Query 030651
Match_columns 174
No_of_seqs 158 out of 786
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 03:23:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030651hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 99.9 2E-24 6.8E-29 176.4 10.5 104 71-174 7-110 (224)
2 3itq_A Prolyl 4-hydroxylase, a 99.9 2.3E-23 7.7E-28 171.6 6.6 96 73-174 28-123 (216)
3 3dkq_A PKHD-type hydroxylase S 98.9 3.5E-09 1.2E-13 88.3 6.7 89 78-173 13-110 (243)
4 2hbt_A EGL nine homolog 1; pro 97.9 4.3E-05 1.5E-09 63.3 9.5 89 83-173 25-129 (247)
5 2iuw_A Alkylated repair protei 90.7 3.4 0.00012 33.4 11.3 82 84-173 40-137 (238)
6 3s57_A Alpha-ketoglutarate-dep 86.5 4.1 0.00014 32.1 8.8 85 81-173 7-111 (204)
7 3tht_A Alkylated DNA repair pr 73.3 15 0.00051 31.5 8.4 25 81-105 108-132 (345)
8 1o51_A Hypothetical protein TM 45.5 21 0.00071 25.8 3.7 72 99-170 33-114 (114)
9 3dgp_A RNA polymerase II trans 40.1 19 0.00065 24.7 2.6 22 86-107 23-44 (80)
10 3i3q_A Alpha-ketoglutarate-dep 36.1 75 0.0026 25.0 6.0 32 142-173 85-116 (211)
11 3dom_A RNA polymerase II trans 32.1 29 0.00099 25.2 2.6 22 86-107 51-72 (108)
12 2opw_A Phyhd1 protein; double- 21.6 61 0.0021 25.7 3.0 22 86-107 17-38 (291)
13 2rdq_A 1-deoxypentalenic acid 20.5 67 0.0023 25.3 3.0 23 86-108 33-55 (288)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.91 E-value=2e-24 Score=176.43 Aligned_cols=104 Identities=44% Similarity=0.738 Sum_probs=98.0
Q ss_pred CCCCceeEEeccCccEEEEcCCCCHHHHHHHHHHhcCCcccceeeeCCCCCccccceeeeeeeeeCCCCcHHHHHHHHHH
Q 030651 71 GRAEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRI 150 (174)
Q Consensus 71 ~l~~~kvE~LS~dP~I~lyhdfLS~eEce~Li~lakp~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~~~~~vv~rI~~RI 150 (174)
.+.+.|+|+||++|+|++||||||++||++|+++++++|++|.++++.+|....+.+|+|+++|+...+++++++|.+||
T Consensus 7 ~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~~~~~~~~~i~~ri 86 (224)
T 2jig_A 7 EEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAKGEDSVISKIEKRV 86 (224)
T ss_dssp CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCTTCSHHHHHHHHHH
T ss_pred cccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecCCCCHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999987767767788999999999988899999999999
Q ss_pred HHhcCCCCCCCcceeeeeccCCCC
Q 030651 151 ADFTFFPLGMQFKFSLFFFYVLKK 174 (174)
Q Consensus 151 adlTGlp~e~~E~lQVlrY~i~~~ 174 (174)
++++|+|..+.|.+|++||+.|+.
