BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030662
(173 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255645349|gb|ACU23171.1| unknown [Glycine max]
Length = 259
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/171 (76%), Positives = 143/171 (83%), Gaps = 8/171 (4%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
ANQ+PTKTLFVINFDPIRTR RDI++HFEPYGNVLHVRIRRNFAFVQFETQE+ATKALE
Sbjct: 85 ANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALEC 144
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SK++DRV+SVEYAL+DD ER D YDSPRR G Y RSPSP Y RRPSPDYGR
Sbjct: 145 TNMSKILDRVVSVEYALRDDGERGDNYDSPRRRG-----GYERSPSP-YHRRPSPDYGRP 198
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
RSP YDRYNG D RRSPD+GRHRS P Y RRRSPDYG+ RSP +GRYR
Sbjct: 199 RSPVYDRYNGGGPDMRRSPDYGRHRS--PDYGRRRSPDYGKPRSPEYGRYR 247
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N + TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D
Sbjct: 4 IFAGNLE-YDTRQSELERLFAKYGRIDRVDMKSGFAFVFYEDERDAEEAIRALDNVPFGH 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRRLSVEWA 72
>gi|356520256|ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 259
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 131/171 (76%), Positives = 143/171 (83%), Gaps = 8/171 (4%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
ANQ+PTKTLFVINFDPIRTR RDI++HFEPYGNVLHVRIRRNFAFVQFETQE+ATKALE
Sbjct: 85 ANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALEC 144
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SK++DRV+SVEYAL+DD ER D YDSPRR G Y RSPSP Y RRPSPDYGR
Sbjct: 145 TNMSKILDRVVSVEYALRDDGERGDNYDSPRRRG-----GYERSPSP-YHRRPSPDYGRP 198
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
RSP YDRYNG D RRSPD+GRHRS P Y RRRSPDYG+ RSP +GRYR
Sbjct: 199 RSPVYDRYNGGGPDMRRSPDYGRHRS--PDYGRRRSPDYGKPRSPEYGRYR 247
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N + TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D
Sbjct: 4 IFAGNLE-YDTRQSELERLFAKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPFGH 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRRLSVEWA 72
>gi|356559961|ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
max]
Length = 264
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 144/169 (85%), Gaps = 9/169 (5%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
ANQ+PTKTLFVINFDPIRTR RDI++HFEPYGNVLHVRIRRNFAFVQFETQE+ATKA+E
Sbjct: 85 ANQKPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIEC 144
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SK++DRV+SVEYAL+DD ER D YDSPRRGG Y RSPSP Y RRPSPDYGR
Sbjct: 145 TNMSKILDRVVSVEYALRDDGERGDNYDSPRRGG------YERSPSP-YHRRPSPDYGRP 197
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGR 170
RSP YDRYNG D+RRSPD+GRHRS P Y RRRSPDYGR +SP++G+
Sbjct: 198 RSPVYDRYNGGGPDRRRSPDYGRHRS--PDYGRRRSPDYGRRKSPDYGK 244
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N + TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D
Sbjct: 4 IFAGNLE-YDTRQSELERLFSKYGRIDRVDMKSGFAFVYYEDERDAEEAIRALDNVPFGH 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRRLSVEWA 72
>gi|224068024|ref|XP_002302651.1| predicted protein [Populus trichocarpa]
gi|222844377|gb|EEE81924.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/163 (74%), Positives = 133/163 (81%), Gaps = 15/163 (9%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
ANQRPTKTLFVINFDPI TR DIKRHFE YG VLHVRIRRNFAFVQFETQE+ATKALE
Sbjct: 88 ANQRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALEC 147
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T +K++DRV+SVEYAL+DDSER DRYDSPRRG Y GRSPSP YRRRPSPDY R
Sbjct: 148 THMTKILDRVVSVEYALRDDSERGDRYDSPRRGSYN-----GRSPSPVYRRRPSPDYVRA 202
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNR 164
RSP YD+YNGPVYD+R+SPD+GR+ RSP+YGRNR
Sbjct: 203 RSPVYDKYNGPVYDRRQSPDYGRN----------RSPEYGRNR 235
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+FV NF+ TR+ D++R F YG V V ++ FAFV FE +A A+ D
Sbjct: 5 VFVGNFEH-ETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDDRDAADAVRGLDNIPFGY 63
Query: 69 -DRVISVEYA 77
R +SVE+A
Sbjct: 64 DRRRLSVEWA 73
>gi|255564609|ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 259
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 120/165 (72%), Positives = 133/165 (80%), Gaps = 15/165 (9%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
MANQRPTKTLFVINFDPI TR DIKRHFE YG VLHVRIRRNFAFVQFETQE+ATKALE
Sbjct: 87 MANQRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALE 146
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
T +K++DRV+SVEYAL+DDSER D+ DSPRRG S YGRSPSP YRRRPSPDYGR
Sbjct: 147 CTHMTKILDRVVSVEYALRDDSERGDKSDSPRRG-----SHYGRSPSPVYRRRPSPDYGR 201
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRS 165
RSP YD+YNGP YD+RRSP++GR +SP+YGR RS
Sbjct: 202 ARSPVYDKYNGPSYDRRRSPEYGRD----------QSPEYGRYRS 236
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+FV NF+ TR+ +++R F YG V V ++ FAFV FE + +A A+ D
Sbjct: 5 IFVGNFE-FETRQSELERLFSKYGRVERVDMKSGFAFVYFEDERDAADAIRGLDNISFGY 63
Query: 69 -DRVISVEYA 77
R +SVE+A
Sbjct: 64 DRRKLSVEWA 73
>gi|224130604|ref|XP_002320882.1| predicted protein [Populus trichocarpa]
gi|222861655|gb|EEE99197.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/164 (71%), Positives = 134/164 (81%), Gaps = 15/164 (9%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
NQRPTKTLFVINFDPI TR DIKRHFE YG VLHVRIRRNFAFVQFETQE+ATKAL+
Sbjct: 88 TVNQRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALQ 147
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
T +K++DRV+SVEYAL+DDSER DRYDSPRRG Y YGRSPSPA+ RRP+PDYGR
Sbjct: 148 RTHMTKILDRVVSVEYALRDDSERGDRYDSPRRGSY-----YGRSPSPAHHRRPNPDYGR 202
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNR 164
G SP YD+YNGPV+D+RRSPD+GR+ RSP+YGR+R
Sbjct: 203 GHSPVYDKYNGPVHDRRRSPDYGRN----------RSPEYGRHR 236
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+FV NF+ TR+ +++R F YG V V ++ FAFV FE +A A+ D
Sbjct: 3 IFVGNFEQ-ETRQSELERLFRKYGRVERVDMKSGFAFVYFEDDRDAADAIRGLDNIPFGY 61
Query: 69 -DRVISVEYALKDDSERDDRYDSPR 92
R +SVE+A ER D PR
Sbjct: 62 DRRRLSVEWARVYAGERGRHRDGPR 86
>gi|449432024|ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
gi|449477961|ref|XP_004155176.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
sativus]
Length = 253
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 121/152 (79%), Positives = 134/152 (88%), Gaps = 5/152 (3%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
MANQRPTKTLFVINFDPIRTR RDI+RHFEPYG VL+VRIRRNFAFVQFETQE+ATKALE
Sbjct: 86 MANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALE 145
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYD-SPRR-GGYGR--HSPYGRSPSPAYRRRPSP 116
T SK++DRV+SVEYAL+DD ER D +D SPRR GGYGR SPY RSPSP +RRRPSP
Sbjct: 146 CTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSP 205
Query: 117 DYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
DYGR SPAYDRYNGP Y++RRSPD+GR+RSP
Sbjct: 206 DYGRAHSPAYDRYNGP-YERRRSPDYGRNRSP 236
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+FV NF TR+ +++R F YG V + ++ FAFV FE + +A A+ D
Sbjct: 4 IFVGNFG-YDTRQSELERLFSKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGY 62
Query: 69 -DRVISVEYA 77
R +SVE+A
Sbjct: 63 DRRRLSVEWA 72
>gi|357514487|ref|XP_003627532.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355521554|gb|AET02008.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 301
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 121/172 (70%), Positives = 137/172 (79%), Gaps = 18/172 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ+PTKTLFVINFDPIRTR DI+RHF+PYG + HVRIRRNFAFVQ+ETQE+ATKALE T
Sbjct: 86 NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECT 145
Query: 63 DRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ SK++DRV+SVEYAL+DDS+R D Y SPRRGG RSPSP YRRRPSPDYGR
Sbjct: 146 NMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGG-----GLARSPSPGYRRRPSPDYGRP 200
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
RSP YDRY GP D+RRSPD+GR+ RSPDYGRNRSP +GRYRR
Sbjct: 201 RSPVYDRYTGP--DRRRSPDYGRN----------RSPDYGRNRSPEYGRYRR 240
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYA 77
TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D R +SVE+A
Sbjct: 13 TRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWA 72
>gi|297745508|emb|CBI40588.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 221 bits (563), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 127/146 (86%), Gaps = 6/146 (4%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
MANQRPTKTLFVINFDPIRTR RDI+RHFEPYG VLHVRIRRNFAFVQ+ETQE+ATKALE
Sbjct: 69 MANQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALE 128
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRR-RPSPD 117
T SK++DRV+SVEYAL+DDS D+YDSPRRGGY R SPYGRSPSP RR RPSPD
Sbjct: 129 CTHMSKILDRVVSVEYALRDDS---DKYDSPRRGGYSRRGESPYGRSPSPVNRRGRPSPD 185
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHG 143
YGR +SP YDRYNGP Y++ RSP++G
Sbjct: 186 YGRAQSPVYDRYNGPAYERNRSPEYG 211
>gi|225470972|ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
vinifera]
Length = 241
Score = 221 bits (563), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 127/146 (86%), Gaps = 6/146 (4%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
MANQRPTKTLFVINFDPIRTR RDI+RHFEPYG VLHVRIRRNFAFVQ+ETQE+ATKALE
Sbjct: 86 MANQRPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALE 145
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRR-RPSPD 117
T SK++DRV+SVEYAL+DDS D+YDSPRRGGY R SPYGRSPSP RR RPSPD
Sbjct: 146 CTHMSKILDRVVSVEYALRDDS---DKYDSPRRGGYSRRGESPYGRSPSPVNRRGRPSPD 202
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHG 143
YGR +SP YDRYNGP Y++ RSP++G
Sbjct: 203 YGRAQSPVYDRYNGPAYERNRSPEYG 228
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+F NF+ TR+ D++R F YG V V ++ FAFV FE + +A A+ D
Sbjct: 4 IFCGNFE-YETRQSDLERLFSKYGRVERVDMKSGFAFVYFEDEHDADDAIRGLDNIPFGY 62
Query: 69 -DRVISVEYA 77
R +SVE+A
Sbjct: 63 DRRRLSVEWA 72
>gi|217072928|gb|ACJ84824.1| unknown [Medicago truncatula]
Length = 242
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/170 (69%), Positives = 134/170 (78%), Gaps = 18/170 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ+PTKTLFVINFDPIRTR DI+RHF+PYG + HVRIRRNFAFVQ+ETQE+ATKALE T
Sbjct: 86 NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECT 145
Query: 63 DRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ SK++DRV+SVEYAL+DDS+R D Y SPRRGG RSPSP YRRRPSPDYGR
Sbjct: 146 NMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGG-----GLARSPSPGYRRRPSPDYGRP 200
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRY 171
RSP YDRY GP D+RRSPD+GR+ SPDYGRNRSP +GRY
Sbjct: 201 RSPVYDRYTGP--DRRRSPDYGRN----------GSPDYGRNRSPEYGRY 238
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYA 77
TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D R +SVE+A
Sbjct: 13 TRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWA 72
>gi|388506284|gb|AFK41208.1| unknown [Medicago truncatula]
Length = 249
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 133/168 (79%), Gaps = 18/168 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ+PTKTLFVINFDPIRTR DI+RHF+PYG + HVRIRRNFAFVQ+ETQE+ATKALE T
Sbjct: 86 NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECT 145
Query: 63 DRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ SK++DRV+SVEYAL+DDS+R D Y SPRRGG RSPSP YRRRPSPDYGR
Sbjct: 146 NMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGG-----GLARSPSPGYRRRPSPDYGRP 200
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
RSP YDRY GP D+RRSPD+GR+ RSPDYGRNRSP +G
Sbjct: 201 RSPVYDRYTGP--DRRRSPDYGRN----------RSPDYGRNRSPEYG 236
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYA 77
TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D R +SVE+A
Sbjct: 13 TRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWA 72
>gi|357514489|ref|XP_003627533.1| Arginine/serine-rich splicing factor [Medicago truncatula]
gi|355521555|gb|AET02009.1| Arginine/serine-rich splicing factor [Medicago truncatula]
Length = 217
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 133/168 (79%), Gaps = 18/168 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ+PTKTLFVINFDPIRTR DI+RHF+PYG + HVRIRRNFAFVQ+ETQE+ATKALE T
Sbjct: 54 NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECT 113
Query: 63 DRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ SK++DRV+SVEYAL+DDS+R D Y SPRRGG RSPSP YRRRPSPDYGR
Sbjct: 114 NMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGG-----GLARSPSPGYRRRPSPDYGRP 168
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
RSP YDRY GP D+RRSPD+GR+ RSPDYGRNRSP +G
Sbjct: 169 RSPVYDRYTGP--DRRRSPDYGRN----------RSPDYGRNRSPEYG 204
>gi|297821068|ref|XP_002878417.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
gi|297324255|gb|EFH54676.1| arginine/serine-rich splicing factor 31 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 137/180 (76%), Gaps = 19/180 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+N +PTKTLFVINFDPIRT+E DI++HFEPYG V++VRIRRNF+FVQFETQE+ATKALE
Sbjct: 86 TSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVINVRIRRNFSFVQFETQEDATKALE 145
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYD--SPRRGGYG----RHSP-YGRSPSPAYRRR 113
+T RSK++DRV+SVEYALKDD ERDDRY SPRR R SP YGR PSP Y RR
Sbjct: 146 ATQRSKILDRVVSVEYALKDDDERDDRYGGRSPRRSLSPVYRRRPSPDYGRRPSPDYGRR 205
Query: 114 PSPDYGRGRSPAYDRYNGP-VYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
PSPD GR RSP YDRY GP Y++RRSPD+G RRS DYGR RSP + RYR
Sbjct: 206 PSPDNGRARSPEYDRYKGPAAYERRRSPDYG-----------RRSSDYGRQRSPGYDRYR 254
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+FV NF+ TR+ D++R F+ YG V V ++ +AFV FE + +A A+ D
Sbjct: 4 VFVGNFE-YETRQSDLERLFDKYGRVERVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGY 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRRLSVEWA 72
>gi|388494340|gb|AFK35236.1| unknown [Medicago truncatula]
Length = 249
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/168 (69%), Positives = 132/168 (78%), Gaps = 18/168 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ+PTKTLFVINFDPIRTR DI+RHF+PYG + HVRIRRNFAFVQ+ETQE+ATKALE T
Sbjct: 86 NQKPTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECT 145
Query: 63 DRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ SK++DRV+SVEYAL+DDS+R D Y SPRRGG RSPSP YRRRPSPDYGR
Sbjct: 146 NMSKILDRVVSVEYALRDDSDRVDNYGGSPRRGG-----GLARSPSPGYRRRPSPDYGRP 200
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
RSP YDRY GP D+RRSPD+GR+ SPDYGRNRSP +G
Sbjct: 201 RSPVYDRYTGP--DRRRSPDYGRN----------GSPDYGRNRSPEYG 236
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYA 77
TR+ +++R F YG + V ++ FAFV +E + +A +A+ + D R +SVE+A
Sbjct: 13 TRQSELERLFSKYGRIERVDMKSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWA 72
>gi|6899884|emb|CAB71893.1| ARGININE/SERINE-RICH SPLICING FACTOR RSP31 [Arabidopsis thaliana]
Length = 271
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 135/179 (75%), Gaps = 19/179 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N +PTKTLFVINFDPIRT+E DI++HFEPYG V +VRIRRNF+FVQFETQE+ATKALE+
Sbjct: 87 SNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYD--SPRRGGYG----RHSP-YGRSPSPAYRRRP 114
T RSK++DRV+SVEYALKDD ERDDR SPRR R SP YGR PSP RRP
Sbjct: 147 TQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRP 206
Query: 115 SPDYGRGRSPAYDRYNGP-VYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
SPDYGR RSP YDRY GP Y++RRSPD+G RRS DYGR RSP + RYR
Sbjct: 207 SPDYGRARSPEYDRYKGPAAYERRRSPDYG-----------RRSSDYGRQRSPGYDRYR 254
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 84/207 (40%), Gaps = 52/207 (25%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+FV NF+ TR+ D++R F+ YG V V ++ +AFV FE + +A A+ D
Sbjct: 4 VFVGNFE-YETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGY 62
Query: 68 VDRVISVEYA-------------------------LKDDSERDDRYDSPRRGGYGRHSPY 102
R +SVE+A + D R +D + PY
Sbjct: 63 EKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEK-----HFEPY 117
Query: 103 GRSPSPAYRRRPS-------PDYGRG-----RSPAYDRYNGPVY-----DQRRSPDHGRH 145
G+ + RR S D + RS DR Y D+R + GR
Sbjct: 118 GKVTNVRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRS 177
Query: 146 --RSPVPVYDRRRSPDYGRNRSPNFGR 170
RS PVY RR SPDYGR SP GR
Sbjct: 178 PRRSLSPVYRRRPSPDYGRRPSPGQGR 204
>gi|1707366|emb|CAA67798.1| splicing factor [Arabidopsis thaliana]
Length = 264
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 135/179 (75%), Gaps = 19/179 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N +PTKTLFVINFDPIRT+E DI++HFEPYG V +VRIRRNF+FVQFETQE+ATKALE+
Sbjct: 87 SNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYD--SPRRGGYG----RHSP-YGRSPSPAYRRRP 114
T RSK++DRV+SVEYALKDD ERDDR SPRR R SP YGR PSP RRP
Sbjct: 147 TQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRP 206
Query: 115 SPDYGRGRSPAYDRYNGP-VYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
SPDYGR RSP YDRY GP Y++RRSPD+G RRS DYGR RSP + RYR
Sbjct: 207 SPDYGRARSPEYDRYKGPAAYERRRSPDYG-----------RRSSDYGRQRSPGYDRYR 254
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+FV NF+ TR+ D++R F+ YG V V ++ +AFV FE + +A A+ D
Sbjct: 4 VFVGNFE-YETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGY 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRKLSVEWA 72
>gi|18412169|ref|NP_567120.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
gi|26454661|sp|P92964.2|RSP31_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP31
gi|16612268|gb|AAL27502.1|AF439831_1 AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|21928093|gb|AAM78075.1| AT3g61860/F21F14_30 [Arabidopsis thaliana]
gi|332646749|gb|AEE80270.1| arginine/serine-rich-splicing factor RSP31 [Arabidopsis thaliana]
Length = 264
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 135/179 (75%), Gaps = 19/179 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N +PTKTLFVINFDPIRT+E DI++HFEPYG V +VRIRRNF+FVQFETQE+ATKALE+
Sbjct: 87 SNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTNVRIRRNFSFVQFETQEDATKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYD--SPRRGGYG----RHSP-YGRSPSPAYRRRP 114
T RSK++DRV+SVEYALKDD ERDDR SPRR R SP YGR PSP RRP
Sbjct: 147 TQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSLSPVYRRRPSPDYGRRPSPGQGRRP 206
Query: 115 SPDYGRGRSPAYDRYNGP-VYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
SPDYGR RSP YDRY GP Y++RRSPD+G RRS DYGR RSP + RYR
Sbjct: 207 SPDYGRARSPEYDRYKGPAAYERRRSPDYG-----------RRSSDYGRQRSPGYDRYR 254
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+FV NF+ TR+ D++R F+ YG V V ++ +AFV FE + +A A+ D
Sbjct: 4 VFVGNFE-YETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGY 62
Query: 68 VDRVISVEYA 77
R +SVE+A
Sbjct: 63 EKRRLSVEWA 72
>gi|15226019|ref|NP_182184.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|4415941|gb|AAD20171.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|17529006|gb|AAL38713.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|24030496|gb|AAN41395.1| putative arginine/serine-rich splicing factor [Arabidopsis
thaliana]
gi|222423842|dbj|BAH19886.1| AT2G46610 [Arabidopsis thaliana]
gi|330255634|gb|AEC10728.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 250
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 131/167 (78%), Gaps = 11/167 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
++NQRPTKTLFVINFDPIRTRERD++RHFEPYG VL+VR+RRNFAFVQF TQE+ATKAL+
Sbjct: 88 VSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALD 147
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
ST SKL+D+V+SVEYAL++ ER+DRY RR RSPSP YRRRPSPDY R
Sbjct: 148 STHNSKLLDKVVSVEYALREAGEREDRYAGSRR---------RRSPSPVYRRRPSPDYTR 198
Query: 121 GRSPAYDRYNGPV-YDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSP 166
RSP YDRY GP Y++R+SPD+GR RS R RSP Y R+RSP
Sbjct: 199 RRSPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSP 244
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
++V NFD TR D++R F +G V V ++ +AFV FE + +A A+ TD +
Sbjct: 4 VYVGNFD-YDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNTTFGY 62
Query: 68 VDRVISVEYALKDDSER 84
R +SVE+A ER
Sbjct: 63 GRRKLSVEWAKDFQGER 79
>gi|42571257|ref|NP_973702.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|330255635|gb|AEC10729.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 224
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/167 (67%), Positives = 131/167 (78%), Gaps = 11/167 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
++NQRPTKTLFVINFDPIRTRERD++RHFEPYG VL+VR+RRNFAFVQF TQE+ATKAL+
Sbjct: 62 VSNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALD 121
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
ST SKL+D+V+SVEYAL++ ER+DRY RR RSPSP YRRRPSPDY R
Sbjct: 122 STHNSKLLDKVVSVEYALREAGEREDRYAGSRR---------RRSPSPVYRRRPSPDYTR 172
Query: 121 GRSPAYDRYNGPV-YDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSP 166
RSP YDRY GP Y++R+SPD+GR RS R RSP Y R+RSP
Sbjct: 173 RRSPEYDRYKGPAPYERRKSPDYGR-RSSDYGRARARSPGYDRSRSP 218
>gi|297828391|ref|XP_002882078.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
gi|297327917|gb|EFH58337.1| hypothetical protein ARALYDRAFT_483824 [Arabidopsis lyrata subsp.
lyrata]
Length = 250
Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/166 (67%), Positives = 127/166 (76%), Gaps = 19/166 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+NQRPTKTLFVINFDPIRTRERD++RHFEPYG VL+VRIRRNFAFVQF TQE+ATKAL+
Sbjct: 89 SNQRPTKTLFVINFDPIRTRERDMERHFEPYGKVLNVRIRRNFAFVQFATQEDATKALDC 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
T SK++DRV+SVEYAL++D ER+DRY SPRR RSPSP YRRRPSPDYGR
Sbjct: 149 THNSKILDRVVSVEYALREDGEREDRYAGSPRR----------RSPSPVYRRRPSPDYGR 198
Query: 121 GRSPAYDRYNGPV--------YDQRRSPDHGRHRSPVPVYDRRRSP 158
RSP YDRY GP +RRSPD+GR R+ P YD RSP
Sbjct: 199 PRSPEYDRYKGPAPYERRRSPDYRRRSPDYGRARARSPGYDSSRSP 244
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+FV NFD TR+ D++R F YG V V ++ +AFV FE + +A A+ TD +
Sbjct: 4 VFVGNFD-YDTRQSDLERLFSKYGRVERVDMKSGYAFVYFEDERDAEDAIRGTDNTTFGY 62
Query: 68 VDRVISVEYALKDDSER 84
R +SVE+A ER
Sbjct: 63 ERRKLSVEWAKGFKGER 79
>gi|115456922|ref|NP_001052061.1| Os04g0118900 [Oryza sativa Japonica Group]
gi|38344865|emb|CAE01291.2| OSJNBa0020P07.8 [Oryza sativa Japonica Group]
gi|113563632|dbj|BAF13975.1| Os04g0118900 [Oryza sativa Japonica Group]
gi|116317923|emb|CAH65946.1| H0716A07.4 [Oryza sativa Indica Group]
gi|218194243|gb|EEC76670.1| hypothetical protein OsI_14641 [Oryza sativa Indica Group]
gi|222628274|gb|EEE60406.1| hypothetical protein OsJ_13581 [Oryza sativa Japonica Group]
Length = 245
Score = 181 bits (460), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 109/137 (79%), Gaps = 4/137 (2%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR DI+RHFEP+G + +VRIRRNFAFVQFETQEEATKALE+
Sbjct: 88 VNTKPTKTLFVINFDPINTRVTDIERHFEPFGKLSNVRIRRNFAFVQFETQEEATKALEA 147
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRRRPSPDYG 119
T +KL+DRVISVEYA +DD+ER DRYD RGGYGR SPY RS SP YR RPSPDYG
Sbjct: 148 THSTKLLDRVISVEYAFRDDTERGDRYDGA-RGGYGRRDDSPYRRSVSPVYRSRPSPDYG 206
Query: 120 RGRSPAYDRYN-GPVYD 135
R RSP Y Y+ PV D
Sbjct: 207 RQRSPVYGSYDRSPVND 223
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D TR ++ R F YG + + ++ FAFV FE + + +A+ + D
Sbjct: 4 VFVGNLD-YDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGYPFGP 62
Query: 70 --RVISVEYALKDDSERDDRYDSP 91
R +SVE++ D R D Y P
Sbjct: 63 GRRRLSVEWSRGDRGSRRDGYSKP 86
>gi|255539555|ref|XP_002510842.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223549957|gb|EEF51444.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 331
Score = 166 bits (420), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 121/174 (69%), Gaps = 19/174 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP+KTLFVINFDP TR +D++RHFEPYG ++ VRIRRNFAFVQ+E+Q++ATKALE+
Sbjct: 48 TNTRPSKTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYESQDDATKALEA 107
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYD-------SPRRGGYGRHSPYGRSPSPAYRRRP 114
T+ SKL+DRVISVEYA++DD ER + Y SP R + R RS SP R R
Sbjct: 108 TNMSKLMDRVISVEYAVRDDDERRNGYSPDRGRDRSPDRRSHDRK----RSSSPYRRERG 163
Query: 115 SPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR--NRSP 166
SPDYGRG SP GP +R SPD+GR RSP P R SPDYGR +RSP
Sbjct: 164 SPDYGRGPSP------GPYRRERASPDYGRRRSPSPYKRDRASPDYGRASSRSP 211
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 123/176 (69%), Gaps = 11/176 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP KTLFVINFDP TR RD++RHF+PYG +L++RIRRNFAF+Q+E+QE+AT+ALE+
Sbjct: 89 TNLRPAKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY--DSPRRGGYGRHS-PYGRSPSPAYRRRPSPDY 118
T+ SKL+DRVISVEYA++DD ER + Y D RR S GRS SP R R SPDY
Sbjct: 149 TNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY 208
Query: 119 GRGRSP-AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
GRG SP AY R +R SPD+GR SP P R PD+GR+RSP+ R R
Sbjct: 209 GRGSSPSAYRR-------ERASPDYGRDPSPSPRRRDRAMPDHGRSRSPSHHRRER 257
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F NFD R+ D++R F YG V V ++ FAF+ E + +A A+ DR+
Sbjct: 4 IFCGNFD-YDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGR 62
Query: 68 VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 63 KGRRLRVEWTKQE 75
>gi|359490360|ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 480
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 123/176 (69%), Gaps = 11/176 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP KTLFVINFDP TR RD++RHF+PYG +L++RIRRNFAF+Q+E+QE+AT+ALE+
Sbjct: 91 TNLRPAKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEA 150
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY--DSPRRGGYGRHS-PYGRSPSPAYRRRPSPDY 118
T+ SKL+DRVISVEYA++DD ER + Y D RR S GRS SP R R SPDY
Sbjct: 151 TNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY 210
Query: 119 GRGRSP-AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
GRG SP AY R +R SPD+GR SP P R PD+GR+RSP+ R R
Sbjct: 211 GRGSSPSAYRR-------ERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRER 259
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F NFD R+ D++R F YG V V ++ FAF+ E + +A A+ DR+
Sbjct: 6 IFCGNFD-YDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGR 64
Query: 68 VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 65 KGRRLRVEWTKQE 77
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
Length = 479
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 123/176 (69%), Gaps = 11/176 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP KTLFVINFDP TR RD++RHF+PYG +L++RIRRNFAF+Q+E+QE+AT+ALE+
Sbjct: 89 TNLRPAKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY--DSPRRGGYGRHS-PYGRSPSPAYRRRPSPDY 118
T+ SKL+DRVISVEYA++DD ER + Y D RR S GRS SP R R SPDY
Sbjct: 149 TNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKSSERSYDKGRSLSPYRRERGSPDY 208
Query: 119 GRGRSP-AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
GRG SP AY R +R SPD+GR SP P R PD+GR+RSP+ R R
Sbjct: 209 GRGSSPSAYRR-------ERASPDYGRDPSPSPRRRDRAIPDHGRSRSPSHHRRER 257
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F NFD R+ D++R F YG V V ++ FAF+ E + +A A+ DR+
Sbjct: 4 IFCGNFD-YDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGR 62
Query: 68 VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 63 KGRRLRVEWTKQE 75
>gi|242037183|ref|XP_002465986.1| hypothetical protein SORBIDRAFT_01g049590 [Sorghum bicolor]
gi|241919840|gb|EER92984.1| hypothetical protein SORBIDRAFT_01g049590 [Sorghum bicolor]
Length = 266
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 133/177 (75%), Gaps = 11/177 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+ +PT+TLFVINFDP+RT+ +DI+RHFEPYG + ++RIRRNFAFVQ+ETQEEA+ A+++
Sbjct: 87 GDVKPTRTLFVINFDPMRTKVQDIERHFEPYGKIANIRIRRNFAFVQYETQEEASAAVKN 146
Query: 62 TDRSKLVDRVISVEYAL-KDDSERDDRYDSPRRGGYGRH--SPYGRSPSPAYRRRPSPDY 118
TD+S ++DRV++VEYA DDSERDDRY SP+RG Y R +PY RSPSP YRR SPDY
Sbjct: 147 TDKSTILDRVVTVEYAFRDDDSERDDRYGSPKRGAYDRRRGNPYLRSPSPRYRREYSPDY 206
Query: 119 G-RGRSPAYDRYNGPVYDQRRSPDHGRH-RSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
RGR P YDR +G +Y +RRSP + R+ R PVYDR Y R RSP + Y R
Sbjct: 207 DRRGRYPGYDRRDGAMY-ERRSPVYDRYNRGRSPVYDR-----YNRGRSPVYDGYDR 257
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+F NFD TR+ D++R F YG++ + ++ +AF+ FE + +A A+ D
Sbjct: 4 VFCGNFDH-DTRQYDLERLFSKYGSISRIDMKTGYAFIYFEDERDAEDAIRRLDNVSFGY 62
Query: 69 -DRVISVEYA 77
R +SVE++
Sbjct: 63 DRRKLSVEWS 72
>gi|357165299|ref|XP_003580336.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 261
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 115/164 (70%), Gaps = 16/164 (9%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR DI+RHF+P+G + +VRIR+NFAFVQFETQEEATKAL++
Sbjct: 91 VNTKPTKTLFVINFDPINTRVSDIERHFDPFGKISNVRIRKNFAFVQFETQEEATKALDA 150
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRH-------SPYGRSPSPAYRR-R 113
T +KL+DRVISVEYA +DDSE DRYD P RGG G S Y RS SP YRR R
Sbjct: 151 THSTKLLDRVISVEYAFRDDSEPGDRYDRPIRGGGGGGGYGRQDDSSYRRSVSPVYRRSR 210
Query: 114 PSPDYGRGRSPA--------YDRYNGPVYDQRRSPDHGRHRSPV 149
PSPDYGR RSPA YDR PV D+ R R RSP+
Sbjct: 211 PSPDYGRPRSPAELSPVYGSYDRSRSPVRDRYRGRSPLRSRSPL 254
>gi|217071698|gb|ACJ84209.1| unknown [Medicago truncatula]
Length = 294
Score = 162 bits (410), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 126/192 (65%), Gaps = 22/192 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +P+KTLF+INFDP+ TR RD++RHF+PYG + ++RIRRNFAF+QFETQEEATKALE+
Sbjct: 90 TNTKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRR------GGYGRHSP-----YGRSPSPAY 110
T+ SK +DRVI+VEYA++DD + D Y RR G YGR SP GRSPSP
Sbjct: 150 TNLSKFMDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYR 209
Query: 111 RRRPSPDYGRGRSPAY--DRYNGPVYDQRRSPDHGRH--RSPVPVY-------DRRRSPD 159
R R SPDYGRG +PA + P Y++ SP +GR+ RSP P + R SP
Sbjct: 210 RGRGSPDYGRGSNPASRPEPGGSPKYERAESPANGRYDSRSPPPRGSNPPSRPEARGSPK 269
Query: 160 YGRNRSPNFGRY 171
Y R SP RY
Sbjct: 270 YERAESPMNRRY 281
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 10/103 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG + V ++ FAF+ E + +A A+ D+++
Sbjct: 1 MKPIFCGNLD-FDARQSDVERLFRKYGKIDRVDLKSGFAFIYMEGERDAEYAIRRLDQTE 59
Query: 67 L--VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS 107
R I VE+ +ERD+R R GG + S PS
Sbjct: 60 FGRKGRRIRVEWT---KAERDNR----RSGGDSKKSSTNTKPS 95
>gi|449463729|ref|XP_004149584.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
sativus]
gi|449528505|ref|XP_004171244.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
sativus]
Length = 367
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 118/175 (67%), Gaps = 11/175 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP+KTLFVINFDP TR RD++RHF+PYG +L+VRIRRNFAFVQ+E QE+AT+ALE
Sbjct: 97 TNTRPSKTLFVINFDPYHTRIRDLERHFDPYGKILNVRIRRNFAFVQYELQEDATRALEV 156
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SKL+DRVISVEYA++DD E+ + Y SP R RSPSP R R SPDYG G
Sbjct: 157 TNMSKLMDRVISVEYAVRDDDEKRNGY-SPDRNRDRSPDRKRRSPSPYRRERGSPDYGNG 215
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR---SPDYGRNRSPNFGRYRR 173
S P QR SPD+G RSP P Y R R SPDY R RSP YRR
Sbjct: 216 IS------RSPYRRQRASPDYGSRRSPSP-YQRERERGSPDYSRGRSPKHSPYRR 263
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ R+ D++R F YG V V ++ FAF+ E + EA A+ + DR +
Sbjct: 1 MKPIFCGNFE-YDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDEREAEDAIHALDRRE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 60 FGRKGRRLRVEWTKQE 75
>gi|388513547|gb|AFK44835.1| unknown [Medicago truncatula]
Length = 294
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 126/192 (65%), Gaps = 22/192 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +P+KTLF+INFDP+ TR RD++RHF+PYG + ++RIRRNFAF+QFETQEEATKALE+
Sbjct: 90 TNTKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNLRIRRNFAFIQFETQEEATKALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRR------GGYGRHSP-----YGRSPSPAY 110
T+ SK +DRVI+VEYA++DD + D Y RR G YGR SP GRSPSP
Sbjct: 150 TNLSKFMDRVITVEYAIRDDDVKRDGYSPDRRGRGSPDGRYGRGSPDGRYGRGRSPSPYR 209
Query: 111 RRRPSPDYGRGRSPAY--DRYNGPVYDQRRSPDHGRH--RSPVPVY-------DRRRSPD 159
R R SPDYGRG +PA + P Y++ SP +GR+ RSP P + R SP
Sbjct: 210 RGRGSPDYGRGSNPASRPEPRGSPKYERAESPANGRYDSRSPPPRGSNPPSRPEARGSPK 269
Query: 160 YGRNRSPNFGRY 171
Y R SP RY
Sbjct: 270 YERAESPMNRRY 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG + V ++ FAF+ E + +A A+ D+++
Sbjct: 1 MKPIFCGNLD-FDARQSDVERLFRKYGKIDRVDLKSGFAFIYMEDERDAEYAIRRLDQTE 59
Query: 67 L--VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS 107
R I V + +ERD+R R GG + S PS
Sbjct: 60 FGRKGRRIRVGWT---KAERDNR----RSGGDSKKSSTNTKPS 95
>gi|449463727|ref|XP_004149583.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Cucumis
sativus]
Length = 376
Score = 162 bits (410), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 118/175 (67%), Gaps = 11/175 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP+KTLFVINFDP TR RD++RHF+PYG +L VRIRRNFAFVQ+E QE+AT+ALE
Sbjct: 103 TNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALEL 162
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SKL+DRVISVEYA++DD ++ + Y SP R RS SP R R SPDYG G
Sbjct: 163 TNMSKLMDRVISVEYAVRDDDDKRNGY-SPDRNRDRSPDRKRRSSSPYRRERGSPDYGNG 221
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR---SPDYGRNRSPNFGRYRR 173
S P QR SPD+G RSP P Y R R SPDYGR RSPN YRR
Sbjct: 222 IS------RSPYRRQRASPDYGSRRSPSP-YQRERERGSPDYGRGRSPNHSPYRR 269
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ R+ D++R F YG V V ++ FAF+ E + +A A+ + DR +
Sbjct: 1 MKPIFCGNFE-YDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRRE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 60 FGRKGRRLRVEWTKQE 75
>gi|116784190|gb|ABK23251.1| unknown [Picea sitchensis]
Length = 299
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 126/193 (65%), Gaps = 22/193 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
A PTKTLFVINFDP T+ RD++RHFEPYG +++VRIRRNFAFVQ+E+QE+ATKALES
Sbjct: 90 AGLNPTKTLFVINFDPYSTKVRDLERHFEPYGKLIYVRIRRNFAFVQYESQEDATKALES 149
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRG-GYGRHSPY---GRSPSPAYRRRP--- 114
T SK++DRVI+VEYA +DS+R Y SP + YG+ + RS SP Y RRP
Sbjct: 150 THMSKMLDRVITVEYAQGEDSDRRGGYSSPIQSRRYGKAADVRDRDRSASPRYGRRPVRG 209
Query: 115 SPDYGRGRSPAYDRYN-----------GPVYD---QRRSPDHGRHRSPVPVY-DRRRSPD 159
SPDYGR RSP Y R + P+Y +R S D+GR SPV V RR PD
Sbjct: 210 SPDYGRARSPIYARSSERHSHDYGRAPSPIYARHPERHSHDYGRAASPVYVSRPRRDIPD 269
Query: 160 YGRNRSPNFGRYR 172
YGR SP RYR
Sbjct: 270 YGRVASPVHERYR 282
>gi|116780574|gb|ABK21727.1| unknown [Picea sitchensis]
gi|116793253|gb|ABK26673.1| unknown [Picea sitchensis]
Length = 271
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 122/176 (69%), Gaps = 15/176 (8%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+P KTLFVINFDP T +D+++HFEPYG VL+VRIRRNFAFVQFE+QEEATKAL STD+
Sbjct: 93 KPAKTLFVINFDPADTGVKDLEKHFEPYGKVLNVRIRRNFAFVQFESQEEATKALHSTDK 152
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSP-RRGGYGRHSPY-GRSPSPAYRRRP---SPDYG 119
SK++D +ISVEYA +DD +R SP RRG YGR + RS SP Y RR SPDYG
Sbjct: 153 SKVLDSIISVEYAQRDDGDRRGGRSSPVRRGSYGRSAEGRDRSESPIYSRRALRDSPDYG 212
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR---SPDYGRNRSPNFGRYR 172
R SP Y R + +R SPD+GR S P+Y RR SPDYGR SP RYR
Sbjct: 213 RAPSPIYARRS-----ERSSPDYGRAAS--PIYARRLQRDSPDYGRVLSPVHERYR 261
>gi|449529618|ref|XP_004171795.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like, partial
[Cucumis sativus]
Length = 282
Score = 161 bits (407), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 118/175 (67%), Gaps = 11/175 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP+KTLFVINFDP TR RD++RHF+PYG +L VRIRRNFAFVQ+E QE+AT+ALE
