Query 030653
Match_columns 174
No_of_seqs 146 out of 2018
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 03:26:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030653.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030653hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 1.7E-31 6E-36 229.4 10.8 151 24-174 292-466 (536)
2 3fce_A D-alanine--poly(phospho 100.0 9.8E-31 3.4E-35 223.3 10.3 150 25-174 257-431 (512)
3 3e7w_A D-alanine--poly(phospho 100.0 1.8E-30 6E-35 221.9 11.6 150 25-174 256-430 (511)
4 4fuq_A Malonyl COA synthetase; 100.0 1.4E-30 4.7E-35 222.4 10.7 148 26-174 265-431 (503)
5 3l8c_A D-alanine--poly(phospho 100.0 8.4E-31 2.9E-35 224.0 9.0 150 25-174 260-435 (521)
6 4dg8_A PA1221; ANL superfamily 100.0 5.9E-30 2E-34 224.1 11.4 149 26-174 273-451 (620)
7 2d1s_A Luciferase, luciferin 4 100.0 1.3E-30 4.6E-35 224.7 7.0 148 27-174 307-473 (548)
8 4gr5_A Non-ribosomal peptide s 100.0 1.8E-30 6.1E-35 224.7 7.5 149 26-174 323-501 (570)
9 1mdb_A 2,3-dihydroxybenzoate-A 100.0 3.4E-30 1.2E-34 221.7 8.0 148 26-174 295-462 (539)
10 3rix_A Luciferase, luciferin 4 100.0 1.5E-30 5E-35 224.3 5.4 149 26-174 304-471 (550)
11 3etc_A AMP-binding protein; ad 100.0 1.5E-29 5E-34 219.8 10.8 146 27-174 339-507 (580)
12 3g7s_A Long-chain-fatty-acid-- 100.0 6.2E-29 2.1E-33 214.1 11.6 148 27-174 294-471 (549)
13 3rg2_A Enterobactin synthase c 100.0 8.1E-29 2.8E-33 216.2 12.4 147 27-174 300-466 (617)
14 3o83_A Peptide arylation enzym 100.0 1.1E-29 3.8E-34 218.6 6.8 147 27-174 305-471 (544)
15 1t5h_X 4-chlorobenzoyl COA lig 100.0 9.1E-29 3.1E-33 210.9 11.4 146 27-174 270-434 (504)
16 3r44_A Fatty acyl COA syntheta 100.0 2.6E-29 8.7E-34 215.2 7.5 146 25-174 280-445 (517)
17 3nyq_A Malonyl-COA ligase; A/B 100.0 5.3E-29 1.8E-33 212.8 9.3 146 28-174 271-438 (505)
18 3tsy_A Fusion protein 4-coumar 100.0 2E-29 6.8E-34 230.0 6.9 149 26-174 341-513 (979)
19 3gqw_A Fatty acid AMP ligase; 100.0 2.9E-29 9.8E-34 216.1 7.4 147 26-173 296-492 (576)
20 1v25_A Long-chain-fatty-acid-C 100.0 8E-29 2.7E-33 213.2 9.3 146 27-174 291-467 (541)
21 1amu_A GRSA, gramicidin synthe 100.0 1.5E-28 5.3E-33 212.6 10.3 145 27-174 291-462 (563)
22 3c5e_A Acyl-coenzyme A synthet 99.9 4.3E-28 1.5E-32 210.1 9.5 146 27-174 320-488 (570)
23 1pg4_A Acetyl-COA synthetase; 99.9 9.5E-28 3.2E-32 211.0 11.6 148 27-174 376-549 (652)
24 2v7b_A Benzoate-coenzyme A lig 99.9 2.7E-28 9.2E-33 209.0 7.9 143 30-174 301-461 (529)
25 2vsq_A Surfactin synthetase su 99.9 7.4E-28 2.5E-32 225.2 10.2 147 28-174 719-893 (1304)
26 3ivr_A Putative long-chain-fat 99.9 2.2E-28 7.6E-33 208.6 5.9 145 26-174 269-432 (509)
27 3ite_A SIDN siderophore synthe 99.9 2.1E-27 7.2E-32 204.8 8.6 147 26-173 291-459 (562)
28 1ry2_A Acetyl-coenzyme A synth 99.9 5.1E-27 1.7E-31 206.8 10.0 148 27-174 382-558 (663)
29 3kxw_A Saframycin MX1 syntheta 99.9 1.4E-27 4.8E-32 206.5 3.9 149 26-174 286-493 (590)
30 3ipl_A 2-succinylbenzoate--COA 99.9 1.8E-26 6E-31 196.4 10.5 141 30-174 275-430 (501)
31 3qov_A Phenylacetate-coenzyme 99.9 1.7E-22 5.8E-27 169.2 8.7 135 28-174 205-363 (436)
32 4gs5_A Acyl-COA synthetase (AM 99.9 5.6E-22 1.9E-26 163.0 8.3 132 27-173 146-284 (358)
33 2y4o_A Phenylacetate-coenzyme 99.8 2.1E-21 7.2E-26 162.9 8.8 135 28-174 211-367 (443)
34 2y27_A Phenylacetate-coenzyme 99.8 4.4E-21 1.5E-25 160.6 7.0 134 29-174 210-365 (437)
35 3t5a_A Long-chain-fatty-acid-- 99.8 7E-20 2.4E-24 154.3 6.4 116 25-140 307-480 (480)
36 3hgu_A EHPF; phenazine, antibi 98.7 3.2E-09 1.1E-13 86.6 2.6 111 28-150 230-368 (369)
37 4b2g_A GH3-1 auxin conjugating 98.3 7.3E-07 2.5E-11 77.7 6.2 116 29-163 305-458 (609)
38 4eql_A 4-substituted benzoates 98.3 1.6E-06 5.3E-11 75.4 7.1 117 29-164 300-447 (581)
39 4epl_A Jasmonic acid-amido syn 98.1 3.2E-06 1.1E-10 73.3 6.1 115 30-163 306-453 (581)
40 2cvi_A 75AA long hypothetical 23.8 60 0.0021 19.5 2.7 20 154-173 15-34 (83)
41 3dxs_X Copper-transporting ATP 22.5 63 0.0022 18.3 2.6 19 154-172 17-35 (74)
42 2djw_A Probable transcriptiona 22.3 84 0.0029 19.2 3.2 20 154-173 15-34 (92)
43 2kke_A Uncharacterized protein 21.5 79 0.0027 17.3 2.5 17 150-166 18-34 (53)
44 4a4j_A Pacszia, cation-transpo 20.9 73 0.0025 17.7 2.6 19 154-172 17-35 (69)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=99.97 E-value=1.7e-31 Score=229.40 Aligned_cols=151 Identities=33% Similarity=0.468 Sum_probs=131.0
Q ss_pred ccCCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec-------------------cCCccccccc-
Q 030653 24 LSNSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL-------------------LPSVVSSSLL- 83 (174)
Q Consensus 24 ~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~-------------------~~~~~~~~~~- 83 (174)
....+..++.+.+||+.+++++.+.+++.+|++++++.||+||++.+... .+.......+
T Consensus 292 ~~~~l~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~ 371 (536)
T 3ni2_A 292 DKHDLSSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGMTEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDP 371 (536)
T ss_dssp GGSCCTTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEECGGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECT
T ss_pred ccCCCccceEEEECCCCCCHHHHHHHHHHCCCCCccccccccccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeC
Confidence 34456779999999999999999999999999999999999998743221 1222222233
Q ss_pred ccCcccccCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHH
Q 030653 84 IRTLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEH 159 (174)
Q Consensus 84 ~~~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~ 159 (174)
..+..++.++.|||++ |++++|||++|+.|++.|+.+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||+
T Consensus 372 ~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~ 451 (536)
T 3ni2_A 372 ETGASLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEA 451 (536)
T ss_dssp TTCCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHH
T ss_pred CCCcCCCCCCccEEEEeCcccchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHH
Confidence 3356778899999999 99999999999999999988999999999999 9999999999999999999999999999
Q ss_pred HHhcCCCcceEEEeC
Q 030653 160 LLLSHPEMVDAAVIP 174 (174)
Q Consensus 160 ~l~~~~~V~~~~Vvg 174 (174)
+|.+||+|.+|+|+|
T Consensus 452 ~l~~~p~V~~a~Vv~ 466 (536)
T 3ni2_A 452 LLIAHPEISDAAVVG 466 (536)
T ss_dssp HHHTSTTEEEEEEEE
T ss_pred HHHhCCCcceEEEEe
Confidence 999999999999985
No 2
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=99.97 E-value=9.8e-31 Score=223.31 Aligned_cols=150 Identities=17% Similarity=0.187 Sum_probs=129.7
Q ss_pred cCCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeee-------------------ccCCccccccccc
Q 030653 25 SNSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHS-------------------LLPSVVSSSLLIR 85 (174)
Q Consensus 25 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~-------------------~~~~~~~~~~~~~ 85 (174)
...+..++.+.++|+.++++..+++.+.+|++++++.||+||++.+.. +.+.......+..
T Consensus 257 ~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 336 (512)
T 3fce_A 257 ESMLPNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLDQYKSLPVGYCKSDCRLLIMKED 336 (512)
T ss_dssp TTTSTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHHHCSSCCCEEECTTCEEEEECSS
T ss_pred chhCccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEeccccccccCCCccccccCCcEEEEECCC
Confidence 344667899999999999999999999999999999999999864322 2222223333556
Q ss_pred CcccccCCcCeEEe--CcccccccCCcccccccc---cCCCeEecCCeeee-CCeEEEEeccCCeEEECcEEeChHHHHH
Q 030653 86 TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATL---LPDGWMRTGDLCYE-DSFLFIVDGLKDLVKYKGCQVAPAELEH 159 (174)
Q Consensus 86 ~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~---~~~g~~~TGD~g~~-dG~l~~~GR~~d~i~~~G~~v~p~eVE~ 159 (174)
+..++.++.|||++ |+++.|||++|+.|++.| +.++||+|||+|++ ||+|+|+||+||+||++|++|+|.|||+
T Consensus 337 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~~dG~l~i~GR~~d~ik~~G~~v~p~eIE~ 416 (512)
T 3fce_A 337 GTIAPDGEKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDAGYVENGLLFYNGRLDFQIKLHGYRMELEEIEH 416 (512)
T ss_dssp SCBCCTTSCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEEETTEEEEEEEGGGCEEETTEEECHHHHHH
T ss_pred CCCCCCCCeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCceEEecCCEEEEecccCCEEEECCEEECHHHHHH
Confidence 67788899999999 999999999999999887 34679999999999 9999999999999999999999999999
Q ss_pred HHhcCCCcceEEEeC
Q 030653 160 LLLSHPEMVDAAVIP 174 (174)
Q Consensus 160 ~l~~~~~V~~~~Vvg 174 (174)
+|.+||+|.+|+|+|
T Consensus 417 ~l~~~p~V~~a~vv~ 431 (512)
T 3fce_A 417 HLRACSYVEGAVIVP 431 (512)
T ss_dssp HHHHSTTEEEEEEEE
T ss_pred HHHhCCCcceEEEEE
Confidence 999999999999974
No 3
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=99.97 E-value=1.8e-30 Score=221.86 Aligned_cols=150 Identities=19% Similarity=0.244 Sum_probs=129.5
Q ss_pred cCCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeee-------------------eccCCccccccccc
Q 030653 25 SNSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCH-------------------SLLPSVVSSSLLIR 85 (174)
Q Consensus 25 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~-------------------~~~~~~~~~~~~~~ 85 (174)
...+..++.+.++|+.++++..+.+.+.+|++++++.||+||++.+. .+.+.......+.+
T Consensus 256 ~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~ 335 (511)
T 3e7w_A 256 QDLLPHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVISRSESLPVGFAKPDMNIFIMDEE 335 (511)
T ss_dssp TTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHTTCSSCCCBEECTTCEEEEECTT
T ss_pred cccCCcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccccCCcCCCcceeCCCEEEEECCC
Confidence 34566789999999999999999999999999999999999986422 22233333444556
Q ss_pred CcccccCCcCeEEe--CcccccccCCccccccccc-CCC--eEecCCeeee-CCeEEEEeccCCeEEECcEEeChHHHHH
Q 030653 86 TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLL-PDG--WMRTGDLCYE-DSFLFIVDGLKDLVKYKGCQVAPAELEH 159 (174)
Q Consensus 86 ~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~-~~g--~~~TGD~g~~-dG~l~~~GR~~d~i~~~G~~v~p~eVE~ 159 (174)
+..++.++.|||++ |+++.|||++|+.|++.|. .+| ||+|||+|++ ||+|+|+||+||+||++|++|+|.|||+
T Consensus 336 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDlg~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~ 415 (511)