T Consensus 87 ~~~~gl~~~~~e~~qv~rY~~G~~ 110 (224)
T 2jig_A 87 AQVTMIPLENHEGLQVLHYHDGQK 110 (224)
T ss_dssp HHHHTCCGGGBCCCEEEEEETTCC
T ss_pred HHHhCCCcccccceEEEecCCCcc
Confidence 999999999999999999999974
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.88 E-value=2.3e-23 Score=171.62 Aligned_cols=96 Identities=31% Similarity=0.402 Sum_probs=82.6
Q ss_pred CCceeEEeccCccEEEEcCCCCHHHHHHHHHHhcCCcccceeeeCCCCCccccceeeeeeeeeCCCCcHHHHHHHHHHHH
Q 030651 73 AEQWVEVISWEPRAFVYHNFLSKEECEYLINLATPHMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIAD 152 (174)
Q Consensus 73 ~~~kvE~LS~dP~I~lyhdfLS~eEce~Li~lakp~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~~~~~vv~rI~~RIad 152 (174)
...+++++|++|+|++||||||++||++|+++|+++|++|+|..+ ...+.+|+|+++|+.+ ++++++|++||++
T Consensus 28 r~v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~----~~~~~~RtS~~~wl~~--~~~v~~i~~Ri~~ 101 (216)
T 3itq_A 28 REIQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS----RDVNDIRTSSGAFLDD--NELTAKIEKRISS 101 (216)
T ss_dssp CEEEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC------------CCCCGGGTTCEECCC--CHHHHHHHHHHHH
T ss_pred ceEEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC----CccCCcEeeeeEEeCC--cHHHHHHHHHHHH
Confidence 456889999999999999999999999999999999999998221 3457899999999987 8999999999999
Q ss_pred hcCCCCCCCcceeeeeccCCCC
Q 030651 153 FTFFPLGMQFKFSLFFFYVLKK 174 (174)
Q Consensus 153 lTGlp~e~~E~lQVlrY~i~~~ 174 (174)
++|+|.+++|.+|++||+.|+.
T Consensus 102 ~~gl~~~~~E~lqv~~Y~~G~~ 123 (216)
T 3itq_A 102 IMNVPASHGEGLHILNYEVDQQ 123 (216)
T ss_dssp HHTSCGGGBCCCEEEEECBTCC
T ss_pred hcCceeccccceeEEEeCCCCc
Confidence 9999999999999999999974
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=98.85 E-value=3.5e-09 Score=88.35 Aligned_cols=89 Identities=11% Similarity=0.025 Sum_probs=67.4
Q ss_pred EEeccCccEEEEcCCCCHHHHHHHHHHhcC-CcccceeeeCCCCCccccceeeeeeeeeCCCCcHHHHHHHHHHHHhcCC
Q 030651 78 EVISWEPRAFVYHNFLSKEECEYLINLATP-HMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRDKIIRDIEKRIADFTFF 156 (174)
Q Consensus 78 E~LS~dP~I~lyhdfLS~eEce~Li~lakp-~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~~~~~vv~rI~~RIadlTGl 156 (174)
|-+-.++.+++||||||++||++||++++. .+.++.+. +... ..+...+.|+.. +++++++|.+||.+++|.
T Consensus 13 ~~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t----~g~~--~~~vr~n~~l~~-d~~~~~~l~~~i~~~l~~ 85 (243)
T 3dkq_A 13 ENLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQT----SGAM--ATTRKRNQQLDK-DDPVAVALGQQIMDRLLA 85 (243)
T ss_dssp -CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCC----SSBS--SCCCEEEEECCT-TCHHHHHHHHHHHHHHHT
T ss_pred cccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCccc----CCCc--cccceeeeEECC-CCHHHHHHHHHHHHHHcc
Confidence 456778999999999999999999999953 34443332 2212 233445677875 479999999999999887
Q ss_pred C--------CCCCcceeeeeccCCC
Q 030651 157 P--------LGMQFKFSLFFFYVLK 173 (174)
Q Consensus 157 p--------~e~~E~lQVlrY~i~~ 173 (174)
. ....|++|+.+|+.|+
T Consensus 86 ~~~f~~~~L~~~~e~~~~~rY~~G~ 110 (243)
T 3dkq_A 86 HPQFVSAALPLQFYPPLFNRYQGGE 110 (243)
T ss_dssp CHHHHHHHCEEEEEEEEEEEECTTC
T ss_pred CcchhhcccccccccceEEEECCCC
Confidence 6 2568999999999986
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=97.94 E-value=4.3e-05 Score=63.30 Aligned_cols=89 Identities=11% Similarity=0.103 Sum_probs=60.0
Q ss_pred CccEEEEcCCCCHHHHHHHHHHhcC-----CcccceeeeCCCCCccccceeeeeeeeeCCCCc--H----HHHHHHHHHH
Q 030651 83 EPRAFVYHNFLSKEECEYLINLATP-----HMRKSTVVDSDTGKSKDSRVRTSSGTFLARGRD--K----IIRDIEKRIA 151 (174)
Q Consensus 83 dP~I~lyhdfLS~eEce~Li~lakp-----~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~~~~--~----vv~rI~~RIa 151 (174)
.+-+++++|||+++||+.|++.++. .++++.+.+. +.......|++..+|+...+. + +..+|++.+.