Sbjct: 9 TNTRPSKTLFVINFDPYHTRTRDLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALEL 68
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T+ SKL+DRVISVEYA++DD ++ + Y SP R RS SP R R SPDYG G
Sbjct: 69 TNMSKLMDRVISVEYAVRDDDDKRNGY-SPDRNRDRSPDRKRRSSSPYRRERGSPDYGNG 127
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR---SPDYGRNRSPNFGRYRR 173
S P QR SPD+G RSP P Y R R SPDYGR RSPN YRR
Sbjct: 128 IS------RSPYRRQRASPDYGSRRSPSP-YQRERERGSPDYGRGRSPNHSPYRR 175
>gi|242075010|ref|XP_002447441.1| hypothetical protein SORBIDRAFT_06g001100 [Sorghum bicolor]
gi|241938624|gb|EES11769.1| hypothetical protein SORBIDRAFT_06g001100 [Sorghum bicolor]
gi|448878272|gb|AGE46099.1| arginine/serine-rich splicing factor RS28 transcript I [Sorghum
bicolor]
Length = 238
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/149 (64%), Positives = 110/149 (73%), Gaps = 7/149 (4%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +PT+TLFVINFDPI TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KAL++
Sbjct: 87 ANTKPTRTLFVINFDPINTRVSDIERHFAPFGNLSSVRIRKNFAFVQFETLEEARKALDA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T + L+DRVISVEYA +DDSER DRYDSPRRGG SP YR RPSPDYGR
Sbjct: 147 THATTLLDRVISVEYAFRDDSERSDRYDSPRRGGGYGRR----GDSPVYRSRPSPDYGRP 202
Query: 122 RSPAYDRYN-GPVYDQ-RRSPDHGRHRSP 148
SP Y Y+ PV D+ RRSP + R RSP
Sbjct: 203 ASPVYGSYDRSPVRDRYRRSPAY-RSRSP 230
>gi|224035701|gb|ACN36926.1| unknown [Zea mays]
gi|414588139|tpg|DAA38710.1| TPA: arginine/serine-rich splicing factor 2 [Zea mays]
Length = 239
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/150 (62%), Positives = 108/150 (72%), Gaps = 8/150 (5%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +PT+TLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KALE+
Sbjct: 87 ANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIRKNFAFVQFETMEEARKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T + L+DRVISVEYA +DDSE DRY SPRR R SP YR RPSPDYGR
Sbjct: 147 THATTLLDRVISVEYAFRDDSEVSDRYGSPRR----GGGYGRRGDSPVYRSRPSPDYGRP 202
Query: 122 RSPAYDRYN--GPVYDQ-RRSPDHGRHRSP 148
SP Y Y+ GPV D+ RRSP + R RSP
Sbjct: 203 ASPVYGSYDGPGPVRDRYRRSPAY-RSRSP 231
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D TR ++ R F YG V + I+ +AFV FE + + A+ + D
Sbjct: 4 VFVGNLD-YDTRHSELDRLFYRYGRVERIDIKSGYAFVYFEDERDGNDAIRALDGYPFGP 62
Query: 70 --RVISVEYALKDDSERDD 86
R +SVE++ + + R D
Sbjct: 63 GRRRLSVEWSRGEQAGRRD 81
>gi|195628072|gb|ACG35866.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 255
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 123/167 (73%), Gaps = 9/167 (5%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+ +PT+TLFVINFDPIRT+ +DI++HFEPYG + ++RIRRNFAFVQ+ETQEEA+ A+++
Sbjct: 87 GDVKPTRTLFVINFDPIRTKVQDIEKHFEPYGKIANIRIRRNFAFVQYETQEEASAAVKN 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDS-PRRGGYGRH--SPYGRSPSPAYRRRPSPDY 118
TD+S ++DRV++VEYA +DD D P++G Y R SPY RSPSP YRR PDY
Sbjct: 147 TDKSTILDRVVTVEYAFRDDDGDRDDRYDIPKQGAYDRRGGSPYMRSPSPRYRRDYGPDY 206
Query: 119 G-RGRSPAYDRYNGPVYDQRRSPDHGRH---RSPV-PVYDRRRSPDY 160
G RGR P Y R +G +Y +RRSP + R+ RSP YDRRRSP Y
Sbjct: 207 GRRGRYPGYGRRDGAMY-ERRSPVYDRYGGGRSPAYDRYDRRRSPGY 252
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+F NFD TR+ D++R F YG + + ++ +AF+ FE + +A A+ D
Sbjct: 4 VFCGNFDH-DTRQYDLERLFSKYGPISRIDMKLGYAFIYFEDERDAEDAIRRLDNVSFGY 62
Query: 69 -DRVISVEYA 77
R +SVE++
Sbjct: 63 NRRRLSVEWS 72
>gi|47680305|gb|AAT37136.1| arginine/serine-rich splicing factor 2 [Zea mays]
gi|47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [Zea mays]
Length = 239
Score = 156 bits (395), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/149 (61%), Positives = 104/149 (69%), Gaps = 6/149 (4%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +PT+TLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KALE+
Sbjct: 87 ANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIRKNFAFVQFETMEEARKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T + L+DRVISVEYA +DDSE DRY SPRR R SP YR RPSPDYGR
Sbjct: 147 THATTLLDRVISVEYAFRDDSEVSDRYGSPRR----GGGYGRRGDSPVYRSRPSPDYGRP 202
Query: 122 RSPAYDRYN--GPVYDQRRSPDHGRHRSP 148
SP Y Y+ GPV D+ R R RSP
Sbjct: 203 ASPVYGSYDGPGPVRDRYRRSLAYRSRSP 231
>gi|212722812|ref|NP_001131484.1| uncharacterized protein LOC100192821 [Zea mays]
gi|194691660|gb|ACF79914.1| unknown [Zea mays]
gi|224032781|gb|ACN35466.1| unknown [Zea mays]
gi|413957159|gb|AFW89808.1| arginine/serine-rich splicing factor RSP41 isoform 1 [Zea mays]
gi|413957160|gb|AFW89809.1| arginine/serine-rich splicing factor RSP41 isoform 2 [Zea mays]
gi|413957161|gb|AFW89810.1| arginine/serine-rich splicing factor RSP41 isoform 3 [Zea mays]
Length = 255
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 123/167 (73%), Gaps = 9/167 (5%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+ +PT+TLFVINFDPIRT+ +DI++HFEPYG + ++RIRRNFAFVQ+ETQEEA+ A+++
Sbjct: 87 GDVKPTRTLFVINFDPIRTKVQDIEKHFEPYGKIANIRIRRNFAFVQYETQEEASAAVKN 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDS-PRRGGYGRH--SPYGRSPSPAYRRRPSPDY 118
TD+S ++DRV++VEYA +DD D P++G Y R SPY RSPSP YRR PDY
Sbjct: 147 TDKSTILDRVVTVEYAFRDDDGDRDDRYDIPKQGAYDRRGGSPYMRSPSPRYRRDYVPDY 206
Query: 119 G-RGRSPAYDRYNGPVYDQRRSPDHGRH---RSPV-PVYDRRRSPDY 160
G RGR P Y R +G +Y +RRSP + R+ RSP YDRRRSP Y
Sbjct: 207 GRRGRYPGYGRRDGAMY-ERRSPVYDRYGGGRSPAYDRYDRRRSPGY 252
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+F NFD TR+ D++R F YG + + ++ +AF+ FE + +A A+ D
Sbjct: 4 VFCGNFDH-DTRQYDLERLFSKYGPISRIDMKLGYAFIYFEDERDAEDAIRRLDNVSFGY 62
Query: 69 -DRVISVEYA 77
R +SVE++
Sbjct: 63 NRRRLSVEWS 72
>gi|47680295|gb|AAT37131.1| arginine/serine-rich splicing factor 1 [Zea mays]
gi|47680367|gb|AAT37122.1| arginine/serine-rich splicing factor 1 [Zea mays]
gi|195634831|gb|ACG36884.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 240
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 113/166 (68%), Gaps = 21/166 (12%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFV+FET EEA KALE+
Sbjct: 87 VNTKPTKTLFVINFDPMDTRVSDIERHFAPFGNISSVRIRKNFAFVRFETLEEARKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T + L+DRVISVEYA +DD ER DRYDSPRRGG SPAYR RPSPDYGR
Sbjct: 147 THATMLLDRVISVEYAFRDDDERSDRYDSPRRGGGYGRR----GDSPAYRSRPSPDYGRP 202
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDR-RRSPDYGRNRSP 166
SP Y Y GR RS PV DR RRSP Y R+RSP
Sbjct: 203 ASPVYGSY-------------GRSRS--PVRDRYRRSPAY-RSRSP 232
>gi|116786163|gb|ABK24003.1| unknown [Picea sitchensis]
Length = 289
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/198 (50%), Positives = 116/198 (58%), Gaps = 40/198 (20%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+ +PTKTLFVINFDP TR RD++RHFEPYG VL+VRIRRNFAF+ + TQEEATKA +
Sbjct: 89 VTGLKPTKTLFVINFDPYDTRARDLERHFEPYGKVLNVRIRRNFAFIHYGTQEEATKAFD 148
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG-YGRHSP------------------ 101
+T S L+DRVI+VEYA ++D R SP RGG YGR S
Sbjct: 149 ATHMSTLLDRVITVEYAQREDGNRRGGPSSPIRGGRYGRSSEDHGRDRSASPIYGRRAMR 208
Query: 102 ----YGRSPSPAYRRRP---SPDYGRGRSPAYD-----------RYNGPVYD---QRRSP 140
YGR+PSP Y RRP SPDYGR SP Y R PVY Q+ S
Sbjct: 209 GSPDYGRAPSPTYARRPERCSPDYGRATSPIYSRRPEKHGSDYGRAASPVYASRPQKNSL 268
Query: 141 DHGRHRSPVPVYDRRRSP 158
D+GR SP+ DR RSP
Sbjct: 269 DYGRDASPLLERDRSRSP 286
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K L+ N + R+ +I+R F YG V V ++ +AFV E + +A A+ + D+++
Sbjct: 1 MKPLYCGNIE-YEVRQSEIERLFGKYGRVERVDMKSGYAFVYMEDERDAEDAIRALDKTE 59
Query: 67 L--VDRVISVEYA 77
R ++VE+
Sbjct: 60 FGRQRRRLTVEWT 72
>gi|413917962|gb|AFW57894.1| arginine/serine-rich splicing factor 1 variant 3 [Zea mays]
Length = 223
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 100/148 (67%), Gaps = 17/148 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFV+FET EEA KALE+
Sbjct: 87 VNTKPTKTLFVINFDPMDTRVSDIERHFAPFGNISSVRIRKNFAFVRFETLEEARKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
T + L+DRVISVEYA +DD ER DRYDSPRR R SPAYR RPSPDYGR
Sbjct: 147 THATMLLDRVISVEYAFRDDDERSDRYDSPRR----GGGYGRRGDSPAYRSRPSPDYGRP 202
Query: 122 RSPAYDRYNGPVYDQRRSPDHGRHRSPV 149
SP Y Y GR RSPV
Sbjct: 203 ASPVYGSY-------------GRSRSPV 217
>gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 350
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++++
Sbjct: 93 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASN 152
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
SKL+D+VISVEYA+KDD R + + SP R RSP+P R R SPDYGRG S
Sbjct: 153 NSKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPTPYKRERGSPDYGRGAS 211
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 212 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 251
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR +
Sbjct: 1 MKPVFCGNFE-YDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRFE 59
Query: 67 LV--DRVISVEYA 77
R + VE+
Sbjct: 60 FGRRGRTLRVEWT 72
>gi|148909122|gb|ABR17662.1| unknown [Picea sitchensis]
Length = 337
Score = 152 bits (383), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 131/212 (61%), Gaps = 45/212 (21%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+ + +PTKTLFVINFD T+ DI+RHFEPYG +L+VRIRRNFAFVQ+E QE+ATKALE
Sbjct: 89 VTDLKPTKTLFVINFDSYNTKVEDIERHFEPYGKLLNVRIRRNFAFVQYELQEDATKALE 148
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSP-RRGGYGR----------HSP-------- 101
ST SK++D+V++V+YA ++D +R R SP RRG Y R SP
Sbjct: 149 STHLSKMLDKVLTVKYAQREDGDRRGRRSSPIRRGRYSRAGEDHDRDRSASPLHGRRAVR 208
Query: 102 ----YGRSPSPAYRRRP---SPDYGRG-----------RSPAYDRYNGPVYD---QRRSP 140
YGR+ SP + RRP SPDYGR RSP Y R P+Y +RRSP
Sbjct: 209 GSPDYGRASSPIHGRRPERRSPDYGRAPSPIYARRPERRSPDYGRAPSPIYAKRPERRSP 268
Query: 141 DHGRHRSPVPVYDR---RRSPDYGRNRSPNFG 169
D+G R+P P+Y + RRSPDYGR SP +
Sbjct: 269 DYG--RAPSPIYAKRPERRSPDYGRAASPVYA 298
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 98 RHSP-YGRSPSPAYRRRP---SPDYGRGRSPAYD---RYNGPVYDQRRSPDHGRHRSPVP 150
R SP YGR+PSP Y +RP SPDYGR SP Y + N P Y + SP H + RS P
Sbjct: 265 RRSPDYGRAPSPIYAKRPERRSPDYGRAASPVYASRRQKNSPDYGRVASPVHEQDRSRSP 324
Query: 151 V 151
+
Sbjct: 325 M 325
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K L+ N + TR+ +I+R F YG V V ++ FAF+ E +++A A+ D ++
Sbjct: 1 MKPLYCGNVE-YETRQSEIERLFGKYGKVDRVDMKSGFAFIYMEDEQDAEDAIRGLDSTE 59
Query: 67 LVD--RVISVEYALKDD 81
R +SVE+ D
Sbjct: 60 FGTQRRRLSVEWTKNAD 76
>gi|218189952|gb|EEC72379.1| hypothetical protein OsI_05650 [Oryza sativa Indica Group]
Length = 603
Score = 151 bits (382), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 111/177 (62%), Gaps = 35/177 (19%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
N RPTKTLFVINFDPI TR RD++RHF+ YG + +VRIRRNFAFVQ+E QE+ATKALE T
Sbjct: 414 NTRPTKTLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQYELQEDATKALEGT 473
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRG--------GY-GRH-SPYGRSPSPAYRR 112
+ S L+DRVISVEYAL+DD E+ + Y RRG Y GR SPYGR R
Sbjct: 474 NGSTLMDRVISVEYALRDDDEKRNGYSPERRGRDRSPDRRDYRGRSASPYGRG-----RE 528
Query: 113 RPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
R SPDYGRGR +R SPD+GR R SPDY R SP G
Sbjct: 529 RGSPDYGRGR-------------ERGSPDYGRGGD-------RGSPDYHRGASPQGG 565
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N D R+ +I+R F YG V V ++ FAFV E + +A +A+ DR +
Sbjct: 328 VFCGNLD-YDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEFGR 386
Query: 68 VDRVISVEYALKDDS 82
R + VE+ +D S
Sbjct: 387 KGRRLRVEWTKEDRS 401
>gi|357145457|ref|XP_003573649.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like
[Brachypodium distachyon]
Length = 277
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/184 (52%), Positives = 117/184 (63%), Gaps = 28/184 (15%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+PTKTLFVINFDPI TR RD+++HF+ YG + ++RIRRNFAFVQ+E+QE+ATKAL+ T+
Sbjct: 92 KPTKTLFVINFDPISTRTRDLEKHFDQYGKIANIRIRRNFAFVQYESQEDATKALDGTNG 151
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRH-----------SPYGRSPSPAYRRR 113
S L+DRVISVEYAL+DD E+ + Y RRGG R SPYGR R R
Sbjct: 152 STLMDRVISVEYALRDDDEKRNGYSPERRGGRDRSPDRRDNRGRSGSPYGRG-----RER 206
Query: 114 PSPDYGRGR---SPAYDRYNGPVYDQRRSPDHGRHRSP-VPVYDRRRSPDYGRNR---SP 166
SPDYGRGR SP Y + R SPD+ R SP D RRSP Y R R SP
Sbjct: 207 GSPDYGRGRERGSPDYGKGGA-----RGSPDYVRGGSPYAGKGDERRSPKYDRERREASP 261
Query: 167 NFGR 170
+ R
Sbjct: 262 GYDR 265
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N D R+ +I+R F YG V V I+ FAFV E + +A A+ DR+
Sbjct: 4 IFCGNLD-YDARQSEIERLFSKYGRVERVDIKTGFAFVYMEDERDAEDAIHRLDRTDFGR 62
Query: 68 VDRVISVEYALKDDS 82
R + VE+ +D S
Sbjct: 63 KGRRLRVEWTKEDRS 77
>gi|113205286|gb|ABI34327.1| Arginine/serine-rich splicing factor RSP41, putative [Solanum
demissum]
Length = 373
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/163 (55%), Positives = 114/163 (69%), Gaps = 9/163 (5%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV 68
TLFVINFDP TR R+I+RHF+PYG +L++RIRRNFAFVQ+ETQE+AT+AL++T+ SKL+
Sbjct: 117 TLFVINFDPYSTRSRNIERHFDPYGKILNIRIRRNFAFVQYETQEDATRALDATNMSKLM 176
Query: 69 DRVISVEYALKDDSERDDRYDSPRRG---GYGRHSPYGRSPSPAYRRRPSPDYGRGRSPA 125
D+VI+VEYA KDD +R + + SP R G R GRS SP R R SPDYGRGR+
Sbjct: 177 DQVITVEYANKDDDDRRNGF-SPDRNHDRGLKRGYDRGRSRSPYGRERGSPDYGRGRA-- 233
Query: 126 YDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNF 168
R P+ R SPD+GR S P + R R +YG RSPN
Sbjct: 234 --RSPSPIRQGRSSPDYGRRPSSNPNH-RERDSEYGSGRSPNI 273
>gi|224063963|ref|XP_002301323.1| predicted protein [Populus trichocarpa]
gi|222843049|gb|EEE80596.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/147 (57%), Positives = 100/147 (68%), Gaps = 20/147 (13%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN P+KTLFVINFDPI TR RD++RHF+PYG +L RIRRNFAFVQ+E QE+ATKALE+
Sbjct: 88 ANMTPSKTLFVINFDPIHTRTRDLERHFDPYGKILSTRIRRNFAFVQYELQEDATKALEA 147
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRG-------GYGRHSPYGRSPSPAYRRRP 114
T+ SKL+DRVISVEYA +DD ER + Y RRG Y R RSPSP R R
Sbjct: 148 TNMSKLMDRVISVEYAARDDDERRNGYSPERRGRDRSPDRNYSRE----RSPSPYRRDRG 203
Query: 115 SPDYGRGRSP---------AYDRYNGP 132
SPDYG G++ AY++ GP
Sbjct: 204 SPDYGHGQNTNARPQRGNHAYEKAEGP 230
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG + V ++ FAFV E + +A A+ D+++
Sbjct: 1 MKAIFCGNLD-YDARQSDVERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDQTE 59
Query: 67 L 67
Sbjct: 60 F 60
>gi|222622077|gb|EEE56209.1| hypothetical protein OsJ_05182 [Oryza sativa Japonica Group]
Length = 290
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 109/172 (63%), Gaps = 25/172 (14%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
N RPTKTLFVINFDPI TR RD++RHF+ YG + +VRIRRNFAFVQ+E QE+ATKALE T
Sbjct: 101 NTRPTKTLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQYELQEDATKALEGT 160
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRG---GYGRHSPYGRSPSP--AYRRRPSPD 117
+ S L+DRVISVEYAL+DD E+ + Y RRG R GRS SP R R SPD
Sbjct: 161 NGSTLMDRVISVEYALRDDDEKRNGYSPERRGRDRSPDRRDYRGRSASPYGRGRERGSPD 220
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
YGRGR +R SPD+GR R SPDY R SP G
Sbjct: 221 YGRGR-------------ERGSPDYGRGGD-------RGSPDYHRGASPQGG 252
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N D R+ +I+R F YG V V ++ FAFV E + +A +A+ DR +
Sbjct: 15 VFCGNLD-YDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEFGR 73
Query: 68 VDRVISVEYALKDDS 82
R + VE+ +D S
Sbjct: 74 KGRRLRVEWTKEDRS 88
>gi|326494512|dbj|BAJ90525.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 114/177 (64%), Gaps = 24/177 (13%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+PTKTLFVINFDPI TR RD+++HF+ YG + ++RIRRNFAFVQ+ETQ++ATKAL+ T+
Sbjct: 62 KPTKTLFVINFDPINTRTRDLEKHFDLYGKIANIRIRRNFAFVQYETQKDATKALDGTNG 121
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRH-----------SPYGRS---PSPAY 110
S ++DRVISVEYAL+DD E+ + Y RRGG R SPYGR SP Y
Sbjct: 122 STVMDRVISVEYALRDDDEKRNGYSPDRRGGRDRSPDRRDNRGRSASPYGRGRERGSPDY 181
Query: 111 ---RRRPSPDYGRG---RSPAYDRYNGPV---YDQRRSPDHGRH-RSPVPVYDRRRS 157
R R SPDYG+G SP Y R P D R SP + R R P YDRRRS
Sbjct: 182 GRGRERGSPDYGKGGARDSPDYVRGGSPYGSKGDDRASPKYDRERREASPAYDRRRS 238
>gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|334186916|ref|NP_001190837.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|4033468|sp|P92965.2|RSP40_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP40
gi|2582641|emb|CAA67800.1| splicing factor [Arabidopsis thaliana]
gi|2980800|emb|CAA18176.1| splicing factor At-SRp40 [Arabidopsis thaliana]
gi|332659667|gb|AEE85067.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|332659670|gb|AEE85070.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
Length = 350
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++++
Sbjct: 93 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASN 152
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
SKL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG S
Sbjct: 153 NSKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 211
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 212 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 251
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR
Sbjct: 1 MKPVFCGNFE-YDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDR 57
>gi|115443899|ref|NP_001045729.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|41053015|dbj|BAD07946.1| putative arginine/serine-rich splicing factor RSp41 [Oryza sativa
Japonica Group]
gi|113535260|dbj|BAF07643.1| Os02g0122800 [Oryza sativa Japonica Group]
gi|215768223|dbj|BAH00452.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 109/172 (63%), Gaps = 25/172 (14%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
N RPTKTLFVINFDPI TR RD++RHF+ YG + +VRIRRNFAFVQ+E QE+ATKALE T
Sbjct: 90 NTRPTKTLFVINFDPINTRTRDLERHFDQYGKISNVRIRRNFAFVQYELQEDATKALEGT 149
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRG---GYGRHSPYGRSPSP--AYRRRPSPD 117
+ S L+DRVISVEYAL+DD E+ + Y RRG R GRS SP R R SPD
Sbjct: 150 NGSTLMDRVISVEYALRDDDEKRNGYSPERRGRDRSPDRRDYRGRSASPYGRGRERGSPD 209
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
YGRGR +R SPD+GR R SPDY R SP G
Sbjct: 210 YGRGR-------------ERGSPDYGRGGD-------RGSPDYHRGASPQGG 241
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F N D R+ +I+R F YG V V ++ FAFV E + +A +A+ DR +
Sbjct: 4 VFCGNLD-YDARQSEIERLFSKYGRVERVDMKSGFAFVYMEDERDADEAIHRLDRIEFGR 62
Query: 68 VDRVISVEYALKDDS 82
R + VE+ +D S
Sbjct: 63 KGRRLRVEWTKEDRS 77
>gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|222423494|dbj|BAH19717.1| AT4G25500 [Arabidopsis thaliana]
gi|332659669|gb|AEE85069.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
Length = 317
Score = 149 bits (375), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++++
Sbjct: 60 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASN 119
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
SKL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG S
Sbjct: 120 NSKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 178
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 179 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 218
>gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
gi|332659668|gb|AEE85068.1| arginine/serine-rich-splicing factor RSP40 [Arabidopsis thaliana]
Length = 309
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++++
Sbjct: 52 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASN 111
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
SKL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG S
Sbjct: 112 NSKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 170
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 171 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 210
>gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278 [Arabidopsis lyrata subsp.
lyrata]
gi|297315506|gb|EFH45929.1| hypothetical protein ARALYDRAFT_492278 [Arabidopsis lyrata subsp.
lyrata]
Length = 348
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/164 (56%), Positives = 114/164 (69%), Gaps = 9/164 (5%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P+KTLFVINFD TR RD++RHFEPYG +L+VRIRRNFAF+Q+E QE+AT+AL++T+ S
Sbjct: 95 PSKTLFVINFDADNTRTRDLERHFEPYGKILNVRIRRNFAFIQYEAQEDATRALDATNNS 154
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPA 125
KL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG SP
Sbjct: 155 KLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGASPV 213
Query: 126 YDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR--SPDYGRNRSPN 167
R SPD+GR RSP P Y + R SP+YGR+R N
Sbjct: 214 -----AAYRKDRTSPDYGRRRSPSP-YKKSRCGSPEYGRDRRGN 251
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR
Sbjct: 1 MKPVFCGNFE-YDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDR 57
>gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
Length = 317
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 115/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q++ QE+AT+AL++++
Sbjct: 60 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYKAQEDATRALDASN 119
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
SKL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG S
Sbjct: 120 NSKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 178
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 179 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 218
>gi|300681335|emb|CAZ96065.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 324
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RPTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAFVQFE QE+AT+ALE
Sbjct: 118 TNARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQFEVQEDATRALEG 177
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 178 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 228
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 229 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 260
>gi|226494041|ref|NP_001147698.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195613160|gb|ACG28410.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|195655913|gb|ACG47424.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAF+QFE QE+AT+ALE
Sbjct: 89 TNTKPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQFEVQEDATRALEG 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 149 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 199
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 200 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 231
>gi|223973269|gb|ACN30822.1| unknown [Zea mays]
gi|413935349|gb|AFW69900.1| hypothetical protein ZEAMMB73_675088 [Zea mays]
gi|413935350|gb|AFW69901.1| hypothetical protein ZEAMMB73_675088 [Zea mays]
Length = 238
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAF+QFE QE+AT+ALE
Sbjct: 48 TNTKPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQFEIQEDATRALEG 107
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 108 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 158
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 159 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 190
>gi|194696906|gb|ACF82537.1| unknown [Zea mays]
gi|413935351|gb|AFW69902.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 279
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 112/172 (65%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAF+QFE QE+AT+ALE
Sbjct: 89 TNTKPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQFEIQEDATRALEG 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 149 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 199
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 200 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 231
>gi|300681351|emb|CAZ96098.1| arginine/serine-rich splicing factor [Saccharum hybrid cultivar
R570]
Length = 315
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 112/172 (65%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RPTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAFVQFE QE+AT+ALE
Sbjct: 118 TNARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQFEVQEDATRALEG 177
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 178 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 228
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 229 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 260
>gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 114/165 (69%), Gaps = 7/165 (4%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
RP+KTLFVINFD TR RD+++HFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++++
Sbjct: 92 MRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASN 151
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
KL+D+VISVEYA+KDD R + + SP R RSPSP R R SPDYGRG S
Sbjct: 152 NRKLMDKVISVEYAVKDDDARGNGH-SPERRRDRSPERRRRSPSPYKRERGSPDYGRGAS 210
Query: 124 PAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR-SPDYGRNRSPN 167
P +R SPD+GR RSP P RR SP+YGR+R N
Sbjct: 211 PV-----AAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRDRRGN 250
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR
Sbjct: 1 KPVFCGNFE-YDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDR 56
>gi|242063870|ref|XP_002453224.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|241933055|gb|EES06200.1| hypothetical protein SORBIDRAFT_04g001910 [Sorghum bicolor]
gi|448878270|gb|AGE46098.1| arginine/serine-rich splicing factor RS34 [Sorghum bicolor]
Length = 295
Score = 145 bits (366), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 111/172 (64%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
RPTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAFVQFE QE+AT+ALE
Sbjct: 89 TQARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQFEVQEDATRALEG 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 149 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 199
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 200 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 231
>gi|300681317|emb|CAZ96031.1| arginine/serine-rich splicing factor [Sorghum bicolor]
Length = 324
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 111/172 (64%), Gaps = 32/172 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
RPTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAFVQFE QE+AT+ALE
Sbjct: 118 TQARPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFVQFEVQEDATRALEG 177
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
T+ S +DRVISVEYAL+DD E+ +R + +SP GR SP RR PSP YG
Sbjct: 178 TNGSHFMDRVISVEYALRDDDEKGERGNG--------YSPDRRGRERSPGRRRSPSP-YG 228
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPNFGR 170
RGR +R SPD+GR + R SPDYGR RSP+ GR
Sbjct: 229 RGR-------------ERGSPDYGRSKE-------RGSPDYGRGGRSPDNGR 260
>gi|326509639|dbj|BAJ87035.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 121/200 (60%), Gaps = 47/200 (23%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
A+ +PT+TLFVINFDP+RT+ DI+RHF+PYG + ++RIR+NFAFVQ+E QE+A+ A+
Sbjct: 88 ADAKPTRTLFVINFDPVRTKVVDIERHFQPYGKIANIRIRKNFAFVQYEMQEDASVAVNK 147
Query: 62 TDRSKLVDRVISVEYALKDDSE------------RD---------DRYDSPRRGG--YGR 98
TD+S ++DRV++VEYA +DD RD DRY SPRRGG YG
Sbjct: 148 TDKSTILDRVVTVEYAFRDDDNERDDRHGSPRQGRDRYGSPRRGGDRYGSPRRGGDRYGS 207
Query: 99 -------HSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
PY RSPSP YRR SPDY R P YDR G Y GR RS PV
Sbjct: 208 PKRANQGRRPYERSPSPRYRRDYSPDY--DRRPCYDRQYGAPY--------GRSRS--PV 255
Query: 152 YDRRRSPDYGRNRSPNFGRY 171
YDR Y R RSP +GRY
Sbjct: 256 YDR-----YERGRSPGYGRY 270
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F NFD TR+ D++R F YG + + I+ +AFV F+ + +A A+ ++
Sbjct: 4 VFCGNFD-YETRQSDLERLFSKYGPIRRIDIKSGYAFVYFQDERDAEDAIRRLSNAEFGH 62
Query: 70 --RVISVEYALKDD 81
R +SVE++ +++
Sbjct: 63 SRRRLSVEWSRQEE 76
>gi|162457883|ref|NP_001105264.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680375|gb|AAT37129.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
Length = 193
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/112 (67%), Positives = 88/112 (78%), Gaps = 2/112 (1%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +PT+TLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KALE+
Sbjct: 80 ANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIRKNFAFVQFETMEEARKALEA 139
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRR-GGYGRHSPYGRSPSPAYRR 112
T + L+DRVISVEYA +DDSE DRY SPRR GGYG + RSP PA RR
Sbjct: 140 THATTLLDRVISVEYAFRDDSEVSDRYGSPRRGGGYGSLAYRSRSP-PAKRR 190
>gi|357114378|ref|XP_003558977.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like
[Brachypodium distachyon]
Length = 286
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 120/207 (57%), Gaps = 52/207 (25%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+ +PT+TLFVINFDP+RT+ +DI+RHFEPYG + ++RIR+NFAFV++ETQEEA+ A++
Sbjct: 86 TGDAKPTRTLFVINFDPLRTKIQDIERHFEPYGKISNIRIRKNFAFVRYETQEEASVAVK 145
Query: 61 STDRSKLVDRVISVEYALKDDSER-----------DDRYDSPRRG--------------- 94
TD+S ++DRV++VEYA +DD DDRY SPRRG
Sbjct: 146 HTDKSSILDRVLTVEYAFRDDDNERDDRYSSPKRGDDRYSSPRRGDDRYVSTRRGDDRYV 205
Query: 95 -----------------GYGRHSPYGRSPSPAYRRRPSPDYG-RGRSPAYDRYNGPVYDQ 136
G R SPY RSPSP YRR SPDY R R+ YDR
Sbjct: 206 SPRRGDNRYGSPKRAERGRARGSPYMRSPSPRYRRDYSPDYDRRPRNAGYDR-------P 258
Query: 137 RRSPDHGRHRSPVPV-YDRRRSPDYGR 162
R +GR RSPV YDR RSP YGR
Sbjct: 259 REGAPYGRSRSPVYARYDRGRSPGYGR 285
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
+F NFD TR+ D++R F +G + + ++ +AF+ FE + +A A++ +
Sbjct: 4 VFCGNFD-YDTRQADLERLFSKHGRIARIDMKSGYAFIYFEDERDAEDAIKRLANADFGY 62
Query: 69 -DRVISVEYA 77
R +SVE++
Sbjct: 63 NRRRLSVEWS 72
>gi|356505098|ref|XP_003521329.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
max]
Length = 252
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 121/169 (71%), Gaps = 19/169 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N RP+KTLFVINFDP+ R RD++RHF+ YG +L++RIRRNFAF+QFE+QE+AT+ALE+
Sbjct: 90 SNSRPSKTLFVINFDPVNARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERD-------DR--YDSPRRGGYGRHSPYGRSPSPAYRR 112
T+ SK +DRVI+VEYA++DD +RD DR +DSP G YGR GRSPSP R
Sbjct: 150 TNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSP-DGRYGR----GRSPSPYRRG 204
Query: 113 RPSPDYGRGRSPAY--DRYNGPVYDQRRSPDHGRH--RSPVPVYDRRRS 157
R SPDYG G +P+ + P YD+ SP +GR+ RSP P DR RS
Sbjct: 205 RGSPDYGHGSNPSSRPEPRGSPKYDRAESPINGRYDSRSP-PPRDRSRS 252
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG V V ++ FAFV E + +A A+ DR++
Sbjct: 1 MKPVFCGNLD-FDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTE 59
Query: 67 L--VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS 107
R I VE+ + ERD R R GG R S PS
Sbjct: 60 FGRKGRRIRVEWTKQ---ERDSR----RSGGDSRKSSSNSRPS 95
>gi|296089073|emb|CBI38776.3| unnamed protein product [Vitis vinifera]
Length = 225
Score = 142 bits (359), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 106/164 (64%), Gaps = 18/164 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +P+KTLFVINFDPI TR RD++RHF+ YG +L++RIRRNFAF+QFE+QE+ATKAL++
Sbjct: 62 ANMKPSKTLFVINFDPIHTRTRDLERHFDLYGKILNIRIRRNFAFIQFESQEDATKALDA 121
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYG-----RHSPYGRSPSPAYRRRPSP 116
T+ SK +DRVISVEYA +DD + SP R G R GRSPSP +R R SP
Sbjct: 122 TNMSKFMDRVISVEYAARDDDDDRRNGYSPERRGRDMSPDRRSHDRGRSPSPYHRDRASP 181
Query: 117 DYGRGR----------SPAYDRYNGPV---YDQRRSPDHGRHRS 147
DYG G SP YDR PV Y R P R RS
Sbjct: 182 DYGHGANANSRSEPRGSPNYDRDESPVNERYHSRSPPPRERSRS 225
>gi|225453750|ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
vinifera]
Length = 252
Score = 142 bits (358), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 106/164 (64%), Gaps = 18/164 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +P+KTLFVINFDPI TR RD++RHF+ YG +L++RIRRNFAF+QFE+QE+ATKAL++
Sbjct: 89 ANMKPSKTLFVINFDPIHTRTRDLERHFDLYGKILNIRIRRNFAFIQFESQEDATKALDA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYG-----RHSPYGRSPSPAYRRRPSP 116
T+ SK +DRVISVEYA +DD + SP R G R GRSPSP +R R SP
Sbjct: 149 TNMSKFMDRVISVEYAARDDDDDRRNGYSPERRGRDMSPDRRSHDRGRSPSPYHRDRASP 208
Query: 117 DYGRGR----------SPAYDRYNGPV---YDQRRSPDHGRHRS 147
DYG G SP YDR PV Y R P R RS
Sbjct: 209 DYGHGANANSRSEPRGSPNYDRDESPVNERYHSRSPPPRERSRS 252
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N + R+ D++R F YG V V ++ FAFV + + +A A+ DR+
Sbjct: 1 MKPIFCGNLE-YDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTV 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 60 FGRKGRQLRVEWTKQE 75
>gi|195615816|gb|ACG29738.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
gi|223947499|gb|ACN27833.1| unknown [Zea mays]
gi|413926667|gb|AFW66599.1| arginine/serine-rich splicing factor RSP41 [Zea mays]
Length = 270
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 110/169 (65%), Gaps = 31/169 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAF+QFE QE+AT+ALE
Sbjct: 72 TNAKPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQFEAQEDATRALEG 131
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
+ S +DRVISVEYAL+DD E+ +R + GY SP GR SP RR PSP YG
Sbjct: 132 ANGSHFMDRVISVEYALRDDDEKGERATN----GY---SPDRRGRERSPGARRSPSP-YG 183
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPN 167
RGR +R SPD+GR + R SPDYGR RSP+
Sbjct: 184 RGR-------------ERGSPDYGRGKE-------RGSPDYGRGGRSPD 212
>gi|212722462|ref|NP_001132395.1| hypothetical protein [Zea mays]
gi|194694266|gb|ACF81217.1| unknown [Zea mays]
gi|413926669|gb|AFW66601.1| hypothetical protein ZEAMMB73_609363 [Zea mays]
Length = 287
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 110/169 (65%), Gaps = 31/169 (18%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N +PTKTLFVINFDPI TR RD++RHF+ YG V +VRI++NFAF+QFE QE+AT+ALE
Sbjct: 89 TNAKPTKTLFVINFDPINTRIRDLERHFDKYGRVANVRIKKNFAFIQFEAQEDATRALEG 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYG 119
+ S +DRVISVEYAL+DD E+ +R + GY SP GR SP RR PSP YG
Sbjct: 149 ANGSHFMDRVISVEYALRDDDEKGERATN----GY---SPDRRGRERSPGARRSPSP-YG 200
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR-NRSPN 167
RGR +R SPD+GR + R SPDYGR RSP+
Sbjct: 201 RGR-------------ERGSPDYGRGKE-------RGSPDYGRGGRSPD 229
>gi|302809591|ref|XP_002986488.1| hypothetical protein SELMODRAFT_124209 [Selaginella moellendorffii]
gi|300145671|gb|EFJ12345.1| hypothetical protein SELMODRAFT_124209 [Selaginella moellendorffii]
Length = 214
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 91/122 (74%), Gaps = 14/122 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+ QRPTKTLFV+NFDPI TR RD++RHFEPYG ++ V+IR+NFAFVQ+E+QEEATKALE
Sbjct: 89 ITKQRPTKTLFVVNFDPINTRTRDLERHFEPYGKLVRVQIRKNFAFVQYESQEEATKALE 148
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
ST SK+VDRVISVEYA +++ D P RG RSPSP +R R SPDYG
Sbjct: 149 STHLSKVVDRVISVEYAARENG------DPPGRG--------RRSPSPRHRSRGSPDYGG 194
Query: 121 GR 122
GR
Sbjct: 195 GR 196
>gi|302762969|ref|XP_002964906.1| hypothetical protein SELMODRAFT_82477 [Selaginella moellendorffii]
gi|300167139|gb|EFJ33744.1| hypothetical protein SELMODRAFT_82477 [Selaginella moellendorffii]
Length = 214
Score = 141 bits (356), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 91/122 (74%), Gaps = 14/122 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
+ QRPTKTLFV+NFDPI TR RD++RHFEPYG ++ V+IR+NFAFVQ+E+QEEATKALE
Sbjct: 89 ITKQRPTKTLFVVNFDPINTRTRDLERHFEPYGKLVRVQIRKNFAFVQYESQEEATKALE 148
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
ST SK+VDRVISVEYA +++ D P RG RSPSP +R R SPDYG
Sbjct: 149 STHLSKVVDRVISVEYAARENG------DPPGRG--------RRSPSPRHRSRGSPDYGG 194
Query: 121 GR 122
GR
Sbjct: 195 GR 196
>gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT_495275 [Arabidopsis lyrata subsp.
