensus 164 ~~~~~~~~~~ 173 (174)
-|++||+|+|
T Consensus 41 PTe~EL~~~w 50 (60)
T d2hg7a1 41 PTQAELETWW 50 (60)
T ss_dssp CCHHHHHHHH
T ss_pred CcHHHHHHHH
Confidence 4788998876
No 7
>d1k8ke_ a.148.1.1 (E:) Arp2/3 complex 21 kDa subunit ARPC3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=6.20 E-value=69 Score=24.13 Aligned_cols=21 Identities=29% Similarity=0.653 Sum_probs=17.9
Q ss_pred hhhcCCCCCcCcHHHHHhhcC
Q 030650 154 LNSMRTPPRTRTKEELKEAYI 174 (174)
Q Consensus 154 ~nsm~~~~~~~~~~~~~~~~~ 174 (174)
.|+|...|..+..+|+-.+|+
T Consensus 112 Ln~~y~~P~~~~e~e~lR~Yl 132 (174)
T d1k8ke_ 112 LNAIYAKPANKQEDEVMRAYL 132 (174)
T ss_dssp TTTTSCCCSSHHHHHHHHHHH
T ss_pred cccccCCCCChHHHHHHHHHH
Confidence 588999999998888888874
No 8
>d2diga1 b.34.9.1 (A:8-62) Lamin-b receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.57 E-value=90 Score=19.65 Aligned_cols=6 Identities=50% Similarity=1.597 Sum_probs=5.3
Q ss_pred CCCCCC
Q 030650 130 PWPGRT 135 (174)
Q Consensus 130 RWP~~~ 135 (174)
|||+++
T Consensus 15 RwPgSs 20 (55)
T d2diga1 15 RWPGSS 20 (55)
T ss_dssp ECTTTC
T ss_pred ecCCCc
Confidence 999986
No 9
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=4.27 E-value=2.6e+02 Score=21.37 Aligned_cols=23 Identities=13% Similarity=0.128 Sum_probs=17.5
Q ss_pred HHHhhhcC--CCCCcCcHHHHHhhc
Q 030650 151 RRRLNSMR--TPPRTRTKEELKEAY 173 (174)
Q Consensus 151 r~~~nsm~--~~~~~~~~~~~~~~~ 173 (174)
++.++.|. +||+.-++|++++.|
T Consensus 362 ~~~~~~~~~~~np~~l~~d~i~~il 386 (390)
T d1oj7a_ 362 KLEEHGMTQLGENHDITLDVSRRIY 386 (390)
T ss_dssp HHHHTTCSSBTTTTCBCHHHHHHHH
T ss_pred HHHhcchhhcCCCCCCCHHHHHHHH
Confidence 44555553 689999999999877
No 10
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.15 E-value=1.7e+02 Score=18.60 Aligned_cols=13 Identities=23% Similarity=0.452 Sum_probs=10.5
Q ss_pred CCcCcHHHHHhhc
Q 030650 161 PRTRTKEELKEAY 173 (174)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (174)
+++-+.+|||.||
T Consensus 25 ~~~as~~eIk~aY 37 (94)
T d1wjza_ 25 DPSANMSDLKQKY 37 (94)
T ss_dssp CTTCCHHHHHHHH
T ss_pred CCCcCHHHHHHHH
Confidence 4567889999988
Done!