T 3e7w_A 336 GQPLPEGEKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDAGFIQDGQIFCQGRLDFQIKLHGYRMELEEIEF 415 (511)
T ss_dssp SCBCCTTCCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEEEEEETTEEEEEEESSSEEEETTEEEEHHHHHH
T ss_pred CCCCCCCCceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCeEEccCCeEEEEccccCEEEECCEEeCHHHHHH
Confidence 77888899999999 9999999999999999883 233 8999999999 9999999999999999999999999999
Q ss_pred HHhcCCCcceEEEeC
Q 030653 160 LLLSHPEMVDAAVIP 174 (174)
Q Consensus 160 ~l~~~~~V~~~~Vvg 174 (174)
+|.+||.|.+|+|+|
T Consensus 416 ~l~~~p~V~~a~vv~ 430 (511)
T 3e7w_A 416 HVRQSQYVRSAVVIP 430 (511)
T ss_dssp HHHHSTTEEEEEEEE
T ss_pred HHHhCCCcceEEEEE
Confidence 999999999999984
No 4
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=99.97 E-value=1.4e-30 Score=222.45 Aligned_cols=148 Identities=23% Similarity=0.220 Sum_probs=128.6
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeee--------------eccCCccccccc-ccCcccc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCH--------------SLLPSVVSSSLL-IRTLSMW 90 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~--------------~~~~~~~~~~~~-~~~~~~~ 90 (174)
..+..++.+.+|++.++++..+.+.+.+ +.++++.||+||++.+. .+.+.......+ ..+..++
T Consensus 265 ~~~~~lr~~~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~ 343 (503)
T 4fuq_A 265 ETTGHMRLFISGSAPLLADTHREWSAKT-GHAVLERYGMTETNMNTSNPYDGDRVPGAVGPALPGVSARVTDPETGKELP 343 (503)
T ss_dssp TTTTTCCEEEECSSCCCHHHHHHHHHHH-SCCEEECCEETTTEECBCCCSSSCCCTTEEEEBCTTCEEEEECTTTCCBCC
T ss_pred cchhhcEEEEECCCCCCHHHHHHHHHHh-CCCccceEcccccCcccccCCCCCCcCCccccCCCCeEEEEEECCCCCCCc
Confidence 3456789999999999999999999887 47899999999987432 222333333334 4566788
Q ss_pred cCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCC
Q 030653 91 VAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 91 ~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
.++.|||++ |++++|||++|+.|++.|..+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+
T Consensus 344 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~ 423 (503)
T 4fuq_A 344 RGDIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKEIESEIDAMPG 423 (503)
T ss_dssp TTCCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEETTEEECHHHHHHHHHTSTT
T ss_pred CCCceEEEEECCchhhhhcCChhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCC
Confidence 899999999 99999999999999999988999999999999 99999999999999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+++|+|
T Consensus 424 V~~a~vv~ 431 (503)
T 4fuq_A 424 VVESAVIG 431 (503)
T ss_dssp EEEEEEEE
T ss_pred eeEEEEEE
Confidence 99999975
No 5
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=99.97 E-value=8.4e-31 Score=223.99 Aligned_cols=150 Identities=16% Similarity=0.209 Sum_probs=127.3
Q ss_pred cCCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCccee-------------------eeeccCCccccccccc
Q 030653 25 SNSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSST-------------------CHSLLPSVVSSSLLIR 85 (174)
Q Consensus 25 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~-------------------~~~~~~~~~~~~~~~~ 85 (174)
...+..++.+.++|+.++++..+++.+.+|++++++.||+||++. ++.+.+.......+.+
T Consensus 260 ~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~ 339 (521)
T 3l8c_A 260 QAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIIDED 339 (521)
T ss_dssp TTTCTTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHHHHHCSSCEEEEECTTSCEEEECTT
T ss_pred cccCccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeecccccccCCCccccccccCCCEEEEECCC
Confidence 345677899999999999999999999999999999999999863 2333344444445666
Q ss_pred CcccccCCcCeEEe--CcccccccCCcccccccc---cCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHH
Q 030653 86 TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATL---LPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELE 158 (174)
Q Consensus 86 ~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~---~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE 158 (174)
+.+++.++.|||++ |+++.|||++|+.|++.| +.++||+|||+|++ ||+++|+||+||+||++|++|+|.|||
T Consensus 340 g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE 419 (521)
T 3l8c_A 340 GKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELEDVS 419 (521)
T ss_dssp SCBCCTTCCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHHHH
T ss_pred cCCCCCCCceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHHHH
Confidence 77888899999999 999999999999999987 45689999999999 999999999999999999999999999
Q ss_pred HHHhcCCCcceEEEeC
Q 030653 159 HLLLSHPEMVDAAVIP 174 (174)
Q Consensus 159 ~~l~~~~~V~~~~Vvg 174 (174)
++|.+||+|.+|+|++
T Consensus 420 ~~l~~~p~V~~a~vv~ 435 (521)
T 3l8c_A 420 QQLNQSPMVASAVAVP 435 (521)
T ss_dssp HHHHTSTTEEEEEEEC
T ss_pred HHHHcCCCcceEEEEE
Confidence 9999999999999885
No 6
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=99.96 E-value=5.9e-30 Score=224.06 Aligned_cols=149 Identities=19% Similarity=0.154 Sum_probs=126.6
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeee------------------ccCCcccccccccCc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHS------------------LLPSVVSSSLLIRTL 87 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~------------------~~~~~~~~~~~~~~~ 87 (174)
..+..++.+.+||+.++++.++++.+.+|++++++.||.||++.+.. +.++......+.++.
T Consensus 273 ~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~ 352 (620)
T 4dg8_A 273 DCLGGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEEDDIPIGKAIAGTAVLLLDEHGQ 352 (620)
T ss_dssp GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGGGSSSCCCBEECTTEEEEEECTTSC
T ss_pred hhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccccCCCCCCceecccCcEEEEECccCC
Confidence 34567899999999999999999999999999999999999874322 112222222344444
Q ss_pred c-cccCCcCeEEe--CcccccccCCcccccccccCC-------CeEecCCeeee--CCeEEEEeccCCeEEECcEEeChH
Q 030653 88 S-MWVAVLGSKFV--KLISAGYVGEQEVTSATLLPD-------GWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPA 155 (174)
Q Consensus 88 ~-~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~-------g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~ 155 (174)
. ++.++.|||++ |++++|||++|+.|+++|..+ +||+|||+|++ ||+|+|+||+||+||++|+||+|.
T Consensus 353 ~~~~~g~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~ 432 (620)
T 4dg8_A 353 EIAEPDRAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLP 432 (620)
T ss_dssp BCCSSSCCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEHH
T ss_pred CCCCCCCceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCHH
Confidence 4 56789999999 999999999999999998542 79999999999 999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEeC
Q 030653 156 ELEHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 156 eVE~~l~~~~~V~~~~Vvg 174 (174)
|||++|.+||+|.+|+|++
T Consensus 433 eIE~~l~~~p~V~~a~Vv~ 451 (620)
T 4dg8_A 433 ALEQRFRRQPGILDCALLV 451 (620)
T ss_dssp HHHHHHHTSTTEEEEEEEE
T ss_pred HHHHHHHhCCCccEEEEEE
Confidence 9999999999999999974
No 7
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=99.96 E-value=1.3e-30 Score=224.68 Aligned_cols=148 Identities=29% Similarity=0.430 Sum_probs=129.1
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeecc--------------CCccccccc-ccCccccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLL--------------PSVVSSSLL-IRTLSMWV 91 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~--------------~~~~~~~~~-~~~~~~~~ 91 (174)
.+..++.+.++|+.++++..+++++.+|+.++++.||+||++.+.... +.......+ ..+..++.
T Consensus 307 ~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~ 386 (548)
T 2d1s_A 307 DLSNLVEIASGGAPLSKEVGEAVARRFNLPGVRQGYGLTETTSAIIITPEGDDKPGASGKVVPLFKAKVIDLDTKKSLGP 386 (548)
T ss_dssp CCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTTCCCTTCCBEECTTCEEEEECTTTCCBCCT
T ss_pred cccceeEEEEcCccCCHHHHHHHHHHcCCCceeeccccccccceeeecCcccCCCCCCCccCCCceEEEEeCCcCccCCC
Confidence 456789999999999999999999999999999999999987543322 121222223 34567778
Q ss_pred CCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCCc
Q 030653 92 AVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPEM 167 (174)
Q Consensus 92 ~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~V 167 (174)
++.|||++ |++++|||++|+.|++.|+.+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+|
T Consensus 387 g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V 466 (548)
T 2d1s_A 387 NRRGEVCVKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSI 466 (548)
T ss_dssp TCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHHHHHHHHTSTTE
T ss_pred CCCeEEEECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHHHHHHHHhCCCc
Confidence 89999999 99999999999999999978999999999999 999999999999999999999999999999999999
Q ss_pred ceEEEeC
Q 030653 168 VDAAVIP 174 (174)
Q Consensus 168 ~~~~Vvg 174 (174)
.+|+|+|
T Consensus 467 ~~a~V~~ 473 (548)
T 2d1s_A 467 FDAGVAG 473 (548)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999985
No 8
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=99.96 E-value=1.8e-30 Score=224.72 Aligned_cols=149 Identities=26% Similarity=0.264 Sum_probs=96.7
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceee------------------eeccCCcccccccccCc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTC------------------HSLLPSVVSSSLLIRTL 87 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~------------------~~~~~~~~~~~~~~~~~ 87 (174)
..+..++.+.+||+.++++.++++.+.+|++++++.||+||++.+ +.+.+.....+.+.++.
T Consensus 323 ~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~~~ 402 (570)
T 4gr5_A 323 EAFEGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGDLSGTALPIGVPLAGKRAYVLDDDLK 402 (570)
T ss_dssp GGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGGTTSSSCCCBEECTTEEEEEECTTSC
T ss_pred hhCCCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccccCCCccccceeeCCCEEEEECCCCC
Confidence 346678999999999999999999999999999999999998632 22223333334455677
Q ss_pred ccccCCcCeEEe--CcccccccCCcccccccccC--------CCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChH
Q 030653 88 SMWVAVLGSKFV--KLISAGYVGEQEVTSATLLP--------DGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPA 155 (174)
Q Consensus 88 ~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~--------~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~ 155 (174)
.++.++.|||++ |+++.|||++|+.|+++|.. ++||+|||+|++ ||+|+|+||+||+||++|+||+|.