lyrata]
gi|297309983|gb|EFH40407.1| hypothetical protein ARALYDRAFT_495275 [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 110/157 (70%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E+QE+AT+AL++T+ SKL
Sbjct: 96 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYESQEDATRALDATNSSKL 155
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 156 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 214
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 215 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 245
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE D++R F+ YG V V ++ FAFV E + +A A+ + DR +
Sbjct: 1 MKPVFCGNFE-YDARESDLERLFKRYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ D
Sbjct: 60 YGRTGRRLRVEWTKND 75
>gi|224136870|ref|XP_002322436.1| predicted protein [Populus trichocarpa]
gi|222869432|gb|EEF06563.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 112/167 (67%), Gaps = 11/167 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP+KTLFVINFDP TR +D++RHFEPYG ++ VRIRRNFAFVQ+E QE+ATKAL++
Sbjct: 89 TNTRPSKTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP---YGRSPSPAYRRRPSPDY 118
T+ SKL+DRVISVEYA++DD ER D Y R RSPSP R R SPDY
Sbjct: 149 TNLSKLLDRVISVEYAVRDDDERKDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDY 208
Query: 119 GRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRS 165
GRG S P +R SPD+GR RSP P R SPDYGR S
Sbjct: 209 GRGPS--------PYRKERGSPDYGRRRSPSPYRRDRASPDYGRGTS 247
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F NF+ R+ +++R F+ YG V V ++ FAF+ E + +A A+ DR +
Sbjct: 4 IFCGNFE-YDARQTELERLFKRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRVEFGR 62
Query: 68 VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 63 KGRRLRVEWTKQE 75
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 37/70 (52%), Gaps = 16/70 (22%)
Query: 95 GYGR---HSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
G+GR HSPYGR RP+PD GRG S + P SP++G+ RSP +
Sbjct: 281 GHGRGSSHSPYGRE-------RPNPDNGRGSSRS------PTERDGDSPENGQLRSPSSI 327
Query: 152 YDRRRSPDYG 161
D R SP+ G
Sbjct: 328 PDERDSPNGG 337
>gi|238481546|ref|NP_001154774.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
gi|332008782|gb|AED96165.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
Length = 324
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++T+ SKL
Sbjct: 63 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 122
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 123 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 181
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 182 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 212
>gi|414588138|tpg|DAA38709.1| TPA: hypothetical protein ZEAMMB73_778058 [Zea mays]
Length = 211
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 78/94 (82%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN +PT+TLFVINFDP+ TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KALE+
Sbjct: 87 ANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIRKNFAFVQFETMEEARKALEA 146
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
T + L+DRVISVEYA +DDSE DRY SPRRGG
Sbjct: 147 THATTLLDRVISVEYAFRDDSEVSDRYGSPRRGG 180
>gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
gi|21542447|sp|P92966.2|RSP41_ARATH RecName: Full=Arginine/serine-rich-splicing factor RSP41
gi|13877817|gb|AAK43986.1|AF370171_1 putative arginine/serine-rich splicing factor RSP41 homolog
[Arabidopsis thaliana]
gi|10177739|dbj|BAB11052.1| arginine/serine-rich splicing factor RSP41 homolog [Arabidopsis
thaliana]
gi|16323490|gb|AAL15239.1| putative arginine/serine-rich splicing factor RSP41 homolog
[Arabidopsis thaliana]
gi|332008779|gb|AED96162.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
Length = 356
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++T+ SKL
Sbjct: 96 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 155
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 156 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 214
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 215 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 245
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR +
Sbjct: 1 MKPVFCGNFE-YDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ D
Sbjct: 60 YGRTGRRLRVEWTKND 75
>gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
gi|332008780|gb|AED96163.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
Length = 357
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++T+ SKL
Sbjct: 96 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 155
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 156 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 214
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 215 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 245
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR +
Sbjct: 1 MKPVFCGNFE-YDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ D
Sbjct: 60 YGRTGRRLRVEWTKND 75
>gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana]
Length = 323
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++T+ SKL
Sbjct: 63 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 122
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 123 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 181
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 182 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 212
>gi|388494018|gb|AFK35075.1| unknown [Lotus japonicus]
Length = 249
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 117/166 (70%), Gaps = 15/166 (9%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N +P+KTLF+INFDP+ TR RD++RHF+PYG + ++RIRRNFAF+Q+E+ E+AT+ALE+
Sbjct: 89 SNMKPSKTLFIINFDPVHTRTRDLERHFDPYGKISNIRIRRNFAFIQYESLEDATRALEA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRR------GGYGRHSPYGRSPSPAYRRRPS 115
T+ SK +DRVI+VEYA++DD +R D RR G YGR GRSPSP R R S
Sbjct: 149 TNLSKFMDRVITVEYAIRDDDDRRDGQSPDRRGRVSPDGRYGR----GRSPSPYRRGRGS 204
Query: 116 PDYGRGRSPAY--DRYNGPVYDQRRSPDHGRH--RSPVPVYDRRRS 157
PDYG G +PA + P Y++ SP +GR+ RSP P DR RS
Sbjct: 205 PDYGHGSNPASRPEPRGSPKYERAESPQNGRYDSRSP-PPRDRSRS 249
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG V V ++ FAFV E + +A A+ DR++
Sbjct: 1 MKPVFCGNLD-FDARQSDVERLFRRYGKVERVDMKSGFAFVYMEDERDAEYAIRRLDRTE 59
Query: 67 L--VDRVISVEYALKDDSERDDR 87
R I VE+ + ERD R
Sbjct: 60 FGRKGRRIRVEWTKQ---ERDSR 79
>gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
gi|332008781|gb|AED96164.1| arginine/serine-rich-splicing factor RSP41 [Arabidopsis thaliana]
Length = 329
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRNFAF+Q+E QE+AT+AL++T+ SKL
Sbjct: 69 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKL 128
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 129 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 187
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 188 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 218
>gi|357444075|ref|XP_003592315.1| Arginine/serine-rich-splicing factor RSP40 [Medicago truncatula]
gi|355481363|gb|AES62566.1| Arginine/serine-rich-splicing factor RSP40 [Medicago truncatula]
Length = 430
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 111/176 (63%), Gaps = 35/176 (19%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINFD +TR RD++RHFEPYG ++ VRIR+NFAFVQ+E++++A KALE+
Sbjct: 132 ANARPSKTLFVINFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEA 191
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP-------------YGRSPSP 108
T+ SKL+DRVISVE+A +DD R+ HSP RSPSP
Sbjct: 192 TNNSKLMDRVISVEFAARDDDRRNG------------HSPDRGRDRQRDRSRDGRRSPSP 239
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGR--HRSPVPVYDRRRSPDYGR 162
R R SPDYGRG SP Y R +R SPD+GR RS P R SP YGR
Sbjct: 240 YRRERGSPDYGRGPSP-YKR-------ERSSPDYGRGNSRSRSPHRRERGSPAYGR 287
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE +++R F YG V V ++ FAF+ E + +A A+ + DR +
Sbjct: 43 MKAIFCGNFE-YDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAAIRALDRIE 101
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 102 FGRKGRRLRVEWTKQE 117
>gi|388508248|gb|AFK42190.1| unknown [Medicago truncatula]
Length = 388
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 112/176 (63%), Gaps = 35/176 (19%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINFD +TR RD++RHFEPYG ++ VRIR+NFAFVQ+E++++A KALE+
Sbjct: 90 ANARPSKTLFVINFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP-------------YGRSPSP 108
T+ SKL+DRVISVE+A +DD RR G HSP RSPSP
Sbjct: 150 TNNSKLMDRVISVEFAARDDD---------RRNG---HSPDRGRDRQRDRSRDGRRSPSP 197
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGR--HRSPVPVYDRRRSPDYGR 162
R R SPDYGRG SP Y R +R SPD+GR RS P R SP YGR
Sbjct: 198 YRRERGSPDYGRGPSP-YKR-------ERSSPDYGRGNSRSRSPHRRERGSPAYGR 245
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE +++R F YG V V ++ FAF+ E + +A + + DR +
Sbjct: 1 MKAIFCGNFE-YDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAVIRALDRIE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 60 FGRKGRRLRVEWTKQE 75
>gi|356520473|ref|XP_003528886.1| PREDICTED: arginine/serine-rich-splicing factor RSP41-like [Glycine
max]
Length = 253
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/163 (55%), Positives = 118/163 (72%), Gaps = 19/163 (11%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N RP+KTLFVINFDP+ R RD++RHF+ YG +L++RIRRNFAF+QFE+QE+AT+ALE+
Sbjct: 90 SNSRPSKTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERD-------DR--YDSPRRGGYGRHSPYGRSPSPAYRR 112
T+ SK +DRVI+VEYA++DD +RD DR +DSP G YGR GRSPSP R
Sbjct: 150 TNLSKFMDRVITVEYAIRDDDDRDRRNGYSPDRRGHDSP-DGRYGR----GRSPSPYRRG 204
Query: 113 RPSPDYGRGRSPAY--DRYNGPVYDQRRSP-DHGRH--RSPVP 150
R SPDYG G +P+ D P Y++ SP ++GR+ RSP P
Sbjct: 205 RGSPDYGHGSNPSSRPDPRGSPKYERAESPINNGRYDSRSPPP 247
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG V V ++ FAFV E + +A A+ DR++
Sbjct: 1 MKPVFCGNLD-FDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTE 59
Query: 67 L--VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS 107
R I VE+ + ERD R R GG R S PS
Sbjct: 60 FGRKGRRIRVEWTKQ---ERDSR----RSGGDSRKSSSNSRPS 95
>gi|224120150|ref|XP_002318257.1| predicted protein [Populus trichocarpa]
gi|222858930|gb|EEE96477.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 110/171 (64%), Gaps = 13/171 (7%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINFDP TR +D++RHFEPYG ++ VRIRRNFAFVQ+E QE+ATKAL++
Sbjct: 89 ANTRPSKTLFVINFDPHHTRTKDLERHFEPYGRIVSVRIRRNFAFVQYEAQEDATKALDA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP---YGRSPSPAYRRRPSPDY 118
T+ SKL+ RVISVEYA +DD ER D + R RSPSP R R S DY
Sbjct: 149 TNMSKLLYRVISVEYAARDDGERKDGHSPDRSRDRSPDRRGHDRRRSPSPYRRERGSTDY 208
Query: 119 GRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGR--NRSPN 167
G G S P +R SPD G RSP P R SPDYGR RSP+
Sbjct: 209 GHGPS--------PYRKERVSPDSGCRRSPSPYRRDRASPDYGRGSTRSPS 251
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
+++F NF+ R+ +++R F+ YG V V ++ FAF+ E + +A A+ DR +
Sbjct: 1 MRSIFCGNFE-YDARQTELERLFKRYGRVERVDMKAGFAFIYMEDERDAEDAIRGLDRVE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ ++
Sbjct: 60 FGRKGRRLHVEWTKQE 75
>gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana]
Length = 356
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 109/157 (69%), Gaps = 8/157 (5%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
KTLFVINFD TR RD++RHFEPYG +++VRIRRN+AF+Q+E QE+AT+AL++T+ SKL
Sbjct: 96 KTLFVINFDAQNTRTRDLERHFEPYGKIVNVRIRRNYAFIQYEAQEDATRALDATNSSKL 155
Query: 68 VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYD 127
+D+VISVEYA+KDD R + Y SP R RSPSP R R SPDYGRG SP
Sbjct: 156 MDKVISVEYAVKDDDSRGNGY-SPERRRDRSPDRRRRSPSPYRRERGSPDYGRGASPVAH 214
Query: 128 RYNGPVYDQRRSPDHGR-HRSPVPVYDRRRSPDYGRN 163
+ +R SPD+GR RSP P R SPDY R+
Sbjct: 215 KR------ERTSPDYGRGRRSPSPYKRARLSPDYKRD 245
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F NF+ RE D++R F YG V V ++ FAFV E + +A A+ + DR +
Sbjct: 1 MKPVFCGNFE-YDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFE 59
Query: 67 L--VDRVISVEYALKD 80
R + VE+ D
Sbjct: 60 YGRTGRRLRVEWTKND 75
>gi|217071906|gb|ACJ84313.1| unknown [Medicago truncatula]
Length = 289
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/161 (52%), Positives = 105/161 (65%), Gaps = 33/161 (20%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINFD +TR RD++RHFEPYG ++ VRIR+NFAFVQ+E++++A KALE+
Sbjct: 90 ANARPSKTLFVINFDTYQTRTRDLERHFEPYGKIVSVRIRKNFAFVQYESEDDACKALEA 149
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP-------------YGRSPSP 108
T+ SKL+DRVISVE+A +DD RR G HSP RSPSP
Sbjct: 150 TNNSKLMDRVISVEFAARDDD---------RRNG---HSPDRGRDRQRDRSRDGRRSPSP 197
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPV 149
R R SPDYGRG SP Y R +R SPD+GR + V
Sbjct: 198 YRRERGSPDYGRGPSP-YKR-------ERSSPDYGRGTAVV 230
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K +F NF+ RE +++R F YG V V ++ FAF+ E + +A + + DR
Sbjct: 1 MKAIFCGNFE-YDCRESELERLFRRYGKVDRVDMKAGFAFIYMEDERDAEAVIRALDR 57
>gi|356575923|ref|XP_003556085.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Glycine
max]
Length = 376
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/144 (56%), Positives = 104/144 (72%), Gaps = 10/144 (6%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINFD TR RD++RHFEPYG ++ VRIRRNFAFVQ+E++++A++ALE+
Sbjct: 94 ANGRPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEA 153
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY--DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYG 119
T+ SKL+DRVISVE+A+KDD +R + Y + R R RSPSP R R SPDYG
Sbjct: 154 TNMSKLLDRVISVEFAVKDDDDRRNGYSPERGRDRHRDRSRDGRRSPSPYRRERGSPDYG 213
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHG 143
RG SP Y R +R SPD+G
Sbjct: 214 RGPSP-YQR-------ERGSPDYG 229
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
Q + +F NF+ R+ +++R F YG V V ++ FAF+ E + +A A+ +
Sbjct: 2 QQGKMRPIFCGNFE-YDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRAL 60
Query: 63 DRSKL--VDRVISVEYA 77
DR + R + VE+
Sbjct: 61 DRVEFGRKGRRLRVEWT 77
>gi|297741108|emb|CBI31839.3| unnamed protein product [Vitis vinifera]
Length = 196
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/128 (58%), Positives = 93/128 (72%), Gaps = 7/128 (5%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N RP KTLFVINFDP TR RD++RHF+PYG +L++RIRRNFAF+Q+E+QE+AT+ALE+
Sbjct: 67 TNLRPAKTLFVINFDPYNTRTRDLERHFDPYGKILNIRIRRNFAFIQYESQEDATRALEA 126
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRY--DSPRRGGYGRHSPYGRSPSPA-YRR----RP 114
T+ SKL+DRVISVEYA++DD ER + Y D RR R PS + YR R
Sbjct: 127 TNMSKLMDRVISVEYAVRDDDERRNGYSPDGRRRDKERTSHDSARGPSRSPYRSERSDRA 186
Query: 115 SPDYGRGR 122
PDYGRGR
Sbjct: 187 IPDYGRGR 194
>gi|168038912|ref|XP_001771943.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676725|gb|EDQ63204.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878393|gb|AGE46159.1| arginine/serine-rich splicing factor RS27 transcript I
[Physcomitrella patens subsp. patens]
Length = 233
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 103/165 (62%), Gaps = 37/165 (22%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
RP+KTLFV+NFDPI TR RD++RHFEPYG ++ V+IR+NF FVQ+ETQ+EATKALEST+
Sbjct: 97 RPSKTLFVVNFDPINTRVRDLERHFEPYGKLVRVQIRKNFGFVQYETQDEATKALESTNM 156
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSP 124
SK++DRVI+VEYA ++D E P GRG SP
Sbjct: 157 SKVMDRVITVEYAAREDGE-------------------------------PPSSGRGGSP 185
Query: 125 AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRS-PDYGRNRSPNF 168
+ RY G R SP +GR RSPV R RS P GR+RSP++
Sbjct: 186 S--RYRG---SSRGSPSYGRDRSPVRGSGRNRSPPARGRSRSPDY 225
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
++ NF+ R+ +I+R F+ YG V V ++ F+F+ E + +A A+ D +
Sbjct: 8 VYCGNFE-YDARQSEIERLFKEYGRVERVDMKTGFSFIYMEDERDAEDAIRHLDNMEFGR 66
Query: 68 VDRVISVEYALKDD 81
R +SVE+A + D
Sbjct: 67 QRRRLSVEWAKQGD 80
>gi|224130148|ref|XP_002320764.1| predicted protein [Populus trichocarpa]
gi|222861537|gb|EEE99079.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
N P+KTLFVINFDP+ TR RD++RHF+P+G +L RIRRNFAFVQ+E QE+ATKALE+
Sbjct: 89 TNTTPSKTLFVINFDPVHTRTRDLERHFDPHGKILSTRIRRNFAFVQYELQEDATKALEA 148
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYG--RSPSPAYRRRPSPDYG 119
TD SK +DRVISVEYA +DD R+ R Y RSPSP R R SPDYG
Sbjct: 149 TDMSKFMDRVISVEYAARDDERRNGYSPERRDRDRSPDRNYNRERSPSPDRRDRGSPDYG 208
Query: 120 RGRSPAYDR---YNGPVYDQRRSPDHGRHR 146
RS R YD+ SP++ R+R
Sbjct: 209 H-RSKTNSRPEPRGNHNYDKAESPENERYR 237
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG + V ++ FAFV E + +A A+ DR++
Sbjct: 1 MKAIFCGNLD-YDARQSDLERLFRRYGRIDRVDMKSGFAFVYMEDERDAEDAIRRLDRAE 59
Query: 67 L 67
Sbjct: 60 F 60
>gi|358248400|ref|NP_001240131.1| uncharacterized protein LOC100796509 [Glycine max]
gi|255636874|gb|ACU18770.1| unknown [Glycine max]
Length = 374
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 122/215 (56%), Gaps = 55/215 (25%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
RP+KTLFVINFD TR RD++RHFEPYG ++ VRIRRNFAFVQ+E++++A++ALE+T+
Sbjct: 97 RPSKTLFVINFDTYHTRTRDLERHFEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNM 156
Query: 65 SKLVDRVISVEYALKDDSERDDRYD-------------------SPRRGGYGRHSP-YGR 104
SKL+DRVISVE+A+KDD +R + Y SP R R SP YGR
Sbjct: 157 SKLLDRVISVEFAVKDDDDRRNGYSPERGRDRQRDRSRDGRRSPSPYR--KERGSPDYGR 214
Query: 105 SPSPAYRRRPSPDYGRGR------------SPAYDR-----------YNGPVYDQRRSP- 140
PSP R R SPDYGR R SPAY R + PV D RSP
Sbjct: 215 GPSPYQRERGSPDYGRDRSRSRSPPRRERASPAYGRRSISPYRREREGSEPVRDSSRSPY 274
Query: 141 -------DHGRHRSPVPVYDRRRSPD--YGRNRSP 166
DHG S P R+SP +G +RSP
Sbjct: 275 HKERGRTDHGISPSQSPEGRGRKSPQNGHGSSRSP 309
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
Q + +F NF+ R+ +++R F YG V V ++ FAF+ E + +A A+ +
Sbjct: 2 QQGKMRPIFCGNFE-YDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRAL 60
Query: 63 DRSKL--VDRVISVEYA 77
DR + R + VE+
Sbjct: 61 DRVEFGRKGRRLRVEWT 77
>gi|194693536|gb|ACF80852.1| unknown [Zea mays]
gi|194699312|gb|ACF83740.1| unknown [Zea mays]
gi|414588140|tpg|DAA38711.1| TPA: arginine/serine-rich splicing factor 2 variant 1 isoform 1
[Zea mays]
gi|414588141|tpg|DAA38712.1| TPA: hypothetical protein ZEAMMB73_778058 [Zea mays]
Length = 137
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/134 (61%), Positives = 94/134 (70%), Gaps = 8/134 (5%)
Query: 18 IRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ TR DI+RHF P+GN+ VRIR+NFAFVQFET EEA KALE+T + L+DRVISVEYA
Sbjct: 1 MNTRVSDIERHFTPFGNISSVRIRKNFAFVQFETMEEARKALEATHATTLLDRVISVEYA 60
Query: 78 LKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYN--GPVYD 135
+DDSE DRY SPRRGG SP YR RPSPDYGR SP Y Y+ GPV D
Sbjct: 61 FRDDSEVSDRYGSPRRGGGYGRR----GDSPVYRSRPSPDYGRPASPVYGSYDGPGPVRD 116
Query: 136 Q-RRSPDHGRHRSP 148
+ RRSP + R RSP
Sbjct: 117 RYRRSPAY-RSRSP 129
>gi|194698618|gb|ACF83393.1| unknown [Zea mays]
Length = 138
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/148 (59%), Positives = 98/148 (66%), Gaps = 21/148 (14%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79
TR DI+RHF P+GN+ VRIR+NFAFV+FET EEA KALE+T + L+DRVISVEYA +
Sbjct: 3 TRVSDIERHFAPFGNISSVRIRKNFAFVRFETLEEARKALEATHATMLLDRVISVEYAFR 62
Query: 80 DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRS 139
DD ER DRYDSPRRGG SPAYR RPSPDYGR SP Y Y
Sbjct: 63 DDDERSDRYDSPRRGGGYGRR----GDSPAYRSRPSPDYGRPASPVYGSY---------- 108
Query: 140 PDHGRHRSPVPVYDR-RRSPDYGRNRSP 166
GR RS PV DR RRSP Y R+RSP
Sbjct: 109 ---GRSRS--PVRDRYRRSPAY-RSRSP 130
>gi|413917963|gb|AFW57895.1| hypothetical protein ZEAMMB73_539697 [Zea mays]
gi|413917964|gb|AFW57896.1| hypothetical protein ZEAMMB73_539697 [Zea mays]
gi|413917965|gb|AFW57897.1| arginine/serine-rich splicing factor 1 variant 3 isoform 3 [Zea
mays]
gi|413917966|gb|AFW57898.1| hypothetical protein ZEAMMB73_539697 [Zea mays]
Length = 121
Score = 125 bits (314), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 86/130 (66%), Gaps = 17/130 (13%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79
TR DI+RHF P+GN+ VRIR+NFAFV+FET EEA KALE+T + L+DRVISVEYA +
Sbjct: 3 TRVSDIERHFAPFGNISSVRIRKNFAFVRFETLEEARKALEATHATMLLDRVISVEYAFR 62
Query: 80 DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRS 139
DD ER DRYDSPRRGG SPAYR RPSPDYGR SP Y Y
Sbjct: 63 DDDERSDRYDSPRRGGGYGRR----GDSPAYRSRPSPDYGRPASPVYGSY---------- 108
Query: 140 PDHGRHRSPV 149
GR RSPV
Sbjct: 109 ---GRSRSPV 115
>gi|343171992|gb|AEL98700.1| arginine/serine-rich-splicing factor, partial [Silene latifolia]
Length = 340
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 108/185 (58%), Gaps = 40/185 (21%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINF P T+ RD++RHF+PYG +++VRIR NF FVQ+++QE+ATKAL++
Sbjct: 87 ANLRPSKTLFVINF-PSHTQTRDLERHFDPYGKIVNVRIRGNFGFVQYDSQEDATKALDA 145
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYG-----------------------R 98
T+ SK +DRVI+VEY+ + D D RR GY R
Sbjct: 146 TNMSKFLDRVITVEYSSRGD-------DDSRRNGYSPDRRVRDRSPDRRRRSPSPFRRER 198
Query: 99 HSP-YGRSPSP-AYRR-RPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRR 155
SP YG PSP +YRR R SP YG G S P QR SP + R RS P D R
Sbjct: 199 GSPDYGTGPSPISYRRERGSPVYGNGSS------RSPRRLQRASPGYNRKRSLTPRRDVR 252
Query: 156 RSPDY 160
SP+Y
Sbjct: 253 ASPEY 257
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
+F NFD R D++R F +G V V ++ FAF+ + + +A A+ + DR+
Sbjct: 3 IFCGNFD-FEARASDLERLFRRFGKVDRVDMKNGFAFIYMDDERDAGYAIRALDRTDF 59
>gi|343171990|gb|AEL98699.1| arginine/serine-rich-splicing factor, partial [Silene latifolia]
Length = 340
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/185 (46%), Positives = 108/185 (58%), Gaps = 40/185 (21%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
AN RP+KTLFVINF P T+ RD++RHF+PYG +++VRIR NF FVQ+++QE+ATKAL++
Sbjct: 87 ANLRPSKTLFVINF-PSHTQTRDLERHFDPYGKIVNVRIRGNFGFVQYDSQEDATKALDA 145
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYG-----------------------R 98
T+ SK +DRVI+VEY+ + D D RR GY R
Sbjct: 146 TNMSKFLDRVITVEYSSRGD-------DDSRRNGYSPDRRVRDRSPDRRRRSPSPFRRER 198
Query: 99 HSP-YGRSPSP-AYRR-RPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRR 155
SP YG PSP +YRR R SP YG G S P QR SP + R RS P D R
Sbjct: 199 GSPDYGTGPSPISYRRERGSPVYGNGSS------RSPRRLQRASPAYNRKRSLTPRRDVR 252
Query: 156 RSPDY 160
SP+Y
Sbjct: 253 ASPEY 257
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
+F NFD R D++R F +G V V ++ FAF+ + + +A A+ + DR+
Sbjct: 3 IFCGNFD-FEARASDLERLFRRFGKVDRVDMKNGFAFIYMDDERDAGYAIRALDRTDF 59
>gi|255646388|gb|ACU23673.1| unknown [Glycine max]
Length = 234
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 51/77 (66%), Positives = 69/77 (89%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+N RP+KTLFVINFDP+ R RD++RHF+ YG +L++RIRRNFAF+QFE+QE+AT+ALE+
Sbjct: 90 SNSRPSKTLFVINFDPVHARTRDLERHFDSYGKILNIRIRRNFAFIQFESQEDATRALEA 149
Query: 62 TDRSKLVDRVISVEYAL 78
T+ SK +DRVI+VEYA+
Sbjct: 150 TNLSKFMDRVITVEYAI 166
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 10/106 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K +F N D R+ D++R F YG V V ++ FAFV E + +A A+ DR++
Sbjct: 1 MKPVFCGNLD-FDARQSDVERLFRRYGKVDRVDMKSGFAFVYMEDERDAEYAIRRLDRTE 59
Query: 67 L--VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAY 110
R I VE+ ERD R R GG R S PS
Sbjct: 60 FGRKGRRIRVEWT---KQERDSR----RSGGDSRKSSSNSRPSKTL 98
>gi|6759507|emb|CAB69816.1| putative arginine/serine-rich splicing factor [Elaeis guineensis]
Length = 114
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 56/61 (91%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
M N RPTKTLFVINFDPIRTR RDI+RHFEPYG +L+V+IRRNFAFVQFETQEEATKALE
Sbjct: 52 MTNMRPTKTLFVINFDPIRTRVRDIERHFEPYGKILNVQIRRNFAFVQFETQEEATKALE 111
Query: 61 S 61
Sbjct: 112 C 112
>gi|440802526|gb|ELR23455.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 348
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 56/72 (77%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P++TLFV+NFD I TR RD++ F PYG ++ + ++RNF FVQF EEAT+ALE+ + +
Sbjct: 148 PSETLFVVNFDAISTRARDLEDLFSPYGRIVRIELKRNFGFVQFSAVEEATRALEALNGT 207
Query: 66 KLVDRVISVEYA 77
K+VDRVISVEY
Sbjct: 208 KMVDRVISVEYV 219
>gi|219123281|ref|XP_002181956.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406557|gb|EEC46496.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 361
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 56/78 (71%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
N P++TLFV+NF T++ D++ FEP+G ++ + ++RN+AFVQF+T EATKA E+T
Sbjct: 137 NIAPSETLFVVNFHEETTKKEDLQMLFEPFGELVRIDLKRNYAFVQFKTIAEATKAKETT 196
Query: 63 DRSKLVDRVISVEYALKD 80
+ KL V++VEY ++
Sbjct: 197 NGGKLDQSVLTVEYVARE 214
>gi|384252478|gb|EIE25954.1| hypothetical protein COCSUDRAFT_12541 [Coccomyxa subellipsoidea
C-169]
Length = 162
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 49/64 (76%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
+P TLFV+NFD RTRERD+++HFEP+G + V+I+RN+AFVQFE ++A AL+S +
Sbjct: 92 MKPATTLFVVNFDADRTRERDLEKHFEPFGRLKRVQIKRNYAFVQFENVDQAADALKSVN 151
Query: 64 RSKL 67
+ L
Sbjct: 152 GTHL 155
>gi|159475431|ref|XP_001695822.1| hypothetical protein CHLREDRAFT_80366 [Chlamydomonas reinhardtii]
gi|158275382|gb|EDP01159.1| predicted protein [Chlamydomonas reinhardtii]
Length = 170
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 58/79 (73%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
+ +P++TLFV+NFD RT ERDI+R+F +G + V+I+++++FVQF+ E+A KA+E
Sbjct: 87 DTKPSRTLFVVNFDVRRTTERDIERYFGRFGRLTRVQIKKSYSFVQFQNVEDAIKAMERA 146
Query: 63 DRSKLVDRVISVEYALKDD 81
+ +++ R ++VEY +D
Sbjct: 147 NGAQMEGRTLAVEYVQNED 165
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
++RP + LF+ NF+ ERDI R E YG V + +++ +AFV +E+ A+
Sbjct: 1 MSERPDRPLFIGNFE-YEAEERDIVRLMEKYGPVEKIDMKQGYAFVCMRYKEDGDVAIRK 59
Query: 62 TDRSKL--VDRVISVEYALKDDSER 84
DR++ R++ VE+A K +++R
Sbjct: 60 LDRTEWGYKKRMLKVEWAQKSEADR 84
>gi|294463259|gb|ADE77165.1| unknown [Picea sitchensis]
Length = 102
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 60/82 (73%), Gaps = 6/82 (7%)
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSP-RRGGYG-RHSP-YGRSPSPAYRR---RPSPDY 118
SKL+DRVISVEYA++DD +R+ + +SP RRGGYG R SP Y RS SP Y R RPSPDY
Sbjct: 2 SKLLDRVISVEYAIRDDDDRNGQRESPGRRGGYGKRVSPAYDRSVSPIYGRQGRRPSPDY 61
Query: 119 GRGRSPAYDRYNGPVYDQRRSP 140
GR SP Y+RY G V D+ SP
Sbjct: 62 GRAPSPIYERYRGSVNDRIHSP 83
>gi|302835886|ref|XP_002949504.1| hypothetical protein VOLCADRAFT_80657 [Volvox carteri f.
nagariensis]
gi|300265331|gb|EFJ49523.1| hypothetical protein VOLCADRAFT_80657 [Volvox carteri f.
nagariensis]
Length = 139
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 55/75 (73%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
+ RP+KTLFV+NFD RT ERDI+R+F +G + V+I++N++FVQF E A +ALE +
Sbjct: 41 DTRPSKTLFVVNFDVRRTSERDIERYFSRFGRLSRVQIKKNYSFVQFVDVESAVRALERS 100
Query: 63 DRSKLVDRVISVEYA 77
+ +++ R ++VE+
Sbjct: 101 NGAQMDGRTLAVEFV 115
>gi|397573588|gb|EJK48771.1| hypothetical protein THAOC_32400 [Thalassiosira oceanica]
Length = 366
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+P +TLFV+NF T+ D+ F PYG ++ + ++RN+AFVQFET ++A A E+T+
Sbjct: 157 QPNETLFVVNFHEETTKREDLDMLFSPYGKIVRIEMKRNYAFVQFETIDQAIAAKEATNG 216
Query: 65 SKLVDRVISVEYA 77
KL ++VEY
Sbjct: 217 GKLDQSELTVEYV 229
>gi|294461876|gb|ADE76495.1| unknown [Picea sitchensis]
Length = 149
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 68/130 (52%), Gaps = 33/130 (25%)
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGG--YGRHSP--------------------- 101
SK++DR I+VEYA ++D R SP RGG YGR +
Sbjct: 2 SKILDREITVEYAQREDGNRRGGRSSPIRGGGRYGRSAEDRGRDRSASPIYGRRAMRGSP 61
Query: 102 -YGRSPSPAYRRRP---SPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPV-PVYDRRR 156
YGR+PSP Y RRP SPDYGR SP Y R G RRSPD+ R SPV R+
Sbjct: 62 DYGRAPSPIYSRRPERRSPDYGRAPSPIYSRRQG-----RRSPDYARDASPVYASRPRKN 116
Query: 157 SPDYGRNRSP 166
SPDYGR+ SP
Sbjct: 117 SPDYGRDPSP 126
>gi|159477703|ref|XP_001696948.1| hypothetical protein CHLREDRAFT_120019 [Chlamydomonas reinhardtii]
gi|158274860|gb|EDP00640.1| predicted protein [Chlamydomonas reinhardtii]
Length = 169
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P+ LFVINFDP RT E+++ R+F P+G V V++ RNFAFV F +A A + T+ +
Sbjct: 98 PSHKLFVINFDPSRTGEQELWRYFSPFGRVTRVQMVRNFAFVVFADLRDAVAAQQRTNGA 157
Query: 66 KLVDRVISVEYA 77
L R ++VE++
Sbjct: 158 ILEGRTLNVEFS 169
>gi|255580168|ref|XP_002530915.1| RNA binding protein, putative [Ricinus communis]
gi|223529509|gb|EEF31464.1| RNA binding protein, putative [Ricinus communis]
Length = 354
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 65/182 (35%), Gaps = 19/182 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
P LFV RT +K+ F +G V+ R+ + F FV++ + E+A
Sbjct: 48 AEPNTNLFVSGLSK-RTTTEGLKQAFSKFGEVVQARVVTDRVSGYSKGFGFVRYGSLEDA 106
Query: 56 TKALESTDRSKLVDRVISVEYA-----LKDDSERDDRYDSPRRGGYGRH--SPYGRSPSP 108
K +E D L VI EYA L + Y + YG S YG S
Sbjct: 107 EKGIEGMDGKFLDGWVIFAEYARPRPPLPGN-NTGSAYGNNTGSAYGNSTGSAYGNSTGS 165
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNF 168
AY YG AY G Y +G S Y YG N +P F
Sbjct: 166 AYGNSTGSAYGNSTGSAYGNSTGSAYGNSTGSAYG--NSTGSAYGNSTGSAYGSNTTPAF 223
Query: 169 GR 170
G
Sbjct: 224 GN 225
>gi|224005402|ref|XP_002296352.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586384|gb|ACI65069.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 173
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P++TLFV+NF T+ D+++ F+ YG ++ V ++RN+AFVQF+T +EA A + T+
Sbjct: 90 PSETLFVVNFHEQTTKREDLEQLFQQYGELVRVDMKRNYAFVQFKTVDEAQAAKDGTNGG 149
Query: 66 KLVDRVISVEYA 77
KL I+VE+
Sbjct: 150 KLDQSEITVEFV 161
>gi|111226838|ref|XP_001134599.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970796|gb|EAS66915.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 737
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P++ +F++N++ +T DI PYGNV V++ +NF FV+FET ++A+KAL++ D
Sbjct: 223 PSRAIFIVNYNVSKTTTNDIADWCSPYGNVNRVQMVKNFCFVEFETIDQASKALKALDLK 282
Query: 66 KLVDRVISVEYA 77
++VEY
Sbjct: 283 SFDGHSLTVEYV 294
>gi|307105692|gb|EFN53940.1| hypothetical protein CHLNCDRAFT_25380 [Chlorella variabilis]
Length = 277
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P +TLFV FDP R RDI++ FE +G ++ I++ F+FV+FE E+A +A E S
Sbjct: 97 PNRTLFVAGFDPRGIRTRDIEKAFEEFGRLVRCEIKKTFSFVEFERIEDAKEACEQLHGS 156
Query: 66 KLVDRVISVE 75
++ R I+VE
Sbjct: 157 RINGREITVE 166
>gi|388518723|gb|AFK47423.1| unknown [Medicago truncatula]
Length = 340
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 77/172 (44%), Gaps = 24/172 (13%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R +R++++HF G V+ V + R F FV +T EEA
Sbjct: 41 ENPGNNLYVTGLSP-RITKRELEKHFSAKGKVVDVHLVVDPWTRESRGFGFVTMDTLEEA 99
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS 115
+ ++ +RS L RVI+VE A + G + GR SP+Y R
Sbjct: 100 DRCVKYLNRSVLEGRVITVEKARRRRGRTPTPGKY-----LGLKTIRGRRRSPSYSPR-- 152
Query: 116 PDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR--SPDYGRNRS 165
RSP+Y Y S DH R RS P Y RRR SPDY R R+
Sbjct: 153 ------RSPSYSPYRRSYNRSPYSSDHSRSRSYSPDYRRRRSYSPDYRRRRA 198
>gi|281209187|gb|EFA83362.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 503
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 46/73 (63%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+P T+F+++++ T E I R +P+G+++ + +R+ F FV+F E+ATKALE+ +
Sbjct: 145 KPCPTIFLVHYNVDTTTEESISRLCKPFGDIVRIEMRKTFCFVEFTDAEQATKALEALHK 204
Query: 65 SKLVDRVISVEYA 77
++ + VE+
Sbjct: 205 KEIDGSKLVVEFV 217
>gi|449018009|dbj|BAM81411.1| similar to splicing factor RSp31 [Cyanidioschyzon merolae strain
10D]
Length = 301
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 46/73 (63%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
+KTLFV+NFDP RD+ HF +G + + R++FAF++F + ++A +A D +
Sbjct: 139 SKTLFVVNFDPDEITSRDLLIHFHRFGPIERIERRKHFAFIEFRSLDDAIRARSEMDGAY 198
Query: 67 LVDRVISVEYALK 79
+ R +SVE++ K
Sbjct: 199 IGCRQVSVEFSQK 211
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 9/77 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQF------ETQEEATKALE 60
K L++ N R +RDI++ EPYG V + ++ N+ FV F E E A AL
Sbjct: 27 VKALYIANIG--RAPQRDIEKLVEPYGKVQRIEMKSNYCFVYFSEDTAVEAYEHAIAALN 84
Query: 61 STDRSKLVDRVISVEYA 77
R R+++ E+A
Sbjct: 85 G-QRLGSQSRILTAEWA 100
>gi|221128969|ref|XP_002161622.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Hydra
magnipapillata]
Length = 277
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 78/168 (46%), Gaps = 34/168 (20%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
+ LFV N +P R RD++ F YG ++ +++NF F+QFE + +A A++ + +
Sbjct: 2 SSELFVGNLNP-EVRVRDLENCFGRYGKIVRCDLKKNFGFIQFEDRRDAEIAIQKENNRR 60
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPD--YGRGRSP 124
L+ ++VE+A RG G G P P +R+ SPD GRG P
Sbjct: 61 LLGSDMTVEWA---------------RGTVGDKM-RGNGP-PPFRKPHSPDRFQGRGGPP 103
Query: 125 AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDY------GRNRSP 166
R P P GR RSP+ + R RSP GR RSP
Sbjct: 104 FISRPRSP-------PVRGRDRSPI-LRGRDRSPGIRQAMGRGRERSP 143
>gi|343172766|gb|AEL99086.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 507
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
K++F+ P +R +++HF+ YG + V + RN F FV F T E A
Sbjct: 329 VKSVFIDGLPPYWDEDR-VRKHFQGYGEIKRVTLARNMPAAKRKDFGFVDFMTHEAAIAC 387
Query: 59 LESTDRSKLVD--RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRS---PSPAYRRR 113
+E ++ LVD I V L + + RGG+ P GRS P P R
Sbjct: 388 IEDVNKKDLVDGNSKIKVRARLSNPLPKMQAVKGGMRGGFRIGRPNGRSLGRPGPLI-NR 446
Query: 114 PSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVP 150
P+ YGR +++ GP RR P G H +P P
Sbjct: 447 PNFQYGRASRGSFNDPAGPYV--RRHPHRGGHSAPGP 481
>gi|346327061|gb|EGX96657.1| arginine/serine-rich splicing factor, putative [Cordyceps militaris
CM01]
Length = 813
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + ++D+ F YG + + ++ + FVQ+ T EE ++A++S + ++
Sbjct: 355 LFIGNLSSDKVSKKDVFEIFHKYGRLAQISLKSAYGFVQYHTVEEGSRAVQSLEGIEIKG 414
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + D + +R SP RG GR G Y R GR SP +
Sbjct: 415 RRIHLEVSKLQDKSKKERNKSPERGSRGRD---GARKGDKYYDRDERRGGRHHSPRRQGH 471
Query: 130 NG--PVYDQR-RSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYRR 173
+G Y R + D GR R DR RSP YGR+ + RYR+
Sbjct: 472 HGRDSSYSGRDKFHDSGRGR------DRSRSPGYGRS---DKSRYRK 509
>gi|452824262|gb|EME31266.1| arginine/serine-rich splicing factor, putative [Galdieria
sulphuraria]
Length = 483
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
PT++LFV NF P RERD++R F+ +G V++V I R++AFV F + ++A+ A E
Sbjct: 150 PTESLFVTNF-PSYFRERDLERIFDQFGKVVNVEIIRSYAFVTFASIKDASFAYEKMHHF 208
Query: 66 KLVD-RVISVEYALKD 80
L D R + VEY +
Sbjct: 209 TLDDGRELHVEYVTAN 224
>gi|46249455|gb|AAH68622.1| LOC414671 protein, partial [Xenopus laevis]
Length = 323
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTD 63
+I + E D+K+HF +G+VL V I R FAFVQ + EA+KAL+ T+
Sbjct: 116 LIIRNLSFQCSEDDLKKHFSNFGSVLEVNIPKKPDGKMRGFAFVQLKNMLEASKALKGTN 175
Query: 64 RSKLVDRVISVEYALKDD 81
+ R ++V++A+ D
Sbjct: 176 MKSIKGRTVAVDWAVAKD 193
>gi|54312090|ref|NP_001005882.1| RNA-binding protein 47 [Rattus norvegicus]
gi|81910667|sp|Q66H68.1|RBM47_RAT RecName: Full=RNA-binding protein 47; AltName: Full=RNA-binding