T Consensus 25 ~~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~--~~~~~~~iR~d~i~wl~~~~~~~~~~~~l~~~i~~l~~ 102 (247)
T 2hbt_A 25 KHGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQ--KSDSSKDIRGDKITWIEGKEPGCETIGLLMSSMDDLIR 102 (247)
T ss_dssp HTSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEEC--CSSSTTCEECCEEEEECSCSTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccc--cccccccccccceeeecccccchhHHHHHHHHHHHHHH
Confidence 3457889999999999999988863 4777777652 223456799999999998642 2 3444554444
Q ss_pred HhcC-CCCC--C-CcceeeeeccC-CC
Q 030651 152 DFTF-FPLG--M-QFKFSLFFFYV-LK 173 (174)
Q Consensus 152 dlTG-lp~e--~-~E~lQVlrY~i-~~ 173 (174)
.+.+ +... + .+.+|+.+|.. |+
T Consensus 103 ~ln~~lGl~~i~~~~e~~~~~Y~~~G~ 129 (247)
T 2hbt_A 103 HCNGKLGSYKINGRTKAMVACYPGNGT 129 (247)
T ss_dssp HTTTTSTTCCEEEECCEEEEEECSSSC
T ss_pred HHhhhcCcccccccceEEEEEecCCCC
Confidence 3332 1221 1 36699999985 64
No 5
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=90.71 E-value=3.4 Score=33.41 Aligned_cols=82 Identities=13% Similarity=0.226 Sum_probs=48.5
Q ss_pred ccEEEEcCCCCHHHHHHHHHHhc--CCcccceeeeCCCCCccccceeeeeeeeeCC--------------CCcHHHHHHH
Q 030651 84 PRAFVYHNFLSKEECEYLINLAT--PHMRKSTVVDSDTGKSKDSRVRTSSGTFLAR--------------GRDKIIRDIE 147 (174)
Q Consensus 84 P~I~lyhdfLS~eEce~Li~lak--p~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~--------------~~~~vv~rI~ 147 (174)
|.+.+++|||+.+|.+.|.+.-. -.+........ |.......++ +|+.+ .-.+.+..|.
T Consensus 40 ~gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~--g~~~~~~R~~---~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~ 114 (238)
T 2iuw_A 40 SRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIRE--DITYQQPRLT---AWYGELPYTYSRITMEPNPHWHPVLRTLK 114 (238)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESS--SCEEECSSEE---EEEECCCTTSCHHHHCCBSSCCHHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHHHHHHhCCCccCceecC--CcccccCCee---EEcCCCccccCCcccCCCCCCCHHHHHHH
Confidence 45999999999999998876542 22333222111 2222222222 34331 1246788899
Q ss_pred HHHHHhcCCCCCCCcceeeeeccCCC
Q 030651 148 KRIADFTFFPLGMQFKFSLFFFYVLK 173 (174)
Q Consensus 148 ~RIadlTGlp~e~~E~lQVlrY~i~~ 173 (174)
+++++++|.+. +..-|..|..|+
T Consensus 115 ~~~~~~~g~~~---n~~LvN~Y~~G~ 137 (238)
T 2iuw_A 115 NRIEENTGHTF---NSLLCNLYRNEK 137 (238)
T ss_dssp HHHHHHHSCCC---CEEEEEEECSTT
T ss_pred HHHHHHhCCCC---CEEEEEEECCCC
Confidence 99999888654 345666777664
No 6
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=86.46 E-value=4.1 Score=32.14 Aligned_cols=85 Identities=12% Similarity=0.040 Sum_probs=49.9
Q ss_pred ccCccEEEEcCCCCHHHHHHHHHHh--cCCc---ccceeeeCCCCCccccceeeeeeeeeCCC---------------Cc
Q 030651 81 SWEPRAFVYHNFLSKEECEYLINLA--TPHM---RKSTVVDSDTGKSKDSRVRTSSGTFLARG---------------RD 140 (174)
Q Consensus 81 S~dP~I~lyhdfLS~eEce~Li~la--kp~L---~rS~Vv~~~tG~~~~s~~RTS~~awL~~~---------------~~ 140 (174)
-.+=..+.|.|||+++|++.|.+.- +..+ +...+.-. |+..... |. .+|..+. -.