T Consensus 403 ~~~~G~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~ 482 (570)
T 4gr5_A 403 PAANGALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVEPG 482 (570)
T ss_dssp BCCTTCEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC---------------
T ss_pred CCCCCCcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeCHH
Confidence 888899999999 99999999999999998843 379999999999 999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEeC
Q 030653 156 ELEHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 156 eVE~~l~~~~~V~~~~Vvg 174 (174)
|||++|.+||+|.+|+|+|
T Consensus 483 eIE~~l~~~p~V~~a~Vv~ 501 (570)
T 4gr5_A 483 EVEARLVGHPAVRQAAVLA 501 (570)
T ss_dssp -------------------
T ss_pred HHHHHHhcCCCcceEEEEE
Confidence 9999999999999999985
No 9
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=99.96 E-value=3.4e-30 Score=221.66 Aligned_cols=148 Identities=20% Similarity=0.254 Sum_probs=127.5
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec---------------cCCc-ccccccccCccc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL---------------LPSV-VSSSLLIRTLSM 89 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~---------------~~~~-~~~~~~~~~~~~ 89 (174)
..+..++.+.+||+.++++..+++++.+ ++++++.||+||+...... .+.. .....+..+..+
T Consensus 295 ~~l~~lr~~~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~ 373 (539)
T 1mdb_A 295 DDLSSLQVLQVGGAKFSAEAARRVKAVF-GCTLQQVFGMAEGLVNYTRLDDPEEIIVNTQGKPMSPYDESRVWDDHDRDV 373 (539)
T ss_dssp CCCTTCCEEEEESSCCCHHHHTTHHHHT-CSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEESSTTCEEEEECTTSCBC
T ss_pred CCccceeEEEEcCCCCCHHHHHHHHHHh-CCcEEEEEcCCCCcccccCCCCcHHhcCCCCCcccCCCceEEEECCCCCCC
Confidence 3567889999999999999999999988 5899999999996533221 1111 122234456677
Q ss_pred ccCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCC
Q 030653 90 WVAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHP 165 (174)
Q Consensus 90 ~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~ 165 (174)
+.++.|||++ |++++|||++|+.|++.|..+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||
T Consensus 374 ~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p 453 (539)
T 1mdb_A 374 KPGETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHP 453 (539)
T ss_dssp CTTCCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTST
T ss_pred cCCCcceEEeeCcccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHHHHHHHHhCC
Confidence 8899999999 99999999999999999988999999999999 8999999999999999999999999999999999
Q ss_pred CcceEEEeC
Q 030653 166 EMVDAAVIP 174 (174)
Q Consensus 166 ~V~~~~Vvg 174 (174)
+|.+|+|+|
T Consensus 454 ~V~~a~vv~ 462 (539)
T 1mdb_A 454 AVHDAAMVS 462 (539)
T ss_dssp TEEEEEEEE
T ss_pred CcceEEEEe
Confidence 999999985
No 10
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=99.96 E-value=1.5e-30 Score=224.30 Aligned_cols=149 Identities=32% Similarity=0.466 Sum_probs=94.8
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeee--------------ccCCccccccc-ccCcccc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHS--------------LLPSVVSSSLL-IRTLSMW 90 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~--------------~~~~~~~~~~~-~~~~~~~ 90 (174)
..+..++.+.++|+.+++++.+++++.++...+++.||+||++.... +.+.......+ ..+..++
T Consensus 304 ~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~ 383 (550)
T 3rix_A 304 YDLSNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDTGKTLG 383 (550)
T ss_dssp SCCTTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTTCCCTTEEEEECTTCEEEEECTTTCCBCC
T ss_pred cCcccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceecCCCCCCCCCCcccccCCcEEEEEeCCCCcCCC
Confidence 44677899999999999999999999998878999999999874433 22333333333 3456778
Q ss_pred cCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCC
Q 030653 91 VAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 91 ~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
.++.|||++ |+++.|||++|+.|++.|+.+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+
T Consensus 384 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~ 463 (550)
T 3rix_A 384 VNQRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPN 463 (550)
T ss_dssp TTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC----------------------------
T ss_pred CCCCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHHHHHHHHhCCC
Confidence 899999999 99999999999999999988999999999999 99999999999999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+|+|+|
T Consensus 464 V~~a~vv~ 471 (550)
T 3rix_A 464 IFDAGVAG 471 (550)
T ss_dssp --------
T ss_pred cceEEEEE
Confidence 99999875
No 11
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=99.96 E-value=1.5e-29 Score=219.83 Aligned_cols=146 Identities=18% Similarity=0.221 Sum_probs=127.2
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeee--------------eccCCcccccccccCcccccC
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCH--------------SLLPSVVSSSLLIRTLSMWVA 92 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 92 (174)
.+..++.+.++|+.+++++++++++.+ ++++++.||+||++.+. .+.+.......+.++..++.+
T Consensus 339 ~l~~lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~g~~~~~g 417 (580)
T 3etc_A 339 NFSTLKYAVVAGEPLNPEVFNRFLEFT-GIKLMEGFGQTETVVTIATFPWMEPKPGSIGKPTPGYKIELMDRDGRLCEVG 417 (580)
T ss_dssp CCTTCCEEEECSSCCCHHHHHHHHHHH-SCCCEEEECCTTSSCCEECCTTSCCCTTCCBEECTTCEEEEECTTSCBCCTT
T ss_pred CCccceEEEEccCCCCHHHHHHHHHHh-CCeEecccccccccceeecCCCCCCCCCccccCCCCCEEEEECCCCCCCCCC
Confidence 346789999999999999999999876 67899999999986432 223333344445567788889
Q ss_pred CcCeEEe-------CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhc
Q 030653 93 VLGSKFV-------KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLS 163 (174)
Q Consensus 93 ~~Gel~v-------~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~ 163 (174)
+.|||++ +++++|||++|+.|++.| .+|||+|||+|++ ||+|+|+||+||+||++|+||+|.|||++|.+
T Consensus 418 ~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f-~~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~ 496 (580)
T 3etc_A 418 EEGEIVINTMEGKPVGLFVHYGKDPERTEETW-HDGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFEVESALIQ 496 (580)
T ss_dssp CCEEEEEECTTCCCTTCCCEETTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHHHHHHHTT
T ss_pred CceEEEEecCCCCCCeeeccccCCHhHHHhhc-CCCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 9999998 469999999999999999 5899999999999 99999999999999999999999999999999
Q ss_pred CCCcceEEEeC
Q 030653 164 HPEMVDAAVIP 174 (174)
Q Consensus 164 ~~~V~~~~Vvg 174 (174)
||+|.+|+|+|
T Consensus 497 ~p~V~~a~Vvg 507 (580)
T 3etc_A 497 HPAVLECAITG 507 (580)
T ss_dssp STTEEEEEEEE
T ss_pred CCCeeeEEEEe
Confidence 99999999985
No 12
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=99.96 E-value=6.2e-29 Score=214.06 Aligned_cols=148 Identities=22% Similarity=0.298 Sum_probs=114.9
Q ss_pred CccccceEEEccccCChhhHHHHHhh----C--CCCeEEcCCCCCcceeeeecc---------------CCccccccc-c
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHT----L--PTRRLLLPSVLSSSSTCHSLL---------------PSVVSSSLL-I 84 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~----~--p~~~i~~~yg~te~~~~~~~~---------------~~~~~~~~~-~ 84 (174)
.+..++.+.+|++.+++++.+.+.+. + |++++++.||+||++.+.... +.......+ .
T Consensus 294 ~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~ 373 (549)
T 3g7s_A 294 DWSYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLRLDKSTTQGVPMSDIELKVISLE 373 (549)
T ss_dssp CCTTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGGGGGTTSCCEECTTCEEEEECSS
T ss_pred CccceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhhcCCccccCcCCCccccCCCCEEEEEeCC
Confidence 45678999999999999999999987 4 458999999999987543322 222222333 4
Q ss_pred cCcccccCCcCeEEe--CcccccccCCccccccccc--CCC--eEecCCeeee--CCeEEEEeccCCeEEECcEEeChHH
Q 030653 85 RTLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLL--PDG--WMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAE 156 (174)
Q Consensus 85 ~~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~--~~g--~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~e 156 (174)
.+..++.++.|||++ |++++|||++|+.|++.|. .+| ||+|||+|++ ||+|+|+||+||+||++|++|+|.|
T Consensus 374 ~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 453 (549)
T 3g7s_A 374 DGRELGVGESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFE 453 (549)
T ss_dssp SCCEECTTCCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------CHH
T ss_pred CCcCCCCCCceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHH
Confidence 566778899999999 9999999999999999883 566 9999999999 9999999999999999999999999
Q ss_pred HHHHHhcCCCcceEEEeC
Q 030653 157 LEHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 157 VE~~l~~~~~V~~~~Vvg 174 (174)
||++|.+||+|.+|+|+|
T Consensus 454 IE~~l~~~p~V~~a~Vv~ 471 (549)
T 3g7s_A 454 LEALLMKHEAVMDVAVIG 471 (549)
T ss_dssp HHHHHTTSTTEEEEEEEC
T ss_pred HHHHHHhCCCeeeEEEEe
Confidence 999999999999999986
No 13
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=99.96 E-value=8.1e-29 Score=216.24 Aligned_cols=147 Identities=18% Similarity=0.224 Sum_probs=128.4
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeecc----------------CCcccccccccCcccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLL----------------PSVVSSSLLIRTLSMW 90 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~----------------~~~~~~~~~~~~~~~~ 90 (174)
.+..++.+.+||+.+++.+.+++.+.+ ++++++.||.||++.+.... +.......+..+..++
T Consensus 300 ~l~~lr~i~~gGe~l~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~p 378 (617)
T 3rg2_A 300 QLASLKLLQVGGARLSATLAARIPAEI-GCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLP 378 (617)
T ss_dssp TTTTCCEEEEESSCCCHHHHHHHHHHT-CSEEEEEEEETTEEEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCC
T ss_pred cCCCccEEEEcCCcCCHHHHHHHHHHh-CCcEEEEeccCcceeecccCCCcccccccCCCccCCCCceEEEECCCCCCCC
Confidence 467789999999999999999999987 68999999999987443221 1112222355567888
Q ss_pred cCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCC
Q 030653 91 VAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 91 ~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
.++.|||++ |++++|||++|+.|+++|..++||+|||+|++ ||+|+|+||+||+||++|+||+|.|||++|.+||+
T Consensus 379 ~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p~ 458 (617)
T 3rg2_A 379 QGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPA 458 (617)
T ss_dssp TTCCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHHHHTTSTT
T ss_pred CCCceEEEecCccccchhcCChhhhhhccCCCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHHHHHhCCC
Confidence 899999999 99999999999999999988999999999999 99999999999999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+++|++
T Consensus 459 V~~a~vv~ 466 (617)
T 3rg2_A 459 VIYAALVS 466 (617)
T ss_dssp EEEEEEEE
T ss_pred eeEEEEEe
Confidence 99999874
No 14
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=99.96 E-value=1.1e-29 Score=218.63 Aligned_cols=147 Identities=20% Similarity=0.231 Sum_probs=97.1
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeecc----------------CCcccccccccCcccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLL----------------PSVVSSSLLIRTLSMW 90 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~----------------~~~~~~~~~~~~~~~~ 90 (174)
.+..++.+.+||+.+++++.+.+++.+ ++++++.||+||++...... +.......+..+..++
T Consensus 305 ~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~~i~d~~~~~~~ 383 (544)
T 3o83_A 305 QIQSLKLLQVGGASFPESLARQVPEVL-NCKLQQVFGMAEGLVNYTRLDDSDEQIFTTQGRPISSDDEIKIVDEQYREVP 383 (544)
T ss_dssp HHTTCCEEEEESSCCCHHHHTHHHHHH-CSEEEEEEECTTSCEEECCTTSCHHHHHHCCCEESCTTCEEEEECTTSCBCC
T ss_pred cCCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEeeeccccccceeecCCCchhhccCCCceecCCCcEEEEECCCCCCCC
Confidence 456789999999999999999999988 68999999999986433211 2222233355667788
Q ss_pred cCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCC
Q 030653 91 VAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 91 ~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
.++.|||++ |+++.|||++|+.|++.|..+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+
T Consensus 384 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~ 463 (544)
T 3o83_A 384 EGEIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEEIEKLILLHPE 463 (544)
T ss_dssp TTCCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSCEEEEEEEC------------------------
T ss_pred CCCeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHHHHHHHHhCCC
Confidence 899999999 99999999999999999988999999999999 99999999999999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+++|+|
T Consensus 464 V~~a~vv~ 471 (544)
T 3o83_A 464 VMHAALVA 471 (544)
T ss_dssp --------
T ss_pred ccEEEEEe
Confidence 99999875
No 15
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=99.96 E-value=9.1e-29 Score=210.92 Aligned_cols=146 Identities=18% Similarity=0.206 Sum_probs=123.8
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec-----------cCCcccccccccC---cccccC
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL-----------LPSVVSSSLLIRT---LSMWVA 92 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~-----------~~~~~~~~~~~~~---~~~~~~ 92 (174)
.+..++.+.++|+.+++++.+.+++.++ ..+++.||+||+..+... .+.......+..+ ..++.+
T Consensus 270 ~l~~lr~~~~gG~~l~~~~~~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~g~p~~~~~~~i~~~~~~~~~~~~~g 348 (504)
T 1t5h_X 270 KLDSLRHVTFAGATMPDAVLETVHQHLP-GEKVNIYGTTEAMNSLYMRQPKTGTEMAPGFFSEVRIVRIGGGVDEIVANG 348 (504)
T ss_dssp CCTTCCEEEECCTTCCHHHHHHHHHHCC-SEEEEEEEETTTEEEEEEESCSSSSEEBCCTTCCEEEECTTSCTTCBCCTT
T ss_pred cCccccEEEEcCCcCCHHHHHHHHHhcC-cceeeeeccccccccccccCCCCCccccCCCCCceeEEeccCCCCCcCCCC
Confidence 4577899999999999999999999986 689999999998432221 1111122223333 567778
Q ss_pred CcCeEEe---CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCCc
Q 030653 93 VLGSKFV---KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPEM 167 (174)
Q Consensus 93 ~~Gel~v---~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~V 167 (174)
+.|||++ |.++.|||++|+.|++.| .+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+|
T Consensus 349 ~~GEl~v~gg~~~~~GY~~~~~~t~~~f-~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V 427 (504)
T 1t5h_X 349 EEGELIVAASDSAFVGYLNQPQATAEKL-QDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGV 427 (504)
T ss_dssp CCEEEEEECCTTSCCCBTTCHHHHHHHE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHTTSTTE
T ss_pred CcceEEEeCCceeeceecCCchhhhhhh-cCCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHHHHHHHHhCCCc
Confidence 9999998 789999999999999999 6899999999999 999999999999999999999999999999999999
Q ss_pred ceEEEeC
Q 030653 168 VDAAVIP 174 (174)
Q Consensus 168 ~~~~Vvg 174 (174)
.+|+|+|
T Consensus 428 ~~a~Vv~ 434 (504)
T 1t5h_X 428 TEVVVIG 434 (504)
T ss_dssp EEEEEEE
T ss_pred ceEEEEE
Confidence 9999985
No 16
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=99.95 E-value=2.6e-29 Score=215.21 Aligned_cols=146 Identities=21% Similarity=0.246 Sum_probs=122.2
Q ss_pred cCCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeecc----------------CCcccccccccCcc
Q 030653 25 SNSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLL----------------PSVVSSSLLIRTLS 88 (174)
Q Consensus 25 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~----------------~~~~~~~~~~~~~~ 88 (174)
...+..++.+.+||+.+++++.+.+.+. ++++++.||+||++...... +.......+..+..