motif protein 47
gi|51859195|gb|AAH81995.1| Hypothetical RNA binding protein RGD1359713 [Rattus norvegicus]
gi|149035343|gb|EDL90047.1| hypothetical RNA binding protein RGD1359713, isoform CRA_a [Rattus
norvegicus]
gi|149035344|gb|EDL90048.1| hypothetical RNA binding protein RGD1359713, isoform CRA_a [Rattus
norvegicus]
Length = 590
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALES 61
+ K L+V N I T E IKR F + G V V+ R++AFV F ++E+A A+ +
Sbjct: 242 MQTVKILYVRNLM-IETTEETIKRSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNN 300
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
+ ++L + V A D E+ RY +GG G + PS Y P
Sbjct: 301 LNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGGSAEAVAQQPSYVYSCDP 353
>gi|123504802|ref|XP_001328836.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121911784|gb|EAY16613.1| hypothetical protein TVAG_434500 [Trichomonas vaginalis G3]
Length = 280
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKAL 59
KTLF+ N PI E+ ++ FEPYG +L I R AFV+FE E+A A+
Sbjct: 12 KTLFIANL-PIEALEKHVREVFEPYGTILTAFIVNTRGTVRSRGIAFVEFEKHEQAEAAM 70
Query: 60 ESTDRSKLVDRVISVEYA 77
+T+ K + I V++A
Sbjct: 71 AATNGMKFWENQIRVQWA 88
>gi|328874817|gb|EGG23182.1| hypothetical protein DFA_05314 [Dictyostelium fasciculatum]
Length = 527
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 51/82 (62%), Gaps = 13/82 (15%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE--- 60
+P+ +LF++NF +T + I+ +P+G + + +R+NF FV+F+ E++TKA+E
Sbjct: 313 MKPSTSLFLVNFGS-KTNQSLIETWCKPFGRINRIDMRKNFCFVEFDNIEQSTKAMEALH 371
Query: 61 ----STDRSKLVDRVISVEYAL 78
++D +KL +VE+A+
Sbjct: 372 GKDVASDGNKL-----TVEFAI 388
>gi|198414940|ref|XP_002124726.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
Length = 1397
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 13/76 (17%)
Query: 96 YGRHSP---YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVY 152
Y R+S YG P P Y +P PDYG G P Y+ NGP PD+G P+P Y
Sbjct: 947 YKRNSASPIYGNGPPPNYGNKPLPDYGNGPPPKYE--NGP------PPDYG--NKPLPDY 996
Query: 153 DRRRSPDYGRNRSPNF 168
PDYG P++
Sbjct: 997 GNGPPPDYGNGPPPDY 1012
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 12/74 (16%)
Query: 96 YGRHSP--YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYD 153
YG P Y P P Y +P PDYG G P Y NGP PD+ P P Y+
Sbjct: 972 YGNGPPPKYENGPPPDYGNKPLPDYGNGPPPDYG--NGP------PPDY--ENGPPPKYE 1021
Query: 154 RRRSPDYGRNRSPN 167
PDYG P+
Sbjct: 1022 NGPPPDYGNKPPPD 1035
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 111 RRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
R SP YG G P Y N P+ D P P P Y + PDYG P++G
Sbjct: 949 RNSASPIYGNGPPPNYG--NKPLPDYGNGPPPKYENGPPPDYGNKPLPDYGNGPPPDYG 1005
>gi|26330794|dbj|BAC29127.1| unnamed protein product [Mus musculus]
Length = 590
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALES 61
+ K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ +
Sbjct: 242 MQTVKILYVRNLM-IETTEETIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNN 300
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
+ ++L + V A D E+ RY +GG G + PS Y P
Sbjct: 301 LNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGGSAEAVAQQPSYVYSCDP 353
>gi|74216343|dbj|BAE25115.1| unnamed protein product [Mus musculus]
Length = 377
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALES 61
+ K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ +
Sbjct: 242 MQTVKILYVRNL-MIETTEETIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNN 300
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
+ ++L + V A D E+ RY +GG G + PS Y P
Sbjct: 301 LNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGGSAEAVAQQPSYVYSCDP 353
>gi|20532346|ref|NP_620704.1| RNA-binding protein 47 [Mus musculus]
gi|188497698|ref|NP_848541.2| RNA-binding protein 47 [Mus musculus]
gi|188497701|ref|NP_001120854.1| RNA-binding protein 47 [Mus musculus]
gi|81916136|sp|Q91WT8.1|RBM47_MOUSE RecName: Full=RNA-binding protein 47; AltName: Full=RNA-binding
motif protein 47
gi|15488668|gb|AAH13481.1| RNA binding motif protein 47 [Mus musculus]
gi|21707976|gb|AAH34195.1| Rbm47 protein [Mus musculus]
gi|26351775|dbj|BAC39524.1| unnamed protein product [Mus musculus]
gi|74206583|dbj|BAE41553.1| unnamed protein product [Mus musculus]
gi|133778325|gb|AAI12903.1| RNA binding motif protein 47 [Mus musculus]
gi|148705813|gb|EDL37760.1| cDNA sequence BC013481, isoform CRA_a [Mus musculus]
gi|148705814|gb|EDL37761.1| cDNA sequence BC013481, isoform CRA_a [Mus musculus]
Length = 590
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALES 61
+ K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ +
Sbjct: 242 MQTVKILYVRNLM-IETTEETIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNN 300
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
+ ++L + V A D E+ RY +GG G + PS Y P
Sbjct: 301 LNGTELEGSCLEVTLAKPVDKEQYSRYQKAAKGGGGSAEAVAQQPSYVYSCDP 353
>gi|195440905|ref|XP_002068276.1| GK13148 [Drosophila willistoni]
gi|194164361|gb|EDW79262.1| GK13148 [Drosophila willistoni]
Length = 371
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N PI TR +D++ +PYGNVL +++NF FVQFE++E A KA + +RS
Sbjct: 25 IFLGNI-PICTR-KDLESICQPYGNVLGSVVQKNFGFVQFESEEIANKAATALNRSTFKS 82
Query: 70 RVISV 74
V++V
Sbjct: 83 NVLTV 87
>gi|343172764|gb|AEL99085.1| RNA recognition motif-containing protein, partial [Silene
latifolia]
Length = 507
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 17/157 (10%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
K++F+ P +R +++HF+ YG + V + RN F FV F T E A
Sbjct: 329 VKSVFIDGLPPYWDEDR-VRKHFQGYGEIERVTLARNMPAAKRKDFGFVDFLTHEAAIAC 387
Query: 59 LESTDRSKLVD--RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRS---PSPAYRRR 113
++ ++ LVD I V L + + RGG+ P GRS P P R
Sbjct: 388 IDDINKKDLVDGNSKIKVRARLSNPLPKMQAVKGGMRGGFRIGRPNGRSLGRPGPLI-NR 446
Query: 114 PSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVP 150
P+ YGR +++ GP RR P G H +P P
Sbjct: 447 PNFQYGRASRGSFNDPAGPYV--RRHPHRGGHSAPGP 481
>gi|313227405|emb|CBY22552.1| unnamed protein product [Oikopleura dioica]
Length = 318
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R R RDI F+ YG ++ + I+ +AFV+FE + +A A++ D KL + +E
Sbjct: 14 PERVRSRDIDDFFKGYGRIVDISIKTKYAFVEFEDERDAADAVKDLDDQKLNGSRVRLEV 73
Query: 77 ALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRR-RPSPDYGRGRS------------ 123
+ D+Y +R G R+ Y +S SP RR R G+GRS
Sbjct: 74 S----KGCKDKYRDFQRTGRVRYRSYSKSVSPGRRRHRSRSPVGKGRSRSRSPARGSDRR 129
Query: 124 ------PAYDRYNGP 132
PAY +Y P
Sbjct: 130 ETFYSKPAYKKYGAP 144
>gi|390348058|ref|XP_796831.2| PREDICTED: uncharacterized protein LOC592201 [Strongylocentrotus
purpuratus]
Length = 324
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 76/153 (49%), Gaps = 34/153 (22%)
Query: 4 QRPTKTLFVINFD-PIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
+ PT++ + F + T ERD++ +E YG + +V + R FAFV F +
Sbjct: 145 ENPTESSCLGVFGLSLYTTERDLRDVYEHYGTLTNVNVVYDHQTGRSRGFAFVMFANTGD 204
Query: 55 ATKALESTDRSKLVDRVISVEYAL-------------------KDDSERDDRYDSPRRGG 95
AT A EST+ +++ R I V++++ K D R +R PR G
Sbjct: 205 ATAARESTNGTEVDGRRIRVDFSITERAHTPTPGVYMGKPTSNKRDFNRGERGYHPR--G 262
Query: 96 YGRH-SP--YGRSPSPAYRRRPSPDYGRGRSPA 125
Y R SP Y RSPSP YRR PSP Y R RSP+
Sbjct: 263 YHRSPSPHYYRRSPSPYYRRTPSPHYYR-RSPS 294
>gi|223944069|gb|ACN26118.1| unknown [Zea mays]
gi|413956219|gb|AFW88868.1| hypothetical protein ZEAMMB73_204329 [Zea mays]
Length = 315
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 83/182 (45%), Gaps = 40/182 (21%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +RD+++HF G V+ + R F FV ++A
Sbjct: 36 ENPGNNLYVTGLS-ARVTDRDLEKHFSTEGEVIDASVVYDPWTRESRGFGFVTMAAVKDA 94
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRP 114
+ ++ DRS L RVI+VE A + R +P G Y G S GR S +Y
Sbjct: 95 DRCIKYLDRSVLQGRVITVEKAKR------RRGRTPTPGKYLGTKSSRGRRYSTSY---- 144
Query: 115 SPDYGRGRSPAYDRYNGPVYDQRRSPD----HGRHRSPVPVYDRRRS-PDYGRNR--SPN 167
SPD RGR Y R SPD HGR RS P YDRRRS YGR+ SP
Sbjct: 145 SPD-RRGR-----------YSSRYSPDRRDCHGRDRSYSP-YDRRRSYSPYGRDESYSPY 191
Query: 168 FG 169
+G
Sbjct: 192 YG 193
>gi|297832588|ref|XP_002884176.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330016|gb|EFH60435.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
KTLFV N PI T+ I F+ G V+HVR+ F FV+F + EA KALE
Sbjct: 240 KTLFVTNLSPITTKISHIINFFKDVGQVVHVRLIVDQRCRMVGFGFVEFASANEAEKALE 299
Query: 61 STDRSKLVDRVISVEYALKD-DSERD 85
L +R I++ +A D D+ +D
Sbjct: 300 KKKGEYLHNREIALAFAKTDADTSKD 325
>gi|444319050|ref|XP_004180182.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
gi|387513224|emb|CCH60663.1| hypothetical protein TBLA_0D01550 [Tetrapisispora blattae CBS 6284]
Length = 420
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T LFV F P +E ++ F P+G + V+I FAFV+FE E A+KA+E +
Sbjct: 106 TTRLFVRPF-PFDVQESELNEIFAPFGAMKEVKILNGFAFVEFEEPESASKAIEEVNGKT 164
Query: 67 LVDRVISVEYA 77
D+ + V ++
Sbjct: 165 FADQPLEVLFS 175
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQ 52
MA R TK +FV P T E D +++FE +GN+ V + R F F+ ++++
Sbjct: 95 MAGPR-TKKIFVGGLAPTVT-EDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSE 152
Query: 53 EEATKALESTDRSKLVDRVISVEYAL-KDDSERDDRYDSPRRGGYG---RHSPYGRSPSP 108
+ K L+ T +L ++ + V+ A+ KD S + R + R YG YG +P
Sbjct: 153 DAVDKVLQQTFH-QLKEKTVEVKRAIPKDMSPGNTRGSAGRGASYGAPYMQGGYGPTPVG 211
Query: 109 AYRRRPSPDYGRGRSP 124
AY RP P G G P
Sbjct: 212 AYGARP-PIAGTGYPP 226
>gi|335308866|ref|XP_003361402.1| PREDICTED: RNA-binding protein 28-like, partial [Sus scrofa]
Length = 365
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTD 63
+I + E D+K F P+G VL V I R FAFVQF+ EA KAL S +
Sbjct: 169 LIIRNLSFKCSEDDLKTVFAPFGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALRSMN 228
Query: 64 RSKLVDRVISVEYALKDD 81
++ R ++V++A+ D
Sbjct: 229 MKEIKGRTVAVDWAVAKD 246
>gi|74198338|dbj|BAB31653.3| unnamed protein product [Mus musculus]
Length = 243
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTD 63
+I + E D+K F YG VL V I R FAFVQF+ EA KAL+ +
Sbjct: 116 LIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGAN 175
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSP 91
++ R ++V++A+ D +D ++ S
Sbjct: 176 MKEIKGRTVAVDWAVAKDKYKDAQHASA 203
>gi|403217594|emb|CCK72088.1| hypothetical protein KNAG_0I03040 [Kazachstania naganishii CBS
8797]
Length = 697
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 20 TRERDIKRHFEPYGNVLHV----RIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75
T E +KRHF YGN++ + +I FAF++F+T++ A+ ALE + S +++ I V+
Sbjct: 319 TDEDSLKRHFSVYGNIVSLTLIHKITNVFAFIEFDTEKAASAALEKENHSIFLNKTIHVQ 378
Query: 76 Y 76
Y
Sbjct: 379 Y 379
>gi|255558828|ref|XP_002520437.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis]
gi|223540279|gb|EEF41850.1| FUS-interacting serine-arginine-rich protein 1, putative [Ricinus
communis]
Length = 399
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 38/146 (26%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R +RD+++HF G V+ V + R F FV T EA
Sbjct: 43 ENPGNNLYVTGLSP-RITKRDLEKHFASEGKVIDVHLVVDPWTRESRGFGFVTMSTLVEA 101
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPA------ 109
+ ++ +RS L RVI+VE A + RR GR+P+P
Sbjct: 102 DRCIKYLNRSVLEGRVITVEKAKR------------RR---------GRTPTPGRYLGLR 140
Query: 110 --YRRRPSPDYGRGRSPAYDRYNGPV 133
RR +P + RSP+Y RY G +
Sbjct: 141 TIRVRRLTPSHSPHRSPSYSRYRGSL 166
>gi|213404764|ref|XP_002173154.1| multicopy suppressor of sporulation protein msa1
[Schizosaccharomyces japonicus yFS275]
gi|212001201|gb|EEB06861.1| multicopy suppressor of sporulation protein msa1
[Schizosaccharomyces japonicus yFS275]
Length = 507
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 5 RPTKTLFVINFDPIRTRER---DIKRHFEPYGNVLHVRI-----RRNFAFVQFETQEEAT 56
RP LFV + + R+ + ++ HF+ +G +LHV++ +R ++FVQF+ QE+A+
Sbjct: 73 RPIACLFVASLNSARSEQELATAVENHFKRWGPLLHVKVLKDWLQRPYSFVQFQNQEDAS 132
Query: 57 KALESTDRSKLVDRVISVEYA 77
+AL + L R I VE A
Sbjct: 133 RALAEAHNTLLDGRYIRVEQA 153
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-----RRNFAFVQFETQEEATKALESTD 63
++F DP + HF +GNV+ ++ + FAFV+F+TQ A A+ S +
Sbjct: 353 SIFAGQLDPTHCSRELLIDHFSKFGNVVDCKLIHQGRKSAFAFVRFDTQAAAMSAVSSEN 412
Query: 64 RSKLVDRVISVEY 76
+ + I V++
Sbjct: 413 KPVFQQKPIRVQF 425
>gi|356524435|ref|XP_003530834.1| PREDICTED: uncharacterized protein LOC100805126 [Glycine max]
Length = 362
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R +R++++HF G V+ V + R F FV ET EEA
Sbjct: 44 ENPGNNLYVTGLSP-RITKRELEKHFSAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEA 102
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ ++ +RS L RVI+VE A
Sbjct: 103 DRCVKYLNRSVLEGRVITVEKA 124
>gi|403364183|gb|EJY81848.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 677
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHV-------RIRRNFAFVQFETQEEATKALE 60
K L++ N + DI++ FEP+GN++ R + +AFV +E +E A A+E
Sbjct: 7 KKLYIKNL-AFEVVQADIRQAFEPFGNIVTCDVPMENPRKCKGYAFVSYEDEETAKNAME 65
Query: 61 STDRSKLVDRVISVEYALK 79
+ ++++R I + YA K
Sbjct: 66 KMNNQQILNRNIFINYATK 84
>gi|168067786|ref|XP_001785787.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662557|gb|EDQ49394.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1157
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKAL 59
+ +R +TL+V P ++ + HFE +G V+ VRI + AFVQF T+EEA AL
Sbjct: 686 STERAQRTLYVNCIPPNSNQQEVLLTHFEKFGRVVDVRIPSHSHRAFVQFATREEAESAL 745
Query: 60 ESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRG 94
S D + L +R I + +A +D D+ + G
Sbjct: 746 ASPD-AVLGNRFIRLSWANRDSITSDNGASTSSTG 779
>gi|12850171|dbj|BAB28620.1| unnamed protein product [Mus musculus]
Length = 233
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTD 63
+I + E D+K F YG VL V I R FAFVQF+ EA KAL+ +
Sbjct: 116 LIIRNLSFKCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGAN 175
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSP 91
++ R ++V++A+ D +D ++ S
Sbjct: 176 MKEIKGRTVAVDWAVAKDKYKDAQHASA 203
>gi|330801718|ref|XP_003288871.1| hypothetical protein DICPUDRAFT_98159 [Dictyostelium purpureum]
gi|325081064|gb|EGC34594.1| hypothetical protein DICPUDRAFT_98159 [Dictyostelium purpureum]
Length = 467
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
RP +F++N++ ++T I + +P+G + +++ +N+ FV+F + EATKAL +
Sbjct: 151 RPCPAIFIVNYNVLKTTINLIIKLCQPHGVINRIQMVKNYCFVEFSSTIEATKALNYLN- 209
Query: 65 SKLVD-RVISVEYAL 78
K+VD ++VEY
Sbjct: 210 YKIVDGHTLTVEYVC 224
>gi|344302325|gb|EGW32630.1| hypothetical protein SPAPADRAFT_61691 [Spathaspora passalidarum
NRRL Y-27907]
Length = 291
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 10 LFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
LFV I FD R + ++ HF P G+V+ V++ R FAFV+F+ +E+AT+A+E+ + S+
Sbjct: 18 LFVRPIGFDVPREQ---LEEHFAPAGHVVDVQLMRGFAFVRFDNEEDATRAVETLNDSEF 74
Query: 68 VDRVISVEYA 77
+ + VEYA
Sbjct: 75 DGQRLLVEYA 84
>gi|281210217|gb|EFA84385.1| CCHC-type Zn finger-containing protein [Polysphondylium pallidum
PN500]
Length = 274
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
+ FD RER+I+ HF YG + H+++++ F F+++ +++ A +A+ S+ R+ + R I
Sbjct: 9 LAFD---AREREIEDHFGRYGRISHIQMKKGFCFIEYSSRDAADEAINSSHRTNFLGRSI 65
Query: 73 SVEYALKDDSER 84
VE + + ++R
Sbjct: 66 VVEKSHSNGAKR 77
>gi|358058378|dbj|GAA95897.1| hypothetical protein E5Q_02555 [Mixia osmundae IAM 14324]
Length = 680
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 10/92 (10%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATK 57
RPT TL + N P +++++ F+ YGN+ +R+ R FAFV+F + EA +
Sbjct: 568 RPTSTLVIKNV-PFEVSKKELQALFKSYGNIKSLRMPRKADRHTRGFAFVEFRSTAEAKE 626
Query: 58 ALESTDRSKLVDRVISVEYALKDD--SERDDR 87
A ++ ++ L+ R + +EY D S RDD+
Sbjct: 627 AKQALSQTHLLGRHLVIEYGQADQGASLRDDK 658
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKAL 59
T LF+ N R D++ F +G V HV + RR A+V FET +EA +A
Sbjct: 185 TNRLFLRNL-AFTVRSSDLQTTFAQHGRVSHVHLVDEDKTERRGLAYVTFETAKEAEQAR 243
Query: 60 ESTDRSKLVDRVISVEYALKDDSERD 85
+ D + L R++ V A E D
Sbjct: 244 SALDGTILHGRLLHVMLAAARPGEAD 269
>gi|156847787|ref|XP_001646777.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
gi|156117457|gb|EDO18919.1| hypothetical protein Kpol_1023p90 [Vanderwaltozyma polyspora DSM
70294]
Length = 415
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T LFV F P+ +E ++ F P+G++ V+I FAFV+FE E A KA+E +
Sbjct: 116 TTRLFVRPF-PLDVQESELNEIFAPFGSMKEVKILNGFAFVEFEDSESAAKAIEEVNGKT 174
Query: 67 LVDRVISVEYA 77
D+ + V Y+
Sbjct: 175 FADQPLEVVYS 185
>gi|224106315|ref|XP_002314126.1| predicted protein [Populus trichocarpa]
gi|222850534|gb|EEE88081.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R ++++++HF G V+ V + R F FV T EEA
Sbjct: 48 ENPGNNLYVTGLSP-RITKKELEKHFSAEGTVIDVHLVVDPWTRESRGFGFVTMSTVEEA 106
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 107 DHCIKYLDRSVLEGRVITVEKA 128
>gi|453080807|gb|EMF08857.1| hypothetical protein SEPMUDRAFT_151767 [Mycosphaerella populorum
SO2202]
Length = 815
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 72/173 (41%), Gaps = 52/173 (30%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N + +RDI F PYG + + I++ + FVQF E+ T+AL + ++ D
Sbjct: 397 LFVGNLSSEKVTKRDIFHVFHPYGEIAQISIKQAYGFVQFLRVEDCTRALNAEQGRQIRD 456
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR------------------ 111
+ I +E + R D+ + RR RS SPAY
Sbjct: 457 KRIHLEVSKPQKPPR-DKLQNHRR----------RSRSPAYDDRGRNDRRGRGRDGRDGG 505
Query: 112 ------RRPSP-DYGRG---------RSPAYDRYNGPVYDQRRSPDHGRHRSP 148
R PSP DY RG RSPAY R R+ D+G HR P
Sbjct: 506 RNSYGARSPSPRDYNRGQDDRYRTRSRSPAYGR-------DLRNWDNGPHRGP 551
>gi|126342214|ref|XP_001362315.1| PREDICTED: RNA-binding protein 47-like isoform 1 [Monodelphis
domestica]
Length = 583
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K L+V N I+T E I++ F +G V V+ R++AFV F ++E+A +A+ S + ++
Sbjct: 244 VKILYVRNLM-IKTSEETIRKTFSQFGCVERVKKIRDYAFVHFTSREDAIRAMNSLNGTE 302
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRG 94
L + V A D E+ RY +G
Sbjct: 303 LEGSCLGVTLAKPVDKEQYARYRKAVKG 330
>gi|354548311|emb|CCE45047.1| hypothetical protein CPAR2_700510 [Candida parapsilosis]
Length = 272
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 3 NQRPTKTLFVINFDPIR--TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
Q PTK LFV PIR RE D+ F V+ VR+ + +AFV F+T++EA AL+
Sbjct: 2 EQVPTKQLFV---RPIRDDVREDDLIEFFSTAAPVVEVRLMQGYAFVSFQTEDEADAALK 58
Query: 61 STDRSKLVDRVISVEYA 77
D +L + VE+A
Sbjct: 59 KMDGQELNGEQLQVEFA 75
>gi|363751515|ref|XP_003645974.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889609|gb|AET39157.1| hypothetical protein Ecym_4077 [Eremothecium cymbalariae
DBVPG#7215]
Length = 319
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
A++ T LFV F P+ +E ++ F P+G + V+I FAFV+FE E A +A+
Sbjct: 30 ADELSTTRLFVRPF-PLDVQESELNEIFSPFGALKDVKILNGFAFVEFEQAEAAEQAINE 88
Query: 62 TDRSKLVDRVISVEYALK 79
+ D+ + V Y+ K
Sbjct: 89 VNGKSFADQPLDVVYSRK 106
>gi|432888609|ref|XP_004075076.1| PREDICTED: RNA-binding protein 4B-like [Oryzias latipes]
Length = 346
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P E +IK FE YG V I +NFAFV E ++ ATKA+++ + L
Sbjct: 4 IFVGNL-PQEATEEEIKALFEEYGTVTECDIVKNFAFVHMEDRKAATKAIKNLHQHSLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TAINVE 68
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 14 NFDPIRTR--------ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
NF P++ + +++ FE YG V + +NFAFV +EA A++ D S
Sbjct: 74 NFGPVKIHVANVEKGCDEELRALFEEYGTVSECAVVKNFAFVHMPNYDEAMDAIKELDNS 133
Query: 66 KLVDRVISVE 75
++ I V+
Sbjct: 134 DFQEKRIHVQ 143
>gi|407410696|gb|EKF33036.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 477
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNF--------AFVQFETQEEATKALES 61
LF+ N P + +R+++ F PYG +L + RN AFV++ T EEA +A+E
Sbjct: 117 LFISNI-PHKMEQRELENLFAPYGQILSAAVMRNIHTGNSLGTAFVRYATTEEAMRAIEG 175
Query: 62 TDRSKLVDRVISVEYALK 79
++ R I+V++A K
Sbjct: 176 MSGKRIGGRAIAVQWAKK 193
>gi|168042343|ref|XP_001773648.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675036|gb|EDQ61536.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1041
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALES 61
+R +TL+V P R + HFE +G V+ VRI + AFVQF T+EEA AL S
Sbjct: 607 ERAQRTLYVNCIPPNSNRREVLLTHFEKFGRVVDVRIPPHSHRAFVQFATREEAESALAS 666
Query: 62 TDRSKLVDRVISVEYALKDDSERDD 86
D + L +R I + +A +D D+
Sbjct: 667 PD-AVLGNRFIRLSWANRDSITSDN 690
>gi|167392627|ref|XP_001740231.1| poly(A) binding protein [Entamoeba dispar SAW760]
gi|165895743|gb|EDR23363.1| poly(A) binding protein, putative [Entamoeba dispar SAW760]
Length = 289
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
KTL+V + D + E +K F PYGNV++ I+++ +AF++++ E+A KA
Sbjct: 1 MKTLYVSDVD-VSIDENKLKELFSPYGNVINSTIKKSSKGTNDFYYAFIEYDRPEDAAKA 59
Query: 59 LESTDRSKLVDRVISVEYA 77
L D+ +L + ++V++A
Sbjct: 60 LHEMDQHELAGKRLNVKFA 78
>gi|392592864|gb|EIW82190.1| RNA-binding domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 306
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
PT+ L V IRT+ERD+ F +G V V I R F F++ EEAT+
Sbjct: 82 PTQVLGVFGLS-IRTQERDLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSAVEEATR 140
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPA 109
++ + +L R I V+Y++ DR +P G Y H GR PA
Sbjct: 141 CIQELNGVELNGRRIRVDYSVT------DRPHAPTPGEYMGHRRSGRDTFPA 186
>gi|67482201|ref|XP_656450.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56473655|gb|EAL51070.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449703568|gb|EMD43997.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
KTL+V + D + E +K F PYGNV++ I+++ +AF++++ E+A KA
Sbjct: 1 MKTLYVSDVD-VSIDENKLKELFSPYGNVINSTIKKSSKGTNDFYYAFIEYDRPEDAAKA 59
Query: 59 LESTDRSKLVDRVISVEYA 77
L D+ +L + ++V++A
Sbjct: 60 LREMDQHELAGKRLNVKFA 78
>gi|357120144|ref|XP_003561789.1| PREDICTED: uncharacterized protein LOC100835076 [Brachypodium
distachyon]
Length = 356
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV R +RD+++HF G V+ I R F FV T +EA +
Sbjct: 48 PGNNLFVTGLSS-RLTDRDLEKHFSTEGEVIDASIVLDPWTRESRGFGFVTMATLKEADR 106
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 107 CIKYLDRSVLEGRVITVEKA 126
>gi|410906771|ref|XP_003966865.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 416
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 10/157 (6%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
R + L V N I ++++ FE +G VL I +N+AFV E E+A A+ D
Sbjct: 74 SRGSTKLHVGN---IACTNQELRAKFEEFGAVLECDIVKNYAFVHMERMEDAMDAINQLD 130
Query: 64 RSKLVDRVISVEYALK------DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPD 117
+ +++SV+ + R Y + G + + P ++ P P+PD
Sbjct: 131 NTAFKGKLMSVKLSTSRLRTAPGMGNRSGCYRCGQEGHWSKECPLDQNGHPRNGSEPNPD 190
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDR 154
G R G +D PDHG + V + R
Sbjct: 191 -GYDTPKYAGRGKGYHHDFSGDPDHGGGYAAVHGFSR 226
>gi|330843751|ref|XP_003293810.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
gi|325075834|gb|EGC29677.1| hypothetical protein DICPUDRAFT_84328 [Dictyostelium purpureum]
Length = 292
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALE 60
TL V N +P +TRE D++ F +G + I R F FV F + +EAT A+
Sbjct: 69 TLHVSNLNP-KTREEDLRDTFAQFGKIAECTILVDPNTKESRGFGFVTFLSSDEATDAIS 127
Query: 61 STDRSKLVDRVISVE 75
D SKL VI VE
Sbjct: 128 RLDSSKLDGNVIRVE 142
>gi|366986941|ref|XP_003673237.1| hypothetical protein NCAS_0A02880 [Naumovozyma castellii CBS 4309]
gi|342299100|emb|CCC66846.1| hypothetical protein NCAS_0A02880 [Naumovozyma castellii CBS 4309]
Length = 588
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTD 63
K++FV P T E +K HF +G +L + + + FAF+Q+ET+ A ALE+ +
Sbjct: 357 KSIFVGQL-PEETTEEVLKIHFSKHGKILDLNLIHKPKNVFAFIQYETENAAAIALETEN 415
Query: 64 RSKLVDRVISVEY 76
S + + I V+Y
Sbjct: 416 HSIFISKTIHVQY 428
>gi|168016185|ref|XP_001760630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688327|gb|EDQ74705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1084
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRS 65
+TL+V P + D+ HFE +G V+ VRI + AF+QF T+EEA AL S D +
Sbjct: 518 RTLYVNCIPPNANQAEDLLMHFEKFGRVVDVRIPPHSDRAFIQFATREEAESALASPD-A 576
Query: 66 KLVDRVISVEYALKDDSERD 85
+ +R I + +A +D D
Sbjct: 577 VMGNRFIRLSWANRDSINSD 596
>gi|413934995|gb|AFW69546.1| hypothetical protein ZEAMMB73_512754 [Zea mays]
Length = 283
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V R ERD+K +F +G V+ H R+ R FAFV +T EEA + ++
Sbjct: 67 TLYVTGLS-SRVTERDVKDYFSKHGRVVGCHVVLEPHTRVSRGFAFVSMDTVEEAERCIK 125
Query: 61 STDRSKLVDRVISVE 75
+ S + R I+VE
Sbjct: 126 YLNGSVMEGRNITVE 140
>gi|302759915|ref|XP_002963380.1| hypothetical protein SELMODRAFT_80254 [Selaginella moellendorffii]
gi|300168648|gb|EFJ35251.1| hypothetical protein SELMODRAFT_80254 [Selaginella moellendorffii]
Length = 161
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 65/145 (44%), Gaps = 33/145 (22%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R E+D++ +F G V+ R+ R F FV E+ ++A +
Sbjct: 20 PGNNLYVTGLS-TRVTEKDLEDYFSKEGKVVECRLVVDPRSHESRGFGFVALESLDDAER 78
Query: 58 ALESTDRSKLVDRVISVEYA-------------LKDDSERDDRYDSPRRGGYGR-HSP-- 101
++ S L R+I+VE A L SER RY SP RG Y R +SP
Sbjct: 79 CIKRLHHSNLEGRIITVEKARRSRARTPTPGKYLGSRSERSPRY-SPYRGDYDRSYSPPP 137
Query: 102 ------YGRSPSPAYRRRPSPDYGR 120
Y RSP P+YRR P Y R
Sbjct: 138 YRHRREYDRSP-PSYRRSPPSYYHR 161
>gi|260791540|ref|XP_002590787.1| hypothetical protein BRAFLDRAFT_218629 [Branchiostoma floridae]
gi|229275983|gb|EEN46798.1| hypothetical protein BRAFLDRAFT_218629 [Branchiostoma floridae]
Length = 637
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K L+V N + E I+ FEPYG V V+ +++AFV FE +E+A KA+E + +
Sbjct: 330 VKVLYVRNL-AVEAAEEIIQAKFEPYGTVERVKKIKDYAFVHFENREDAIKAMEDLNGKE 388
Query: 67 LVDRVISVEYA 77
L + + A
Sbjct: 389 LEGSAMEISLA 399
>gi|432921337|ref|XP_004080108.1| PREDICTED: RNA-binding protein 4B-like [Oryzias latipes]
Length = 344
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P E +IK FE YG V I +NFAFV E ++ ATKA+++ + L
Sbjct: 4 IFVGNL-PREATEEEIKALFEEYGAVTECAIIKNFAFVHMEDRKAATKAIKNLHQHSLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TAINVE 68
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 14 NFDPIRTR--------ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
NF P++ + +++ FE YG V + +NFAFV +EA A++ D S
Sbjct: 74 NFGPVKIHVANVEKGCDEELRALFEEYGTVSECAVVKNFAFVHMPNYDEAMDAIKELDNS 133
Query: 66 KLVDRVISVE 75
++ I V+
Sbjct: 134 DFQEKRIHVQ 143
>gi|320169942|gb|EFW46841.1| hypothetical protein CAOG_04799 [Capsaspora owczarzaki ATCC 30864]
Length = 313
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL VI P+ TRE D++ F +G V+ H R FAF+ E +E+A A+
Sbjct: 59 TLCVIGLSPL-TREADLESKFARFGKVVRCDVVRDPHTNDSRGFAFIGMENEEQAHAAIR 117
Query: 61 STDRSKLVDRVISVEYALK 79
R++ R ISVE ++
Sbjct: 118 GCHRTEFDGRTISVEKLVE 136
>gi|209875787|ref|XP_002139336.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209554942|gb|EEA04987.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 266
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P+ TL+V +RT+E D++R FE YG V R+ N F FV EEA +
Sbjct: 76 PSSTLYVCRLS-LRTKEDDLRRLFEEYGKVTDCRLVTNPLSGESRCFGFVTMSCPEEAAR 134
Query: 58 ALESTDRSKLVDRVISVEYA 77
A ++ D + D + VE A
Sbjct: 135 ARDALDCKEYQDANLKVEMA 154
>gi|226496087|ref|NP_001149397.1| transformer-2 protein [Zea mays]
gi|194702282|gb|ACF85225.1| unknown [Zea mays]
gi|195626954|gb|ACG35307.1| transformer-2 protein [Zea mays]
gi|413934993|gb|AFW69544.1| Transformer-2 protein [Zea mays]
Length = 280
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V R ERD+K +F +G V+ H R+ R FAFV +T EEA + ++
Sbjct: 64 TLYVTGLS-SRVTERDVKDYFSKHGRVVGCHVVLEPHTRVSRGFAFVSMDTVEEAERCIK 122
Query: 61 STDRSKLVDRVISVE 75
+ S + R I+VE
Sbjct: 123 YLNGSVMEGRNITVE 137
>gi|361124379|gb|EHK96478.1| putative Uncharacterized RNA-binding protein C25G10.01 [Glarea
lozoyensis 74030]
Length = 296
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG+V H + R F FV+ ET E+A
Sbjct: 76 PGSNLFVTGIHP-RLSEVEVTRLFEKYGDVEKCQIMLDPHTKESRGFGFVKMETAEQADA 134
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
A E + R +S+E A + + D R+ P GG
Sbjct: 135 AKEGLQGEVIEGRTLSIEKARRSRPQEDPRH-GPSGGG 171
>gi|325302612|tpg|DAA34674.1| TPA_inf: alternative splicing factor SRp55/B52/SRp75 [Amblyomma
variegatum]
Length = 281
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 18/116 (15%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD+ R F+ YG V + ++ F FV+FE +A A++ + +L+ +SVE A
Sbjct: 13 QVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKELLGERVSVELA- 71
Query: 79 KDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR-RRPSPDYGRGRSPAYDRYNGPV 133
RRG P GR +P R R P GR +P R+ PV
Sbjct: 72 ----------HGSRRG------PGGRIVAPGSRDWRSPPGGGRFNAPRESRFGPPV 111
>gi|326430672|gb|EGD76242.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 765
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALEST 62
LFV NF+ T E D+++ FE G+V+ V++ R+ F FV F T+EEA A+
Sbjct: 440 LFVKNFNENVTEE-DLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAKK 498
Query: 63 DRSKLVDRVISVEYAL 78
+R L DR I V + L
Sbjct: 499 NRQPLQDRPIYVAFHL 514
>gi|310790609|gb|EFQ26142.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 357
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E+++ R FE YG+V H + R F FV+ T ++A
Sbjct: 78 PGSNLFVTGIHP-RLTEQEVTRMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQADA 136
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 137 AKEGLQGEQIEGRTLSIEKA 156
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALESTDRSK 66
T+FV DP E +++ F PYG ++HV+I + FVQF T+ A +AL S + ++
Sbjct: 283 TIFVGGLDPT-VAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQ 341
Query: 67 LVDRVISVEYALKDDSERDDR 87
L + I + + S++ D+
Sbjct: 342 LGGQSIRLSWGRSPSSKQTDQ 362
>gi|302694499|ref|XP_003036928.1| hypothetical protein SCHCODRAFT_63824 [Schizophyllum commune H4-8]
gi|300110625|gb|EFJ02026.1| hypothetical protein SCHCODRAFT_63824 [Schizophyllum commune H4-8]
Length = 259
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
PT+ L V IRT ERD+ F +G V V I R F F++ T EEAT+
Sbjct: 75 PTQVLGVFGLS-IRTEERDLDEEFSRFGTVEKVTIVYDQRSGRSRGFGFIRMSTVEEATR 133
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
++ + L R I V+Y++ D
Sbjct: 134 CIQELNGIDLNGRNIRVDYSVTD 156
>gi|407040620|gb|EKE40231.1| RNA recognition motif domain containing protein [Entamoeba nuttalli
P19]
Length = 326
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
KTL+V + D + E +K F PYGNV++ I+++ +AF++++ E+A KA
Sbjct: 37 MKTLYVSDVD-VSIDENKLKELFSPYGNVINSTIKKSSKGTNDFYYAFIEYDRPEDAAKA 95
Query: 59 LESTDRSKLVDRVISVEYA 77
L D+ +L + ++V++A
Sbjct: 96 LREMDQHELAGKRLNVKFA 114
>gi|148222587|ref|NP_001079614.1| RNA binding motif protein 14 [Xenopus laevis]
gi|80477004|gb|AAI08787.1| MGC52864 protein [Xenopus laevis]
Length = 467
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D RT + +I FE YG V++ + + +AFV EEATKA+E + +L
Sbjct: 10 IFVGNVDD-RTTQEEITELFERYGTVVNCAVMKQYAFVHMRGAEEATKAVEDLNGRELNG 68
Query: 70 RVISVE 75
+ + VE
Sbjct: 69 KKMLVE 74
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T +FV N +I++ FE YG V+ I +++AFV + EA A+E+ + +
Sbjct: 83 TWKIFVGNVSS-SCEGSEIRKIFEEYGRVVECDIVKDYAFVHMTRESEARAAIEALNGKE 141
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS---PAYRRRPSPDYGRGRS 123
+ + I+VE + K +R G S +GR + A + R S ++ R
Sbjct: 142 IKGKRINVEMSHK-----------VQRSGTSNGSSHGRRRTDDREAPQSRESYNHRRATE 190
Query: 124 PAYDRYNGPVYDQRRSPDHGRH-------RSPVPVYDRRRSPDYGRNRSP 166
AY Y +R +P+ R+ R P P+Y Y R+RSP
Sbjct: 191 AAYASYALKSGYERYAPESSRYDLYESRPRPPSPLY-------YARDRSP 233
>gi|449017398|dbj|BAM80800.1| similar to SR family splicing factor SC35 [Cyanidioschyzon merolae
strain 10D]
Length = 194
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALES 61
L V N P TR+ D+ F PYG+V+ + I R FAFV+ +T E+A A+ +
Sbjct: 71 LMVRNI-PFGTRQEDLLELFRPYGDVIDIFIPWDRQLRRIRGFAFVRLQTLEQAEAAIAA 129
Query: 62 TDRSKLVDRVISVEYA 77
D S + +R+I+V+ A
Sbjct: 130 LDGSTMRERIIAVKRA 145
>gi|291385687|ref|XP_002709446.1| PREDICTED: RNA binding motif protein 47-like isoform 1 [Oryctolagus
cuniculus]
Length = 591
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A +A+ S +
Sbjct: 246 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVRAMNSLNG 304
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
++L + V A D E+ RY +GG
Sbjct: 305 TELEGSCLEVTLAKPVDKEQYSRYQKAAKGG 335
>gi|28175406|gb|AAH45210.1| MGC52864 protein [Xenopus laevis]
Length = 460
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D RT + +I FE YG V++ + + +AFV EEATKA+E + +L
Sbjct: 3 IFVGNVDD-RTTQEEITELFERYGTVVNCAVMKQYAFVHMRGAEEATKAVEDLNGRELNG 61
Query: 70 RVISVE 75
+ + VE
Sbjct: 62 KKMLVE 67
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T +FV N +I++ FE YG V+ I +++AFV + EA A+E+ + +
Sbjct: 76 TWKIFVGNVSS-SCEGSEIRKIFEEYGRVVECDIVKDYAFVHMTRESEARAAIEALNGKE 134
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPS---PAYRRRPSPDYGRGRS 123
+ + I+VE + K +R G S +GR + A + R S ++ R
Sbjct: 135 IKGKRINVEMSHK-----------VQRSGTSNGSSHGRRRTDDREAPQSRESYNHRRATE 183
Query: 124 PAYDRYNGPVYDQRRSPDHGRH-------RSPVPVYDRRRSPDYGRNRSP 166
AY Y +R +P+ R+ R P P+Y Y R+RSP
Sbjct: 184 AAYASYALKSGYERYAPESSRYDLYESRPRPPSPLY-------YARDRSP 226
>gi|440793266|gb|ELR14453.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 273
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P TL+V RTRE D++R F +G V+ + R FAFV + EA
Sbjct: 99 PGDTLYVTGLAS-RTREADLERKFSKFGEVVKAHLVCDPRTGDSRGFAFVTMGSDTEAQD 157
Query: 58 ALESTDRSKLVDRVISVE 75
A+E +R++L R+ISVE
Sbjct: 158 AMEGGNRTELDGRIISVE 175
>gi|121711495|ref|XP_001273363.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
gi|119401514|gb|EAW11937.1| transformer-SR ribonucleoprotein, putative [Aspergillus clavatus
NRRL 1]
Length = 311
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV +P R E DI R FE YG+V H + R F FV+ T E+A
Sbjct: 66 PGSNLFVTGINP-RLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADA 124
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 125 AKEGLQGEVIEGRTLSIEKA 144
>gi|359478878|ref|XP_002280779.2| PREDICTED: uncharacterized protein LOC100246735 [Vitis vinifera]
Length = 330
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +R++++HF G+V V + R F FV T EEA
Sbjct: 45 ENPGNNLYVTGLS-TRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEA 103
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ ++ DRS L RVI+VE A
Sbjct: 104 NRCIKYLDRSVLEGRVITVEKA 125
>gi|388505636|gb|AFK40884.1| unknown [Lotus japonicus]
Length = 344
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R +R++++HF G V+ V + R F FV +T E+A
Sbjct: 44 ENPGNNLYVTGLSP-RITKRELEKHFATEGKVIDVHLVVDPWTRESRGFGFVTMDTLEDA 102
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ ++ +RS L RVI+VE A
Sbjct: 103 NRCVKYLNRSVLEGRVITVEKA 124
>gi|326429915|gb|EGD75485.1| poly(A)-binding protein [Salpingoeca sp. ATCC 50818]
Length = 1688
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALEST 62
LFV NF+ E D+++ FE G+V+ V++ R+ F FV F T+EEA A+
Sbjct: 609 LFVKNFNE-NVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAESAIAKK 667
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY 96
+R L DR I V + L + P++G Y
Sbjct: 668 NRQTLQDRPIYVAFHLTRQERCKQQPQHPQQGVY 701
>gi|336373181|gb|EGO01519.1| hypothetical protein SERLA73DRAFT_120183 [Serpula lacrymans var.