T Consensus 7 ~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~--gk~~~~p-R~--~~wyg~~~~~Y~Ysg~~~~~~pwp 81 (204)
T 3s57_A 7 RAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVF--GKWHSVP-RK--QATYGDAGLTYTFSGLTLSPKPWI 81 (204)
T ss_dssp EETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEET--TEEEECS-SE--EEEEECTTCCEEETTEEECCEECC
T ss_pred eeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEEC--CeEeccC-cE--EEEECCCCCCcccCCCcccCCCCC
Confidence 3344567899999999999886532 3344 22222211 2221111 11 2344432 15
Q ss_pred HHHHHHHHHHHHhcCCCCCCCcceeeeeccCCC
Q 030651 141 KIIRDIEKRIADFTFFPLGMQFKFSLFFFYVLK 173 (174)
Q Consensus 141 ~vv~rI~~RIadlTGlp~e~~E~lQVlrY~i~~ 173 (174)
+.+..|.+++++++|.+.++ .-|..|..|+
T Consensus 82 ~~L~~l~~~~~~~~g~~~n~---~LvN~Y~~G~ 111 (204)
T 3s57_A 82 PVLERIRDHVSGVTGQTFNF---VLINRYKDGS 111 (204)
T ss_dssp HHHHHHHHHHHHHHCCCCSE---EEEEEESSTT
T ss_pred HHHHHHHHHHHHHhCCCCce---eEEEEECCCC
Confidence 79999999999999876543 4566676665
No 7
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=73.31 E-value=15 Score=31.48 Aligned_cols=25 Identities=24% Similarity=0.368 Sum_probs=21.2
Q ss_pred ccCccEEEEcCCCCHHHHHHHHHHh
Q 030651 81 SWEPRAFVYHNFLSKEECEYLINLA 105 (174)
Q Consensus 81 S~dP~I~lyhdfLS~eEce~Li~la 105 (174)
..-|-+.+++|||+++|.+.|++..
T Consensus 108 ~lp~Gl~~~p~fis~~Ee~~Ll~~i 132 (345)
T 3tht_A 108 ALPPGLMVVEEIISSEEEKMLLESV 132 (345)
T ss_dssp SCCTTEEEETTCSCHHHHHHHHTTC
T ss_pred cCCCceEEEcCcCCHHHHHHHHHhc
Confidence 5567799999999999999987655
No 8
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=45.51 E-value=21 Score=25.80 Aligned_cols=72 Identities=21% Similarity=0.154 Sum_probs=38.0
Q ss_pred HHHHHHhc-CCcccceeeeCCCCCccccceeeeeeeeeCCC---------CcHHHHHHHHHHHHhcCCCCCCCcceeeee
Q 030651 99 EYLINLAT-PHMRKSTVVDSDTGKSKDSRVRTSSGTFLARG---------RDKIIRDIEKRIADFTFFPLGMQFKFSLFF 168 (174)
Q Consensus 99 e~Li~lak-p~L~rS~Vv~~~tG~~~~s~~RTS~~awL~~~---------~~~vv~rI~~RIadlTGlp~e~~E~lQVlr 168 (174)
+.|++.++ .++.-++|..+-.|-......++...-.++.+ ..+-+.++-.++..+..-..-..|+.||++
T Consensus 33 ~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~ih~~~~l~ls~dlPV~Ie~Vd~~eki~~~l~~l~~~v~~Glvt~e~V~V~r 112 (114)
T 1o51_A 33 EYLVKRAYELGMKGVTVYRGIMGFGHKRHMHRSDFFSLSPDLPIVLEIVDEEERINLFLKEIDNIDFDGLVFTADVNVVK 112 (114)
T ss_dssp HHHHHHHHHTTCSCCEEEECSCCCCC-------------CCCEEEEEEEECHHHHHHHHHHHHTCCCCSEEEEEEEECCC
T ss_pred HHHHHHHHHCCCCeEEEEcCcEEECCCCCEEccceeecCCCCCEEEEEEcCHHHHHHHHHHHHHHhCCCEEEEEEEEEEe
Confidence 45665554 36777888776555443344454444333332 245677888888877764445688999999
Q ss_pred cc
Q 030651 169 FY 170 (174)
Q Consensus 169 Y~ 170 (174)
|+
T Consensus 113 ~~ 114 (114)
T 1o51_A 113 MG 114 (114)
T ss_dssp --
T ss_pred cC
Confidence 85
No 9
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=40.05 E-value=19 Score=24.71 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=20.2
Q ss_pred EEEEcCCCCHHHHHHHHHHhcC
Q 030651 86 AFVYHNFLSKEECEYLINLATP 107 (174)
Q Consensus 86 I~lyhdfLS~eEce~Li~lakp 107 (174)
-++|.||.|.+|-+.+.+.|+.