T Consensus 280 ~~~~~~lr~i~~gGe~l~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~ 357 (517)
T 3r44_A 280 ELDAPDFRYFITGGAPMPEALIKIYAAK--NIEVVQGYALTESCGGGTLLLSEDALRKAGSAGRATMFTDVAVRGDDGVI 357 (517)
T ss_dssp HCCCTTCCEEEECSSCCCHHHHHHHHHT--TCEEEEEEECGGGTTCEEEECGGGTTTTTTCCBEECTTEEEEEECTTSCE
T ss_pred cCCCCcccEEEECCCCCCHHHHHHHHhc--CCcEEEeecccccccceeecCCccccccCCCCCcCCCCeEEEEECCCCCC
Confidence 3455678999999999999999999886 78999999999986432221 11111122333444
Q ss_pred cccCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcC
Q 030653 89 MWVAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSH 164 (174)
Q Consensus 89 ~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~ 164 (174)
++.+ .|||++ |+++.|||++|+.|++.| .+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+|
T Consensus 358 ~~~g-~GEl~v~g~~v~~GY~~~p~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~ 435 (517)
T 3r44_A 358 REHG-EGEVVIKSDILLKEYWNRPEATRDAF-DNGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGV 435 (517)
T ss_dssp ESSE-EEEEEEEETTSCSEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHHHHHHHTTS
T ss_pred CCCC-CeEEEEeCcchhhhhCCChhhhHhhh-cCCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHHHHHHHHhC
Confidence 4555 799999 999999999999999999 6899999999999 999999999999999999999999999999999
Q ss_pred CCcceEEEeC
Q 030653 165 PEMVDAAVIP 174 (174)
Q Consensus 165 ~~V~~~~Vvg 174 (174)
|+|.+|+|+|
T Consensus 436 p~V~~~~Vv~ 445 (517)
T 3r44_A 436 PGVSEVAVIG 445 (517)
T ss_dssp TTEEEEEEEE
T ss_pred CCEeEEEEEe
Confidence 9999999985
No 17
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=99.95 E-value=5.3e-29 Score=212.83 Aligned_cols=146 Identities=27% Similarity=0.362 Sum_probs=121.5
Q ss_pred ccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeecc--------------CCcccccccccCccccc--
Q 030653 28 LAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLL--------------PSVVSSSLLIRTLSMWV-- 91 (174)
Q Consensus 28 ~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~--------------~~~~~~~~~~~~~~~~~-- 91 (174)
+..++.+.+|++.+++...+++.+.+ +.++++.||+||++...... +.......+.++..++.
T Consensus 271 l~~lr~i~~gg~~l~~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~g~~~~~~~ 349 (505)
T 3nyq_A 271 LAGARLLVSGSAALPVHDHERIAAAT-GRRVIERYGMTETLMNTSVRADGEPRAGTVGVPLPGVELRLVEEDGTPIAALD 349 (505)
T ss_dssp HHHCSEEEECSSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECCTTSCCCTTCCCEECTTCEEEEC-----CCCCCC
T ss_pred cccceEEEECCCCCCHHHHHHHHHhc-CCeeecccchhhcccccccCCCCCCCCCCcccCCCCCEEEEECCCCCCcccCC
Confidence 45578999999999999999999876 67999999999987543322 22222233444444444
Q ss_pred -CCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEecc-CCeEEECcEEeChHHHHHHHhcCC
Q 030653 92 -AVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGL-KDLVKYKGCQVAPAELEHLLLSHP 165 (174)
Q Consensus 92 -~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~-~d~i~~~G~~v~p~eVE~~l~~~~ 165 (174)
++.|||++ |+++.|||++|+.|+++|..++||+|||+|++ ||+|+|+||+ ||+||++|++|+|.|||++|.+||
T Consensus 350 ~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~~p 429 (505)
T 3nyq_A 350 GESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHP 429 (505)
T ss_dssp SCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHHHHHHHTTST
T ss_pred CCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHHHHHHHHHCc
Confidence 78999999 99999999999999999988999999999999 9999999997 699999999999999999999999
Q ss_pred CcceEEEeC
Q 030653 166 EMVDAAVIP 174 (174)
Q Consensus 166 ~V~~~~Vvg 174 (174)
+|.+|+|+|
T Consensus 430 ~V~~a~Vv~ 438 (505)
T 3nyq_A 430 EVREAAVTG 438 (505)
T ss_dssp TEEEEEEEE
T ss_pred CccEEEEEe
Confidence 999999985
No 18
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=99.95 E-value=2e-29 Score=229.97 Aligned_cols=149 Identities=30% Similarity=0.439 Sum_probs=99.7
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec-------------------cCCccccccc-cc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL-------------------LPSVVSSSLL-IR 85 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~-------------------~~~~~~~~~~-~~ 85 (174)
..+..++.+.+|++.+++++.+.+.+.+|++++++.||+||++.+... .+.......+ ..
T Consensus 341 ~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~ 420 (979)
T 3tsy_A 341 YDLSSIRVVKSGAAPLGKELEDAVNAKFPNAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDT 420 (979)
T ss_dssp SCCTTCCEEEESSCCCCSSHHHHHHHHCTTCEEEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTS
T ss_pred CCccceEEEEEcCCCCCHHHHHHHHHHCCCCeEEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCC
Confidence 346778999999999999999999999999999999999998744221 1222222233 23
Q ss_pred CcccccCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHH
Q 030653 86 TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLL 161 (174)
Q Consensus 86 ~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l 161 (174)
+..++.++.|||++ |++++|||++|+.|++.|+.+|||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|
T Consensus 421 ~~~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l 500 (979)
T 3tsy_A 421 GDSLSRNQPGEICIRGHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALL 500 (979)
T ss_dssp CCBCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEESCC------------------
T ss_pred CCCCCCCCccEEEEECCCccccccCChhhhhhhccCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHHHHHHH
Confidence 56778899999999 99999999999999999988999999999999 999999999999999999999999999999
Q ss_pred hcCCCcceEEEeC
Q 030653 162 LSHPEMVDAAVIP 174 (174)
Q Consensus 162 ~~~~~V~~~~Vvg 174 (174)
.+||+|.+++|+|
T Consensus 501 ~~~p~V~~~~Vv~ 513 (979)
T 3tsy_A 501 IGHPDITDVAVVA 513 (979)
T ss_dssp -------------
T ss_pred HhCCCcceEEEEE
Confidence 9999999999875
No 19
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=99.95 E-value=2.9e-29 Score=216.13 Aligned_cols=147 Identities=20% Similarity=0.331 Sum_probs=125.5
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCC-----CCeEEcCCCCCcceeeee----------------------------
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLP-----TRRLLLPSVLSSSSTCHS---------------------------- 72 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p-----~~~i~~~yg~te~~~~~~---------------------------- 72 (174)
..+..++.+.++++.++++.++++.+.+| +.++++.||+||++.+..
T Consensus 296 ~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 375 (576)
T 3gqw_A 296 LDLSCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPG 375 (576)
T ss_dssp CCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCC
T ss_pred CChhhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccC
Confidence 34677899999999999999999999886 789999999999874332
Q ss_pred --------------ccCCcccccccccCcccccCCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee-CCeE
Q 030653 73 --------------LLPSVVSSSLLIRTLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE-DSFL 135 (174)
Q Consensus 73 --------------~~~~~~~~~~~~~~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~-dG~l 135 (174)
+.+.......+..+..++.++.|||++ |++++|||++++.+++.+ .+|||+|||+|++ ||+|
T Consensus 376 ~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~-~~g~~~TGDl~~~~dG~l 454 (576)
T 3gqw_A 376 AETRAVSTFVNCGKALPEHGIEIRNEAGMPVAERVVGHICISGPSLMSGYFGDQVSQDEIA-ATGWLDTGDLGYLLDGYL 454 (576)
T ss_dssp TTCCCEEEEEBCCEECTTCEEEEECTTSCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHH-HHSCEEEEEEEEEETTEE
T ss_pred ccccCccceeecCCcCCCCeEEEECCCCCCCCCCCeEEEEEeCccccccccCCcccccccc-CCCeeeccceEEEECCEE
Confidence 223333333455666788899999999 999999999998877655 6899999999999 9999
Q ss_pred EEEeccCCeEEECcEEeChHHHHHHHhcCCCcceEEEe
Q 030653 136 FIVDGLKDLVKYKGCQVAPAELEHLLLSHPEMVDAAVI 173 (174)
Q Consensus 136 ~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~V~~~~Vv 173 (174)
+|+||+||+||++|++|+|.|||++|.+||+|.+++|+
T Consensus 455 ~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv 492 (576)
T 3gqw_A 455 YVTGRIKDLIIIRGRNIWPQDIEYIAEQEPEIHSGDAI 492 (576)
T ss_dssp EEEEETTTCEEETTEEECHHHHHHHHTTSSSCCTTSEE
T ss_pred EEEecCcceEEECCEEECHHHHHHHHHhCcccccccEE
Confidence 99999999999999999999999999999999987665
No 20
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=99.95 E-value=8e-29 Score=213.19 Aligned_cols=146 Identities=25% Similarity=0.310 Sum_probs=112.5
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeeccC-------------------------Cccccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLLP-------------------------SVVSSS 81 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~~-------------------------~~~~~~ 81 (174)
.+..++.+.+||+.+++++.+++ +.+ ++++++.||+||++.+..... ......
T Consensus 291 ~l~~lr~i~~gG~~l~~~~~~~~-~~~-g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i 368 (541)
T 1v25_A 291 RLKTLRRLVVGGSAAPRSLIARF-ERM-GVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRV 368 (541)
T ss_dssp CCSSCCEEEECSSCCCHHHHHHH-HHT-TCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEE
T ss_pred cchhccEEEECCCCCCHHHHHHH-HHh-CCceeecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEE
Confidence 45678999999999999999999 554 789999999999875433221 111122
Q ss_pred ccccCccccc--CCcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChH
Q 030653 82 LLIRTLSMWV--AVLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPA 155 (174)
Q Consensus 82 ~~~~~~~~~~--~~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~ 155 (174)
.+.++..++. ++.|||++ |+++.|||++|+.|++.|..+|||+|||+|++ ||+|+|+||+||+||++|++|+|.