lacrymans S7.3]
Length = 210
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFET 51
M P+ L V IRT+ERD+ F +G V V I R F F++ T
Sbjct: 1 MQAPNPSNVLGVFGLS-IRTQERDLDEEFSRFGRVEKVTIVYDQRQSDRSRGFGFIKMST 59
Query: 52 QEEATKALESTDRSKLVDRVISVEYALKD 80
EEAT+ ++ + L R I V+Y++ D
Sbjct: 60 VEEATRCIQELNGVDLNGRRIRVDYSVTD 88
>gi|147791022|emb|CAN63579.1| hypothetical protein VITISV_029585 [Vitis vinifera]
Length = 241
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +R++++HF G+V V + R F FV T EEA
Sbjct: 45 ENPGNNLYVTGLS-TRVTKRELEKHFASEGSVADVHLVTDPWTRESRGFGFVTMSTVEEA 103
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ ++ DRS L RVI+VE A
Sbjct: 104 NRCIKYLDRSVLEGRVITVEKA 125
>gi|221122094|ref|XP_002156057.1| PREDICTED: uncharacterized protein LOC100210881 [Hydra
magnipapillata]
Length = 276
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
PTK ++V N P +++ F PYG V + + +NFAFV F +E+A A++ +S
Sbjct: 2 PTK-VYVGNL-PDNCNPDNLRGLFGPYGEVNELTVIKNFAFVHFAREEDANNAVQDLHKS 59
Query: 66 KLVDRVISVEYALKDDSERDDR 87
K++ + I+VE + ++ DR
Sbjct: 60 KMLGQQITVEISKSRSKDKKDR 81
>gi|29893585|gb|AAP06839.1| putative transformer serine/arginine-rich ribonucleoprotein
[Oryza sativa Japonica Group]
gi|125585702|gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group]
Length = 324
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +RD+++HF G V+ I R F FV T +EA
Sbjct: 16 ENPGNNLYVTGLS-ARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEA 74
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 75 DLCIKYLDRSVLEGRVITVEKA 96
>gi|351713281|gb|EHB16200.1| RNA-binding protein 47 [Heterocephalus glaber]
Length = 585
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 241 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMSNLNG 299
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
++L + V A D E+ RY +GG G + PS Y P
Sbjct: 300 TELEGSCLEVTLAKPVDKEQYSRYQKAAKGG-GVAEAVAQPPSYVYSCDP 348
>gi|336386026|gb|EGO27172.1| hypothetical protein SERLADRAFT_434943 [Serpula lacrymans var.
lacrymans S7.9]
Length = 284
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ L V IRT+ERD+ F +G V V I R F F++ T EEAT+
Sbjct: 81 PSNVLGVFGLS-IRTQERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVEEATR 139
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
++ + L R I V+Y++ D
Sbjct: 140 CIQELNGVDLNGRRIRVDYSVTD 162
>gi|18605943|gb|AAH22960.1| BC022960 protein, partial [Mus musculus]
Length = 368
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRRRPSPDYGR 120
DRS R S +YA +R +Y R Y R S Y R S Y R SP Y R
Sbjct: 10 DRSSQYARDRSSQYA----RDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRSPQYAR 65
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
RS Y R P Y + RSP + R RS P Y R RS Y R+RSP + R R
Sbjct: 66 DRSSHYARDRSPHYARDRSPHYARDRS--PHYARDRSSHYARDRSPQYARDR 115
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 98 RHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRS 157
R S Y R SP Y R SP Y R RSP Y R Y + RSP + R RS Y R RS
Sbjct: 67 RSSHYARDRSPHYARDRSPHYARDRSPHYARDRSSHYARDRSPQYARDRS--SQYARDRS 124
Query: 158 PDYGRNRSPNFGRYR 172
Y R+RS ++ R R
Sbjct: 125 SHYARDRSSHYARDR 139
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 102 YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP------VPVYDRR 155
Y R S Y R S Y R RS Y R Y + RS + R RS P Y R
Sbjct: 7 YARDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRSPQYARD 66
Query: 156 RSPDYGRNRSPNFGRYR 172
RS Y R+RSP++ R R
Sbjct: 67 RSSHYARDRSPHYARDR 83
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 107 SPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSP 166
SP Y R S Y R RS Y R Y + RS + R RS Y R RS Y R+RSP
Sbjct: 4 SPQYARDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRS--SQYARDRSSQYARDRSP 61
Query: 167 NFGRYR 172
+ R R
Sbjct: 62 QYARDR 67
>gi|125543223|gb|EAY89362.1| hypothetical protein OsI_10866 [Oryza sativa Indica Group]
Length = 324
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +RD+++HF G V+ I R F FV T +EA
Sbjct: 16 ENPGNNLYVTGLS-ARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEA 74
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 75 DLCIKYLDRSVLEGRVITVEKA 96
>gi|47229936|emb|CAG10350.1| unnamed protein product [Tetraodon nigroviridis]
Length = 243
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE E
Sbjct: 74 ANPDPNSCLGVFGLS-LYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENSE 132
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRR 113
++ +A E + +L R I V+Y++ R +P G Y YG S R+
Sbjct: 133 DSKEAKEHANGMELDGRRIRVDYSIT------KRAHTPTPGIYMGRPTYGSS------RQ 180
Query: 114 PSPDYGRGRSPAYDR 128
S DY RG YDR
Sbjct: 181 SSRDYYRGYDRGYDR 195
>gi|108707341|gb|ABF95136.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 347
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +RD+++HF G V+ I R F FV T +EA
Sbjct: 39 ENPGNNLYVTGLS-ARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEA 97
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 98 DLCIKYLDRSVLEGRVITVEKA 119
>gi|108707340|gb|ABF95135.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 346
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V R +RD+++HF G V+ I R F FV T +EA
Sbjct: 38 ENPGNNLYVTGLS-ARVTDRDLEKHFSAEGEVIDASIVLDPWTRESRGFGFVTMATVKEA 96
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ DRS L RVI+VE A
Sbjct: 97 DLCIKYLDRSVLEGRVITVEKA 118
>gi|50415109|gb|AAH77356.1| LOC398498 protein [Xenopus laevis]
Length = 471
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D RT E ++ FE YG VL+ + R +AFV EATKA+E + +L
Sbjct: 10 IFVGNIDE-RTSEGEVTALFERYGAVLNCAVMRQYAFVHMRGTREATKAVEELNGRELNG 68
Query: 70 RVISVEYA 77
+ + VE +
Sbjct: 69 KKMLVELS 76
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T +FV N +I++ FE YG VL I +++AFV + EA A+E+ +
Sbjct: 83 TWKIFVGNVSS-SCEAAEIRKIFEEYGRVLECDIVKDYAFVHMTRESEARAAIEALNGKD 141
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAY 126
+ + I+VE S + R G + R P R A + R S ++ R AY
Sbjct: 142 IKGKRINVEM-----SNKVQRSGGANGGSHSRRRPDDRE---APQSRESYNHRRATEAAY 193
Query: 127 DRYNGPVYDQRRSPDHGRH-------RSPVPVYDRRRSPDYGRNRSP 166
Y +RR+P+ R+ R PVY Y R+RSP
Sbjct: 194 ASYKSNY--ERRAPEPSRYDPYESRPRPQSPVY-------YARDRSP 231
>gi|402226431|gb|EJU06491.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 304
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
+ T L V +RT ERD++ F YG V HV I R F F+Q T E+AT
Sbjct: 69 KATNVLGVFGL-SVRTVERDLEELFNQYGTVEHVTIVYDQRSDRSRGFGFIQMATVEDAT 127
Query: 57 KALESTDRSKLVDRVISVEYALKD 80
K + + + R I V+Y++ +
Sbjct: 128 KCISELNGRDVNGRNIRVDYSVTE 151
>gi|430813261|emb|CCJ29365.1| unnamed protein product [Pneumocystis jirovecii]
Length = 272
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
+A + P LF+ P R E++++ F +GNV+ I R F FV T
Sbjct: 59 VAAENPGTNLFISGIAP-RMDEKELEEIFSRFGNVVKCSIVSDPYTKESRGFGFVTMATP 117
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
E+A KA+E+ + + RV SVE A
Sbjct: 118 EDADKAIEAANGQEYYGRVFSVEKA 142
>gi|195492484|ref|XP_002094011.1| GE21602 [Drosophila yakuba]
gi|194180112|gb|EDW93723.1| GE21602 [Drosophila yakuba]
Length = 371
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P+ TRE ++ +PYG VL +++N+ FVQFET+E A KA + +S
Sbjct: 22 IFLGNL-PVCTRE-ELVSICQPYGKVLGSMVQKNYGFVQFETEELANKAASALHKSTFKQ 79
Query: 70 RVISVEYA-LKDDSERDDRYDSPRRGG 95
V++V A +K + + +P +G
Sbjct: 80 NVLTVRNASVKSKAANANAKRNPNQGA 106
>gi|198424368|ref|XP_002126535.1| PREDICTED: similar to Ras GTPase-activating protein-binding protein
2 (G3BP-2) (GAP SH3 domain-binding protein 2) [Ciona
intestinalis]
Length = 460
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR------NFAFVQFETQEEATKALE 60
+ +FV N PI +E D+K HF +GNVL VRI +F FV FE+ K LE
Sbjct: 334 NQQIFVGNL-PIDIKEADLKNHFAEFGNVLEVRINHSHSNNPSFGFVIFESPSAVEKVLE 392
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
++ I++E + ++ R PRRG
Sbjct: 393 IMPTQYKNNQRINIEEKKQRNARDARRGGDPRRGA 427
>gi|158828228|gb|ABW81106.1| putRNAbp29 [Cleome spinosa]
Length = 338
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P +L+V R +RD++ HF G V+ V + R F FV E E+A
Sbjct: 40 ENPGNSLYVTGLS-HRVTKRDLEDHFSKEGKVVDVNLVLDPWTRESRGFGFVTMENMEDA 98
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ ++ DRS L R+I+VE A
Sbjct: 99 NRCIKYLDRSVLEGRIITVEKA 120
>gi|28302297|gb|AAH46684.1| LOC398498 protein, partial [Xenopus laevis]
Length = 531
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N D RT E ++ FE YG VL+ + R +AFV EATKA+E + +L
Sbjct: 70 IFVGNIDE-RTSEGEVTALFERYGAVLNCAVMRQYAFVHMRGTREATKAVEELNGRELNG 128
Query: 70 RVISVEYA 77
+ + VE +
Sbjct: 129 KKMLVELS 136
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T +FV N +I++ FE YG VL I +++AFV + EA A+E+ +
Sbjct: 143 TWKIFVGNVSS-SCEAAEIRKIFEEYGRVLECDIVKDYAFVHMTRESEARAAIEALNGKD 201
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAY 126
+ + I+VE S + R G + R P R A + R S ++ R AY
Sbjct: 202 IKGKRINVEM-----SNKVQRSGGANGGSHSRRRPDDRE---APQSRESYNHRRATEAAY 253
Query: 127 DRYNGPVYDQRRSPDHGRH-------RSPVPVYDRRRSPDYGRNRSP 166
Y +RR+P+ R+ R PVY Y R+RSP
Sbjct: 254 ASYKSNY--ERRAPEPSRYDPYESRPRPQSPVY-------YARDRSP 291
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 4 MTDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 61
Query: 58 ALESTDRSKLVDRVISVEYALK--DDSERDDRYDSPRRGGYGRHS 100
A + + S+L+ + VE + S R + RRG +GRHS
Sbjct: 62 ACDILNGSELLGSQLRVEISKGRPRQSRRGGSSERGRRGDFGRHS 106
>gi|380019771|ref|XP_003693776.1| PREDICTED: uncharacterized protein LOC100869186 [Apis florea]
Length = 643
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDMTKLELEEHFSKYGTVVGSSINRGFGFVQFEEEQSAQKAIQNEDGAMFKG 75
Query: 70 RVISVEYALKDD 81
R I V A KD+
Sbjct: 76 RRIDVRPAKKDN 87
>gi|119482882|ref|XP_001261469.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
gi|119409624|gb|EAW19572.1| transformer-SR ribonucleoprotein, putative [Neosartorya fischeri
NRRL 181]
Length = 307
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E DI R FE YG+V H + R F FV+ T E+A
Sbjct: 65 PGSNLFVTGIHP-RLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADA 123
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 124 AKEGLQGEVIEGRTLSIEKA 143
>gi|70986996|ref|XP_748983.1| transformer-SR ribonucleoprotein [Aspergillus fumigatus Af293]
gi|66846613|gb|EAL86945.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
Af293]
gi|159123248|gb|EDP48368.1| transformer-SR ribonucleoprotein, putative [Aspergillus fumigatus
A1163]
Length = 304
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E DI R FE YG+V H + R F FV+ T E+A
Sbjct: 65 PGSNLFVTGIHP-RLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADA 123
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 124 AKEGLQGEVIEGRTLSIEKA 143
>gi|66549578|ref|XP_623710.1| PREDICTED: hypothetical protein LOC551309 [Apis mellifera]
Length = 645
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDMTKLELEEHFSKYGTVVGSSINRGFGFVQFEEEQSAQKAIQNEDGAMFKG 75
Query: 70 RVISVEYALKDD 81
R I V A KD+
Sbjct: 76 RRIDVRPAKKDN 87
>gi|410898649|ref|XP_003962810.1| PREDICTED: transformer-2 protein homolog beta-like [Takifugu
rubripes]
Length = 277
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 60/135 (44%), Gaps = 21/135 (15%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FET E
Sbjct: 108 ANPDPNNCLGVFGLS-LYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFETSE 166
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRR 113
++ +A E + +L R I V++++ R +P G Y YG S R+
Sbjct: 167 DSKEAKEHANGMELDGRRIRVDFSIT------KRAHTPTPGIYMGRPTYGSS------RQ 214
Query: 114 PSPDYGRGRSPAYDR 128
S DY +G YDR
Sbjct: 215 SSRDYYKGYDRGYDR 229
>gi|296196676|ref|XP_002745942.1| PREDICTED: RNA-binding protein 47 isoform 1 [Callithrix jacchus]
Length = 594
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
++L + V A D E+ RY RGG + + PS Y P
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRYQKAARGGSAAEA--AQQPSYVYSCDP 351
>gi|310799153|gb|EFQ34046.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 1112
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALEST 62
L V N DP+ E D+++ F YG V + I RN A+V+ ET+E+A A+
Sbjct: 765 LHVTNLDPLAV-EDDVEKAFSKYGTVKRISILRNKAGKGHGAAYVEMETKEQAQTAVSEL 823
Query: 63 DRSKLVDRVISVEYA 77
D++KL +++V+ +
Sbjct: 824 DKAKLRSSIMTVQIS 838
>gi|194865544|ref|XP_001971482.1| GG14412 [Drosophila erecta]
gi|190653265|gb|EDV50508.1| GG14412 [Drosophila erecta]
Length = 371
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 3/87 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N PI TRE ++ +PYG VL +++N+ FVQFET+E A KA + +S
Sbjct: 22 IFLGNL-PICTRE-ELVSICQPYGKVLGSMVQKNYGFVQFETEELANKAAFALHKSTFKQ 79
Query: 70 RVISVEYA-LKDDSERDDRYDSPRRGG 95
V++V A +K + + +P +G
Sbjct: 80 NVLTVRNASIKSKAANANAKRNPNQGA 106
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
P LFV T E+ + F YG VL RI + F FV + T EEA
Sbjct: 40 STPNTKLFVGGIS-YNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEA 98
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ A+++ D L R + V +A
Sbjct: 99 SSAIQALDGQDLYGRRVGVNFA 120
>gi|403300669|ref|XP_003941042.1| PREDICTED: RNA-binding protein 47 [Saimiri boliviensis boliviensis]
Length = 631
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP 114
++L + V A D E+ RY RGG + + PS Y P
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRYQKAARGGSAAEA--AQQPSYVYSCDP 351
>gi|346468507|gb|AEO34098.1| hypothetical protein [Amblyomma maculatum]
Length = 280
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD+ R F+ YG V + ++ F FV+FE +A A++ + +L+ +SVE A
Sbjct: 13 QVRERDVDRFFKGYGRVGDIHLKNGFGFVEFEDHRDADDAIKDLNGKELLGERVSVELA- 71
Query: 79 KDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPV 133
RRG P GR +P R SP GR +P R+ PV
Sbjct: 72 ----------HGSRRG------PGGRIVAPGSRDWRSPP-GRFNAPRESRFGPPV 109
>gi|348684206|gb|EGZ24021.1| hypothetical protein PHYSODRAFT_481443 [Phytophthora sojae]
Length = 519
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
+LF+ + P + RE D++ F+ YG++ V I +R F FV F QE AL T K
Sbjct: 379 SLFIRDV-PTQARENDLRELFKGYGSIAGVSIPGQRGFGFVDFHEQESMRAALAETKEFK 437
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGY 96
L ++V+ V ER +R + +RGG+
Sbjct: 438 LFEKVLQV-------GERAERKEG-QRGGF 459
>gi|307190544|gb|EFN74531.1| Nuclear receptor coactivator 5 [Camponotus floridanus]
Length = 672
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDVTKLELEEHFSKYGTVIASIINRGFGFVQFEDEQSAQKAIQNEDGALFKG 75
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGR 122
R I V A KD+ + +S + G ++ + S + + + +G +
Sbjct: 76 RRIDVRPAKKDNQSGGNAGNSNAKQMSGLNNQF-NSMNNQFSNAATDSFGTNK 127
>gi|410080061|ref|XP_003957611.1| hypothetical protein KAFR_0E03240 [Kazachstania africana CBS 2517]
gi|372464197|emb|CCF58476.1| hypothetical protein KAFR_0E03240 [Kazachstania africana CBS 2517]
Length = 381
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T LFV F P+ +E ++ F P+G + V+I FAFV+FE + A +A+E +
Sbjct: 87 TTRLFVRPF-PLDVQESELNEIFSPFGPMKEVKILNGFAFVEFEESDSAARAIEEVNGKS 145
Query: 67 LVDRVISVEYA 77
++ + V Y+
Sbjct: 146 FANQPLEVVYS 156
>gi|301101882|ref|XP_002900029.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
gi|262102604|gb|EEY60656.1| RNA-binding protein, putative [Phytophthora infestans T30-4]
Length = 588
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALESTDRSK 66
TL V + DP + HF +GNV++V++R AFVQ+ T+EEA KA S
Sbjct: 271 TLHVRHVDPKYVNMTMLSLHFSKFGNVVNVQMRPSAKCAFVQYATEEEAKKAFHSP-LPV 329
Query: 67 LVDRVISVEYALKDDSERDDRYDSP 91
+R ISV++A D ++ D P
Sbjct: 330 CNNRFISVKWARHDAQSPEEAVDQP 354
>gi|403347285|gb|EJY73063.1| RNA-binding protein 34 [Oxytricha trifallax]
Length = 412
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 9/78 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR---NF-----AFVQFETQEEATKALE 60
T+F+ N P + D++ HFE G +L+VR+ R NF A+VQF+T+EE K++E
Sbjct: 230 TIFIGNL-PWVLNDEDLRAHFEDCGKILNVRVVRDKDNFIGKGIAYVQFKTKEEMRKSIE 288
Query: 61 STDRSKLVDRVISVEYAL 78
+ +RS R + ++ A+
Sbjct: 289 TKNRSLFRGRELRIKKAV 306
>gi|357483947|ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago truncatula]
gi|355513595|gb|AES95218.1| Scaffold attachment factor B1 [Medicago truncatula]
Length = 303
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATKALE 60
TL+V R ERD++ HF G V RI R FAFV +T E+A + ++
Sbjct: 132 TLYVTGLS-SRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTAEDANRCIK 190
Query: 61 STDRSKLVDRVISVE 75
++S L R I+VE
Sbjct: 191 YLNQSILEGRYITVE 205
>gi|291385689|ref|XP_002709447.1| PREDICTED: RNA binding motif protein 47-like isoform 2 [Oryctolagus
cuniculus]
Length = 522
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A +A+ S +
Sbjct: 246 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVRAMNSLNG 304
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
++L + V A D E+ RY +GG
Sbjct: 305 TELEGSCLEVTLAKPVDKEQYSRYQKAAKGG 335
>gi|393247796|gb|EJD55303.1| hypothetical protein AURDEDRAFT_109681 [Auricularia delicata
TFB-10046 SS5]
Length = 523
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+P K +++ N P +TRE D++ F G + + ++ + FV+FETQE A +++
Sbjct: 88 KPNK-VYIGNL-PEQTRESDLQSCFGKIGRIASIELKFGYGFVEFETQEAAEESVAKYHE 145
Query: 65 SKLVDRVISVEYALKDDSERDDR----YDSPRRGGYGRHSPYG 103
+ I VE + + + D+ + + G + R P+G
Sbjct: 146 GWFMGNKIKVEISRGRNKGKGDQPGACFKCGQMGHWARECPHG 188
>gi|170087376|ref|XP_001874911.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650111|gb|EDR14352.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 297
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R D+ + F+ YG ++ R+ F FV+FE ++A A+ + + + I VE+
Sbjct: 11 PTDARSDDVSKFFDGYGRIIDCRVMTGFGFVEFENAKDAEDAVHNFNGKPFMGVNIVVEF 70
Query: 77 ALKDDSERDDRYDSPRRGGYGRHSPYGRSP 106
A K+ R + YD+ R GG G +P R P
Sbjct: 71 A-KESRPRREVYDNDRGGG-GHGAPRSRRP 98
>gi|328874161|gb|EGG22527.1| Zinc finger protein [Dictyostelium fasciculatum]
Length = 1780
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 9/99 (9%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
T+ V F IR RE D+K FE YG V + +I R F FV + T EEA +A+
Sbjct: 246 TIHVAGFG-IRIREDDLKEKFEVYGKVKSCSVLVDPNTKISRGFGFVTYATSEEADEAIR 304
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRH 99
D +K+ I V+ + + + R PR G +
Sbjct: 305 LMDGTKIDGYPIKVQKLIDSTNNKGSRRSKPRDSTPGSY 343
>gi|239609512|gb|EEQ86499.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327350257|gb|EGE79114.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 315
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 67/169 (39%), Gaps = 54/169 (31%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 73 NLFVTGIHP-RLTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKE 131
Query: 61 STDRSKLVDRVISVEYALKD-------------------------DSERDDRYDSPRRGG 95
+ R +S+E A + R DRYD RRGG
Sbjct: 132 GLQGEVIEGRTLSIEKARRGRPRTPTPGKYFGPPKRGTAFGRGPPRGGRYDRYDD-RRGG 190
Query: 96 YGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGR 144
YG + GR P +YR YGR YD YN RS D+GR
Sbjct: 191 YG--ASGGRRPDDSYR------YGR-----YDSYN------ERSRDYGR 220
>gi|344242066|gb|EGV98169.1| RNA-binding protein 28 [Cricetulus griseus]
Length = 778
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F PYG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKTAFTPYGTVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDSPRRG 94
++V++A+ D +D + S G
Sbjct: 184 VAVDWAVAKDKYKDTQPASAPDG 206
>gi|340914863|gb|EGS18204.1| hypothetical protein CTHT_0062190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 344
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P R E +I R FE YG V +I R+ F FV+ T E+A
Sbjct: 70 PGSNLFVTGIHP-RLEESEITRLFEKYGEVEKCQIMRDPHTGESRGFGFVKMMTSEQAEA 128
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+E + R +++E A
Sbjct: 129 AMEGLKGEIIEGRTLNIEKA 148
>gi|327405345|ref|YP_004346183.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
gi|327320853|gb|AEA45345.1| RNP-1 like RNA-binding protein [Fluviicola taffensis DSM 16823]
Length = 224
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 62/149 (41%), Gaps = 36/149 (24%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
++FV D T E +K FE YG V V I R FAFV+ + EA KA+E
Sbjct: 3 SIFVAKLD-FNTTEEQLKSLFEDYGKVNRVTIAKDRETGKPRGFAFVEMADESEADKAIE 61
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
+ D S + R I+V+ A DDR + G S PA+R
Sbjct: 62 ALDDSSVNGRNIAVKKA-------DDRASGGKPSGDNNRS----GDRPAFR--------- 101
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPV 149
P DR GP D + PD GR PV
Sbjct: 102 ---PREDR--GPGSDSK--PDEGRPSKPV 123
>gi|261196578|ref|XP_002624692.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239595937|gb|EEQ78518.1| transformer-SR ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
Length = 312
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 67/169 (39%), Gaps = 54/169 (31%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 70 NLFVTGIHP-RLTESDVSRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTSEQADAAKE 128
Query: 61 STDRSKLVDRVISVEYALKD-------------------------DSERDDRYDSPRRGG 95
+ R +S+E A + R DRYD RRGG
Sbjct: 129 GLQGEVIEGRTLSIEKARRGRPRTPTPGKYFGPPKRGTAFGRGPPRGGRYDRYDD-RRGG 187
Query: 96 YGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGR 144
YG + GR P +YR YGR YD YN RS D+GR
Sbjct: 188 YG--ASGGRRPDDSYR------YGR-----YDSYN------ERSRDYGR 217
>gi|448096991|ref|XP_004198563.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359379985|emb|CCE82226.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 280
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 10 LFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
+FV + FD R + ++ HF+ G + V++ R FAFV FE++E+A KA+E+ D S+
Sbjct: 7 IFVRPLGFDVEREK---LEAHFQDIGPITDVQLMRGFAFVTFESEEDAKKAVETLDNSEF 63
Query: 68 VDRVISVEYA 77
+ + +E+A
Sbjct: 64 DGQPLQIEFA 73
>gi|391330800|ref|XP_003739841.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Metaseiulus occidentalis]
Length = 303
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKAL-ESTDRSKLVDRVISVEYA 77
RTRERD++R F PYG + + ++ FAFV+FE +A A E + L DR++ VE A
Sbjct: 17 RTRERDLERLFSPYGRIREILLKSGFAFVEFEDTRDAEDACYELNGKDLLGDRIV-VEMA 75
>gi|380489744|emb|CCF36497.1| transformer-SR ribonucleoprotein [Colletotrichum higginsianum]
Length = 330
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E+++ R FE YG+V H + R F FV+ T ++A
Sbjct: 78 PGSNLFVTGIHP-RLTEQEVTRMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQADA 136
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 137 AKEGLQGEQIEGRTLSIEKA 156
>gi|322695665|gb|EFY87469.1| transformer-SR ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 328
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P R E ++ + FE YG+V +I R+ F FV+ T E+A
Sbjct: 73 PGSNLFVTGIHP-RLTEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGFVKMVTSEQAEA 131
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 132 AKEGLQGEQIEGRTLSIEKA 151
>gi|448111013|ref|XP_004201740.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
gi|359464729|emb|CCE88434.1| Piso0_001939 [Millerozyma farinosa CBS 7064]
Length = 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 10 LFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
+FV + FD R + ++ HF+ G + V++ R FAFV FE++E+A KA+E+ D S+
Sbjct: 7 IFVRPLGFDVEREK---LEAHFQDIGPITDVQLMRGFAFVTFESEEDAKKAVETLDNSEF 63
Query: 68 VDRVISVEYA 77
+ + +E+A
Sbjct: 64 DGQPLQIEFA 73
>gi|41053933|ref|NP_956250.1| ras GTPase-activating protein-binding protein 1 [Danio rerio]
gi|28279661|gb|AAH45874.1| GTPase activating protein (SH3 domain) binding protein 1 [Danio
rerio]
Length = 477
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-----NFAFVQFETQEEATKALESTDR 64
LFV N P + ++K FE YG VL +RI NF FV F+ E K L +
Sbjct: 345 LFVGNV-PHDVDKNELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILNNRPI 403
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR----RRPSPDYGR 120
D ++VE + DR D RG G G S P R ++PS GR
Sbjct: 404 KLRGDVRLNVEEKKTRSAREGDRRDIRPRGPGGPRDRIGGSRGPPTRGGMAQKPSFGAGR 463
Query: 121 GRSPAYDRYNGP 132
G P+ RY GP
Sbjct: 464 GTGPSEGRYTGP 475
>gi|322709486|gb|EFZ01062.1| transformer-SR ribonucleoprotein, putative [Metarhizium anisopliae
ARSEF 23]
Length = 348
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P R E ++ + FE YG+V +I R+ F FV+ T E+A
Sbjct: 89 PGSNLFVTGIHP-RLSEAEVSKMFEKYGDVEKCQIMRDPHSKESRGFGFVKMVTSEQAEA 147
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 148 AKEGLQGEQIEGRTLSIEKA 167
>gi|40807189|gb|AAH65323.1| GTPase activating protein (SH3 domain) binding protein 1 [Danio
rerio]
Length = 477
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 10/132 (7%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-----NFAFVQFETQEEATKALESTDR 64
LFV N P + ++K FE YG VL +RI NF FV F+ E K L +
Sbjct: 345 LFVGNV-PHDVDKNELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILNNRPI 403
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR----RRPSPDYGR 120
D ++VE + DR D RG G G S P R ++PS GR
Sbjct: 404 KLRGDVRLNVEEKKTRSAREGDRRDIRPRGPGGPRDRIGGSRGPPTRGGMAQKPSFGAGR 463
Query: 121 GRSPAYDRYNGP 132
G P+ RY GP
Sbjct: 464 GTGPSEGRYTGP 475
>gi|340716455|ref|XP_003396713.1| PREDICTED: hypothetical protein LOC100643044 [Bombus terrestris]
Length = 646
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDMTKVELEEHFSKYGTVVGSSINRGFGFVQFEEEQSAQKAIQNEDGAMFKG 75
Query: 70 RVISVEYALKDD 81
R I V A KD+
Sbjct: 76 RRIDVRPAKKDN 87
>gi|123494973|ref|XP_001326638.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909555|gb|EAY14415.1| hypothetical protein TVAG_256070 [Trichomonas vaginalis G3]
Length = 405
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-----RRNF---AFVQFETQEEATKAL 59
+T+++ N P T E ++K FE YG ++ ++ R F FV ET+E+A KA+
Sbjct: 9 RTVYIGNL-PFSTSELEVKTLFEVYGKIIKMKTLNQTNSRQFHGVMFVVMETKEQADKAV 67
Query: 60 ESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHS-PYGRSPSPAY 110
E +++ +R + V A++ E+D + D P R PYGR P Y
Sbjct: 68 EGLNQTIFGNRKLKVSIAVRKAPEKDFKDDRPPFDSKPRPPRPYGRDSRPDY 119
>gi|302897832|ref|XP_003047724.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
gi|256728655|gb|EEU42011.1| hypothetical protein NECHADRAFT_72372 [Nectria haematococca mpVI
77-13-4]
Length = 333
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P T E ++ + FE YG+V H + R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHPKLT-EAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 131 AKEGLQGEQIEGRTLSIEKA 150
>gi|363735874|ref|XP_421917.3| PREDICTED: protein boule-like [Gallus gallus]
Length = 312
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALEST 62
+FV D +T E D+++ F YG V V+I + + F+ FETQE+A K L+
Sbjct: 72 IFVGGID-FKTNENDLRKFFAQYGCVREVKIVNDRAGISKGYGFITFETQEDAQKILQEA 130
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
+ D+ +++ A++ R R + + GG
Sbjct: 131 KKLNYKDKKLNIGPAIRKQQTRMPRSNVIQEGG 163
>gi|350404339|ref|XP_003487074.1| PREDICTED: hypothetical protein LOC100741180 [Bombus impatiens]
Length = 647
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDMTKVELEEHFSKYGTVVGSSINRGFGFVQFEEEQSAQKAIQNEDGAMFKG 75
Query: 70 RVISVEYALKDD 81
R I V A KD+
Sbjct: 76 RRIDVRPAKKDN 87
>gi|432888898|ref|XP_004075077.1| PREDICTED: RNA-binding protein 4.1-like [Oryzias latipes]
Length = 417
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
++ I ++++ FE +G VL I +N+AFV E E+A +A+ D + +++
Sbjct: 80 LHVGNIACTNQELRAKFEEFGAVLECDIVKNYAFVHMERMEDAMEAINKLDNTAFKGKLM 139
Query: 73 SVEYALK------DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY------GR 120
SV+ + +R Y + G + + P ++ P +Y GR
Sbjct: 140 SVKLSTSRLRTAPGMGDRSGCYRCGQEGHWSKECPLDQNGFQRNGSEPKSEYDASGFGGR 199
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
+S AY + G PD+G +P
Sbjct: 200 EQSMAYPDFGG-------EPDYGSSFAP 220
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P T E +++ F YG + I +NF FV +++ EA +A+ + + +L
Sbjct: 4 IFIGNLAPETTTE-ELRSLFSQYGKIAECSIVKNFGFVHMDSKAEAEEAIRNLHQYELNA 62
Query: 70 RVISVEYA 77
+ ++VE +
Sbjct: 63 QPMNVELS 70
>gi|326430719|gb|EGD76289.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 642
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALEST 62
L+V NF+ T E D+++ FE G+V+ V++ R+ F FV F T+EEA A+
Sbjct: 431 LYVKNFNENVTEE-DLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAKK 489
Query: 63 DRSKLVDRVISVEYAL 78
+R L DR I V + L
Sbjct: 490 NRQPLQDRPIYVAFHL 505
>gi|405966302|gb|EKC31602.1| Heterogeneous nuclear ribonucleoprotein C [Crassostrea gigas]
Length = 439
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 17/126 (13%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI-RRNFAFVQFETQEEATKALESTDRSKLV 68
+F+ N + + +++ FE YG +L + R F F+QF +EE +A+++ D L
Sbjct: 128 VFIGNLPFDKVTKEELENMFEKYGKILGISTHERGFGFIQFSKEEEGLEAVKNEDGGLLK 187
Query: 69 DRVISVEYALKDDSERDDRYDSPRRGGYG---RHSPYGRSPSP-AYRRRPSPDYGRGRSP 124
+ V+ AL+ RRGG R +P G SP P A R P P G P
Sbjct: 188 GHKLDVKMALEG-----------RRGGGKPPPRGNPRGASPGPYADRFVPPPGSRDGHPP 236
Query: 125 AY-DRY 129
A DRY
Sbjct: 237 ATEDRY 242
>gi|405974565|gb|EKC39200.1| RNA-binding protein 4 [Crassostrea gigas]
Length = 226
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 13/117 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
+ L++ N P R+ D+++ FE YG V+ I RN+ F+ FE EA A + D
Sbjct: 6 STKLYIGNL-PETCRKADLQKMFEAYGKVIECDIVRNYCFIHFENPNEAKMAQANLDGVD 64
Query: 67 LVDRVISVEYALKDDSE------RDDRYDSPRRGGYGRHSPYG------RSPSPAYR 111
+ VE + + + + Y + G + + P G R P P YR
Sbjct: 65 FEGVKLKVEMSHSKVRQKPGMGGKGECYRCGKEGHWSKDCPKGPSRGKPRGPEPPYR 121
>gi|367038789|ref|XP_003649775.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
gi|346997036|gb|AEO63439.1| hypothetical protein THITE_2108702 [Thielavia terrestris NRRL 8126]
Length = 325
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P R E +I R FE YG V +I R+ F FV+ T E+A
Sbjct: 69 PGSNLFVTGIHP-RIEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMMTSEQADA 127
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+E + R +++E A
Sbjct: 128 AMEGLRGEIIEGRTLNIEKA 147
>gi|224074996|ref|XP_002304510.1| predicted protein [Populus trichocarpa]
gi|222841942|gb|EEE79489.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R D++++F G VL + R FAFV ET E+A +
Sbjct: 46 PGNNLYVTGLS-TRVTSSDLEKYFSSEGKVLECHLVTDPRTRESRGFAFVTMETVEDANR 104
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ +RS L RVI+VE A
Sbjct: 105 CVKYLNRSVLEGRVITVEKA 124
>gi|62511030|sp|Q6IQ97.1|RBM41_DANRE RecName: Full=RNA-binding protein 4.1; AltName: Full=RNA-binding
motif protein 4.1
gi|47940417|gb|AAH71513.1| RNA binding motif protein 4.1 [Danio rerio]
gi|160774000|gb|AAI55176.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 1 MANQRPTKT--LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKA 58
M+ +P + L V N T + +++ FE YG V+ I +++AFV E E+A +A
Sbjct: 69 MSKGKPKTSTKLHVGNISSSCTNQ-ELRAKFEEYGPVVECDIVKDYAFVHMERVEDAMEA 127
Query: 59 LESTDRSKLVDRVISVEYALK------DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRR 112
+ D + +++SV+ + ER Y + G + + P ++ S YR
Sbjct: 128 ISGLDNTAFQGKLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPLDQNGS--YRE 185
Query: 113 RPSP--------DYGRGRSPAYDR-YNG-PVYDQRRSPDHGRHRS---PVPVYDR 154
PS D G R + R ++G P Y +P HG R VP Y R
Sbjct: 186 GPSSEGFGPVRFDSGGDRGRGFHRGFSGEPAYAGSFAPSHGFTRGAGYAVPGYGR 240
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P T E +I+ F YG + I +NF FV +++ EA +A+++ L
Sbjct: 4 IFVGNLSPNTTAE-EIRSLFSQYGKISECDIVKNFGFVHMDSKSEADEAIQNLHHYMLNG 62
Query: 70 RVISVE 75
++VE
Sbjct: 63 MAMNVE 68
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FA V FE +E
Sbjct: 117 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENRE 175
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRR 113
++ +A E + +L R I V+Y++ +P G Y YG PS + RRR
Sbjct: 176 DSKEAKERANGMELDGRRIRVDYSITKGPH------TPTPGIYMGRPTYGGGPSVS-RRR 228
Query: 114 PSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVY 152
S Y RG YD Y + R + R RSP P Y
Sbjct: 229 DS--YDRGYERGYDSY------EDRDYHNNRRRSPSPYY 259
>gi|383866009|ref|XP_003708464.1| PREDICTED: uncharacterized protein LOC100882315 [Megachile
rotundata]
Length = 646
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV + + +++ HF YG V+ I R F FVQFE ++ A KA+++ D +
Sbjct: 16 IFVGHLQTDDMTKHELEEHFSKYGTVVGSLINRGFGFVQFEEEQSAQKAIQNEDGAMFKG 75
Query: 70 RVISVEYALKDD 81
R I V A KD+
Sbjct: 76 RRIDVRPAKKDN 87
>gi|72160170|ref|XP_788983.1| PREDICTED: uncharacterized protein LOC584006 [Strongylocentrotus
purpuratus]
Length = 300
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +Q L+V + + T++ D++R F YG+++ + + RN FAFV+FET +A
Sbjct: 1 MKDQFLAGRLYVGSLNHSTTKD-DVEREFGKYGHLVDIWMARNPPGFAFVEFETAGQAEA 59
Query: 58 ALESTDRSKLVDRVISVEYALKDD--------------------SERDDRYDSPRRGGYG 97
AL+ + + I VE + + RYDS R G G
Sbjct: 60 ALKELNGRTFLGNRIMVEPSRAQNGRGGRGGGSGGGRGGGGGGGGGGGGRYDSRRDGDRG 119
Query: 98 RHSPYGRSPSPAYRRRPSPDYGR 120
R RSP YR P DYGR
Sbjct: 120 RTGGPPRSPRGQYRDYPPSDYGR 142
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 18/132 (13%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
TK +FV PI T E D K FE YG V+ +I R+ F FV FE++E
Sbjct: 112 TKKIFVGGLPPILT-EDDFKDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDDL 170
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY 118
L + + L + ++ A E + P G S YGR R RPS D
Sbjct: 171 LANGNMIDLAGSKVEIKKA-----EPKKSSNLPTSTGSDSRSAYGRD----CRDRPSGDD 221
Query: 119 GRGRSPAYDRYN 130
G + AY YN
Sbjct: 222 RGGLADAYSSYN 233
>gi|330842446|ref|XP_003293189.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
gi|325076506|gb|EGC30286.1| hypothetical protein DICPUDRAFT_41662 [Dictyostelium purpureum]
Length = 880
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEE 54
A +P+ + + N P + ++I++ F YG + VRI R F FV+F T+EE
Sbjct: 774 AKSKPSSKIIIKNL-PFESTTKEIRKLFAAYGEIQSVRIPKKPNGGHRGFGFVEFLTEEE 832
Query: 55 ATKALESTDRSKLVDRVISVEYALKD 80
A A+E+ S R + ++YA +D
Sbjct: 833 AKNAMEALGSSHFYGRHLVLQYAEQD 858
>gi|313236719|emb|CBY11975.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNV--LHVRIR------RNFAFVQFETQ 52
M+ + P +L+V D TR +IK F YGNV +H+ I R FA+++FE+
Sbjct: 49 MSTRGPNTSLYVRPIDG-STRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESI 107
Query: 53 EEATKALESTDRSKLVDRVISVEYALKD 80
E+A A + +R++L D+++ V++A D
Sbjct: 108 EDAEYAQKKLNRTRLGDKMLHVDFAQGD 135
>gi|157110209|ref|XP_001651001.1| arginine/serine-rich splicing factor [Aedes aegypti]
gi|108883952|gb|EAT48177.1| AAEL000769-PA [Aedes aegypti]
Length = 247
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75
P TRERD++R FE +G + + +RR +AFV+F+ +A A+ + +KL+ + I VE
Sbjct: 11 PHDTRERDLERFFEGFGRIREILLRRGYAFVEFDDYRDAEDAIYELNGAKLLGQRIVVE 69
>gi|448534987|ref|XP_003870881.1| Npl3 RNA-binding protein [Candida orthopsilosis Co 90-125]
gi|380355237|emb|CCG24753.1| Npl3 RNA-binding protein [Candida orthopsilosis]
Length = 282
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 4 QRPTKTLFVINFDPIRT--RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
Q PTK LFV PIR+ RE D+ HF V+ VR+ +AF+ F+ + +A +AL
Sbjct: 3 QAPTKQLFV---RPIRSDVREEDLIEHFSAAAPVVEVRLMEGYAFLTFDNESDAGEALSK 59
Query: 62 TDRSKLVDRVISVEYA 77
+ D + VE+A
Sbjct: 60 FAGTDFRDEQLQVEFA 75
>gi|66801305|ref|XP_629578.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60462955|gb|EAL61152.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 306
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
+Q TL V N +P RTRE D++ F G V+ I R F FV + + +