T Consensus 23 g~Ly~~F~s~~efe~~~~yA~e 44 (80)
T 3dgp_A 23 GSLYSDFETSQEYNLLSKYAQD 44 (80)
T ss_dssp EEEEECCSCHHHHHHHHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHH
Confidence 5899999999999999999974
No 10
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=36.13 E-value=75 Score=25.04 Aligned_cols=32 Identities=9% Similarity=-0.101 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCcceeeeeccCCC
Q 030651 142 IIRDIEKRIADFTFFPLGMQFKFSLFFFYVLK 173 (174)
Q Consensus 142 vv~rI~~RIadlTGlp~e~~E~lQVlrY~i~~ 173 (174)
.+..|.+|++..+|++.-..+..-|..|..|+
T Consensus 85 ~L~~l~~~~~~~~g~~~~~pn~~LvN~Y~~G~ 116 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDFQPDACLINRYAPGA 116 (211)
T ss_dssp HHHHHHHHHHHHTTCTTCCCCEEEEEEECTTC
T ss_pred HHHHHHHHHHHhcCCCCcCCCEEEEEEEcCCC
Confidence 78889999998888754344566677787765
No 11
>3dom_A RNA polymerase II transcription factor B subunit; protein-protein complex, heterodimer, beta-alpha-beta split, strand addition; 2.60A {Saccharomyces cerevisiae}
Probab=32.07 E-value=29 Score=25.17 Aligned_cols=22 Identities=23% Similarity=0.388 Sum_probs=20.2
Q ss_pred EEEEcCCCCHHHHHHHHHHhcC
Q 030651 86 AFVYHNFLSKEECEYLINLATP 107 (174)
Q Consensus 86 I~lyhdfLS~eEce~Li~lakp 107 (174)
-++|.||.|.+|-+.+.+.|+.
T Consensus 51 G~LY~dF~s~~efe~v~~yA~e 72 (108)
T 3dom_A 51 GSLYSDFETSQEYNLLSKYAQD 72 (108)
T ss_dssp EEEEECCSCHHHHHHHHHHHHH
T ss_pred eEEEecCCCHHHHHHHHHHHHH
Confidence 6899999999999999999974
No 12
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=21.64 E-value=61 Score=25.68 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=18.3
Q ss_pred EEEEcCCCCHHHHHHHHHHhcC
Q 030651 86 AFVYHNFLSKEECEYLINLATP 107 (174)
Q Consensus 86 I~lyhdfLS~eEce~Li~lakp 107 (174)
.+++.||++++||+.|.+....
T Consensus 17 yvvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 17 FLVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp EEEETTSSCHHHHHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHHHHHH
Confidence 4678999999999999876643
No 13
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=20.49 E-value=67 Score=25.34 Aligned_cols=23 Identities=9% Similarity=0.122 Sum_probs=18.6
Q ss_pred EEEEcCCCCHHHHHHHHHHhcCC
Q 030651 86 AFVYHNFLSKEECEYLINLATPH 108 (174)
Q Consensus 86 I~lyhdfLS~eEce~Li~lakp~ 108 (174)
.+++.||++++||+.|.+.....
T Consensus 33 yvvl~~~l~~e~v~~l~~~~~~~ 55 (288)
T 2rdq_A 33 YLFLRNVLDRDLVKTVAEQMREG 55 (288)
T ss_dssp EEEECSCSCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHHH
Confidence 35689999999999998777543
Done!