T Consensus 369 ~d~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~ 448 (541)
T 1v25_A 369 ADEEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSV 448 (541)
T ss_dssp ECTTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHH
T ss_pred ECCCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHH
Confidence 2334445553 36899999 99999999999999999977999999999999 999999999999999999999999
Q ss_pred HHHHHHhcCCCcceEEEeC
Q 030653 156 ELEHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 156 eVE~~l~~~~~V~~~~Vvg 174 (174)
|||++|.+||+|.+|+|+|
T Consensus 449 eIE~~l~~~p~V~~a~Vv~ 467 (541)
T 1v25_A 449 DLENALMGHPKVKEAAVVA 467 (541)
T ss_dssp HHHCC----------CEEE
T ss_pred HHHHHHHhCCCceEEEEEE
Confidence 9999999999999999974
No 21
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=99.95 E-value=1.5e-28 Score=212.65 Aligned_cols=145 Identities=17% Similarity=0.164 Sum_probs=122.0
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec-----------------cCCcccccccccCccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL-----------------LPSVVSSSLLIRTLSM 89 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~-----------------~~~~~~~~~~~~~~~~ 89 (174)
.+..++.+.++|+.++++..+++++. .++++.||+||++.+... .+.......+..+..+
T Consensus 291 ~~~~lr~~~~gG~~l~~~~~~~~~~~---~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~ 367 (563)
T 1amu_A 291 RILSIQTLITAGSATSPSLVNKWKEK---VTYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDENLQLK 367 (563)
T ss_dssp TCCSCSEEEEESSCCCHHHHHHHTTT---SEEEEEECCGGGSSCSEEEECCSSCCCSSCCCBEECTTEEEEEECTTSCBC
T ss_pred ccccccEEEEEEecCCHHHHHHHHhC---CeEEEEECcCHHhHhheeeecccccCCCCCcccceeCCCEEEEECCCcCCC
Confidence 45678999999999999999988774 789999999998643221 1122222234456677
Q ss_pred ccCCcCeEEe--CcccccccCCcccccccccC------CCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHH
Q 030653 90 WVAVLGSKFV--KLISAGYVGEQEVTSATLLP------DGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEH 159 (174)
Q Consensus 90 ~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~------~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~ 159 (174)
+.++.|||++ |++++|||++|+.|+++|.. ++||+|||+|++ ||+|+|+||+||+||++|++|+|.|||+
T Consensus 368 ~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~ 447 (563)
T 1amu_A 368 SVGEAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVES 447 (563)
T ss_dssp CTTCEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHH
T ss_pred CCCCcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHHHHHH
Confidence 8899999999 99999999999999988842 469999999999 9999999999999999999999999999
Q ss_pred HHhcCCCcceEEEeC
Q 030653 160 LLLSHPEMVDAAVIP 174 (174)
Q Consensus 160 ~l~~~~~V~~~~Vvg 174 (174)
+|.+||+|.+|+|++
T Consensus 448 ~l~~~p~V~~a~Vv~ 462 (563)
T 1amu_A 448 ILLKHMYISETAVSV 462 (563)
T ss_dssp HHTTSTTEEEEEEEE
T ss_pred HHHhCCCcceEEEEE
Confidence 999999999999974
No 22
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=99.95 E-value=4.3e-28 Score=210.13 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=125.1
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeeccC--------------CcccccccccCcccccC
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLLP--------------SVVSSSLLIRTLSMWVA 92 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~~--------------~~~~~~~~~~~~~~~~~ 92 (174)
.+..++.+.++|+.++++.++++++.+ ++++++.||+||++.+....+ .......+.++..++.+
T Consensus 320 ~~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~g~~~~~G 398 (570)
T 3c5e_A 320 KFPHLQNCVTVGESLLPETLENWRAQT-GLDIRESYGQTETGLTCMVSKTMKIKPGYMGTAASCYDVQIIDDKGNVLPPG 398 (570)
T ss_dssp CCTTCCEEEEESSCCCHHHHHHHHHHH-SCCCEEEEEETTTEEEEECCTTSCCCTTCCCEECTTCCEEEECTTSCBCCTT
T ss_pred ccccceEEEEcCCcCCHHHHHHHHHHh-CCchhhccchhhcccceecCcccccCCCcccccCCCceEEEECCCCCCCCCC
Confidence 356789999999999999999999887 688999999999875433221 11222334456677889
Q ss_pred CcCeEEe-------CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhc
Q 030653 93 VLGSKFV-------KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLS 163 (174)
Q Consensus 93 ~~Gel~v-------~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~ 163 (174)
+.|||++ |+++.|||++|+.|++.| .++||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+
T Consensus 399 ~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f-~~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~ 477 (570)
T 3c5e_A 399 TEGDIGIRVKPIRPIGIFSGYVDNPDKTAANI-RGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALME 477 (570)
T ss_dssp CCEEEEEECSSBCCTTCCCEETTCHHHHHHTE-ETTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHHT
T ss_pred CCCeeEEeccCCCCchhhccccCChhHhhhhh-cCCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHHHHHHHHh
Confidence 9999987 478999999999999998 4899999999999 99999999999999999999999999999999
Q ss_pred CCCcceEEEeC
Q 030653 164 HPEMVDAAVIP 174 (174)
Q Consensus 164 ~~~V~~~~Vvg 174 (174)
||+|.+|+|++
T Consensus 478 ~p~V~~a~Vv~ 488 (570)
T 3c5e_A 478 HPAVVETAVIS 488 (570)
T ss_dssp STTEEEEEEEE
T ss_pred CCCcceEEEEe
Confidence 99999999985
No 23
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=99.95 E-value=9.5e-28 Score=210.95 Aligned_cols=148 Identities=14% Similarity=0.111 Sum_probs=124.7
Q ss_pred CccccceEEEccccCChhhHHHHHhhCC--CCeEEcCCCCCcceeeeecc----------------CCcccccccccCcc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLP--TRRLLLPSVLSSSSTCHSLL----------------PSVVSSSLLIRTLS 88 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p--~~~i~~~yg~te~~~~~~~~----------------~~~~~~~~~~~~~~ 88 (174)
.+..++.+.++|+.++++..+.+.+.++ ++.+++.||.||++.+.... +.......+.++..
T Consensus 376 ~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d~~g~~ 455 (652)
T 1pg4_A 376 DRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHP 455 (652)
T ss_dssp CCTTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCB
T ss_pred CcCceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCCcCccCCccccCcCCCeEEEECCCCCC
Confidence 4577899999999999999999999886 48899999999987433221 11112223445667
Q ss_pred cccCCcCeEEe----CcccccccCCccccccccc--CCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHH
Q 030653 89 MWVAVLGSKFV----KLISAGYVGEQEVTSATLL--PDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHL 160 (174)
Q Consensus 89 ~~~~~~Gel~v----~~v~~gY~~~~~~t~~~~~--~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~ 160 (174)
++.++.|||++ |++++|||++++.+.+.+. .+|||+|||+|++ ||+|+|+||+||+||++|+||+|.|||++
T Consensus 456 v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~~ 535 (652)
T 1pg4_A 456 QEGATEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESA 535 (652)
T ss_dssp CCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHH
T ss_pred cCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHH
Confidence 77788999998 4799999999998887763 3789999999999 99999999999999999999999999999
Q ss_pred HhcCCCcceEEEeC
Q 030653 161 LLSHPEMVDAAVIP 174 (174)
Q Consensus 161 l~~~~~V~~~~Vvg 174 (174)
|.+||.|.+|+|+|
T Consensus 536 l~~~p~V~ea~Vvg 549 (652)
T 1pg4_A 536 LVAHPKIAEAAVVG 549 (652)
T ss_dssp HHHSTTEEEEEEEE
T ss_pred HHhCCCcceEEEEE
Confidence 99999999999985
No 24
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=99.95 E-value=2.7e-28 Score=208.97 Aligned_cols=143 Identities=17% Similarity=0.193 Sum_probs=120.5
Q ss_pred ccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeee--------------eccCCcccccccccCcccccCCcC
Q 030653 30 FHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCH--------------SLLPSVVSSSLLIRTLSMWVAVLG 95 (174)
Q Consensus 30 ~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~G 95 (174)
.++.+.++|+.++++..+++++.+ ++++++.||+||++.+. .+.+.......+..+..++.++.|
T Consensus 301 ~lr~~~~gGe~l~~~~~~~~~~~~-g~~i~~~YG~TE~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~~~~~g~~G 379 (529)
T 2v7b_A 301 AIRICTSAGEALPREIGERFTAHF-GCEILDGIGSTEMLHIFLSNRAGAVEYGTTGRPVPGYEIELRDEAGHAVPDGEVG 379 (529)
T ss_dssp CCCEEEECSSCCCHHHHHHHHHHH-SCCEEEEEECTTTSSEEEECCTTCCCTTSCCEECTTCEEEEECTTSCBCCTTSCE
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHh-CCceeeeEchhhcCceeeccccCCCccCCcccCCCCCEEEEECCCCCCCCCCCcc
Confidence 688999999999999999999987 68899999999985332 222232333345556678889999
Q ss_pred eEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCCcceEE
Q 030653 96 SKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPEMVDAA 171 (174)
Q Consensus 96 el~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~V~~~~ 171 (174)
||++ |+++.|||++++.|++.|. ++||+|||+|++ ||+|+|+||+||+||++|++|+|.|||++|.+||+|.+++
T Consensus 380 El~v~g~~~~~gY~~~~~~t~~~f~-~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~ 458 (529)
T 2v7b_A 380 DLYIKGPSAAVMYWNNREKSRATFL-GEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVLVQHDAVLEAA 458 (529)
T ss_dssp EEEEECTTCCCCBTTCHHHHHHHEE-TTEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHHHHHHHTTSTTEEEEE
T ss_pred EEEEecCCcccccCCChHHHHHhhh-cCCcccCceEEECCCccEEEeCccCCeEEECCEEECHHHHHHHHHhCCCcceEE
Confidence 9999 9999999999999999984 899999999999 9999999999999999999999999999999999999999
Q ss_pred EeC
Q 030653 172 VIP 174 (174)
Q Consensus 172 Vvg 174 (174)
|+|
T Consensus 459 vv~ 461 (529)
T 2v7b_A 459 VVG 461 (529)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 25
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=99.95 E-value=7.4e-28 Score=225.15 Aligned_cols=147 Identities=20% Similarity=0.225 Sum_probs=125.6
Q ss_pred ccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeec------------------cCCcccccccccCccc
Q 030653 28 LAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSL------------------LPSVVSSSLLIRTLSM 89 (174)
Q Consensus 28 ~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~------------------~~~~~~~~~~~~~~~~ 89 (174)
+..++.+.+||+.++++.++++.+.+|+.++++.||.||++.+... .++....+.+..+..+
T Consensus 719 ~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~ 798 (1304)
T 2vsq_A 719 MKGLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQ 798 (1304)
T ss_dssp HHTCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBC
T ss_pred CCCccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCC
Confidence 4568999999999999999999999999999999999998743211 1111112224455677
Q ss_pred ccCCcCeEEe--CcccccccCCccccccccc------CCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHH
Q 030653 90 WVAVLGSKFV--KLISAGYVGEQEVTSATLL------PDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEH 159 (174)
Q Consensus 90 ~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~------~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~ 159 (174)
+.|+.|||++ |++++||+++|+.|+++|. +++||+|||+|++ ||+|+|+||+||+||++|+||+|.|||+
T Consensus 799 p~G~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eIE~ 878 (1304)
T 2vsq_A 799 PFGAVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEK 878 (1304)
T ss_dssp CTTCCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHH
T ss_pred CCCCceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHHHH
Confidence 8899999999 9999999999999999984 2459999999999 9999999999999999999999999999
Q ss_pred HHhcCCCcceEEEeC
Q 030653 160 LLLSHPEMVDAAVIP 174 (174)
Q Consensus 160 ~l~~~~~V~~~~Vvg 174 (174)
+|.+||+|.+|+|++
T Consensus 879 ~l~~~p~V~~a~V~~ 893 (1304)
T 2vsq_A 879 QLQEYPGVKDAVVVA 893 (1304)
T ss_dssp HHHHSSSCCEEEEEE
T ss_pred HHHhCCCCceEEEEE
Confidence 999999999999874
No 26
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=99.94 E-value=2.2e-28 Score=208.59 Aligned_cols=145 Identities=24% Similarity=0.284 Sum_probs=92.8
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeee-------------ccCCcccccccccCcccccC
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHS-------------LLPSVVSSSLLIRTLSMWVA 92 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~-------------~~~~~~~~~~~~~~~~~~~~ 92 (174)
..+..++.+..++.. ...+++.+.+|++++++.||+||++.+.. +.+.......+.++..++.+
T Consensus 269 ~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g 345 (509)
T 3ivr_A 269 AQLASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYRDRPKSAGRPLFWRTVAVVDAEDRPLPPG 345 (509)
T ss_dssp GGGTTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGGGSTTSCCEECTTCEEEEECTTSCBCCTT
T ss_pred cchhhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCccccCCCcccccCCCcEEEEECCCCCCCCCC
Confidence 345667888877765 88999999999999999999999875432 22233333445567788889
Q ss_pred CcCeEEe--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEecc--CCeEEECcEEeChHHHHHHHhcCCC