Sbjct: 65 VDQNNGNTLHVSNLNP-RTRESDLRDTFASIGKVIDCTILLDPNTKESRGFGFVTYSSGD 123
Query: 54 EATKALESTDRSKLVDRVISVE 75
EA A++ D +K+ I VE
Sbjct: 124 EAQDAIQRLDSTKIDGNTIRVE 145
>gi|168051480|ref|XP_001778182.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670395|gb|EDQ56964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 172
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R E+D++ HF G VL R+ R F FV E E+A +
Sbjct: 11 PGNNLYVTGLS-TRVNEKDLQEHFSREGKVLECRLVLDPRTRESRGFGFVTMEHLEDAER 69
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ +RS L R+I+VE A
Sbjct: 70 CIKYLNRSTLEGRMITVEKA 89
>gi|449455042|ref|XP_004145262.1| PREDICTED: uncharacterized protein LOC101211183 [Cucumis sativus]
gi|449470652|ref|XP_004153030.1| PREDICTED: uncharacterized protein LOC101208036 [Cucumis sativus]
gi|449474935|ref|XP_004154325.1| PREDICTED: uncharacterized protein LOC101221508 [Cucumis sativus]
Length = 367
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P TR R++++HF G VL V + R F F+ + +EA
Sbjct: 38 ENPGNNLYVTGLSPRITR-RELEKHFSAEGTVLDVHLVADPLTRESRGFGFITMSSNDEA 96
Query: 56 TKALESTDRSKLVDRVISVEYA 77
++ +RS L R+I+VE A
Sbjct: 97 ENCIKYLNRSVLEGRIITVEKA 118
>gi|147901982|ref|NP_001087983.1| RNA binding motif protein 4B [Xenopus laevis]
gi|52139141|gb|AAH82645.1| LOC494668 protein [Xenopus laevis]
Length = 336
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 65/159 (40%), Gaps = 17/159 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L V N T E +++ FE YG VL I +++AFV E EA A+++ D ++
Sbjct: 80 LHVSNLSSSCTSE-ELRAKFEEYGAVLECDIVKDYAFVHMEISAEALDAIKNLDNTEFKG 138
Query: 70 RVISVEYALK------DDSERDDRYDSPRRGGYGRHSPYGRSP-----SPAYRRRPSPD- 117
+ + V+ + ER Y + G + + P + P Y PD
Sbjct: 139 KRMHVQLSTSRLRVTPGMGERTRCYRCGKEGHWSKECPLDQMAKELEQEPGYPPESFPDP 198
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRR 156
YG RS AY Y QR D G S V Y R R
Sbjct: 199 YGPMRSAAYR----TAYAQRVFYDEGERFSIVDYYQRYR 233
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N P T+ ++K FE +G V I +N+ FV + ++ A +A+ + + KL +
Sbjct: 4 LFVGNLPPEATQP-ELKSLFEQFGRVTECDIIKNYGFVHMDDKKAADEAVRNLNHYKLHN 62
Query: 70 RVISVEYA 77
I+VE++
Sbjct: 63 VSINVEHS 70
>gi|113475531|ref|YP_721592.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110166579|gb|ABG51119.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
+++V N T E D+K F YGNV V++ R FAFV+ E+++E T A+E
Sbjct: 2 SVYVGNLSYDATDE-DLKTAFAKYGNVKRVQVPNDRETGRPRGFAFVEMESEDEETAAIE 60
Query: 61 STDRSKLVDRVISVEYA 77
D S+L+ R++ V A
Sbjct: 61 GLDGSELMGRILKVNKA 77
>gi|410910852|ref|XP_003968904.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Takifugu
rubripes]
Length = 238
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N +R D++R F YG ++ V I R FA++QFE +A
Sbjct: 8 PNTSLFVRNISD-ESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL S DR + R I +++A D
Sbjct: 67 ALHSLDRKWVCGRQIEIQFAQGD 89
>gi|348544591|ref|XP_003459764.1| PREDICTED: RNA-binding protein 4.1-like [Oreochromis niloticus]
Length = 419
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 72/184 (39%), Gaps = 34/184 (18%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
R + L V N I ++++ FE +G VL I +N+AFV E E+A +A+ D
Sbjct: 75 RGSTKLHVGN---IACTNQELRAKFEEFGTVLECDIVKNYAFVHMERMEDAMEAINQLDN 131
Query: 65 SKLVDRVISVEYA---LKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYG-R 120
+ +++SV+ + L+ DR R G G S + P G
Sbjct: 132 TAFKGKLMSVKLSTSRLRTAPGMGDRSGCYRCGQEGHWS----------KECPLDQNGYH 181
Query: 121 GRSPAYDRYNGPVY-----------DQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
G P D Y+ + D PD+G +PV + R G S N
Sbjct: 182 GSEPKSDGYDASRFGGRGRSRGYHPDFSGEPDYGGSYAPVHGFSR------GSGHSSNMA 235
Query: 170 RYRR 173
YRR
Sbjct: 236 GYRR 239
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P T + +++ F YG + I +NF FV + + EA +A+ + + +L
Sbjct: 4 IFIGNLSPDTTSD-ELRSLFSQYGKIAECSIVKNFGFVHMDDKTEAEEAIRNLHQYELNG 62
Query: 70 RVISVE 75
+ ++VE
Sbjct: 63 QPMNVE 68
>gi|402911185|ref|XP_003918220.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Papio
anubis]
Length = 719
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
M RP K LFV + ++T E+ +K F YG +++V + R FAFV FE+
Sbjct: 2 MEADRPEK-LFVGGLN-LKTDEKALKAEFVKYGRIINVLLMKDRETNKSRGFAFVTFESP 59
Query: 53 EEATKALESTDRSKLVDRVISVEYALK 79
+A A + L + I V A+K
Sbjct: 60 ADAEAAARDLNGKYLDGKAIKVAGAIK 86
>gi|255636876|gb|ACU18771.1| unknown [Glycine max]
Length = 246
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATKALE 60
TL+V R ERD++ HF G V RI R FAF+ +T E+A + ++
Sbjct: 70 TLYVTGLS-SRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTVEDANRCIK 128
Query: 61 STDRSKLVDRVISVE 75
++S L R I+VE
Sbjct: 129 YLNQSVLEGRYITVE 143
>gi|406994267|gb|EKE13283.1| hypothetical protein ACD_13C00045G0007 [uncultured bacterium]
Length = 134
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 54/123 (43%), Gaps = 14/123 (11%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKAL 59
K LFV P T + ++K F G V+ + + F FV+ ET EEA KA+
Sbjct: 3 KRLFVAGL-PFSTTQDELKTLFSESGTVVSATVIMDKMTGQSKGFGFVEMETTEEAAKAI 61
Query: 60 ESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS-PDY 118
S + ++ R + V A K ER DR D GG P G+ P RR +
Sbjct: 62 SSLNETEFGGRTLIVAEA-KPMEERRDRADF---GGRSYGGPRGQRPGFGKRREGGRGKF 117
Query: 119 GRG 121
GRG
Sbjct: 118 GRG 120
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALEST 62
+ + N D T E D+K F YGNV V + RN FAF+ F T+EEA KA+
Sbjct: 770 IHISNLDRTAT-EADLKEVFSKYGNVTRVNLPRNLVGKTKGFAFIDFATKEEAEKAVAEM 828
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSP 108
+ +K +++ E AL +S + R + R SP +PSP
Sbjct: 829 NNTKFKSQIL--EVALSKES-KIKRAATTVVADTARSSP---APSP 868
>gi|198438407|ref|XP_002126373.1| PREDICTED: similar to FUS interacting protein (serine-arginine
rich) 1 [Ciona intestinalis]
Length = 221
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 1 MANQRPTKTLFVINF-DPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFET 51
M+ RP +LFV N D IR D++R F +G V V I R FA++QFE
Sbjct: 1 MSRARPNASLFVRNIADNIRPD--DLRREFVRFGPVSDVYIPLDYYNRRPRGFAYIQFED 58
Query: 52 QEEATKALESTDRSKLVDRVISVEYALKD 80
+A AL + DR + R I V++A D
Sbjct: 59 TRDAEDALYAMDRKWICGRYIEVQFAAGD 87
>gi|170106173|ref|XP_001884298.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164640644|gb|EDR04908.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEEAT 56
P+ L V IRT+ERD+ F +G V V I R F F++ T E+AT
Sbjct: 6 PSNVLGVFGL-SIRTQERDLDEEFSRFGRVEKVTIVYDQRQSDRSRGFGFIKMATVEDAT 64
Query: 57 KALESTDRSKLVDRVISVEYALKD 80
+ ++ + L R I V+Y++ D
Sbjct: 65 RCIQELNGVDLNGRRIRVDYSVTD 88
>gi|336472231|gb|EGO60391.1| hypothetical protein NEUTE1DRAFT_107026 [Neurospora tetrasperma
FGSC 2508]
gi|350294548|gb|EGZ75633.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 131 AKEGLQGEVIEGRTLSIEMA 150
>gi|16944647|emb|CAC28728.2| conserved hypothetical protein [Neurospora crassa]
Length = 343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 131 AKEGLQGEVIEGRTLSIEMA 150
>gi|407264369|ref|XP_003945664.1| PREDICTED: periphilin-1-like [Mus musculus]
Length = 668
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
RR + H P RS Y R SP Y R RSP Y R P Y + RS + R RS P
Sbjct: 227 RRKTFSSHHPRDRSSH--YARDRSPHYARDRSPHYARDRPPQYARDRSSQYARDRS--PQ 282
Query: 152 YDRRRSPDYGRNRSPNFGRYR 172
Y R RSP Y R+RSP++ R R
Sbjct: 283 YARDRSPQYARDRSPHYARDR 303
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRRRPSPDYGR 120
DRS R S +YA +R +Y R Y R S Y R S Y R SP Y R
Sbjct: 310 DRSSQYARDRSSQYA----RDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRSPQYAR 365
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
RS Y R P Y + RSP + R RS P Y R RS Y R+RSP + R R
Sbjct: 366 DRSSHYARDRSPHYARDRSPHYARDRS--PHYARDRSSHYARDRSPQYARDR 415
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Query: 89 DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
D P + R S Y R SP Y R SP Y R RSP Y R P Y + RS + R RS
Sbjct: 262 DRPPQYARDRSSQYARDRSPQYARDRSPQYARDRSPHYARDRSPQYARDRSSQYARDRS- 320
Query: 149 VPVYDRRRSPDYGRNRSPNFGRYR 172
Y R RS Y R+RS + R R
Sbjct: 321 -SQYARDRSSQYARDRSSQYARDR 343
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 53/112 (47%), Gaps = 8/112 (7%)
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR--HSPYGRSPSPAYRRRPSPDYGR 120
DRS R S +YA +R +Y R Y R S Y R SP Y R SP Y R
Sbjct: 334 DRSSQYARDRSSQYA----RDRSSQYARDRSPQYARDRSSHYARDRSPHYARDRSPHYAR 389
Query: 121 GRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
RSP Y R Y + RSP + R RS Y R RS Y R+RS ++ R R
Sbjct: 390 DRSPHYARDRSSHYARDRSPQYARDRS--SQYARDRSSHYARDRSSHYARDR 439
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 102 YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYG 161
Y R SP Y R S Y R RS Y R Y + RS + R RS Y R RS Y
Sbjct: 299 YARDRSPQYARDRSSQYARDRSSQYARDRSSQYARDRSSQYARDRS--SQYARDRSSQYA 356
Query: 162 RNRSPNFGRYR 172
R+RSP + R R
Sbjct: 357 RDRSPQYARDR 367
>gi|197632059|gb|ACH70753.1| zgc:56141-like [Salmo salar]
gi|209155072|gb|ACI33768.1| RNA-binding protein 4B [Salmo salar]
Length = 347
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ K L V N + + + +++ FE YG V I +NFAFV + +EA A++
Sbjct: 74 NQGAVK-LHVTNVE--KGNDDELRTLFEEYGTVSECAIVKNFAFVHMDNSDEALDAIKGL 130
Query: 63 DRSKLVDRVISVEYA-LKDDSERDDRYDSPRRGGYG--------RHSPYGRSPSPAYRR 112
D + + I V+ + + E ++ Y P+RGGY RH P P P+Y R
Sbjct: 131 DNVEFQGKRIHVQISKSRPRYEEEEDYPPPQRGGYWPPRGYPGERHDP----PPPSYLR 185
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P + +I+ F YG V I +NFAFV + ++ ATKA+ S KL
Sbjct: 4 IFIGNV-PREADKDEIQALFSQYGAVTECAIVKNFAFVHMDDRKSATKAIRSLHLYKLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TAINVE 68
>gi|296815176|ref|XP_002847925.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238840950|gb|EEQ30612.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 903
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N R +RD+ F +G + + I++ + F+QF + KALE+ + L
Sbjct: 428 LFIGNLPTERVTKRDLFHIFHMHGKLAQISIKQAYGFIQFLEPDSCRKALEAQQGATLRG 487
Query: 70 RVISVEYALKDDSERDDRYDSPRRG--GYGRHSPYGRSPSPAYRRRPSPDYGRGRSP--- 124
R I +E + P+RG G P GR+ RR SP+Y R R P
Sbjct: 488 RKIHLEIS------------KPQRGPRNSGPTEPSGRN----QRRSRSPEYERNREPLRG 531
Query: 125 ---AYDRYN 130
A DRY+
Sbjct: 532 GRSAADRYD 540
>gi|356566197|ref|XP_003551321.1| PREDICTED: uncharacterized protein LOC100808038 [Glycine max]
Length = 364
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P R +R++++HF G V+ V + R F FV ET EEA
Sbjct: 46 ENPGNNLYVTGLSP-RITKRELEKHFAAEGKVIDVHLVVDPWTRESRGFGFVTMETLEEA 104
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS 115
+ ++ +RS L RVI+VE A + R R +P R G + R SP+Y R S
Sbjct: 105 ERCVKYLNRSVLEGRVITVEKAKR----RRGRTPTPGRY-LGLRTIRARRRSPSYSPRRS 159
Query: 116 PDYG--RGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRS 157
P Y R + + SPD+ R RS P + RRRS
Sbjct: 160 PSYSPFRRSYSRSPYSSDRSRSRSYSPDYQRRRSYSPYHSRRRS 203
>gi|1781299|emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
Length = 235
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ERD++ HF G V V RI R FAF+ ++ E+A +
Sbjct: 64 PGNTLYVTGLS-TRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLEDANR 122
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 123 CIKHLNQSVLEGRYITVE 140
>gi|401826505|ref|XP_003887346.1| hypothetical protein EHEL_051570 [Encephalitozoon hellem ATCC
50504]
gi|392998505|gb|AFM98365.1| hypothetical protein EHEL_051570 [Encephalitozoon hellem ATCC
50504]
Length = 299
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 74/162 (45%), Gaps = 25/162 (15%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVE 75
P E IK +F +G V V ++ + F+ F+++ T+ L RS +D ISVE
Sbjct: 9 PNHVSEEQIKEYFGQFGEVTDVSLKGTYGFLNFDSESSITRVL--NQRSHAIDGAPISVE 66
Query: 76 YALK----DDSERDDRYDSPRRGGYG-------RHSPY------GRSPSPAYRRRP-SPD 117
A DSE DRY RGGY R++PY RSP R P PD
Sbjct: 67 RANGRKRPLDSEYHDRYMDMGRGGYSPRDYRGFRNAPYPPMRYEDRSPG---RYDPRFPD 123
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPD 159
GRSP+Y R +G D +RS D + + P++ R D
Sbjct: 124 RYGGRSPSY-RGDGFRGDPQRSRDFCEYCNSCPIHGVREVID 164
>gi|313246638|emb|CBY35523.1| unnamed protein product [Oikopleura dioica]
Length = 348
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNV--LHVRIR------RNFAFVQFETQ 52
M+ + P +L+V D TR +IK F YGNV +H+ I R FA+++FE+
Sbjct: 49 MSTRGPNTSLYVRPIDG-STRPDEIKLLFNEYGNVRDVHIPIDFNTRQPRGFAYIEFESI 107
Query: 53 EEATKALESTDRSKLVDRVISVEYALKD 80
E+A A + +R++L D+++ V++A D
Sbjct: 108 EDAEYAQKKLNRTRLGDKMLHVDFAQGD 135
>gi|123455020|ref|XP_001315258.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897929|gb|EAY03035.1| hypothetical protein TVAG_143350 [Trichomonas vaginalis G3]
Length = 156
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKAL 59
TK + T E +K FE YGN+ VRI RN F FV+FE +E+A KA
Sbjct: 24 TKCTVYVGSLSWSTNEDGLKAVFEKYGNITSVRIPRNDRDQSKGFGFVEFENEEDAKKAC 83
Query: 60 ESTDRSKLVDRVISV 74
E D ++L R + V
Sbjct: 84 E-MDGTELEGRALKV 97
>gi|422295771|gb|EKU23070.1| arginine serine-rich splicing factor [Nannochloropsis gaditana
CCMP526]
Length = 1161
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKAL 59
N +P +++ V N P+ RE D+ F +G V+ V I N AF+ ET E+A +A+
Sbjct: 453 GNNKPCRSIRVHNL-PVGVRETDLSELFGAFGRVMIVVINTNSNIAFLSLETVEQAEQAM 511
Query: 60 ESTDRSKLVDRVISVEYALKDDSERDD 86
+ R + ++YAL++ ++D
Sbjct: 512 ARWHDQEWRGRHLFLDYALRETISKED 538
>gi|194018610|ref|NP_001123392.1| RNA binding motif protein 28 [Xenopus (Silurana) tropicalis]
gi|189442619|gb|AAI67360.1| rbm28 protein [Xenopus (Silurana) tropicalis]
Length = 828
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K +I + E D+K HF +G VL + I R FAFVQF+ EA+KAL+
Sbjct: 113 KARLIIRNLSFQCSEEDLKEHFSNFGYVLEINIPKKSDGKMRGFAFVQFKNMLEASKALK 172
Query: 61 STDRSKLVDRVISVEYALKDD 81
T+ + R ++V++A+ D
Sbjct: 173 GTNMKSIKGRTVAVDWAVAKD 193
>gi|410906769|ref|XP_003966864.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 379
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
+ T L V N T + ++ F+ +G V+ I +++AFV E E+A +A+E D
Sbjct: 75 KSTTKLHVSNLGEGVTSDV-LRARFQEFGPVVECDIVKDYAFVHMERMEDAMEAIEKMDN 133
Query: 65 SKLVDRVISVEYALK------DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY 118
+ +++SV+ + Y + G + + P GR+ R R
Sbjct: 134 TAFKGKLMSVQLSTSRLRTAPGMGSHTGCYVCGKHGHWSKDCPVGRNSGDGARSRSGRVP 193
Query: 119 GRGRSPAYDRYN 130
RG PAYDR N
Sbjct: 194 SRG-PPAYDRGN 204
>gi|390600853|gb|EIN10247.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 329
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 18 IRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD 69
IRT+ERD+ F +G V V I R F F++ T E+ATKA+E+ + L
Sbjct: 84 IRTQERDLDDEFSRFGQVEKVTIVYDQRSGRSRGFGFIKMATVEDATKAIENLNGVDLNG 143
Query: 70 RVISVEYALKD 80
R I V+Y++ +
Sbjct: 144 RRIRVDYSVTE 154
>gi|294460169|gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 73/166 (43%), Gaps = 36/166 (21%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R E D++ F G V+ RI R F FV +T E A +
Sbjct: 61 PGNNLYVTGLS-ARVVEADLEELFSQEGKVVDCRIVVDPRSRESRGFGFVTMDTLENADR 119
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY------GRHSPYGRSPSPAYR 111
++ +RS L R+I+VE A + R +P G Y R YGR + R
Sbjct: 120 CVKYLNRSTLEGRIITVEKAKR------KRARTPTPGSYLGVRATVRPRSYGRHRDGSSR 173
Query: 112 RRP--SP-------DYGRGRSPAYDRYNGPVY--DQRRSPDHGRHR 146
R P SP DY R RSP Y+GP Y ++ RSP++ +R
Sbjct: 174 RSPQYSPYRGSRERDYDRDRSP----YSGPSYRRERSRSPEYSPYR 215
>gi|410342937|gb|JAA40415.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ HF YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGL-SLYTTERDLREHFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 20 TRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
T ER ++ F P+G ++ VR+ R F FV + T +EA KA+E+ D L R
Sbjct: 48 TEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRT 107
Query: 72 ISVEYA 77
I V YA
Sbjct: 108 IRVNYA 113
>gi|389584444|dbj|GAB67176.1| poly(A)-binding protein [Plasmodium cynomolgi strain B]
Length = 384
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 19/130 (14%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATK 57
+P T+FV + P ++D+KRHF YGN+L I+ R + F+ FE Q+ A
Sbjct: 198 KPGCTIFVF-YLPNDWSDKDLKRHFSHYGNILGATIKRETNGKSRGYGFINFENQQSAIN 256
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSP------RRGGYGRHSPYGRSPSPAYR 111
A+ + ++ + V ++K E +Y +P R G SP P A
Sbjct: 257 AVAGMNGFNAGNKYLKV--SIKKGEE---QYLAPQYLNIDRMGNNSYGSPPPPPPPMACH 311
Query: 112 RRPSPDYGRG 121
SP++G G
Sbjct: 312 GNDSPNFGNG 321
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTD 63
+ ++FV NF P E DIK++F +G + +V I ++ +A++QF E KA+E +
Sbjct: 9 SNSIFVYNF-PSEWMENDIKKNFMIFGTINNVIIDKDINIYAYIQFHDGEACQKAMEVMN 67
Query: 64 RSKLVDRVISV 74
++ +V+ V
Sbjct: 68 GKEVSGKVLKV 78
>gi|348519627|ref|XP_003447331.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Oreochromis niloticus]
Length = 240
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N +R D++R F YG ++ V I R FA++QFE +A
Sbjct: 8 PNTSLFVRNISD-ESRPEDLRREFGRYGPIVDVYIPLDFYTRQPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL S DR + R I +++A D
Sbjct: 67 ALHSLDRKWVCGRQIEIQFAQGD 89
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKA 58
TKT ++ RT E ++ FE +G ++H+ + R FAF+++ET+EEA KA
Sbjct: 75 TKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKA 134
Query: 59 LESTDRSKLVDRVISVEYA 77
++ L RVI VE A
Sbjct: 135 IQGMHGKFLDGRVIFVEEA 153
>gi|395330687|gb|EJF63070.1| RNA-binding domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 272
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ L V IRT ERD+ F +G V V I R F F+ T EEAT+
Sbjct: 73 PSNVLGVFGLS-IRTTERDLDDEFSRFGRVEKVVIVYDQRSDRSRGFGFITMSTTEEATR 131
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
++ + +L R I V+Y++ D
Sbjct: 132 CIKELNGVELNGRRIRVDYSVTD 154
>gi|400603278|gb|EJP70876.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 812
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 51/185 (27%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + +RD+ F YG + + ++ + FVQ+ T EE +A+++ + ++
Sbjct: 358 LFIGNLSSDKVSKRDVFEIFHRYGRLAQISLKSAYGFVQYHTVEEGRRAVQNLEGVEIKG 417
Query: 70 RVISVEYALKDDSERDDRYDSP---------------------RRGGYGRHSPYGRSPSP 108
R I +E + D + +R SP RRGG HSP
Sbjct: 418 RRIHLEISKLQDKSKKERNRSPERGGRGRDGPRKGDKFHDRDDRRGGR-HHSP------- 469
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNF 168
RR S +GR D Y+G R HG R DR RSPDYGR+ +
Sbjct: 470 ---RRQS-YHGRD-----DSYSG------RDKTHGSGRG----RDRSRSPDYGRH---DK 507
Query: 169 GRYRR 173
GRYR+
Sbjct: 508 GRYRQ 512
>gi|449510738|ref|XP_004163746.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101230062 [Cucumis sativus]
Length = 369
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P L+V P TR R++++HF G VL V + R F F+ + +EA
Sbjct: 38 ENPGNNLYVTGLSPRITR-RELEKHFSAEGTVLDVHLVADPLTRESRGFGFITMSSNDEA 96
Query: 56 TKALESTDRSKLVDRVISVE 75
++ +RS L R+I+VE
Sbjct: 97 ENCIKYLNRSVLEGRIITVE 116
>gi|389627542|ref|XP_003711424.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
gi|351643756|gb|EHA51617.1| hypothetical protein MGG_07511 [Magnaporthe oryzae 70-15]
Length = 324
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V H R R F FV+ T ++A
Sbjct: 76 PGSNLFVTGIHP-RLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADA 134
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E +L R +S+E A
Sbjct: 135 AKEGLQGEELEGRTLSIEKA 154
>gi|299756715|ref|XP_002912240.1| hypothetical protein CC1G_13772 [Coprinopsis cinerea okayama7#130]
gi|298411800|gb|EFI28746.1| hypothetical protein CC1G_13772 [Coprinopsis cinerea okayama7#130]
Length = 241
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQE 53
Q P L V R RD++ F G V H R R F FV ET E
Sbjct: 79 GGQNPGNNLHVSGLS-HRVDSRDLETAFAKIGRVQKASVMYDPHTRESRGFGFVTMETTE 137
Query: 54 EATKALESTDRSKLVDRVISVEYA 77
EA A+ S + ++L+ ++I++E A
Sbjct: 138 EAEAAISSLNGTELMGKIITIEKA 161
>gi|242803744|ref|XP_002484236.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717581|gb|EED17002.1| transformer-SR ribonucleoprotein, putative [Talaromyces stipitatus
ATCC 10500]
Length = 329
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E DI R FE YG+V H + R F FV+ T E+A
Sbjct: 70 PGSNLFVTGIHP-RLTEADISRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTAEQADA 128
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + +S+E A
Sbjct: 129 AKEGLQGEVIDGLTLSIEKA 148
>gi|322708091|gb|EFY99668.1| RNA-binding protein (Nab3), putative [Metarhizium anisopliae ARSEF
23]
Length = 850
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N + +RD+ F YG + + ++ + FVQ+ T EE +A+E+ ++
Sbjct: 400 IFIGNLSSDKVSKRDVFELFHRYGRLAQISLKSAYGFVQYHTIEEGQRAMENLQGIEIKG 459
Query: 70 RVISVEYALKDDSERDDRYDSP 91
R I +E + D + DR SP
Sbjct: 460 RRIHLEISRVQDKSKKDRNRSP 481
>gi|342879144|gb|EGU80408.1| hypothetical protein FOXB_09084 [Fusarium oxysporum Fo5176]
Length = 345
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P + E ++ + FE YG+V H + R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-KLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 131 AKEGLQGEQIEGRTLSIEKA 150
>gi|303389449|ref|XP_003072957.1| putative arginine/serine rich pre-mRNA splicing factor
[Encephalitozoon intestinalis ATCC 50506]
gi|303302100|gb|ADM11597.1| putative arginine/serine rich pre-mRNA splicing factor
[Encephalitozoon intestinalis ATCC 50506]
Length = 301
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 74/164 (45%), Gaps = 27/164 (16%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVE 75
P E IK +F +G V + ++ + F+ F+++ T+ L RS +D + ISVE
Sbjct: 9 PSHVSEEQIKEYFGQFGEVTDLSLKGTYGFLNFDSESSITRVLNQ--RSHAIDGLPISVE 66
Query: 76 YALK----DDSERDDRYDSPRRGGYG--------RHSPY-------GRSPSPAYRRRP-S 115
A D E DRY RGGY R++PY GRSP R P
Sbjct: 67 RANGRKRPLDGEYHDRYMDMGRGGYSPHRDYRGFRNAPYPPSMRYDGRSPG---RYDPRF 123
Query: 116 PDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPD 159
PD GRSP Y R +G D +RS D + + P++ R D
Sbjct: 124 PDRYGGRSPEY-RGDGFRGDPQRSRDFCEYCNSCPIHGIRDVVD 166
>gi|388515619|gb|AFK45871.1| unknown [Medicago truncatula]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R +RD++ HF G V RI R FAFV ++ E+A +
Sbjct: 60 PGNTLYVTGLSS-RVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAER 118
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 119 CIKHLNQSVLEGRYITVE 136
>gi|357517877|ref|XP_003629227.1| ELAV-like protein [Medicago truncatula]
gi|355523249|gb|AET03703.1| ELAV-like protein [Medicago truncatula]
Length = 270
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R +RD++ HF G V RI R FAFV ++ E+A +
Sbjct: 60 PGNTLYVTGLSS-RVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDAER 118
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 119 CIKHLNQSVLEGRYITVE 136
>gi|402082552|gb|EJT77570.1| hypothetical protein GGTG_02676 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 318
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E+A
Sbjct: 69 PGSNLFVTGIHP-RLVEAEVTRMFEKYGEVEKCQIMRDPHTQESRGFGFVKMVTPEQADA 127
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+E + R +S+E A
Sbjct: 128 AIEGLQGEAIEGRTLSIEKA 147
>gi|354470659|ref|XP_003497562.1| PREDICTED: RNA-binding protein 28 isoform 3 [Cricetulus griseus]
Length = 761
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F PYG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKTAFTPYGTVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERD 85
++V++A+ D +D
Sbjct: 184 VAVDWAVAKDKYKD 197
>gi|354470657|ref|XP_003497561.1| PREDICTED: RNA-binding protein 28 isoform 2 [Cricetulus griseus]
Length = 746
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F PYG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKTAFTPYGTVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERD 85
++V++A+ D +D
Sbjct: 184 VAVDWAVAKDKYKD 197
>gi|351726252|ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycine max]
gi|255629542|gb|ACU15118.1| unknown [Glycine max]
Length = 238
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ERD++ HF G V RI R FAFV E+ E+A +
Sbjct: 69 PGDTLYVTGLSS-RVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAEDAER 127
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I++E
Sbjct: 128 CIKYLNQSVLEGRYITIE 145
>gi|212528134|ref|XP_002144224.1| RNA-binding protein (Nab3), putative [Talaromyces marneffei ATCC
18224]
gi|210073622|gb|EEA27709.1| RNA-binding protein (Nab3), putative [Talaromyces marneffei ATCC
18224]
Length = 862
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF E +AL++ S +
Sbjct: 369 LFVGNLPSERVTKRDLFHVFHKYGKLAQISIKQAYGFIQFLDSEPCHRALQAEQGSLIRG 428
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
R I +E + S R H GR P P +R SPDY RG
Sbjct: 429 RKIHLEISKPQKSTRPGP----------THPEPGRQPFP--KRSRSPDYSRG 468
>gi|85099136|ref|XP_960722.1| hypothetical protein NCU04164 [Neurospora crassa OR74A]
gi|28922241|gb|EAA31486.1| predicted protein [Neurospora crassa OR74A]
Length = 396
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMMTPEQANA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 131 AKEGLQGEVIEGRTLSIEMA 150
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T LF+ N E + R FE +G + VRI + F +V+FE E+A KA
Sbjct: 244 TGNLFIGNLS-WNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKA 302
Query: 59 LESTDRSKLVDRVISVEYAL 78
LE+ + ++L +R I +++++
Sbjct: 303 LEAKNGAELDNRAIRLDFSV 322
>gi|320168309|gb|EFW45208.1| RNA binding domain-containing protein [Capsaspora owczarzaki ATCC
30864]
Length = 1179
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 7/95 (7%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKA 58
P T ++ P +++ F P+G + VR+ R FAF++F T+EEA KA
Sbjct: 1060 PESTKLIVRNVPFEATRKELFDVFSPFGQLKSVRLPQKPGGQHRGFAFIEFLTKEEAKKA 1119
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYDSPRR 93
ES + R + +E+A +D S R + R
Sbjct: 1120 FESLKATHFYGRHLVLEWAAEDASVEQMREKTAAR 1154
>gi|291231293|ref|XP_002735599.1| PREDICTED: RNA binding motif protein 4B-like isoform 2
[Saccoglossus kowalevskii]
Length = 237
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N + RD++ FE YG VL + +N+ FV + ++EA +AL++ + + +
Sbjct: 11 VFVGNLS-KSVQSRDLRDLFEKYGKVLECDVIKNYGFVHMDKEDEAKEALDALNSKEFMG 69
Query: 70 RVISVEYA 77
I VE +
Sbjct: 70 TNIKVELS 77
>gi|300122234|emb|CBK22807.2| unnamed protein product [Blastocystis hominis]
Length = 187
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTDRSKLVDRVISVE 75
R + D+++ FE +G V +V I RN FAFV F T EEA KA+ + ++ D +SVE
Sbjct: 23 RLEKEDLRQAFEQFGTVTNVWIARNPPGFAFVTFSTPEEAEKAIREGNNMEIRDDRVSVE 82
Query: 76 YA 77
A
Sbjct: 83 LA 84
>gi|213513443|ref|NP_001133450.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
gi|209154048|gb|ACI33256.1| FUS-interacting serine-arginine-rich protein 1 [Salmo salar]
Length = 271
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N +R D++R F YG V+ V I R FA++QFE +A
Sbjct: 8 PNTSLFIRNISD-ESRPEDLRREFGRYGPVVDVYIPLDFYSRRPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWVCGRQIEIQFAQGD 89
>gi|90079587|dbj|BAE89473.1| unnamed protein product [Macaca fascicularis]
Length = 219
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|45201058|ref|NP_986628.1| AGL038Cp [Ashbya gossypii ATCC 10895]
gi|44985841|gb|AAS54452.1| AGL038Cp [Ashbya gossypii ATCC 10895]
gi|374109879|gb|AEY98784.1| FAGL038Cp [Ashbya gossypii FDAG1]
Length = 712
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALES 61
K++FV DP T+E+ +R F +G V V + + FAF+++ET+E ALE
Sbjct: 380 KSIFVSQLDPSVTKEKLTQR-FSKHGKVEDVNLIFKDNNTKVFAFIKYETEEATATALER 438
Query: 62 TDRSKLVDRVISVEY 76
+ + ++R + V+Y
Sbjct: 439 ENHASFLNRTMHVQY 453
>gi|162312534|ref|XP_001713104.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|1723533|sp|Q10422.1|YDC1_SCHPO RecName: Full=Uncharacterized RNA-binding protein C25G10.01
gi|159884012|emb|CAB16378.2| RNA-binding protein [Schizosaccharomyces pombe]
Length = 297
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKALES 61
LFV R +E ++++ F +G V HVRI R F F+ F T EEAT A+++
Sbjct: 103 LFVSGI-ASRMQEDELQQIFSKFGTVTHVRIMREPVTKASRGFGFLSFSTVEEATSAIDN 161
Query: 62 TDRSKLVDRVISVEYA 77
+ + RV++V+ A
Sbjct: 162 LNSQEFYGRVLNVQKA 177
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
+ LFV +T + +K F+ YGNV+ RI R F FV + + EEA+
Sbjct: 38 SSSKLFVGGI-SFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASS 96
Query: 58 ALESTDRSKLVDRVISVEYALK 79
A+++ D L R + V YA +
Sbjct: 97 AIQALDGQDLHGRRVRVNYATE 118
>gi|410906707|ref|XP_003966833.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P + +IK F YG V I +N+AFV + ++ ATKA++S KL
Sbjct: 4 IFVGNL-PREANQEEIKALFTEYGTVTECAIIKNYAFVHMDDRKAATKAIKSLHLHKLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TAINVE 68
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L V N + + + +++ FE YG+V + +NFAFV +EA A++ D ++
Sbjct: 80 LHVANVE--KGADDELRALFEEYGSVTECAVVKNFAFVHMSNSDEAMDAIKGLDNTEFQG 137
Query: 70 RVISVEYA 77
+ I V+ +
Sbjct: 138 KRIHVQIS 145
>gi|320581018|gb|EFW95240.1| hypothetical protein HPODL_3612 [Ogataea parapolymorpha DL-1]
Length = 737
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + D+ R F PYG V V +++ F FVQ+ EE ++A+E L +
Sbjct: 292 LFIGNLAVNTLSKEDVYRIFHPYGEVKQVNLKQGFGFVQYAKAEECSRAIEGEKNVPLHN 351
Query: 70 RVISVEYA 77
R + ++ +
Sbjct: 352 RFMHLQVS 359
>gi|41054387|ref|NP_955999.1| RNA-binding protein 4.1 [Danio rerio]
gi|28277979|gb|AAH46057.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 21/151 (13%)
Query: 23 RDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK--- 79
++++ FE YG V+ I +++AFV E E+A +A+ D + +++SV+ +
Sbjct: 92 QELRAKFEEYGPVVECDIVKDYAFVHMERVEDAMEAISGLDNTAFQGKLMSVKLSTSRLR 151
Query: 80 ---DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSP--------DYGRGRSPAYDR 128
ER Y + G + + P ++ S YR PS D G R + R
Sbjct: 152 TAPGMGERTGCYRCGQEGHWSKECPLDQNGS--YREGPSSEGFGPVRFDSGGDRGRGFHR 209
Query: 129 -YNG-PVYDQRRSPDHGRHRS---PVPVYDR 154
++G P Y +P HG R VP Y R
Sbjct: 210 GFSGEPAYAGSFAPSHGFTRGAGYAVPGYGR 240
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P T E +I+ F YG + I +NF FV +++ EA +A+++ L
Sbjct: 4 IFVGNLSPNTTAE-EIRSLFSQYGKISECDIVKNFGFVHMDSKSEADEAIQNLHHYMLNG 62
Query: 70 RVISVE 75
++VE
Sbjct: 63 MAMNVE 68
>gi|302690366|ref|XP_003034862.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
gi|300108558|gb|EFI99959.1| hypothetical protein SCHCODRAFT_84382 [Schizophyllum commune H4-8]
Length = 292
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P T D+K+ F YG V+ R+ F F+++E+ ++A A+ + I+VE+
Sbjct: 17 PPDTAPEDVKKTFGAYGTVVDCRVMTGFGFIEYESSKDAEDAVNEMNGKTFNGNSIAVEF 76
Query: 77 ALK-----DDSERDDRYDSPRR--GGY 96
A + + ERD Y +PRR GG+
Sbjct: 77 ARENRPRREPYERDREYGAPRRRPGGF 103
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALE 60
+ L+V N P + E+++K FE YG V ++I + F FV+++ EEA +A
Sbjct: 191 RRLYVTNI-PYTSTEQELKTVFEKYGTVSSIKIPKQRGGSLSGFCFVEYQLPEEAIRAFS 249
Query: 61 STDRSKLVDRVISVEYALKDDSE 83
D ++ R+ V A KDD E
Sbjct: 250 ELDNKIVLGRIFHVRPAFKDDKE 272
>gi|343427687|emb|CBQ71214.1| related to Transformer-2 protein homolog [Sporisorium reilianum
SRZ2]
Length = 341
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQE 53
+ P L V T +RD++ F YG + H R R FAFV FE E
Sbjct: 67 GDSNPGNNLHVSGLS-KGTTDRDLEEAFGKYGPIQKAQVMYDPHSREPRGFAFVTFEKAE 125
Query: 54 EATKALESTDRSKLVDRVISVEYA 77
+A A+ + + ++ + R I+VE A
Sbjct: 126 DAEAAITAMNNTEFLGRKITVEKA 149
>gi|209155162|gb|ACI33813.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 316
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV +P RE+D++R F+ YG + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 IFVGRLNP-SAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|58331865|ref|NP_001011096.1| serine/arginine-rich splicing factor 10 [Xenopus (Silurana)
tropicalis]
gi|54038246|gb|AAH84490.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 258
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 6 PTKTLFVINF-DPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEAT 56
P +LFV N D IR+ D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNIADDIRSE--DLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAE 65
Query: 57 KALESTDRSKLVDRVISVEYALKD 80
AL + D+ + R I +++A D
Sbjct: 66 DALHNLDKKWICGRQIEIQFAQGD 89
>gi|89272025|emb|CAJ83230.1| FUS interacting protein (serine/arginine-rich) 1 [Xenopus
(Silurana) tropicalis]
Length = 257
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 6 PTKTLFVINF-DPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEAT 56
P +LFV N D IR+ D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNIADDIRSE--DLRREFGRYGPIVDVYVPLDYYTRRPRGFAYVQFEDVRDAE 65
Query: 57 KALESTDRSKLVDRVISVEYALKD 80
AL + D+ + R I +++A D
Sbjct: 66 DALHNLDKKWICGRQIEIQFAQGD 89
>gi|384488552|gb|EIE80732.1| hypothetical protein RO3G_05437 [Rhizopus delemar RA 99-880]
Length = 238
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEE 54
N P LF+ IRT D++ F YG V+ H R R F F++ E+
Sbjct: 56 NTNPGDNLFITGLT-IRTNGADLEDIFGKYGKVIKAEIMYDPHTRESRGFGFIRMANAED 114
Query: 55 ATKALESTDRSKLVDRVISVEYA 77
A +AL +++ RV++VE A
Sbjct: 115 AERALNGVSGTEIDGRVVTVEKA 137
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKAL 59
KT ++ RT E ++ FE +GN++H+ + + FAF+++ET+EEA KA+
Sbjct: 76 KTKLYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAI 135
Query: 60 ESTDRSKLVDRVISVEYA 77
+ L RVI VE A
Sbjct: 136 QGMHGKFLDGRVIFVEEA 153
>gi|359318927|ref|XP_003638945.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 262
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|344250874|gb|EGW06978.1| Pre-mRNA-splicing factor RBM22 [Cricetulus griseus]
Length = 241
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 28/156 (17%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNV--LHVRIRRNFAFVQFETQEEATKALESTDRSK 66
TL+V T E D++ HF +G + + V R+ AF+QF T++ A A E +
Sbjct: 98 TLYVGGLGDTIT-ETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKL 156
Query: 67 LVD-RVISVEY-----ALKDDSERDDRYDSPRR--------GGYGRHSPYGRSPSPAYRR 112
+V+ R ++V++ A + E+D DS + GG+G H + P P + R
Sbjct: 157 IVNGRRLNVKWGRSQAARGKEKEKDGTTDSGIKLEPVPGLPGGFGPHMFHPMGPPPPFMR 216
Query: 113 RPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
P P + + P QR G+H SP
Sbjct: 217 APGPIHYPSQDP-----------QRMGAHAGKHSSP 241
>gi|367025775|ref|XP_003662172.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
gi|347009440|gb|AEO56927.1| hypothetical protein MYCTH_2314855 [Myceliophthora thermophila ATCC
42464]
Length = 324
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P R E +I R FE YG V +I R+ F FV+ T E+A
Sbjct: 68 PGSNLFVTGIHP-RLEESEITRLFEKYGEVEKCQIMRDPHSGESRGFGFVKMVTSEQADA 126
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+E + R +++E A
Sbjct: 127 AMEGLRGEVIEGRTLNIEKA 146
>gi|229485954|sp|P0C8Z4.1|RMXL3_PANTR RecName: Full=RNA-binding motif protein, X-linked-like-3
Length = 992
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
M RP K LFV + ++T E+ +K F YG+++ V + R FAFV FE+
Sbjct: 2 MEADRPEK-LFVGGLN-LKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESP 59
Query: 53 EEATKALESTDRSKLVDRVISVEYALK 79
+A A + L + I V +K
Sbjct: 60 ADAKAAARDMNGKYLDGKAIMVAQTIK 86
>gi|452822795|gb|EME29811.1| splicing factor, arginine/serine-rich 2 [Galdieria sulphuraria]
Length = 211
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ I RN FAFV+F +E+A KA
Sbjct: 26 TYSLLVLNI-SFRTTPNDLTPLFDKYGEVVDCYIPRNRRNGHSRGFAFVRFRKEEDARKA 84
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D ++ R I+V++A
Sbjct: 85 MEEMDGREVDGRSITVQFA 103
>gi|302404614|ref|XP_003000144.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261360801|gb|EEY23229.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 345
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V H + R F FV+ T ++A
Sbjct: 75 PGSNLFVTGIHP-RLSESEVTRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSDQADA 133
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 134 AKEGLQGEQIDGRTLSIEKA 153
>gi|354470655|ref|XP_003497560.1| PREDICTED: RNA-binding protein 28 isoform 1 [Cricetulus griseus]
Length = 707
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F PYG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKTAFTPYGTVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDSPRRG 94
++V++A+ D +D + S G
Sbjct: 184 VAVDWAVAKDKYKDTQPASAPDG 206
>gi|347834979|emb|CCD49551.1| hypothetical protein [Botryotinia fuckeliana]
Length = 308
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG+V H R R F FV+ T ++A
Sbjct: 77 PGSNLFVTGIHP-RLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADA 135
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 136 AKEGLQGEVIEGRTLSIEKA 155
>gi|238482369|ref|XP_002372423.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|317139223|ref|XP_003189145.1| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|317139225|ref|XP_001817354.2| transformer-SR ribonucleoprotein [Aspergillus oryzae RIB40]
gi|220700473|gb|EED56811.1| transformer-SR ribonucleoprotein, putative [Aspergillus flavus
NRRL3357]
gi|391864654|gb|EIT73949.1| hypothetical protein Ao3042_10100 [Aspergillus oryzae 3.042]
Length = 308
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV+ T E+A A E
Sbjct: 69 NLFVTGIHP-RLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|74204113|dbj|BAE29044.1| unnamed protein product [Mus musculus]
gi|74211878|dbj|BAE29284.1| unnamed protein product [Mus musculus]
Length = 183
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|296476640|tpg|DAA18755.1| TPA: FUS interacting protein (serine-arginine rich) 1-like [Bos
taurus]
Length = 262
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKCICGRQIEIQFAQGD 89
>gi|16905517|ref|NP_473357.1| serine/arginine-rich splicing factor 10 isoform 2 [Homo sapiens]
gi|122937372|ref|NP_001073856.1| serine/arginine-rich splicing factor 10 isoform 2 [Mus musculus]
gi|332807987|ref|XP_003307925.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|344287388|ref|XP_003415435.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 1
[Loxodonta africana]
gi|397140010|ref|XP_003846472.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|397478979|ref|XP_003810811.1| PREDICTED: serine/arginine-rich splicing factor 10 [Pan paniscus]
gi|403287348|ref|XP_003934911.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|403287350|ref|XP_003934912.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|441676930|ref|XP_004092715.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|47605579|sp|O75494.1|SRS10_HUMAN RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=40 kDa SR-repressor protein; Short=SRrp40;
AltName: Full=FUS-interacting serine-arginine-rich
protein 1; AltName: Full=Splicing factor SRp38;
AltName: Full=Splicing factor, arginine/serine-rich
13A; AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated
serine-arginine protein; Short=TLS-associated SR
protein
gi|47605750|sp|Q9R0U0.2|SRS10_MOUSE RecName: Full=Serine/arginine-rich splicing factor 10; AltName:
Full=FUS-interacting serine-arginine-rich protein 1;
AltName: Full=Neural-salient serine/arginine-rich
protein; AltName: Full=Neural-specific SR protein;
AltName: Full=Splicing factor, arginine/serine-rich
13A; AltName: Full=TLS-associated protein with Ser-Arg
repeats; Short=TASR; Short=TLS-associated protein with
SR repeats; AltName: Full=TLS-associated
serine-arginine protein; Short=TLS-associated SR
protein
gi|18034489|gb|AAL57514.1|AF449427_1 SRrp40 [Homo sapiens]
gi|3327957|gb|AAC26715.1| TLS-associated protein TASR-2 [Mus musculus]
gi|3327976|gb|AAC26727.1| TLS-associated protein TASR-2 [Homo sapiens]
gi|12852132|dbj|BAB29286.1| unnamed protein product [Mus musculus]
gi|13477159|gb|AAH05039.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787483|gb|AAL06099.1| TLS-associated SR protein 2 [Homo sapiens]
gi|25006522|gb|AAN65380.1| splicing factor SRp38 [Homo sapiens]
gi|29144881|gb|AAH43060.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|52789308|gb|AAH83082.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
gi|74214326|dbj|BAE40403.1| unnamed protein product [Mus musculus]
gi|74214388|dbj|BAE40431.1| unnamed protein product [Mus musculus]
gi|410223010|gb|JAA08724.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261892|gb|JAA18912.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261896|gb|JAA18914.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261898|gb|JAA18915.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302464|gb|JAA29832.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302466|gb|JAA29833.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302468|gb|JAA29834.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330569|gb|JAA34231.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330573|gb|JAA34233.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417398022|gb|JAA46044.1| Putative serine/arginine-rich splicing factor 10 [Desmodus
rotundus]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|346979687|gb|EGY23139.1| RNA-binding protein [Verticillium dahliae VdLs.17]
Length = 344
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V H + R F FV+ T ++A
Sbjct: 75 PGSNLFVTGIHP-RLSESEVTRLFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSDQADA 133
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 134 AKEGLQGEQIDGRTLSIEKA 153
>gi|346986281|ref|NP_001231298.1| serine/arginine-rich splicing factor 10 isoform 1 [Sus scrofa]
gi|338784425|gb|AEI98875.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|358369534|dbj|GAA86148.1| transformer-SR ribonucleoprotein [Aspergillus kawachii IFO 4308]
Length = 314
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV+ T E+A A E
Sbjct: 68 NLFVTGIHP-RLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 127 GLQGEVIEGRTLSIEKA 143
>gi|301754964|ref|XP_002913325.1| PREDICTED: splicing factor, arginine/serine-rich 13A-like
[Ailuropoda melanoleuca]
gi|359318923|ref|XP_003638943.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 183
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|154312862|ref|XP_001555758.1| hypothetical protein BC1G_05132 [Botryotinia fuckeliana B05.10]
Length = 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG+V H R R F FV+ T ++A
Sbjct: 77 PGSNLFVTGIHP-RLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADA 135
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 136 AKEGLQGEVIEGRTLSIEKA 155
>gi|74179690|dbj|BAE22485.1| unnamed protein product [Mus musculus]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|300360547|ref|NP_001177934.1| serine/arginine-rich splicing factor 10 isoform 3 [Homo sapiens]
gi|307133714|ref|NP_001182513.1| splicing factor, arginine/serine-rich 13A [Macaca mulatta]
gi|16265859|gb|AAL16666.1|AF419332_1 TLS-associated protein TASR-2 [Homo sapiens]
gi|193786066|dbj|BAG50956.1| unnamed protein product [Homo sapiens]
Length = 261
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|355557671|gb|EHH14451.1| hypothetical protein EGK_00378 [Macaca mulatta]
gi|355745027|gb|EHH49652.1| hypothetical protein EGM_00350 [Macaca fascicularis]
Length = 261
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|156052172|ref|XP_001592047.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980]
gi|154705271|gb|EDO05010.1| hypothetical protein SS1G_07495 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 313
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG+V H R R F FV+ T ++A
Sbjct: 77 PGSNLFVTGIHP-RLLEEEVSRLFEKYGDVEKCQIMRDPHTRESRGFGFVKMITSDQADA 135
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 136 AKEGLQGEVIEGRTLSIEKA 155
>gi|392868156|gb|EJB11446.1| transformer-SR ribonucleoprotein, variant [Coccidioides immitis RS]
Length = 288
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV T ++A A E
Sbjct: 67 NLFVTGIHP-RLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 126 GLQGESIEGRTLSIEKA 142
>gi|359496147|ref|XP_003635162.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Vitis vinifera]
Length = 228
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ER ++ HF G V RI R FAFV ET E+A +
Sbjct: 57 PGNTLYVTGLS-TRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDANR 115
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 116 CIKHLNQSVLEGRYITVE 133
>gi|313213456|emb|CBY37263.1| unnamed protein product [Oikopleura dioica]
Length = 737
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 10/127 (7%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-----NFAFVQFETQEEATKALES 61
++TLF+ N + + T E D+KR F YG +L + +++ +AFVQF ++A A+
Sbjct: 137 SRTLFIGNLEKVTTYE-DLKRQFFKYGKILKIDLKKINGVTRYAFVQFAKLDDARLAVHR 195
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
R KL ++ YA S+ S G+ YG S + RR +G
Sbjct: 196 MQREKLGKNIVCTCYARSIKSQVLWFSGSLPYRGHEIDPEYGES----FFRRVFEQFGTV 251
Query: 122 RSPAYDR 128
RS DR
Sbjct: 252 RSLILDR 258
>gi|62897549|dbj|BAD96714.1| FUS interacting protein (serine-arginine rich) 1 isoform 2
variant [Homo sapiens]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|302803285|ref|XP_002983396.1| hypothetical protein SELMODRAFT_445508 [Selaginella moellendorffii]
gi|300149081|gb|EFJ15738.1| hypothetical protein SELMODRAFT_445508 [Selaginella moellendorffii]
Length = 839
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDI-KRHFEPYGNVLHVRIRRNF---AFVQFETQEEATKA 58
++ +TL+V P T + DI K HF+ +G VL +RI + AFVQF +E A A
Sbjct: 505 TEKAQRTLYVRCI-PTDTNKADILKGHFQKFGKVLDIRIPTMWKDRAFVQFYERESALAA 563
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYD----SPRRGGYGRHSPYGRSPSPAYRRRP 114
L S + + L +R I +++A +D+ YD P G+ P G + +P P
Sbjct: 564 LASPE-AVLGNRFIQLDWANRDNRVHPHPYDYHRSKPGAPAAGKEVPNGTTATPGT---P 619
Query: 115 SPD 117
+P+
Sbjct: 620 APE 622
>gi|440468942|gb|ELQ38069.1| hypothetical protein OOU_Y34scaffold00552g23 [Magnaporthe oryzae
Y34]
gi|440480554|gb|ELQ61213.1| hypothetical protein OOW_P131scaffold01198g45 [Magnaporthe oryzae
P131]
Length = 415
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V H R R F FV+ T ++A
Sbjct: 82 PGSNLFVTGIHP-RLTEAEVTRMFEKYGEVEKCQIMRDPHTRESRGFGFVKMVTSDQADA 140
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E +L R +S+E A
Sbjct: 141 AKEGLQGEELEGRTLSIEKA 160
>gi|4001720|dbj|BAA35092.1| neural specific sr protein NSSR 1 [Mus musculus]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|119189299|ref|XP_001245256.1| hypothetical protein CIMG_04697 [Coccidioides immitis RS]
gi|392868155|gb|EJB11445.1| transformer-SR ribonucleoprotein [Coccidioides immitis RS]
Length = 271
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV T ++A A E
Sbjct: 67 NLFVTGIHP-RLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 126 GLQGESIEGRTLSIEKA 142
>gi|302843097|ref|XP_002953091.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
gi|300261802|gb|EFJ46013.1| hypothetical protein VOLCADRAFT_63158 [Volvox carteri f.
nagariensis]
Length = 762
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 22 ERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74
++DI+ F P+G++ R+ R FAFV+F T++EA ALE + L R + V
Sbjct: 665 KKDIQGLFNPFGHLKSCRLPKKFDGSHRGFAFVEFVTKQEAKNALEGLAGTHLYGRRLVV 724
Query: 75 EYALKDDSERDDR 87
EYA +DD+ D R
Sbjct: 725 EYAREDDTLDDIR 737
>gi|5730079|ref|NP_006616.1| serine/arginine-rich splicing factor 10 isoform 1 [Homo sapiens]
gi|6753820|ref|NP_034308.1| serine/arginine-rich splicing factor 10 isoform 1 [Mus musculus]
gi|346986279|ref|NP_001231297.1| serine/arginine-rich splicing factor 10 isoform 2 [Sus scrofa]
gi|114554649|ref|XP_001166460.1| PREDICTED: uncharacterized protein LOC456627 isoform 3 [Pan
troglodytes]
gi|332266729|ref|XP_003282350.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|344287394|ref|XP_003415438.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 4
[Loxodonta africana]
gi|403287342|ref|XP_003934908.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410032453|ref|XP_003949372.1| PREDICTED: uncharacterized protein LOC456627 [Pan troglodytes]
gi|426328337|ref|XP_004024959.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|441676940|ref|XP_004092716.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|16265857|gb|AAL16665.1|AF419331_1 TLS-associated protein TASR-1 [Homo sapiens]
gi|2961107|gb|AAC70916.1| TLS-associated protein with SR repeats [Mus musculus]
gi|2961149|gb|AAC70918.1| TLS-associated protein TASR [Homo sapiens]
gi|7022446|dbj|BAA91601.1| unnamed protein product [Homo sapiens]
gi|12654547|gb|AAH01107.1| FUS interacting protein (serine/arginine-rich) 1 [Homo sapiens]
gi|15787482|gb|AAL06098.1| TLS-associated SR protein 1 [Homo sapiens]
gi|25006524|gb|AAN65381.1| splicing factor SRp38-2 [Homo sapiens]
gi|74178032|dbj|BAE29809.1| unnamed protein product [Mus musculus]
gi|74195900|dbj|BAE30509.1| unnamed protein product [Mus musculus]
gi|74214411|dbj|BAE40441.1| unnamed protein product [Mus musculus]
gi|261861046|dbj|BAI47045.1| splicing factor, arginine/serine-rich 13A [synthetic construct]
gi|312153330|gb|ADQ33177.1| FUS interacting protein (serine/arginine-rich) 1 [synthetic
construct]
gi|410223008|gb|JAA08723.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410261894|gb|JAA18913.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410302462|gb|JAA29831.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|410330571|gb|JAA34232.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
gi|417396659|gb|JAA45363.1| Putative serine/arginine-rich splicing factor [Desmodus rotundus]
Length = 183
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|167387718|ref|XP_001738276.1| arginine/serine-rich splicing factor [Entamoeba dispar SAW760]
gi|165898565|gb|EDR25398.1| arginine/serine-rich splicing factor, putative [Entamoeba dispar
SAW760]
Length = 202
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV- 68
LF+ F P RE D++ F Y + + I+ F FV ET+E+A K +E + + +
Sbjct: 7 LFLGRF-PSEMRESDVQEMFSKYTKIERIDIKTGFCFVVCETEEDAKKIIELSQTTPFMF 65
Query: 69 -DRVISVEYALKDDSERDDRYDSPRRGGYGRHSP 101
D+ I++E + +++S ++ Y ++G R+ P
Sbjct: 66 HDKKINIELSRQNNSSKEC-YVCHQQGHIARNCP 98
>gi|145237470|ref|XP_001391382.1| transformer-SR ribonucleoprotein [Aspergillus niger CBS 513.88]
gi|134075854|emb|CAL00233.1| unnamed protein product [Aspergillus niger]
gi|350635498|gb|EHA23859.1| hypothetical protein ASPNIDRAFT_200274 [Aspergillus niger ATCC
1015]
Length = 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV+ T E+A A E
Sbjct: 68 NLFVTGIHP-RLTESDISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 126
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 127 GLQGEVIEGRTLSIEKA 143
>gi|126328572|ref|XP_001362618.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Monodelphis domestica]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|348525775|ref|XP_003450397.1| PREDICTED: RNA-binding protein 4B-like [Oreochromis niloticus]
Length = 338
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N P T E +IK F YG V I +NFAFV + ++ ATKA+++ KL
Sbjct: 4 IFVGNL-PRATNEDEIKALFTEYGTVTECAIIKNFAFVHMDDRKAATKAIKNLHLYKLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TPINVE 68
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ K L V N + + + +++ FE YG V + +NFAFV +EA A++
Sbjct: 74 NQGSVK-LHVANVE--KGSDDELRALFEEYGTVTECAVVKNFAFVHMSNSDEAMDAIKGL 130
Query: 63 DRSKLVDRVISVE 75
D ++ + I V+
Sbjct: 131 DNTEFQGKRIHVQ 143
>gi|303323191|ref|XP_003071587.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111289|gb|EER29442.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320033282|gb|EFW15230.1| transformer-SR ribonucleoprotein [Coccidioides posadasii str.
Silveira]
Length = 271
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV T ++A A E
Sbjct: 67 NLFVTGIHP-RLTEADVSRLFEKYGDVQNCSIMLDPHTKESRGFGFVNMATSDQAEAAKE 125
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 126 GLQGESIEGRTLSIEKA 142
>gi|332226186|ref|XP_003262269.1| PREDICTED: RNA-binding motif protein, X-linked-like-3 [Nomascus
leucogenys]
Length = 1033
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
M RP K LF+ ++T E+ +K F YG ++ V + R FAF+ FE+
Sbjct: 2 MEADRPEK-LFIGGLS-LKTDEKALKAEFGKYGRIIEVFLMKDRETNKSRGFAFIIFESP 59
Query: 53 EEATKALESTDRSKLVDRVISVEYALK 79
+A A + L + I V A+K
Sbjct: 60 ADANAAARDMNGKYLDGKAIKVALAIK 86
>gi|118151320|ref|NP_001071594.1| splicing factor, arginine/serine-rich 13A [Bos taurus]
gi|73586753|gb|AAI03101.1| FUS interacting protein (serine/arginine-rich) 1 [Bos taurus]
gi|296490040|tpg|DAA32153.1| TPA: FUS interacting protein (serine/arginine-rich) 1 [Bos
taurus]
Length = 182
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|383127582|gb|AFG44445.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
Length = 90
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 48/87 (55%), Gaps = 16/87 (18%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRP---SPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
RRG YG RS SP Y RR SPDYGR SP Y R + +R SPD+GR S
Sbjct: 4 RRGSYGSRD---RSASPLYSRRALRDSPDYGRAPSPIYAR-----HPERSSPDYGRAAS- 54
Query: 149 VPVYDR---RRSPDYGRNRSPNFGRYR 172
P+Y R R SPDYGR SP RYR
Sbjct: 55 -PIYARRPQRDSPDYGRVVSPVHERYR 80
>gi|301105355|ref|XP_002901761.1| ras GTPase-activating protein-binding protein, putative
[Phytophthora infestans T30-4]
gi|262099099|gb|EEY57151.1| ras GTPase-activating protein-binding protein, putative
[Phytophthora infestans T30-4]
Length = 488
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
+LF+ + P +T E D++ F+ YG++ V + +R FAFV + QE AL T K
Sbjct: 352 SLFIRDV-PAQTSENDLRELFKSYGSIAGVSVVAQRGFAFVDYYEQESMRAALAETKELK 410
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
+ D+V+ V+ ER +R D +RG + + GR R P GRG
Sbjct: 411 VFDKVLQVD-------ERAERKDG-QRGSFRSNDTRGRG------RGHGPKSGRG 451
>gi|197097312|ref|NP_001125358.1| splicing factor, arginine/serine-rich 13A [Pongo abelii]
gi|55727814|emb|CAH90660.1| hypothetical protein [Pongo abelii]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|300360549|ref|NP_001177936.1| serine/arginine-rich splicing factor 10 isoform 5 [Homo sapiens]
gi|291393216|ref|XP_002713069.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
gi|410170859|ref|XP_003960062.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|74139434|dbj|BAE40858.1| unnamed protein product [Mus musculus]
Length = 182
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|321472329|gb|EFX83299.1| hypothetical protein DAPPUDRAFT_195083 [Daphnia pulex]
Length = 221
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R +ERDI+R F YG + V I+ + FV+FE +A A+ + +L +SVE+
Sbjct: 11 PYRVKERDIERFFRGYGKLREVLIKNGYGFVEFEDYRDADDAVYELNGKELCGERVSVEH 70
Query: 77 A 77
A
Sbjct: 71 A 71
>gi|71897267|ref|NP_001026077.1| splicing factor, arginine/serine-rich 13A [Gallus gallus]
gi|53126728|emb|CAG30979.1| hypothetical protein RCJMB04_1g4 [Gallus gallus]
Length = 262
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|83765209|dbj|BAE55352.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 311
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV+ T E+A A E
Sbjct: 69 NLFVTGIHP-RLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|363755458|ref|XP_003647944.1| hypothetical protein Ecym_7289 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891980|gb|AET41127.1| hypothetical protein Ecym_7289 [Eremothecium cymbalariae
DBVPG#7215]
Length = 706
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALES 61
K++FV DP T+E+ +R F +G V V + + FAF+++ET+E ALE
Sbjct: 370 KSIFVSQLDPSVTKEKLTQR-FSKHGKVEDVNLIFKDNNTKVFAFIKYETEEATATALER 428
Query: 62 TDRSKLVDRVISVEY 76
+ + ++R + V+Y
Sbjct: 429 ENHASFLNRTMHVQY 443
>gi|241953799|ref|XP_002419621.1| RNA-binding protein, putative; nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223642961|emb|CAX43217.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 393
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T E ++ HF+ G ++ +R+ + FAF+ F+ +E AT
Sbjct: 208 PSRILFVGNL-SFDTTEDLLEEHFKHCGEIVKIRMATFQDTGKCKGFAFIDFKDEEGATT 266
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRR-GGYGRHSPYGRSPSPAYRRRPSP 116
AL+S L++R + +EY +D S+R P+R +G H + + +YR S
Sbjct: 267 ALKSKLTKMLINRKLRMEYG-EDRSKR-----RPKRINEFGDHHS---NNNESYRENNST 317
Query: 117 DYGRGRSPAYDRYN 130
G G+ P ++ N
Sbjct: 318 TTGNGK-PEFETSN 330
>gi|255931757|ref|XP_002557435.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582054|emb|CAP80218.1| Pc12g05910 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 332
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV T E+A A E
Sbjct: 69 NLFVTGIHP-RLTESDISRLFEKYGDVENCSIMLDPHTKESRGFGFVNMVTAEQADAAKE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|4001722|dbj|BAA35093.1| neural specific sr protein NSSR 2 [Mus musculus]
Length = 183
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|326519182|dbj|BAJ96590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 290
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 69 NLFVTGIHP-RLTEGDVSRLFEKYGDVESCSIMLDPHTKESRGFGFVKMVTTEQAEAAKE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGETIEGRTLSIEKA 144
>gi|407262482|ref|XP_003946424.1| PREDICTED: periphilin-1-like [Mus musculus]
Length = 588
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 89 DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
D P + R S Y R SP Y R S Y R RSP Y R P Y + RSP + R RS
Sbjct: 262 DRPPQYARDRSSQYARDRSPQYARDRSSHYARDRSPHYARDRSPHYARDRSPQYARDRS- 320
Query: 149 VPVYDRRRSPDYGRNRSPNFGRYR 172
Y R RSP Y R+RS + R R
Sbjct: 321 -SHYARDRSPQYARDRSSQYARDR 343
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
RR + H P RS Y R SP Y R RSP Y R P Y + RS + R RS P
Sbjct: 227 RRKTFSSHHPRDRSSH--YARDRSPHYARDRSPHYARDRPPQYARDRSSQYARDRS--PQ 282
Query: 152 YDRRRSPDYGRNRSPNFGRYR 172
Y R RS Y R+RSP++ R R
Sbjct: 283 YARDRSSHYARDRSPHYARDR 303
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 102 YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYG 161
Y R SP Y R SP Y R RS Y R P Y + RS + R RS Y R RS Y
Sbjct: 299 YARDRSPHYARDRSPQYARDRSSHYARDRSPQYARDRSSQYARDRS--SHYARDRSSHYA 356
Query: 162 RNRSPN 167
R+RSP+
Sbjct: 357 RDRSPH 362
>gi|68070817|ref|XP_677322.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497394|emb|CAH96506.1| conserved hypothetical protein [Plasmodium berghei]
Length = 224
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 75/178 (42%), Gaps = 49/178 (27%)
Query: 9 TLFVINFDP--IRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
TL+V N T+ +DI FE YG + + RNF FV F + +A A
Sbjct: 3 TLYVSNLSSKITTTKLQDI---FEKYGTIEKCYVISNPITKESRNFGFVTFNSSADAENA 59
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYG-----------RHSPYGRSPS 107
+ ++ + RVI+VE A +++ P G Y RH YGR
Sbjct: 60 MNKANKMDIEGRVINVEIAKRNEPH------EPTPGEYKGVQNMMKRYPMRHDYYGRRYD 113
Query: 108 PAY------RRRPSP---DYGRG----RSP--AYDRYNGPVYDQ----RRSPDHGRHR 146
P + RRP+P DYG+G +P YD+Y YD RRS D+ H+
Sbjct: 114 PHFDRRKYDSRRPNPYNRDYGKGYGYRNTPFRQYDKYARNSYDHRHYDRRSIDNKYHK 171
>gi|359318925|ref|XP_003638944.1| PREDICTED: serine/arginine-rich splicing factor 10 [Canis lupus
familiaris]
Length = 173
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|15292733|gb|AAK92735.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
Length = 352
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P +L+V R ERD++ HF G V V + R F F+ ++ +A
Sbjct: 41 ENPGNSLYVTGLS-HRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDA 99
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ + S D S L RVI+VE A
Sbjct: 100 NRCIRSLDHSVLQGRVITVEKA 121
>gi|449488891|ref|XP_004174435.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10 [Taeniopygia guttata]
Length = 262
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PXTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|307208990|gb|EFN86190.1| Nuclear receptor coactivator 5 [Harpegnathos saltator]
Length = 650
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
++ +FV + + +++ HF YG V+ I R F FVQF+ ++ A KA+++ D +
Sbjct: 13 SRRIFVGHLQTDDVTKLELEDHFSKYGTVIGSSINRGFGFVQFQDEQSAQKAIKNEDGAM 72
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGG 95
R I V A KD+ + ++ + GG
Sbjct: 73 FKGRRIDVRPAKKDNQSGNSGNNAKQMGG 101
>gi|449550007|gb|EMD40972.1| hypothetical protein CERSUDRAFT_111545 [Ceriporiopsis subvermispora
B]
Length = 286
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ L V IRT ERD+ F +G V V I R F F+ T EEA +
Sbjct: 77 PSNVLGVFGLS-IRTTERDLDDEFSRFGRVDKVTIVYDQRSDRSRGFGFITMSTTEEAGR 135
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
++ + +L R I V+Y++ D
Sbjct: 136 CIKELNGVELNGRRIRVDYSVTD 158
>gi|410170856|ref|XP_003960061.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328339|ref|XP_004024960.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
Length = 217
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|41055271|ref|NP_956827.1| splicing factor, arginine/serine-rich 13A [Danio rerio]
gi|33604116|gb|AAH56275.1| Zgc:65772 protein [Danio rerio]
gi|42542503|gb|AAH66442.1| Zgc:65772 [Danio rerio]
Length = 248
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N +R D++R F YG ++ V I R FA++QFE +A
Sbjct: 8 PNSSLFVRNISD-ESRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWVCGRQIEIQFAQGD 89
>gi|213408218|ref|XP_002174880.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212002927|gb|EEB08587.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 734
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N P + +R++ + FE YG + + +++ + F QF T EE AL S + L
Sbjct: 331 LFLGNLPPEKVSKREVWKIFEKYGRLAQISLKQTYGFAQFFTNEECAAALHSEQGTMLQG 390
Query: 70 RVISVE 75
R + ++
Sbjct: 391 RKLHLD 396
>gi|313234448|emb|CBY24647.1| unnamed protein product [Oikopleura dioica]
Length = 718
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-----NFAFVQFETQEEATKALES 61
++TLF+ N + + T E D+KR F YG +L + +++ +AFVQF ++A A+
Sbjct: 118 SRTLFIGNLEKVTTYE-DLKRQFFKYGKILKIDLKKINGVTRYAFVQFAKLDDARLAVHR 176
Query: 62 TDRSKLVDRVISVEYA 77
R KL ++ YA
Sbjct: 177 MQREKLGKNIVCTCYA 192
>gi|291231291|ref|XP_002735598.1| PREDICTED: RNA binding motif protein 4B-like isoform 1
[Saccoglossus kowalevskii]
Length = 238
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N + RD++ FE YG VL + +N+ FV + ++EA +AL++ + + +
Sbjct: 11 VFVGNLSK-SVQSRDLRDLFEKYGKVLECDVIKNYGFVHMDKEDEAKEALDALNSKEFMG 69
Query: 70 RVISVEYA 77
I VE +
Sbjct: 70 TNIKVELS 77
>gi|212539754|ref|XP_002150032.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
gi|210067331|gb|EEA21423.1| transformer-SR ribonucleoprotein, putative [Talaromyces marneffei
ATCC 18224]
Length = 341
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E DI R FE YG+V H + R F FV+ T E+A
Sbjct: 68 PGSNLFVTGIHP-RLTEADISRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADA 126
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + +S+E A
Sbjct: 127 AKEGLQGEVIDGLTLSIEKA 146
>gi|408391231|gb|EKJ70611.1| hypothetical protein FPSE_09121 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P + E ++ + FE YG+V H + R F FV+ T ++A
Sbjct: 72 PGSNLFVTGIHP-KLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 131 AKEGLQGEQIEGRTLSIEKA 150
>gi|407920811|gb|EKG13991.1| hypothetical protein MPH_08865 [Macrophomina phaseolina MS6]
Length = 286
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG+V H + R F FV+ T E+A
Sbjct: 70 PGSNLFVTGIHP-RLSEEEVTRLFEKYGDVEKCNIMRDPHTKESRGFGFVKMVTPEQADA 128
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 129 AKEGLQGEVIEGRTLSIEKA 148
>gi|344287390|ref|XP_003415436.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 2
[Loxodonta africana]
Length = 173
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|348570784|ref|XP_003471177.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Cavia
porcellus]
Length = 173
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|71043780|ref|NP_001020909.1| serine/arginine-rich splicing factor 10 [Rattus norvegicus]
gi|68533686|gb|AAH98831.1| FUS interacting protein (serine-arginine rich) 1 [Rattus
norvegicus]
Length = 164
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|358377462|gb|EHK15146.1| hypothetical protein TRIVIDRAFT_185271 [Trichoderma virens Gv29-8]
Length = 347
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ + FE YG V H + R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLSEAEVSKMFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSEQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 131 AKEGLQGEVIEGRTMSIEKA 150
>gi|403287344|ref|XP_003934909.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
Length = 173
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|221222294|gb|ACM09808.1| RNA-binding protein 4B [Salmo salar]
Length = 229
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ K L V N + + + +++ FE YG V I +NFAFV + +EA A++
Sbjct: 74 NQGAVK-LHVTNVE--KGNDDELRTLFEEYGTVSECAIVKNFAFVHMDNSDEALDAIKGL 130
Query: 63 DRSKLVDRVISVEYA-LKDDSERDDRYDSPRRGGYG--------RHSPYGRSPSPAYRR 112
D + + I V+ + + E ++ Y P+RGGY RH P P P+Y R
Sbjct: 131 DNVEFQGKRIHVQISKSRPRYEEEEDYPPPQRGGYWPPRGYPGERHDP----PPPSYLR 185
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P + +I+ F YG V I +NFAFV + ++ ATKA+ S KL
Sbjct: 4 IFIGNV-PREADKDEIQALFSQYGAVTECAIVKNFAFVHMDDRKSATKAIRSLHLYKLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TAINVE 68
>gi|67541012|ref|XP_664280.1| hypothetical protein AN6676.2 [Aspergillus nidulans FGSC A4]
gi|40738429|gb|EAA57619.1| hypothetical protein AN6676.2 [Aspergillus nidulans FGSC A4]
gi|259480260|tpe|CBF71228.1| TPA: transformer-SR ribonucleoprotein, putative (AFU_orthologue;
AFUA_7G05260) [Aspergillus nidulans FGSC A4]
Length = 307
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV T E+A A E
Sbjct: 68 NLFVTGIHP-RLTESDISRLFEKYGDVESCSIMVDPHTKESRGFGFVNMVTAEQADAAKE 126
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 127 GLQGEVIEGRTLSIEKA 143
>gi|300360545|ref|NP_001177935.1| serine/arginine-rich splicing factor 10 isoform 4 [Homo sapiens]
gi|332266731|ref|XP_003282351.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|397140012|ref|XP_003846473.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328341|ref|XP_004024961.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|14603220|gb|AAH10074.1| FUSIP1 protein [Homo sapiens]
Length = 173
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|430811674|emb|CCJ30871.1| unnamed protein product [Pneumocystis jirovecii]
Length = 773
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 5 RPTKTLFVINFDPIRTRER---DIKRHFEPYGNVLHVRIRRNF-----AFVQFETQEEAT 56
RP LFV + RT E+ + HF +GN+L+V++ +++ +FVQFE ++A
Sbjct: 190 RPAACLFVASLSSSRTDEQLCVSVTNHFRKWGNLLNVKVLKDWMQRPYSFVQFENFDDAK 249
Query: 57 KALESTDRSKLVDRVISVEYA 77
+AL + + R I VE A
Sbjct: 250 RALREAHNTVIDGRHIRVEKA 270
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 9/90 (10%)
Query: 9 TLFVINFDP-IRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
++FV +P + TRE + R F+ YG ++ + R FAF+QF++ A+ A+E
Sbjct: 368 SIFVGQLNPSLVTRESLLNR-FKKYGEIVECSLVNKPNSNRTAFAFLQFDSISGASAAVE 426
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDS 90
+ + S +DRVI V++ D YD+
Sbjct: 427 NENNSTFLDRVIRVQFRELHDKADLSGYDA 456
>gi|406700649|gb|EKD03814.1| RRM protein [Trichosporon asahii var. asahii CBS 8904]
Length = 423
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +F ++ IRTRERD++ F +G+V V I R F F+ + E+AT+
Sbjct: 176 PVLGVFGLS---IRTRERDLEDEFSRFGDVEKVVIVYDQRTDRSRGFGFITMRSTEDATR 232
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
+E + L R I V+Y+ +
Sbjct: 233 CIEKLNGIVLHGRAIRVDYSATN 255
>gi|296207043|ref|XP_002750472.1| PREDICTED: serine/arginine-rich splicing factor 10 isoform 2
[Callithrix jacchus]
Length = 262
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|294868390|ref|XP_002765514.1| Arginine/serine-rich-splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865557|gb|EEQ98231.1| Arginine/serine-rich-splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 477
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKA 58
+Q + + P RE +++ F G V V+I R +AF+QF+T+ A +A
Sbjct: 158 SQAGCASRIWVGGLPSDVREVELEDRFGKIGRVTDVKICQSSRDTYAFLQFDTEGAAAEA 217
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYDS 90
+E D++K I V +A + SE YDS
Sbjct: 218 IEDVDQTKFGGFTIKVAHATRQSSESRRPYDS 249
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 74/177 (41%), Gaps = 39/177 (22%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
+N P L V + T ERD+++ F YG + HV I R FAFV FE E
Sbjct: 284 SNPDPNCCLGVFGLS-LYTTERDLRQIFTKYGPISHVSIVYDQQSRRSRGFAFVYFENVE 342
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRR 113
EA KA E D +L R I V++++ R +P G Y Y R Y R
Sbjct: 343 EAKKAKERVDGIELDGRRIRVDFSITK------RPHTPTPGIYMGRPTYNRRRD--YHER 394
Query: 114 PSPDYGRGRSPAYDR------YNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNR 164
P Y RG Y+R Y G VY R R+P P Y R R R+R
Sbjct: 395 P---YDRG----YERDYYNRSYRGVVY---------RRRTPSPRYSRGRYQSRSRSR 435
>gi|378729160|gb|EHY55619.1| hypothetical protein HMPREF1120_03749 [Exophiala dermatitidis
NIH/UT8656]
Length = 833
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 66/154 (42%), Gaps = 20/154 (12%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N + +RD+ F +G + + I++ + FVQ+ AL++ S++
Sbjct: 379 LFVGNLASEKVTKRDLFHVFHKHGRLAQISIKQAYGFVQYLEASSCQAALQAEQGSEIRG 438
Query: 70 RVISVEYALKDDSERDD-------RYDSPRRGGYGRHSPYGRSPSPAY--------RRRP 114
R I +E + + R+ R SP RG +H YGR R P
Sbjct: 439 RKIHLEVSKPQKNTRNQAQGNKRRRSRSPDRGTARQHDRYGRHDFRDDRNRRDYRSTRSP 498
Query: 115 SPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
SP + RGR D Y G R +PD GR SP
Sbjct: 499 SPRHFRGR----DDYRGNAQSPRFAPD-GRQGSP 527
>gi|74141008|dbj|BAE22085.1| unnamed protein product [Mus musculus]
Length = 278
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|400596147|gb|EJP63931.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 334
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ + FE YG+V +I R F FV+ T E+A
Sbjct: 68 PGSNLFVTGIHP-RLSEAEVTKMFEKYGDVEKCQIMKDPHSKESRGFGFVKMVTPEQADA 126
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 127 AREGLQGEVIEGRTLSIEKA 146
>gi|358400404|gb|EHK49735.1| hypothetical protein TRIATDRAFT_297628 [Trichoderma atroviride IMI
206040]
Length = 344
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ + FE YG V H + R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLSEAEVSKMFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSEQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 131 AREGLQGEVIEGRTMSIEKA 150
>gi|226287356|gb|EEH42869.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 305
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 70 NLFVTGIHP-RLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKE 128