Q 030653 93 VLGSKFV--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGL--KDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 93 ~~Gel~v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~--~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
+.|||++ |+++.|||++|+.|++.| .+|||+|||+|++ ||+++|+||+ +|+||++|++|+|.|||++|.+||+
T Consensus 346 ~~GEl~v~g~~~~~gY~~~~~~t~~~f-~~g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~~~p~ 424 (509)
T 3ivr_A 346 EVGEIVLRGPTVFKGYWNNAAATQHAF-RNGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAEVEGALKQHPA 424 (509)
T ss_dssp CCEEEEEESTTSCCEETTCHHHHHHHT-GGGSEEEEEEEEECTTSCEEEEEEC---------------------------
T ss_pred CceEEEEecCCccccccCCHHHhHHHh-hcCCcccccEEEECCCceEEEeCCCCcceeEEECCEEECHHHHHHHHHhCCC
Confidence 9999999 999999999999999999 4899999999999 9999999999 9999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+|+|+|
T Consensus 425 V~~a~vv~ 432 (509)
T 3ivr_A 425 IADAVVIG 432 (509)
T ss_dssp --------
T ss_pred ceeEEEEe
Confidence 99999985
No 27
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=99.94 E-value=2.1e-27 Score=204.76 Aligned_cols=147 Identities=15% Similarity=0.167 Sum_probs=90.3
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeee---------------eccCCccccccc-ccCccc
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCH---------------SLLPSVVSSSLL-IRTLSM 89 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~---------------~~~~~~~~~~~~-~~~~~~ 89 (174)
..+..++.+.+|++.++++..+.+++ .+++.+++.||+||++... .+.+.......+ ..+..+
T Consensus 291 ~~~~~lr~~~~gG~~l~~~~~~~~~~-~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~ 369 (562)
T 3ite_A 291 EDAPHLVYLGVGGEKMTPRTQQIWSS-SDRVALVNVYGPTEVTIGCSAGRILPDSDTRCIGHPLGDSVAHVLAPGSNEHV 369 (562)
T ss_dssp GGSTTCCEEEEESSCCCHHHHHHHTT-CSSCEEEEEECCGGGCSCSEEEECCTTSCTTEEEEECTTCEEEEECTTSSCBC
T ss_pred cccCceEEEEEecCCCCHHHHHHHhh-CCCcEEEEeeccchheeeeeeeeecCCCCCccccccCCCCeEEEEeCCCCCCC
Confidence 34567899999999999999999887 4578999999999986322 122222222233 234467
Q ss_pred ccCCcCeEEe--CcccccccCCccccccccc-CCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcC
Q 030653 90 WVAVLGSKFV--KLISAGYVGEQEVTSATLL-PDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSH 164 (174)
Q Consensus 90 ~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~-~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~ 164 (174)
+.++.|||++ |++++|||++|+.|+..+. .++||+|||+|++ ||+|+|+||+||+||++|+||+|.|||++|.+|
T Consensus 370 ~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~ 449 (562)
T 3ite_A 370 KKGMAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGEVSEVIRSL 449 (562)
T ss_dssp CTTSCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEEEEECTTSCEEEEEEC-----------------------
T ss_pred CCCCceEEEEeccccchhhCCCccccccccCCCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHHHHHHHHhc
Confidence 8899999999 9999999999998887652 2349999999999 999999999999999999999999999999998
Q ss_pred -CCcceEEEe
Q 030653 165 -PEMVDAAVI 173 (174)
Q Consensus 165 -~~V~~~~Vv 173 (174)
|.+.+++|+
T Consensus 450 ~~~~~~~~v~ 459 (562)
T 3ite_A 450 SPTDIDVVTL 459 (562)
T ss_dssp ----------
T ss_pred CCCceeEEEE
Confidence 777777765
No 28
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=99.94 E-value=5.1e-27 Score=206.81 Aligned_cols=148 Identities=16% Similarity=0.137 Sum_probs=123.6
Q ss_pred CccccceEEEccccCChhhHHHHHhhCC--CCeEEcCCCCCcceeeeecc-----------------CCcccccccc-cC
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLP--TRRLLLPSVLSSSSTCHSLL-----------------PSVVSSSLLI-RT 86 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p--~~~i~~~yg~te~~~~~~~~-----------------~~~~~~~~~~-~~ 86 (174)
.+..++.+.++|++++++..+.+.+.++ ++.+++.||.||++.+.... +.....+.+. .+
T Consensus 382 ~l~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g 461 (663)
T 1ry2_A 382 SLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGVTPMKPGSASFPFFGIDAVVLDPNTG 461 (663)
T ss_dssp CCTTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTCCCCCTTCCCEECTTCCEEEECSSST
T ss_pred CcCceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCccccCeeeccCCCCCcccCCCccccCcCCCeEEEEcCCCC
Confidence 4577899999999999999999999885 48999999999987432211 1111122233 45
Q ss_pred ccccc-CCcCeEEe----CcccccccCCccccccccc--CCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHH
Q 030653 87 LSMWV-AVLGSKFV----KLISAGYVGEQEVTSATLL--PDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAEL 157 (174)
Q Consensus 87 ~~~~~-~~~Gel~v----~~v~~gY~~~~~~t~~~~~--~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eV 157 (174)
..++. ++.|||++ |++++|||++++.+.+.|. .+|||+|||+|++ ||+|+|+||+||+||++|+||+|.||
T Consensus 462 ~~v~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eI 541 (663)
T 1ry2_A 462 EELNTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEI 541 (663)
T ss_dssp TCEECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHH
T ss_pred CcCCCCCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHH
Confidence 56666 78899998 4799999999999888774 3789999999999 99999999999999999999999999
Q ss_pred HHHHhcCCCcceEEEeC
Q 030653 158 EHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 158 E~~l~~~~~V~~~~Vvg 174 (174)
|++|.+||.|.+|+|+|
T Consensus 542 E~~l~~~p~V~ea~Vvg 558 (663)
T 1ry2_A 542 EAAIIEDPIVAECAVVG 558 (663)
T ss_dssp HHHHHSSTTEEEEEEEC
T ss_pred HHHHHhCCCcceEEEEE
Confidence 99999999999999986
No 29
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=99.93 E-value=1.4e-27 Score=206.45 Aligned_cols=149 Identities=16% Similarity=0.159 Sum_probs=122.0
Q ss_pred CCccccceEEEccccCChhhHHHHHhhCC-----CCeEEcCCCCCcceeeeeccCC------------------------
Q 030653 26 NSLAFHSQIRTKSQMAEVRHHRPIPHTLP-----TRRLLLPSVLSSSSTCHSLLPS------------------------ 76 (174)
Q Consensus 26 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~p-----~~~i~~~yg~te~~~~~~~~~~------------------------ 76 (174)
..+..++.+.++++.+++++++++.+.++ +.++++.||+||++.+....+.
T Consensus 286 ~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (590)
T 3kxw_A 286 LDLSSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADD 365 (590)
T ss_dssp CCCTTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCT
T ss_pred CCchhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccC
Confidence 35677899999999999999999998874 5689999999998754332110
Q ss_pred ---------------ccccccccc-CcccccCCcCeEEe--CcccccccCCcccccccccC------CC--eEecCCeee
Q 030653 77 ---------------VVSSSLLIR-TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLLP------DG--WMRTGDLCY 130 (174)
Q Consensus 77 ---------------~~~~~~~~~-~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~~------~g--~~~TGD~g~ 130 (174)
......+.+ +..++.++.|||++ |+++.|||++|+.|+++|.. +| ||+|||+|+
T Consensus 366 ~~~~~~~~~~~G~p~~~v~i~d~~~~~~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~ 445 (590)
T 3kxw_A 366 NSPGSYKLVSSGNPIQEVKIIDPDTLIPCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGF 445 (590)
T ss_dssp TCTTCEEEECCCEESSEEEEECTTTCCBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEE
T ss_pred CCCCcceEeccCCCCCCeEEEcCCCCcCCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEE
Confidence 001112223 45677889999999 99999999999999999843 24 999999999
Q ss_pred e-CCeEEEEeccCCeEEECcEEeChHHHHHHH-hcCCCcc--eEEEeC
Q 030653 131 E-DSFLFIVDGLKDLVKYKGCQVAPAELEHLL-LSHPEMV--DAAVIP 174 (174)
Q Consensus 131 ~-dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l-~~~~~V~--~~~Vvg 174 (174)
+ ||+|+|+||+||+||++|+||+|.|||++| ..+|.|. +|+|++
T Consensus 446 ~ddG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~v~~~~~~v~~ 493 (590)
T 3kxw_A 446 LHENELYVTGRIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFV 493 (590)
T ss_dssp EETTEEEEEEESSCHHHHHHHTTHHHHHHHHHHHSGGGGGEEEEEEEE
T ss_pred EECCEEEEEcCccceEEECCEecCHHHHHHHHHhcCccccCccEEEEE
Confidence 9 999999999999999999999999999999 8899998 788764
No 30
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=99.93 E-value=1.8e-26 Score=196.38 Aligned_cols=141 Identities=14% Similarity=0.182 Sum_probs=114.6
Q ss_pred ccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeeccCCcc-----cccc-cccCcc-----cccCCcCeEE
Q 030653 30 FHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLLPSVV-----SSSL-LIRTLS-----MWVAVLGSKF 98 (174)
Q Consensus 30 ~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~~~~~-----~~~~-~~~~~~-----~~~~~~Gel~ 98 (174)
.++.+.++|+.++++..+.+.+. ++++++.||+||++.......... .... +..+.+ ...++.|||+
T Consensus 275 ~lr~i~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~GEl~ 352 (501)
T 3ipl_A 275 NLQKILLGGAKLSATMIETALQY--NLPIYNSFGMTETCSQFLTATPEMLHARPDTVGMPSANVDVKIKNPNKEGHGELM 352 (501)
T ss_dssp TCCEEEECSSCCCHHHHHHHHHT--TCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCBEECTTCEEEEESCCSSCCEEEE
T ss_pred cccEEEEeCCCCCHHHHHHHHHh--CCCEeccccccccccceeecCccccccCCCCCCCCCCCcEEEEecCCCCCccEEE
Confidence 68899999999999999999873 789999999999865332211110 0000 111111 1135679999
Q ss_pred e--CcccccccCCcccccccccCCCeEecCCeeee--CCeEEEEeccCCeEEECcEEeChHHHHHHHhcCCCcceEEEeC
Q 030653 99 V--KLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DSFLFIVDGLKDLVKYKGCQVAPAELEHLLLSHPEMVDAAVIP 174 (174)
Q Consensus 99 v--~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~V~~~~Vvg 174 (174)
+ |.+++|||++++.|.. + .+|||+|||+|++ ||+++|+||.||+||++|++|+|.|||++|.+||+|.+++|+|
T Consensus 353 v~g~~~~~gY~~~~~~t~~-~-~~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~~p~V~~~~vv~ 430 (501)
T 3ipl_A 353 IKGANVMNGYLYPTDLTGT-F-ENGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVG 430 (501)
T ss_dssp EESTTSCSCCSBSTTCCCS-E-ETTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHHHHHHHTTSTTEEEEEEEE
T ss_pred EeccchhhhhCcChhhcch-h-cCCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHHHHHHHHhCCCccEEEEEE
Confidence 9 9999999999998887 5 6899999999999 9999999999999999999999999999999999999999985
No 31
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.87 E-value=1.7e-22 Score=169.19 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=108.2
Q ss_pred ccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcc-ee-eeecc----------CCccccccc-ccCcccccCCc
Q 030653 28 LAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSS-ST-CHSLL----------PSVVSSSLL-IRTLSMWVAVL 94 (174)
Q Consensus 28 ~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~-~~-~~~~~----------~~~~~~~~~-~~~~~~~~~~~ 94 (174)
+..++.+.+||+.+++++.+.+++.| ++++++.||+||+ +. +.... +.......+ ..+..++.++.
T Consensus 205 ~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~g~~~~~~~~~v~i~d~~~g~~~~~g~~ 283 (436)
T 3qov_A 205 ETTLKTLVIGAEPHTDEQRRKIERML-NVKAYNSFGMTEMNGPGVAFECQEQNGMHFWEDCYLVEIIDPETGEPVPEGEI 283 (436)
T ss_dssp SSSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEEEGGGTEEEEEEECTTCSSEEECTTTEEEEEECTTTCSBCSTTCC
T ss_pred cCCccEEEEeCCcCCHHHHHHHHHHh-CccEEecCcchhhcCCeeEEecCCCCeeEEccCceEEEEEECCCCCCCCCCCc
Confidence 46789999999999999999999988 7899999999998 43 21111 111122234 45667788999
Q ss_pred CeEEeCcccccccCCcccccccccCCCeEecCCeeee--CC------e---EEEEeccCCeEEECcEEeChHHHHHHHhc
Q 030653 95 GSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--DS------F---LFIVDGLKDLVKYKGCQVAPAELEHLLLS 163 (174)
Q Consensus 95 Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--dG------~---l~~~GR~~d~i~~~G~~v~p~eVE~~l~~ 163 (174)
|||++.+ .+...+ .++||+|||+|++ || + ++|+||.||+||++|++|+|.+||++|.+
T Consensus 284 Gel~v~~----------~~~~~~-~~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~ 352 (436)
T 3qov_A 284 GELVLTT----------LDREMM-PLIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQ 352 (436)
T ss_dssp EEEEEEE----------SSCCSS-CCCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTT
T ss_pred eEEEEec----------cCcCCc-eEEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHHHh
Confidence 9999743 233344 5789999999999 66 4 69999999999999999999999999999
Q ss_pred CCCcceEEEeC
Q 030653 164 HPEMVDAAVIP 174 (174)
Q Consensus 164 ~~~V~~~~Vvg 174 (174)
||+|.+++|++
T Consensus 353 ~p~v~~~~vv~ 363 (436)
T 3qov_A 353 FPELGSNYLIT 363 (436)
T ss_dssp CTTEEEEEEEE
T ss_pred CcCcCCcEEEE
Confidence 99999998874
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.86 E-value=5.6e-22 Score=163.03 Aligned_cols=132 Identities=8% Similarity=0.042 Sum_probs=103.0
Q ss_pred CccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcceeeeeccCCcccccccccCcccccCCcCeEEe--Ccccc
Q 030653 27 SLAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSSSTCHSLLPSVVSSSLLIRTLSMWVAVLGSKFV--KLISA 104 (174)
Q Consensus 27 ~~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gel~v--~~v~~ 104 (174)
.+..++.+.+||+.+++++.+++++. ++++++.||+||++......+. +....|++.+ |++..
T Consensus 146 ~l~~lr~v~~gG~~l~~~~~~~~~~~--~~~~~~~YG~TEt~~~~~~~~~-------------~~~~~g~~~~~~pgv~~ 210 (358)
T 4gs5_A 146 QVDRLGKVLLGGAPVNHALAMQISDL--AMPVYQSYGMTETVSHVALKAL-------------NGPEASELYVFLPGIQY 210 (358)
T ss_dssp GGGGGCSEEECSSCCCHHHHHHHHTC--SSCEEEEEECGGGSSEEEEEEC-------------SSTTCCSCEEECTTCEE
T ss_pred cCCcceEEEEcccCCCchheeccccc--CceEEeccccccccceeecccc-------------cccccceeeccCCCeEE
Confidence 45678999999999999999999873 7899999999998754433221 1123455555 77777
Q ss_pred cccCCcccccc-cccCCCeEecCCeeee-CCeEEEEeccCCeEEECcEEeChHHHHHHH---hcCCCcceEEEe
Q 030653 105 GYVGEQEVTSA-TLLPDGWMRTGDLCYE-DSFLFIVDGLKDLVKYKGCQVAPAELEHLL---LSHPEMVDAAVI 173 (174)
Q Consensus 105 gY~~~~~~t~~-~~~~~g~~~TGD~g~~-dG~l~~~GR~~d~i~~~G~~v~p~eVE~~l---~~~~~V~~~~Vv 173 (174)
+|.++.+.... .+..+|||+|||+|++ ++.++|+||+||+||++|+||+|.|||++| ..||.|.+++|+
T Consensus 211 ~~~~~Gel~~~g~~~~~g~~~TGDlg~~d~~g~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V~~a~vv 284 (358)
T 4gs5_A 211 GVDERGCLHISGAVTNGQTVQTNDLVEIHGNAFQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNIGNAFFC 284 (358)
T ss_dssp EECTTSEEEEESGGGTTCCEEEEEEEEECSSEEEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred EecCcCceEEecccccCcceecCCccccccCceEEcccccCeEEECCEEECHHHHHHHHHHhccCCCccEEEEE
Confidence 77776664433 3456899999999999 445778899999999999999999999877 468999998876
No 33
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.84 E-value=2.1e-21 Score=162.87 Aligned_cols=135 Identities=13% Similarity=0.035 Sum_probs=106.6
Q ss_pred ccccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcc-ee-eeeccC-C----------ccccccc-ccCcccccCC
Q 030653 28 LAFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSS-ST-CHSLLP-S----------VVSSSLL-IRTLSMWVAV 93 (174)
Q Consensus 28 ~~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~-~~-~~~~~~-~----------~~~~~~~-~~~~~~~~~~ 93 (174)
+..++.+.+||+.+++++.+.+.+.+ ++++++.||+||+ +. +....+ . ......+ ..+..++.++
T Consensus 211 ~~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG~TE~~g~~~~~~~~~~~~g~~~~~~~~~~~i~d~~~g~~~~~G~ 289 (443)
T 2y4o_A 211 ESSLKIGIFGAEPWTQALRNEVETRV-GIDALDIYGLSEVMGPGVACECVETKDGPVIWEDHFYPEIIDPVTGEVLPDGS 289 (443)
T ss_dssp GSSCCEEEEESSCCCHHHHHHHHHHH-TCEEEEEEEETTTTEEEEEEECTTTCCSEEECTTTEEEEEECTTTCCBCCTTC
T ss_pred cCCceEEEECCCcCCHHHHHHHHHHh-CcCEEeccCchhhcCCeEEeccCCCCCceEEccCCeEEEEEcCCCCCCCCCCC
Confidence 35688999999999999999999988 7899999999996 43 222111 1 1111223 2356777889
Q ss_pred cCeEEeCcccccccCCcccccccccCCCeEecCCeeee--C-CeE-----EEEeccCCeEEECcEEeChHHHHHHHhcCC
Q 030653 94 LGSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE--D-SFL-----FIVDGLKDLVKYKGCQVAPAELEHLLLSHP 165 (174)
Q Consensus 94 ~Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~--d-G~l-----~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~ 165 (174)
.|||++.+ .+++.+ ..+||+|||+|++ | |++ +|+||.||+||++|++|+|.+||++|.+||
T Consensus 290 ~Gel~v~~----------~t~~~~-p~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p 358 (443)
T 2y4o_A 290 QGELVFTS----------LTKEAM-PVIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALP 358 (443)
T ss_dssp CEEEEEEE----------SSCSSS-CCSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHTST
T ss_pred ceEEEEeC----------CCcccC-hhheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHhCc
Confidence 99999743 233344 5789999999999 6 987 899999999999999999999999999999
Q ss_pred CcceEEEeC
Q 030653 166 EMVDAAVIP 174 (174)
Q Consensus 166 ~V~~~~Vvg 174 (174)
+|.+++|++
T Consensus 359 ~V~~~~vv~ 367 (443)
T 2y4o_A 359 LLSGQFQIT 367 (443)
T ss_dssp TEEEEEEEE
T ss_pred CcCccEEEE
Confidence 999888763
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.83 E-value=4.4e-21 Score=160.64 Aligned_cols=134 Identities=16% Similarity=0.022 Sum_probs=105.4
Q ss_pred cccceEEEccccCChhhHHHHHhhCCCCeEEcCCCCCcc-ee-eeeccCC-c----------cccccc-ccCcccccCCc
Q 030653 29 AFHSQIRTKSQMAEVRHHRPIPHTLPTRRLLLPSVLSSS-ST-CHSLLPS-V----------VSSSLL-IRTLSMWVAVL 94 (174)
Q Consensus 29 ~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~~~yg~te~-~~-~~~~~~~-~----------~~~~~~-~~~~~~~~~~~ 94 (174)
..++.+.+||+.+++++.+.+.+.+ ++++++.||+||+ +. +....+. . .....+ ..+..++.++.
T Consensus 210 ~~lr~i~~gGe~l~~~~~~~~~~~~-g~~v~~~YG~TE~~g~~~~~~~~~~~~g~~~~~~~~~~~i~d~~~g~~~~~g~~ 288 (437)
T 2y27_A 210 SSLRIGIFGAEPWTNDMRVAIEQRM-GIDAVDIYGLSEVMGPGVASECVETKDGPTIWEDHFYPEIIDPETGEVLPDGEL 288 (437)
T ss_dssp SSCCEEEEESSCCCHHHHHHHHHHH-TSEEEEEEEETTTTEEEEEECCTTTCSSCEECTTTEEEEEECTTTCCBCCTTCC
T ss_pred CCeeEEEEcCccCCHHHHHHHHHHH-CcCEEecCCchhhcCCeeEEecCCCCCceeEccCceEEEEEcCCCCCCCCCCCc
Confidence 5688999999999999999999888 7899999999997 44 2221111 1 111123 23557778899
Q ss_pred CeEEeCcccccccCCcccccccccCCCeEecCCeeee-C--CeE-----EEEeccCCeEEECcEEeChHHHHHHHhcCCC
Q 030653 95 GSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE-D--SFL-----FIVDGLKDLVKYKGCQVAPAELEHLLLSHPE 166 (174)
Q Consensus 95 Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~-d--G~l-----~~~GR~~d~i~~~G~~v~p~eVE~~l~~~~~ 166 (174)
|||++.+ .+++.+ .++||+|||+|++ + |++ +|+||.||+||++|++|+|.+||++|.+||+
T Consensus 289 Gel~v~~----------~t~~~~-~~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~ 357 (437)
T 2y27_A 289 GELVFTS----------LTKEAL-PIIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQRA 357 (437)
T ss_dssp EEEEEEE----------SSCSSS-CCCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCTT
T ss_pred cEEEEec----------CCcCCc-hhheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHhCcC
Confidence 9999743 233444 5789999999999 3 885 8999999999999999999999999999999
Q ss_pred cceEEEeC
Q 030653 167 MVDAAVIP 174 (174)
Q Consensus 167 V~~~~Vvg 174 (174)
|.+++|++
T Consensus 358 V~~~~vv~ 365 (437)
T 2y27_A 358 LAPHYQIV 365 (437)
T ss_dssp BCSCCEEE
T ss_pred cCccEEEE
Confidence 98887653
No 35
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=99.79 E-value=7e-20 Score=154.32 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=93.8
Q ss_pred cCCccccceEEEccccCChhhHHHHHhhC-----CCCeEEcCCCCCcceeeeeccCC-----------------------
Q 030653 25 SNSLAFHSQIRTKSQMAEVRHHRPIPHTL-----PTRRLLLPSVLSSSSTCHSLLPS----------------------- 76 (174)
Q Consensus 25 ~~~~~~~~~i~~~~~~~~~~~~~~l~~~~-----p~~~i~~~yg~te~~~~~~~~~~----------------------- 76 (174)
...+..++.+.++++.+++++++++++.+ |++++++.||+||++.+......
T Consensus 307 ~~~l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 386 (480)
T 3t5a_A 307 GRDLGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCA 386 (480)
T ss_dssp TCCCTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCC
T ss_pred ccchhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecC
Confidence 34567899999999999999999999998 67789999999998754432211
Q ss_pred ---------------ccccccccc-CcccccCCcCeEEe--CcccccccCCccccccccc-----------CCCeEecCC
Q 030653 77 ---------------VVSSSLLIR-TLSMWVAVLGSKFV--KLISAGYVGEQEVTSATLL-----------PDGWMRTGD 127 (174)
Q Consensus 77 ---------------~~~~~~~~~-~~~~~~~~~Gel~v--~~v~~gY~~~~~~t~~~~~-----------~~g~~~TGD 127 (174)
....+++.+ +..++.++.|||++ |++++|||++|+.|+++|. .+|||+|||
T Consensus 387 ~~~~~~~~~~G~p~~~~~~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGD 466 (480)
T 3t5a_A 387 GGGATSLISYMLPRSPIVRIVDSDTCIECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGD 466 (480)
T ss_dssp SSSCEEEECEECCSSSEEEEEETTTTEECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEE
T ss_pred CCCcceeeecCcccCCEEEEEcCCCCcCCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccc
Confidence 111222323 46778899999999 9999999999999999984 467999999
Q ss_pred eeee-CCeEEEEec
Q 030653 128 LCYE-DSFLFIVDG 140 (174)
Q Consensus 128 ~g~~-dG~l~~~GR 140 (174)
+|++ ||+|+|+||
T Consensus 467 lg~~ddG~l~~~GR 480 (480)
T 3t5a_A 467 SGFVTDGKMFIIGR 480 (480)
T ss_dssp EEEEETTEEEECC-
T ss_pred eeeEECCEEEEeCC
Confidence 9999 999999998
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=98.73 E-value=3.2e-09 Score=86.57 Aligned_cols=111 Identities=11% Similarity=-0.030 Sum_probs=68.5
Q ss_pred ccccceEEEccccCChhhHHHHH-hhCCCCeEEcCCCCCcceeeeeccC---------------Ccccccccc-cCcccc
Q 030653 28 LAFHSQIRTKSQMAEVRHHRPIP-HTLPTRRLLLPSVLSSSSTCHSLLP---------------SVVSSSLLI-RTLSMW 90 (174)
Q Consensus 28 ~~~~~~i~~~~~~~~~~~~~~l~-~~~p~~~i~~~yg~te~~~~~~~~~---------------~~~~~~~~~-~~~~~~ 90 (174)
+..++.+.+||+.++++..+++. +.||++++++.||+||++.+....+ .....+++. .+..++
T Consensus 230 ~~~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~~~~G~~~~~~~~~~~~~v~ivD~~~g~~vp 309 (369)
T 3hgu_A 230 KQSLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLITSESQQVIYDSFSPFITYDVVDSITAQTVE 309 (369)
T ss_dssp HHHCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCBCTTCSSCEEECCTTTEEEEEECTTTCSBCC
T ss_pred cCCeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceeccccccCCCcccccCCCCCeEEEEECCCCCcCCC
Confidence 45688999999999999999999 9999999999999999875433222 212223343 566778
Q ss_pred cCCcCeEEeCcccccccCCcccccccccCCCeEecCCeeee----CC-------eEEEEeccCCeEEECcE
Q 030653 91 VAVLGSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE----DS-------FLFIVDGLKDLVKYKGC 150 (174)
Q Consensus 91 ~~~~Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~----dG-------~l~~~GR~~d~i~~~G~ 150 (174)
.|+.|||++.++.+. .+ --.|+|||++.. +| .+..++|.++..++.|.
T Consensus 310 ~G~~GEl~vt~l~~~----------~~--l~ry~tgD~~~~~~~~~g~~~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 310 YGERGNVIVTHLSPW----------AF--YPRVAERDTAIRLPGVSGFAGDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp TTCEEEEEEEEEETT----------EE--EEEEEEEEEEEEECCSTTCSSCEEEEEEECC-----------
T ss_pred CCCceEEEEEEcCcc----------cc--cccccCCceEEEecCCCCCcCcccccceeccccCCCceeeec
Confidence 899999997332211 11 123667777665 22 25556777878877764
No 37
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.31 E-value=7.3e-07 Score=77.69 Aligned_cols=116 Identities=16% Similarity=0.026 Sum_probs=75.6
Q ss_pred cccceEEEccccCChhhHHHHHhhCCCCeEE-cCCCCCcceeeeecc-CC----cc----------ccccccc-------
Q 030653 29 AFHSQIRTKSQMAEVRHHRPIPHTLPTRRLL-LPSVLSSSSTCHSLL-PS----VV----------SSSLLIR------- 85 (174)
Q Consensus 29 ~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~-~~yg~te~~~~~~~~-~~----~~----------~~~~~~~------- 85 (174)
.++.-+.+|+. ...++.|+..+++..++ ..|++||+- ++... |. .. ..-++.+
T Consensus 305 k~l~~~~tG~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p~~~p~~~~~~L~p~~~ffEFIP~~~~~~~~~ 380 (609)
T 4b2g_A 305 KYLDVIVTGAM---AQYIPTLDYYSGGLPLACTMYASSECY-FGLNLNPMSKPSEVSYTIMPNMAYFEFLPHEHSSIPLS 380 (609)
T ss_dssp CEEEEECSGGG---GGGHHHHHHHHTSCCEECCEEECSSCE-EEECSCTTSCGGGCCEEECTTSCEEEEEEGGGTTSCCC
T ss_pred cEEEEEccCCh---HHHHHHHHHHcCCCccccCccccccee-eeeecCCCCCcccCceeecCCcEEEEEEeccccccccc
Confidence 34566677763 55667777777777776 899999974 33221 21 00 0001100
Q ss_pred ---------CcccccCCcCeEEeCcccccccCCcccccccccCCCeEecCCeeee-C-----CeEEEEeccCCeEEECcE
Q 030653 86 ---------TLSMWVAVLGSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE-D-----SFLFIVDGLKDLVKYKGC 150 (174)
Q Consensus 86 ---------~~~~~~~~~Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~-d-----G~l~~~GR~~d~i~~~G~ 150 (174)
-.++..|..+||++.+. .|.|. |++||++++ . .++.|+||.++++++.|+
T Consensus 381 ~~~~~~~v~l~eVe~G~~YelViTt~-~GL~R--------------Yr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Ge 445 (609)
T 4b2g_A 381 RDSPPRLVDLAHVEVGKEYELVITTY-AGLYR--------------YRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSD 445 (609)
T ss_dssp SSSCCCCEEGGGCCTTCEEEEEEECT-TSCCS--------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSC
T ss_pred cCCCCccccHhHcCCCCeEEEehhhh-hhhhh--------------eecCCEEEEeecCCCCcEEEEEEecCCeEEcccc
Confidence 12344455566655221 23332 899999998 3 469999999999999999
Q ss_pred EeChHHHHHHHhc
Q 030653 151 QVAPAELEHLLLS 163 (174)
Q Consensus 151 ~v~p~eVE~~l~~ 163 (174)
++++.+||+++.+
T Consensus 446 ki~~~~v~~av~~ 458 (609)
T 4b2g_A 446 KTDEAELQKAVDN 458 (609)
T ss_dssp CBCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 9999999999884
No 38
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.26 E-value=1.6e-06 Score=75.35 Aligned_cols=117 Identities=13% Similarity=0.010 Sum_probs=76.2
Q ss_pred cccceEEEccccCChhhHHHHHhhCCCCeEE-cCCCCCcceeeeec-cCC----cc---------c-ccccc--------
Q 030653 29 AFHSQIRTKSQMAEVRHHRPIPHTLPTRRLL-LPSVLSSSSTCHSL-LPS----VV---------S-SSLLI-------- 84 (174)
Q Consensus 29 ~~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~-~~yg~te~~~~~~~-~~~----~~---------~-~~~~~-------- 84 (174)
.++.-+.+|+. ...++.|++.+++..++ ..|++||+- ++.. .|. .. - .-++.
T Consensus 300 ~~l~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p~~~~~~~~~~L~~~~~ffEFip~~~~~~~~~ 375 (581)
T 4eql_A 300 KYIETVVTGSM---GQYVPMLNYYCNDLPLVSTTYGSSETT-FGINLDPLCKPEDVSYTFMPNMSYFEFIPMDGGDKNDV 375 (581)
T ss_dssp CEEEEECSGGG---GGGHHHHHHHHTTCCEECCEEECSSCE-EEECSCTTSCGGGCCEEECTTSSEEEEEECSTTCCSSC
T ss_pred cEEEEEcCCCh---HHHHHHHHHHcCCCccccCccccccce-eeeccCCCCCcccCceeecCCcEEEEEEeccccCCCcE
Confidence 34666677772 66667788877888777 899999973 3321 121 00 0 00111
Q ss_pred -cCcccccCCcCeEEeCcccccccCCcccccccccCCCeEecCCeeee------CCeEEEEeccCCeEEECcEEeChHHH
Q 030653 85 -RTLSMWVAVLGSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE------DSFLFIVDGLKDLVKYKGCQVAPAEL 157 (174)
Q Consensus 85 -~~~~~~~~~~Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~------dG~l~~~GR~~d~i~~~G~~v~p~eV 157 (174)
.-.++..|+.+||++.+. .|.| =|++||++++ ..++.|.||.++++++.|+++++.+|
T Consensus 376 v~l~eVe~G~~YelViTt~-~GL~--------------RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v 440 (581)
T 4eql_A 376 VDLEDVKLGCTYEPVVTNF-AGLY--------------RMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDL 440 (581)
T ss_dssp EEGGGCCTTCEEEEEEECS-SSCC--------------SEECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHH
T ss_pred eCHHHcCCCceEEEEEeec-ccee--------------eEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHH
Confidence 112333455555654222 1222 1899999998 23699999999999999999999999
Q ss_pred HHHHhcC
Q 030653 158 EHLLLSH 164 (174)
Q Consensus 158 E~~l~~~ 164 (174)
|+++.+.
T Consensus 441 ~~al~~a 447 (581)
T 4eql_A 441 FKAVSQA 447 (581)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 9999864
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.12 E-value=3.2e-06 Score=73.32 Aligned_cols=115 Identities=13% Similarity=0.004 Sum_probs=74.6
Q ss_pred ccceEEEccccCChhhHHHHHhhCCCCeEE-cCCCCCcceeeeecc-CCccc--------------cccc----------
Q 030653 30 FHSQIRTKSQMAEVRHHRPIPHTLPTRRLL-LPSVLSSSSTCHSLL-PSVVS--------------SSLL---------- 83 (174)
Q Consensus 30 ~~~~i~~~~~~~~~~~~~~l~~~~p~~~i~-~~yg~te~~~~~~~~-~~~~~--------------~~~~---------- 83 (174)
++.-+.+|+. ...++.|++.+++..++ ..|.+||+- ++... |.... .-++
T Consensus 306 ~i~~~~~G~~---~~Y~~~l~~~~g~~p~~~~~Y~ASEg~-~gi~~~p~~~~~~~~~~L~p~~~ffEFiP~~~~~~~~~~ 381 (581)
T 4epl_A 306 YVYGIMTGSM---EPYVPKLRHYAGDLPLVSHDYGSSEGW-IAANVTPRLSPEEATFAVIPNLGYFEFLPVSETGEGEEK 381 (581)
T ss_dssp CEEEECSGGG---GGGHHHHHHHHTTSCEEECCEEETTEE-EEECCCTTSCTTTCCEEECTTSCEEEEEEC-------CC
T ss_pred eEEEEeCCCh---HHHHHHHHHHcCCCccccCceecccee-eeeecCCCCCccccceeecCCcEEEEEEecccccCCCCc
Confidence 3455566643 55667777777888776 899999973 33221 21000 0000
Q ss_pred -ccCcccccCCcCeEEeCcccccccCCcccccccccCCCeEecCCeeee-C-----CeEEEEeccCCeEEECcEEeChHH
Q 030653 84 -IRTLSMWVAVLGSKFVKLISAGYVGEQEVTSATLLPDGWMRTGDLCYE-D-----SFLFIVDGLKDLVKYKGCQVAPAE 156 (174)
Q Consensus 84 -~~~~~~~~~~~Gel~v~~v~~gY~~~~~~t~~~~~~~g~~~TGD~g~~-d-----G~l~~~GR~~d~i~~~G~~v~p~e 156 (174)
+.-.++..|+.+||++.+.. |.| =|++||+.++ + -++.|+||.++++++.|+++++.+
T Consensus 382 ~v~l~eve~G~~YelviTt~~-GL~--------------RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~ 446 (581)
T 4epl_A 382 PVGLTQVKIGEEYEVVITNYA-GLY--------------RYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERD 446 (581)
T ss_dssp CEEGGGCCTTCEEEEEEESTT-SCS--------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHH
T ss_pred eeeHHHcCCCCeEEEEEeecc-cee--------------eEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHH
Confidence 01124445566666652221 222 1899999999 3 469999999999999999999999
Q ss_pred HHHHHhc
Q 030653 157 LEHLLLS 163 (174)
Q Consensus 157 VE~~l~~ 163 (174)
||+++.+
T Consensus 447 v~~al~~ 453 (581)
T 4epl_A 447 LQLSVES 453 (581)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999875
No 40
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=23.84 E-value=60 Score=19.53 Aligned_cols=20 Identities=35% Similarity=0.483 Sum_probs=17.2
Q ss_pred hHHHHHHHhcCCCcceEEEe
Q 030653 154 PAELEHLLLSHPEMVDAAVI 173 (174)
Q Consensus 154 p~eVE~~l~~~~~V~~~~Vv 173 (174)
..++++.|.++|.|.+|..+
T Consensus 15 ~~~~~~~l~~~peV~e~~~v 34 (83)
T 2cvi_A 15 EREVMEKLLAMPEVKEAYVV 34 (83)
T ss_dssp HHHHHHHHHTSTTEEEEEEC
T ss_pred HHHHHHHHhCCCCeeEEEEE
Confidence 47899999999999998754
No 41
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=22.54 E-value=63 Score=18.35 Aligned_cols=19 Identities=21% Similarity=0.296 Sum_probs=15.8
Q ss_pred hHHHHHHHhcCCCcceEEE
Q 030653 154 PAELEHLLLSHPEMVDAAV 172 (174)
Q Consensus 154 p~eVE~~l~~~~~V~~~~V 172 (174)
...||++|.++++|.++.|
T Consensus 17 ~~~ie~~l~~~~gv~~~~v 35 (74)
T 3dxs_X 17 SNSVEAALMNVNGVFKASV 35 (74)
T ss_dssp HHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEEE
Confidence 4679999999999987654
No 42
>2djw_A Probable transcriptional regulator, ASNC family; structural genomics, thermus thermophilus HB8, NPPSFA; 2.40A {Thermus thermophilus}
Probab=22.30 E-value=84 Score=19.23 Aligned_cols=20 Identities=10% Similarity=0.235 Sum_probs=17.3
Q ss_pred hHHHHHHHhcCCCcceEEEe
Q 030653 154 PAELEHLLLSHPEMVDAAVI 173 (174)
Q Consensus 154 p~eVE~~l~~~~~V~~~~Vv 173 (174)
..++++.|.++|.|.+|..+
T Consensus 15 ~~~~~~~l~~~peV~~~~~v 34 (92)
T 2djw_A 15 VQALGEAIAELPQVAEVYSV 34 (92)
T ss_dssp HHHHHHHHTTSTTEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEe
Confidence 57899999999999998754
No 43
>2kke_A Uncharacterized protein; protein northeast structural genomics consortium (NESG), target TR5, PSI-2; NMR {Methanothermobacter thermautotrophicusstr}
Probab=21.49 E-value=79 Score=17.27 Aligned_cols=17 Identities=29% Similarity=0.448 Sum_probs=14.0
Q ss_pred EEeChHHHHHHHhcCCC
Q 030653 150 CQVAPAELEHLLLSHPE 166 (174)
Q Consensus 150 ~~v~p~eVE~~l~~~~~ 166 (174)
.+.+|.|||..-.+.|.
T Consensus 18 vrlypdeiealksrvpa 34 (53)
T 2kke_A 18 VRLYPDEIEALKSRVPA 34 (53)
T ss_dssp EEECHHHHHHHHTTCCS
T ss_pred EEeChhHHHHHHhcCCC
Confidence 57899999998777765
No 44
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=20.91 E-value=73 Score=17.70 Aligned_cols=19 Identities=16% Similarity=0.321 Sum_probs=15.7
Q ss_pred hHHHHHHHhcCCCcceEEE
Q 030653 154 PAELEHLLLSHPEMVDAAV 172 (174)
Q Consensus 154 p~eVE~~l~~~~~V~~~~V 172 (174)
...||++|.+.++|.++.|
T Consensus 17 ~~~i~~~l~~~~gv~~~~v 35 (69)
T 4a4j_A 17 ASSIERAIAKVPGVQSCQV 35 (69)
T ss_dssp HHHHHHHHHTSTTEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEE
Confidence 4679999999999987654
Done!