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 129 GLQGEVIEGRTLSIEKA 145
>gi|294461367|gb|ADE76245.1| unknown [Picea sitchensis]
gi|294463638|gb|ADE77346.1| unknown [Picea sitchensis]
Length = 220
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVR--------IRRNFAFVQFETQEEA 55
+ P TL+V R E+D++ HF G V+ R I R F FV + E+A
Sbjct: 38 ENPGNTLYVTGLS-TRVTEKDLEEHFSGEGKVIDCRLVVEPRTRISRGFGFVTMGSLEDA 96
Query: 56 TKALESTDRSKLVDRVISVE 75
+ ++ ++S L R I+VE
Sbjct: 97 ERCIKYLNQSILEGRFITVE 116
>gi|258566319|ref|XP_002583904.1| predicted protein [Uncinocarpus reesii 1704]
gi|237907605|gb|EEP82006.1| predicted protein [Uncinocarpus reesii 1704]
Length = 813
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 65/156 (41%), Gaps = 34/156 (21%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG + + I+ + FVQF ALE+
Sbjct: 341 PGSRLFVGNLPSERVTKRDLFHLFHKYGKLAQISIKPAYGFVQFMDATSCRNALEAEQNG 400
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP--YGRSPSPAYRRRPSPDYGRGR- 122
+ R I +E + P+R G + P GRS +R SPD G+ R
Sbjct: 401 TIRGRKIHLEIS------------KPQRSGRNANEPSKQGRS-----KRSRSPDIGKSRE 443
Query: 123 --------SPAYDR-YNG---PVYDQRRSPDHGRHR 146
S +DR NG P+ D+R PD RHR
Sbjct: 444 VGRGARSGSERHDRNLNGKRSPIVDRRDHPD--RHR 477
>gi|198415693|ref|XP_002128145.1| PREDICTED: similar to RNA binding motif protein 19 [Ciona
intestinalis]
Length = 766
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATKALESTDRSKLVD 69
P + E +K+ FEPYG + V++ R FAFV ++ E A KA D+S +++
Sbjct: 10 PSKINEEKLKKEFEPYGTITDVKLMFSKSGKFRRFAFVGYQFTENADKAKSKLDKSLILN 69
Query: 70 RVISVE 75
+ ISVE
Sbjct: 70 QKISVE 75
>gi|390473557|ref|XP_003734621.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 262
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ANDTRSEDLRREFGRYGPIVDVYVPPDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R + +++A D
Sbjct: 67 ALRNLDRKWICGRQMEIQFAQGD 89
>gi|444520122|gb|ELV12918.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 361
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 20/130 (15%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALE 60
+L V N RT ++R FE YG + V I R FAFV+F + A AL+
Sbjct: 5 SLKVDNLT-YRTSPDTLRRVFEKYGRIGDVYIPRDRFTKASRGFAFVRFYCKNHAEDALD 63
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
+ D L R + V+ A +D P YGR G++P P + DYGR
Sbjct: 64 AVDGVVLDGRKLRVQMAY---------HDGPPDLHYGRRC--GKTPPPEGKWEKDDDYGR 112
Query: 121 GRSPAYDRYN 130
RSP R++
Sbjct: 113 SRSPRRQRFS 122
>gi|46446527|ref|YP_007892.1| nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
gi|46400168|emb|CAF23617.1| probable nucleic acid-binding protein [Candidatus Protochlamydia
amoebophila UWE25]
Length = 112
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
K +FV N +T E +K HFE +G V+ +I + F FV+ E+ +A A
Sbjct: 1 MKKIFVGNL-SWKTSEEQLKAHFEAFGKVVSAKIVTDQMTGKSKGFGFVEMESANDAENA 59
Query: 59 LESTDRSKLVDRVISVEYALK-DDSER 84
+ + LVDR + V A + D SER
Sbjct: 60 IRELNGKPLVDRSLRVSLAQERDRSER 86
>gi|449434458|ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
partial [Cucumis sativus]
Length = 238
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ERD++ HF G V RI R FAFV + ++A +
Sbjct: 57 PGNTLYVTGLS-TRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 115
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 116 CVKHLNQSILEGRYITVE 133
>gi|71745456|ref|XP_827358.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei]
gi|70831523|gb|EAN77028.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261331563|emb|CBH14557.1| PABP2 [Trypanosoma brucei gambiense DAL972]
Length = 555
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATKALES 61
L+V NFD T ER +K F+P+G + V ++ R F FV F+ Q A +A++
Sbjct: 290 LYVKNFDDTVTSER-LKALFDPFGETVSVSVMMDKATKVSRCFGFVSFKEQSSAAQAIQE 348
Query: 62 TDRSKLVD-RVISVEYALKDDSERDDRYD 89
S + R + V YAL+ D+ R D
Sbjct: 349 LHGSTALGPRPLFVSYALRKDARRQTLED 377
>gi|295663727|ref|XP_002792416.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226279086|gb|EEH34652.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 308
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALES 61
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 74 LFVTGIHP-RLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 62 TDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 133 LQGEVIEGRTLSIEKA 148
>gi|225677904|gb|EEH16188.1| hypothetical protein PABG_06275 [Paracoccidioides brasiliensis
Pb03]
Length = 308
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 73 NLFVTGIHP-RLTESDVSRLFEKYGDVENCSIMLDPHTKESRGFGFVKMVTAEQADAAKE 131
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 132 GLQGEVIEGRTLSIEKA 148
>gi|344232964|gb|EGV64837.1| hypothetical protein CANTEDRAFT_104139 [Candida tenuis ATCC 10573]
Length = 360
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 28/137 (20%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEA 55
P++ LFV ++FD T E ++ HF G ++ +R+ + FAFV F+ + A
Sbjct: 195 PSRILFVGNLSFD---TTEDLLEEHFRHCGEIIKIRMATFEDTGKCKGFAFVDFKDEAGA 251
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDR--YDSPRRGGYGR--------HSPYGRS 105
T AL S KL++R + +EY +D S+R + DS R R H P G +
Sbjct: 252 TAALTSALTRKLINRPVRMEYG-EDRSKRTPKRFLDSERSNARERTAGESNDHHEPTGET 310
Query: 106 PS-PAYR---RRPSPDY 118
S P YR +RP +Y
Sbjct: 311 ASEPVYRPPVKRPRREY 327
>gi|426224259|ref|XP_004006291.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Ovis
aries]
Length = 262
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG V+ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRYGDLRREFGRYGPVVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|47086959|ref|NP_998482.1| uncharacterized protein LOC406277 [Danio rerio]
gi|45595715|gb|AAH67153.1| Zgc:56141 [Danio rerio]
Length = 341
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ P K L V N + + + +++ FE YG V I +NFAFV +EA A++
Sbjct: 74 NQGPVK-LHVANVE--KGTDDELRALFEDYGTVAECAIIKNFAFVHMNNSDEAMDAIKGL 130
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRG 94
D ++ + I V+ + +D Y P G
Sbjct: 131 DNTEFQGKRIHVQISKSRPRGEEDDYGHPDAG 162
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P + ++K F YG V I +NFAFV + ++ ATKA+++ KL
Sbjct: 4 IFIGNL-PQQAEVDELKSLFSQYGTVTECAIIKNFAFVHMDDRKSATKAIKNLHLYKLHG 62
Query: 70 RVISVE 75
I+VE
Sbjct: 63 TPINVE 68
>gi|308505910|ref|XP_003115138.1| hypothetical protein CRE_28371 [Caenorhabditis remanei]
gi|308259320|gb|EFP03273.1| hypothetical protein CRE_28371 [Caenorhabditis remanei]
Length = 747
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 102 YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPV------PVYDRR 155
Y P P P YG RSP YD GPVY R P + R P+ P+YD
Sbjct: 565 YDNPPGPINDNPREPVYGNSRSPNYDNPRGPVYGNPRGPINDNPREPIYGNPRGPIYDNP 624
Query: 156 RSPDYGRNRSPNF 168
R P Y +RSPN+
Sbjct: 625 REPIYDNSRSPNY 637
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 12/98 (12%)
Query: 82 SERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPD 141
+ R YD+PR YG +P G P P YG R P YD P+YD RSP+
Sbjct: 583 NSRSPNYDNPRGPVYG--NPRG----PINDNPREPIYGNPRGPIYDNPREPIYDNSRSPN 636
Query: 142 HGRHRSPV------PVYDRRRSPDYGRNRSPNFGRYRR 173
+ R PV P+YD R P YG R P + R+
Sbjct: 637 YDNPRGPVYGNPRGPMYDNPREPIYGNPRGPIYDNARQ 674
Score = 38.5 bits (88), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 89 DSPRRGGYG--RHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHR 146
D+PR YG R Y P Y SP+Y R P Y GP+YD R P +G R
Sbjct: 606 DNPREPIYGNPRGPIYDNPREPIYDNSRSPNYDNPRGPVYGNPRGPMYDNPREPIYGNPR 665
Query: 147 SPVPVYDRRRSP 158
P+YD R P
Sbjct: 666 G--PIYDNARQP 675
>gi|326477886|gb|EGE01896.1| RNA-binding protein Nab3 [Trichophyton equinum CBS 127.97]
Length = 930
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N R +RD+ F +G + + I++ + F+QF + KAL++ S +
Sbjct: 449 LFIGNLPTERVTKRDLFHIFHMHGKLAQISIKQAYGFIQFLEPDSCRKALQAQQGSTIRG 508
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + +R R P GR RSP R P P GR + YDR
Sbjct: 509 RKIHLEIS---KPQRGARNSGPTENS-GRKQRRSRSPEYERNREPPPRGGRSAADRYDRG 564
Query: 130 NG 131
G
Sbjct: 565 PG 566
>gi|148708748|gb|EDL40695.1| mCG51743 [Mus musculus]
Length = 527
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 89 DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
D P + R S Y R SP Y R S Y R RSP Y R P Y + RSP + R RS
Sbjct: 201 DRPPQYARDRSSQYARDRSPQYARDRSSHYARDRSPHYARDRSPHYARDRSPQYARDRS- 259
Query: 149 VPVYDRRRSPDYGRNRSPNFGRYR 172
Y R RSP Y R+RS + R R
Sbjct: 260 -SHYARDRSPQYARDRSSQYARDR 282
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
RR + H P RS Y R SP Y R RSP Y R P Y + RS + R RS P
Sbjct: 166 RRKTFSSHHPRDRSSH--YARDRSPHYARDRSPHYARDRPPQYARDRSSQYARDRS--PQ 221
Query: 152 YDRRRSPDYGRNRSPNFGRYR 172
Y R RS Y R+RSP++ R R
Sbjct: 222 YARDRSSHYARDRSPHYARDR 242
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 102 YGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYG 161
Y R SP Y R SP Y R RS Y R P Y + RS + R RS Y R RS Y
Sbjct: 238 YARDRSPHYARDRSPQYARDRSSHYARDRSPQYARDRSSQYARDRS--SHYARDRSSHYA 295
Query: 162 RNRSPN 167
R+RSP+
Sbjct: 296 RDRSPH 301
>gi|425773488|gb|EKV11840.1| hypothetical protein PDIP_54740 [Penicillium digitatum Pd1]
gi|425775784|gb|EKV14036.1| hypothetical protein PDIG_35190 [Penicillium digitatum PHI26]
Length = 343
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E DI R FE YG+V H + R F FV T E+A A E
Sbjct: 69 NLFVTGIHP-RLTESDISRLFEKYGDVDNCSIMLDPHTKESRGFGFVNMVTAEQADAAKE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|449491291|ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
Length = 244
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ERD++ HF G V RI R FAFV + ++A +
Sbjct: 63 PGNTLYVTGLS-TRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDANR 121
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 122 CVKHLNQSILEGRYITVE 139
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ TLF+ N T E I+ F YGNV V + + F +V F +QEEAT
Sbjct: 346 PSNTLFIGNLSFDCTNET-IQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATA 404
Query: 58 ALESTDRSKLVDRVISVEYA 77
ALE+ + R + V++A
Sbjct: 405 ALEALQGQDVAGRPLRVDFA 424
>gi|46110044|ref|XP_382080.1| hypothetical protein FG01904.1 [Gibberella zeae PH-1]
Length = 342
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV P + E ++ + FE YG+V +I R+ F FV+ T ++A
Sbjct: 72 PGSNLFVTGIHP-KLSEAEVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSDQAEA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E ++ R +S+E A
Sbjct: 131 AKEGLQGEQIEGRTLSIEKA 150
>gi|307192389|gb|EFN75624.1| Serine-arginine protein 55 [Harpegnathos saltator]
Length = 313
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
R RERD+++ F YG + V ++ FAFV+F+ +A A+ + +L+ I+VE A
Sbjct: 13 RVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERITVERAR 72
Query: 79 KDDSERDDRYDSPRRGGYG 97
D RGGYG
Sbjct: 73 GTPRGSDQWRYGDSRGGYG 91
>gi|393245625|gb|EJD53135.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 265
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R D+++ FE YG ++ R+ F FV+FE+ ++A + ++ + + I VE+
Sbjct: 11 PTDARSEDVQKFFEGYGRIVDCRVMTGFGFVEFESSKDAEEVVQVFNGKAFMGAPILVEF 70
Query: 77 A 77
A
Sbjct: 71 A 71
>gi|410911524|ref|XP_003969240.1| PREDICTED: uncharacterized protein LOC101080136 isoform 2
[Takifugu rubripes]
Length = 374
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
R RE D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RARENDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT- 70
Query: 79 KDDSERDDRYDS---PRRGGYGR 98
RD Y PR GGYGR
Sbjct: 71 -KGPRRDGGYSGRSKPRPGGYGR 92
>gi|326473044|gb|EGD97053.1| hypothetical protein TESG_04474 [Trichophyton tonsurans CBS 112818]
Length = 930
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N R +RD+ F +G + + I++ + F+QF + KAL++ S +
Sbjct: 449 LFIGNLPTERVTKRDLFHIFHMHGKLAQISIKQAYGFIQFLEPDSCRKALQAQQGSTIRG 508
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + +R R P GR RSP R P P GR + YDR
Sbjct: 509 RKIHLEIS---KPQRGARNSGPTENS-GRKQRRSRSPEYERNREPPPRGGRSAADRYDRG 564
Query: 130 NG 131
G
Sbjct: 565 PG 566
>gi|328871249|gb|EGG19620.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 299
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
++V F RT E+D++ F+ +G +L + ++ FAFV+F+ ++ A +A++ D K VD
Sbjct: 62 IYVGKFSS-RTGEKDLEETFKKFGKILSLDMKAGFAFVEFDNEKSANQAIDEMD-GKEVD 119
Query: 70 --RVISVEYALKDDSERDDRYDSPRRGGYGRHSP 101
++I + D+ Y RG + R+ P
Sbjct: 120 GEKLIVQKSHGGRKRSSDECYLCRGRGHWARNCP 153
>gi|388516667|gb|AFK46395.1| unknown [Lotus japonicus]
Length = 268
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATKALE 60
TL+V R ERD++ HF G V RI R FAF+ +T E+A + ++
Sbjct: 92 TLYVTGLSS-RVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEDANRCVK 150
Query: 61 STDRSKLVDRVISVE 75
++S L R I+VE
Sbjct: 151 YLNQSVLEGRYITVE 165
>gi|346469351|gb|AEO34520.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N P TR D++ F YG + V I R FA+VQFE +A
Sbjct: 9 PNSSLFIRNV-PDGTRPDDLRSLFGKYGPLTDVYIPVDYYTRRPRGFAYVQFEDLRDAED 67
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
A+ S DR++ R + +E+A D
Sbjct: 68 AMYSLDRTRFYGRELEIEFAQGD 90
>gi|403216303|emb|CCK70800.1| hypothetical protein KNAG_0F01320 [Kazachstania naganishii CBS
8797]
Length = 415
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQ 52
M+ P++ LF N T E +K HF+ G ++ +R+ + FAFV F+T+
Sbjct: 241 MSKNPPSRILFCGNLSYTTTEEL-LKAHFQHCGEIIKIRMATFEDSGKCKGFAFVDFKTE 299
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
E AT AL+ K+ R + +EY
Sbjct: 300 EGATNALKDKACRKIAMRPLRMEYG 324
>gi|340715217|ref|XP_003396115.1| PREDICTED: RNA-binding protein 28-like [Bombus terrestris]
Length = 769
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-------NFAFVQFETQEEATK 57
R + VI + E D+K+HF PYG+V +RI + AF+QFE + A K
Sbjct: 193 RKKRARIVIRNLSFQATEEDLKKHFSPYGSVEEIRILKRSDGKNIGCAFLQFEHVQSAAK 252
Query: 58 ALESTDRSKLVDRVISVEYALKDD 81
A+ T+ L++R I V++A+ +
Sbjct: 253 AIHYTNLQPLLNRPIIVDWAVSKN 276
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 16/90 (17%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNF-------AFVQFETQEEATKALESTDRSKLVD 69
P +T D+K+ +EP+G +L + + F+QF+ ++A+KA+ ST++ + +
Sbjct: 51 PFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCCFIQFKQLKDASKAIFSTNKKEFLG 110
Query: 70 RVISVEYA---------LKDDSERDDRYDS 90
R+IS +A LK +SE+ + D+
Sbjct: 111 RIISSSWAVSRSKYCEKLKKESEKAENLDN 140
>gi|42561780|ref|NP_563787.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|28973767|gb|AAO64199.1| putative transformer-SR ribonucleoprotein [Arabidopsis thaliana]
gi|332189991|gb|AEE28112.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 382
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P +L+V R ERD++ HF G V V + R F F+ ++ +A
Sbjct: 71 ENPGNSLYVTGLS-HRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDA 129
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ + S D S L RVI+VE A
Sbjct: 130 NRCIRSLDHSVLQGRVITVEKA 151
>gi|336257891|ref|XP_003343767.1| hypothetical protein SMAC_04425 [Sordaria macrospora k-hell]
gi|380091605|emb|CCC10737.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 344
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E+A
Sbjct: 72 PGSNLFVTGIHP-RLEEAEVTRLFEKYGEVEKCQIMKDPHTGESRGFGFVKMVTPEQAQA 130
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + R +S+E A
Sbjct: 131 AKDGLQGEVIEGRTLSIEMA 150
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEAT 56
P +TLFV I++D T E+ +KR FE YG++ VR+ R + F++FE +
Sbjct: 96 PFRTLFVGGISYD---TTEKKLKREFEQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMK 152
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERDDRYDS--PRRGGYGRHSPYGRSPSP 108
+A ++ D K+ R + V D ER PRR G GR P G + P
Sbjct: 153 EAYKNADGKKIDGRRVLV------DVERARTVPGWLPRRLGGGRGKPRGSNTKP 200
>gi|116197981|ref|XP_001224802.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
gi|88178425|gb|EAQ85893.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
Length = 374
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P LFV P R E +I R FE YG V +I R F FV+ T E A
Sbjct: 68 PGSNLFVTGIHP-RLEESEITRLFEKYGEVEKCQIMKDPHSGESRGFGFVKMVTSEMADA 126
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+E + R +++E A
Sbjct: 127 AIEGLRGEVIEGRTLNIEKA 146
>gi|332807982|ref|XP_513202.3| PREDICTED: uncharacterized protein LOC456627 isoform 5 [Pan
troglodytes]
Length = 176
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|240279660|gb|EER43165.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325092793|gb|EGC46103.1| transformer-SR ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 315
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALES 61
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 74 LFVTGIHP-RLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 62 TDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 133 LQGEVIEGRTLSIEKA 148
>gi|225562846|gb|EEH11125.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 319
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALES 61
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 74 LFVTGIHP-RLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 62 TDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 133 LQGEVIEGRTLSIEKA 148
>gi|398390533|ref|XP_003848727.1| hypothetical protein MYCGRDRAFT_111161 [Zymoseptoria tritici
IPO323]
gi|339468602|gb|EGP83703.1| hypothetical protein MYCGRDRAFT_111161 [Zymoseptoria tritici
IPO323]
Length = 866
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N + +RDI F YG++ V I++ + FVQF E+ +AL ++ D
Sbjct: 384 LFVGNLSSEKVTKRDIYHVFHNYGDLAQVSIKQAYGFVQFLRPEDCARALSGEQGRQIRD 443
Query: 70 RVISVEYA 77
+ I +E +
Sbjct: 444 KKIHLEVS 451
>gi|357123127|ref|XP_003563264.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 272
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V + +R++K +F G V+ H R+ R FAF+ +T E+A + ++
Sbjct: 67 TLYVTGLS-SKVTDRELKDYFNKEGKVVSCHVVLEPHTRVSRGFAFITMDTVEDAERCIK 125
Query: 61 STDRSKLVDRVISVE 75
++S+L R I+VE
Sbjct: 126 YLNQSELQGRHITVE 140
>gi|348517719|ref|XP_003446380.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Oreochromis niloticus]
Length = 293
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RE+D++R F+ YG + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLSP-SAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|115400081|ref|XP_001215629.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191295|gb|EAU32995.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALES 61
LFV P R E DI R FE YG+V H + R F FV+ T E+A A E
Sbjct: 57 LFVTGIHP-RLTEADISRLFEKYGDVENCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 115
Query: 62 TDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 116 LQGEVIEGRTLSIEKA 131
>gi|440636081|gb|ELR06000.1| hypothetical protein GMDG_01961 [Geomyces destructans 20631-21]
Length = 307
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V H + R F FV+ T ++A
Sbjct: 77 PGSNLFVTGIHP-RLSEAEVTRLFEKYGEVEKCQIMLDPHTKESRGFGFVKMVTADQADA 135
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 136 AKEGLQGEVIEGRTLSIEKA 155
>gi|380470898|emb|CCF47532.1| RNA recognition domain-containing protein containing protein
[Colletotrichum higginsianum]
Length = 532
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 1 MANQRPTKTL--FVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKA 58
+++ RP + F N R +RD+ F YG + + ++ + FVQ+ + E+A A
Sbjct: 59 LSSGRPDGAIDFFSGNLSSERVSKRDVFDIFHKYGRLAQISLKSAYGFVQYHSLEDAQAA 118
Query: 59 LESTDRSKLVDRVISVEYA-LKDDSERDDRYDSPRRGGYGRHSPYGR------SPSPAYR 111
+++ ++ R I +E + + + ++R SP RGG G GR S
Sbjct: 119 MDNLQGIEIKGRKIHLEISRAQKKKDGNERARSPDRGGRGGARQSGRQDRQDAGNSHQDS 178
Query: 112 RRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSP-NFGR 170
RR DY R+ R G R HGR R DR R GR+RSP +GR
Sbjct: 179 RRNRDDYRPSRNSPSRRNGG----HAREDSHGRERHHYDAQDRSR----GRSRSPQGYGR 230
Query: 171 YR 172
+
Sbjct: 231 QK 232
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 21/121 (17%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEAT 56
P KT+ V ++FD E+ ++R FE YG V VR+ R +AFV++E + +
Sbjct: 149 PYKTILVARLSFD---VTEKKLRREFEEYGPVKRVRLVMDKNGKSRGYAFVEYEHKADMK 205
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERDDRYDS--PRRGGYGRHSPYGRSPSPAYRRRP 114
+A ++ D K+ R + V D ER ++ PRR G G +P GR P R++P
Sbjct: 206 EAYKAADGKKIEGRRVLV------DVERGRTVENWKPRRLGGGLGAP-GREPKAPKRQKP 258
Query: 115 S 115
Sbjct: 259 G 259
>gi|154280022|ref|XP_001540824.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150412767|gb|EDN08154.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 311
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALES 61
LFV P R E D+ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 74 LFVTGIHP-RLTESDVSRLFEKYGDVESCSIMVDPHTKESRGFGFVKMVTAEQADAAKEG 132
Query: 62 TDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 133 LQGEVIEGRTLSIEKA 148
>gi|291190904|ref|NP_001167419.1| RNA-binding protein 4 [Salmo salar]
gi|223648750|gb|ACN11133.1| RNA-binding protein 4 [Salmo salar]
Length = 316
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N + T E +++ FE YG V I +N+ FV +EEA KA+ + +L
Sbjct: 4 IFVGNVNS-STTESELRTLFEKYGQVSDCDILKNYGFVHMNEEEEAQKAVAELHKHELNG 62
Query: 70 RVISVEYA 77
I+VE+A
Sbjct: 63 ARITVEFA 70
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
R ++V N P T I+ F+P+G V+ I +NFAFV + + EA +A+ +
Sbjct: 75 RNATKIYVGNV-PEGTTAAKIRELFQPFGKVVECDIVKNFAFVHMQRENEAYEAISKLNH 133
Query: 65 SKLVDRVISVEYALKDDSERDDRYD 89
SK+ + I V + +++ R+ R D
Sbjct: 134 SKMEGQKIFVSIS-RNNQARNGRGD 157
>gi|294873441|ref|XP_002766629.1| Arginine/serine-rich-splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239867661|gb|EEQ99346.1| Arginine/serine-rich-splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 477
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKA 58
+Q + + P RE +++ F G V V+I R +AF+QF+T+ A +A
Sbjct: 158 SQAGCASRIWVGGLPSDVREVELEDRFGKIGRVTDVKICQSSRDTYAFLQFDTEGAAAEA 217
Query: 59 LESTDRSKLVDRVISVEYALKDDSE 83
+E D++K I V +A + SE
Sbjct: 218 IEDVDQTKFGGFTIKVAHATRQSSE 242
>gi|218198902|gb|EEC81329.1| hypothetical protein OsI_24503 [Oryza sativa Indica Group]
Length = 273
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V R ER++K +F G V H R+ R FAFV +T E+A + ++
Sbjct: 66 TLYVTGLS-SRVTERELKDYFSKEGRVTSCHVVLEPHTRVSRGFAFVTMDTVEDAERCIK 124
Query: 61 STDRSKLVDRVISVE 75
++S + R I+VE
Sbjct: 125 YLNQSVMEGRNITVE 139
>gi|222636246|gb|EEE66378.1| hypothetical protein OsJ_22698 [Oryza sativa Japonica Group]
Length = 284
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V R ER++K +F G V H R+ R FAFV +T E+A + ++
Sbjct: 77 TLYVTGLS-SRVTERELKDYFSKEGRVTSCHVVLEPHTRVSRGFAFVTMDTVEDAERCIK 135
Query: 61 STDRSKLVDRVISVE 75
++S + R I+VE
Sbjct: 136 YLNQSVMEGRNITVE 150
>gi|303277453|ref|XP_003058020.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460677|gb|EEH57971.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 930
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKAL 59
+ T V+ +RDI++ F P+G + R+ R FAFV+ T+ EAT AL
Sbjct: 810 SATKIVVRNVAFEATKRDIQKLFNPFGALKSCRLPKKFDGNHRGFAFVELSTKREATSAL 869
Query: 60 ESTDRSKLVDRVISVEYALKDD 81
E+ + L R + +E A + D
Sbjct: 870 EALRGTHLYGRKLVIERAAEGD 891
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKA 58
P+ L V N TR+R ++ HF G V V+I R AFV F+T+ +ATKA
Sbjct: 34 PSSRLCVKNIPKHLTRDR-LREHFAERGEVTDVKILKTSDGKSRCMAFVGFKTEADATKA 92
Query: 59 LESTDRSKLVDRVISVEYA 77
LE D + + I+VEYA
Sbjct: 93 LEYFDNTFVDTSKIAVEYA 111
>gi|300360554|ref|NP_001177938.1| serine/arginine-rich splicing factor 10 isoform 6 [Homo sapiens]
gi|332266733|ref|XP_003282352.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Nomascus
leucogenys]
gi|332807985|ref|XP_001166490.2| PREDICTED: uncharacterized protein LOC456627 isoform 4 [Pan
troglodytes]
gi|344287392|ref|XP_003415437.1| PREDICTED: serine/arginine-rich splicing factor 10-like isoform 3
[Loxodonta africana]
gi|345793665|ref|XP_866416.2| PREDICTED: serine/arginine-rich splicing factor 10 isoform 5
[Canis lupus familiaris]
gi|403287346|ref|XP_003934910.1| PREDICTED: serine/arginine-rich splicing factor 10 [Saimiri
boliviensis boliviensis]
gi|410170861|ref|XP_003960063.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
gi|426328343|ref|XP_004024962.1| PREDICTED: serine/arginine-rich splicing factor 10 [Gorilla
gorilla gorilla]
gi|194382312|dbj|BAG58911.1| unnamed protein product [Homo sapiens]
gi|410223012|gb|JAA08725.1| serine/arginine-rich splicing factor 10 [Pan troglodytes]
Length = 165
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|350397588|ref|XP_003484924.1| PREDICTED: RNA-binding protein 28-like [Bombus impatiens]
Length = 768
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-------NFAFVQFETQEEATK 57
R + VI + E D+K+HF PYG V +RI + AF+QFE + A K
Sbjct: 192 RKKRARIVIRNLSFQATEEDLKKHFSPYGAVEEIRILKRSDGKNIGCAFLQFEHVQSAAK 251
Query: 58 ALESTDRSKLVDRVISVEYALKDD 81
A+ T+ L++R I V++A+ +
Sbjct: 252 AIHYTNLQSLLNRPIIVDWAVSKN 275
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNF-------AFVQFETQEEATKALESTDRSKLVD 69
P +T D+K+ +EP+G +L + + F+QF+ ++A+KA+ ST++ + +
Sbjct: 51 PFKTTPEDVKKLYEPFGEILEINFPKRTDGSPVGCCFIQFKQLKDASKAIFSTNKKEFLG 110
Query: 70 RVISVEYA---------LKDDSERDDRYDS 90
R+I+ +A LK DSE+ D+
Sbjct: 111 RIINSSWAVSRSKYCEKLKKDSEKAKNLDN 140
>gi|336259387|ref|XP_003344495.1| hypothetical protein SMAC_08745 [Sordaria macrospora k-hell]
gi|380087464|emb|CCC05381.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 912
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 70/173 (40%), Gaps = 46/173 (26%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N R +R++ F +G + + ++ + FVQ+ T EE A+ +L
Sbjct: 444 IFIGNLSCERVSKREVFDVFSKFGRLAQISLKNAYGFVQYHTIEEGLAAIRGCRDIELGG 503
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP-----------------SPAYRR 112
R I++E + K D R + D +GR RSP P +RR
Sbjct: 504 RAINLEISKKQDRARKEHSD------HGRERERERSPDRRPQRDTRIRDRYEARDPGWRR 557
Query: 113 ---RPSPDYGRGRSP------------AYDRYNGPVYDQRRSPDHGRHRSPVP 150
RP P GR SP + DR GP YD RRS RSP P
Sbjct: 558 DDYRPGP--GRSPSPRRGSRDGRYARDSRDRDFGPGYDSRRS------RSPPP 602
>gi|395854840|ref|XP_003799887.1| PREDICTED: serine/arginine-rich splicing factor 10 [Otolemur
garnettii]
Length = 221
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|50540286|ref|NP_001002610.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
gi|49900455|gb|AAH75982.1| Splicing factor, arginine/serine-rich 5b [Danio rerio]
Length = 285
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLNP-SAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|54291012|dbj|BAD61690.1| putative transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group]
gi|54291611|dbj|BAD62534.1| putative transformer-SR ribonucleoprotein [Oryza sativa Japonica
Group]
gi|215737009|dbj|BAG95938.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 273
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL+V R ER++K +F G V H R+ R FAFV +T E+A + ++
Sbjct: 66 TLYVTGLS-SRVTERELKDYFSKEGRVTSCHVVLEPHTRVSRGFAFVTMDTVEDAERCIK 124
Query: 61 STDRSKLVDRVISVE 75
++S + R I+VE
Sbjct: 125 YLNQSVMEGRNITVE 139
>gi|221057546|ref|XP_002261281.1| Polyadenylate binding protein [Plasmodium knowlesi strain H]
gi|194247286|emb|CAQ40686.1| Polyadenylate binding protein, putative [Plasmodium knowlesi strain
H]
Length = 392
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATK 57
+P T+FV + P ++D+KRHF YGN+L I+ R + F+ FE Q+ A
Sbjct: 206 KPGCTIFVF-YLPNDWSDKDLKRHFSHYGNILGATIKRETNGKSRGYGFINFENQQSAIN 264
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRP--- 114
A+ + ++ + V ++ +Y + R G ++ YG P
Sbjct: 265 AVAGMNGFNAGNKYLKVSIKKGEEQYLAPQYLNIDRMG---NNSYGSPSPPPPPMTCHGN 321
Query: 115 -SPDYGRGR 122
SP++G G
Sbjct: 322 DSPNFGSGE 330
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKAL 59
N + ++FV NF P E DI+ +F +G + +V I ++ +A++QF E KA+
Sbjct: 13 NNFQSNSIFVYNF-PTEWTENDIQNNFMIFGTINNVIIDKDINMYAYIQFHDGEACQKAI 71
Query: 60 ESTDRSKLVDRVISV 74
E + ++ +V+ V
Sbjct: 72 EVMNGKEVSGKVLKV 86
>gi|442761097|gb|JAA72707.1| Putative splicing factor sc35, partial [Ixodes ricinus]
Length = 226
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N P TR D++ F YG + V I R FA+VQFE +A
Sbjct: 30 PNSSLFIRNV-PDGTRPEDLRSLFGKYGPITDVYIPVDYYARRPRGFAYVQFEDLRDAED 88
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
A+ S DR++ R + +E+A D
Sbjct: 89 AMYSLDRTRFYGRELEIEFAQGD 111
>gi|396081464|gb|AFN83081.1| putative arginine/serine rich pre-mRNA splicing factor
[Encephalitozoon romaleae SJ-2008]
Length = 296
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 67/159 (42%), Gaps = 22/159 (13%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVE 75
P E IK +F +G V V ++ + F+ F+++ + L RS +D ISVE
Sbjct: 9 PNHVNEEQIKEYFGQFGEVTDVSLKGTYGFLNFDSESSIARVL--NQRSHTIDGAPISVE 66
Query: 76 YALK----DDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY-GRGRSPA----- 125
A D E DRY RGGY H R +R P P GRSP
Sbjct: 67 RANGRKRPLDGEYHDRYMDMGRGGYSPH----RGDYRGFRNAPYPPMRYDGRSPGRYDPR 122
Query: 126 -YDRYNG--PVY--DQRRSPDHGRHRSPVPVYDRRRSPD 159
DRY G P Y D +RS D + + P++ R D
Sbjct: 123 FGDRYGGRSPEYRGDHQRSRDFCEYCNSCPIHGMRDMMD 161
>gi|156101397|ref|XP_001616392.1| poly(A)-binding protein [Plasmodium vivax Sal-1]
gi|148805266|gb|EDL46665.1| poly(A)-binding protein, putative [Plasmodium vivax]
Length = 392
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATK 57
+P T+FV + P ++D+KRHF YGN+L I+ R + F+ FE Q+ A
Sbjct: 206 KPGCTIFVF-YLPNDWSDKDLKRHFSHYGNILGATIKRETNGKSRGYGFINFENQQSAIN 264
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSP------RRGGYGRHSPYGRSPSPAYR 111
A+ + ++ + V ++K E +Y +P R G SP P
Sbjct: 265 AVAGMNGFNAGNKYLKV--SIKKGEE---QYLAPQYLNIDRMGNNSYGSPPPPPPPMTCH 319
Query: 112 RRPSPDYGRG 121
SP++G G
Sbjct: 320 GNDSPNFGNG 329
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTDRS 65
++FV NF P E DIK++F +G + +V I ++ +A++QF E KA+E +
Sbjct: 19 SIFVYNF-PSEWMENDIKKNFMIFGTINNVIIDKDINMYAYIQFHDGEACQKAMEVMNGK 77
Query: 66 KLVDRVISV 74
++ +V+ V
Sbjct: 78 EVSGKVLKV 86
>gi|22902265|gb|AAH37591.1| FUS interacting protein (serine-arginine rich) 1 [Mus musculus]
Length = 261
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N T+ D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTQSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|119195113|ref|XP_001248160.1| hypothetical protein CIMG_01931 [Coccidioides immitis RS]
Length = 864
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG + + I+ + FVQF ALE+
Sbjct: 403 PGSRLFVGNLPSERVTKRDLFHLFHKYGKLAQISIKPAYGFVQFMDATSCRNALEAEQGG 462
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY------G 119
+ R I +E + P+R R++P PS RR SPDY G
Sbjct: 463 VIRGRKIHLEIS------------KPQRS--SRNAPEPSKPS-GLRRSRSPDYSRNRDVG 507
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGR 144
RG +RY+ D++ S + GR
Sbjct: 508 RGGRLGSERYDRVAGDRKSSVNEGR 532
>gi|390604021|gb|EIN13412.1| hypothetical protein PUNSTDRAFT_139962 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 521
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TR D++ F GN++++ ++ + FV+FET+E A +++ + + I
Sbjct: 87 IGGLPEHTRREDLQSCFGKIGNIVNIELKVGYGFVEFETREAAEESVAKYNEGYFMGNKI 146
Query: 73 SVEYA-----LKDDSERDDRYDSPRRGGYGRHSPYGRSPS 107
VE + K SE + + G + R P PS
Sbjct: 147 RVEISHGGRTAKYQSEPGACFKCGQLGHWARECPNSGPPS 186
>gi|383415877|gb|AFH31152.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N TR D++R F YG ++ V I R FA+VQFE EA
Sbjct: 8 PNTSLFIRNVADA-TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVREAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|327308522|ref|XP_003238952.1| hypothetical protein TERG_00938 [Trichophyton rubrum CBS 118892]
gi|326459208|gb|EGD84661.1| hypothetical protein TERG_00938 [Trichophyton rubrum CBS 118892]
Length = 933
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N R +RD+ F +G + + I++ + F+QF + KAL++ S +
Sbjct: 447 LFIGNLPTERVTKRDLFHIFHMHGKLAQISIKQAYGFIQFLEPDSCRKALQAQQGSTIRG 506
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + +R R P GR RSP R P P GR + YDR
Sbjct: 507 RKIHLEIS---KPQRGARNSGPTENS-GRKQRRSRSPEYERNREPPPRGGRSAADRYDRG 562
Query: 130 NG 131
G
Sbjct: 563 PG 564
>gi|209155952|gb|ACI34208.1| RNA-binding protein 4B [Salmo salar]
Length = 345
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ P K L V N + + +++ FE YG V I +NFAF+ +EA A++
Sbjct: 74 NQGPVK-LHVANVE--KGNGDELRTLFEEYGTVTECAIIKNFAFIHMSNSDEAKDAIKGL 130
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPR-RGGY 96
D + + I V+ + ++ Y P RGGY
Sbjct: 131 DNTDFQGKRIHVQMSKSRPRGEEEDYGPPLDRGGY 165
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P + +I+ F +G V +N+AFV + ++ ATKA+ S KL
Sbjct: 4 IFIGNL-PNEVEKDEIEALFTEHGTVTECAKFKNYAFVHMDDRKSATKAIRSLHLFKLHG 62
Query: 70 RVISVE 75
R I+VE
Sbjct: 63 RPINVE 68
>gi|358385967|gb|EHK23563.1| hypothetical protein TRIVIDRAFT_11373, partial [Trichoderma virens
Gv29-8]
Length = 773
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N + +RD+ F YG + + ++ + FVQ+ T EE ALE+ ++
Sbjct: 311 IFIGNLSSDKVSKRDVFDIFHRYGRLAQISLKSAYGFVQYHTVEEGRSALENLQGMEVKG 370
Query: 70 RVISVEYALKDDSERDDRYDSP 91
R I +E + D + +R SP
Sbjct: 371 RRIHLEISRLQDKSKKERNRSP 392
>gi|294947232|ref|XP_002785285.1| pre-mRNA-splicing factor srp1, putative [Perkinsus marinus ATCC
50983]
gi|239899058|gb|EER17081.1| pre-mRNA-splicing factor srp1, putative [Perkinsus marinus ATCC
50983]
Length = 123
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
TL+V N RT ERDI+ F YG V+ + +N FV+++ + +A A R+K
Sbjct: 6 TLYVGNISS-RTTERDIRDEFSEYGRVIRCYMPPGKNICFVEYDRERDAEDAHRGMSRAK 64
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
+ ++VE+A K D R SPR+ GR + SP+ R
Sbjct: 65 IGGVSVTVEWA-KAGPRSDSR--SPRKDRRGRSGSRDKKESPSKR 106
>gi|123976178|ref|XP_001314467.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121896817|gb|EAY01957.1| hypothetical protein TVAG_430980 [Trichomonas vaginalis G3]
Length = 199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
++ T T+ V N T E +K F +GNV+ RI ++F FV+F T+E+
Sbjct: 30 SKSSTVTIHVGNL-SFDTTEESLKAKFAEFGNVVTCRIPRRTRTGKSKSFGFVEFSTKED 88
Query: 55 ATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRG 94
A KA++ + + R + +E + + D PRRG
Sbjct: 89 ADKAIKEMNEKEFEGRTLKIEIS-------NGLSDKPRRG 121
>gi|303310709|ref|XP_003065366.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240105028|gb|EER23221.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 864
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG + + I+ + FVQF ALE+
Sbjct: 403 PGSRLFVGNLPSERVTKRDLFHLFHKYGKLAQISIKPAYGFVQFMDATSCRNALEAEQGG 462
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY------G 119
+ R I +E + P+R R++P PS RR SPDY G
Sbjct: 463 VIRGRKIHLEIS------------KPQRS--SRNAPEPSKPS-GLRRSRSPDYSRNRDVG 507
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGR 144
RG +RY+ D++ S + GR
Sbjct: 508 RGGRLGSERYDRVAGDRKSSVNEGR 532
>gi|449274709|gb|EMC83787.1| Splicing factor, arginine/serine-rich 4, partial [Columba livia]
Length = 257
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
R RERD+++ F+ YG + + ++ F FV+FE +A A+ + +L D +++E+
Sbjct: 14 RARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEH 71
>gi|346322984|gb|EGX92582.1| transformer-SR ribonucleoprotein, putative [Cordyceps militaris
CM01]
Length = 375
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ + FE YG V +I R F FV+ T E+A
Sbjct: 68 PGSNLFVTGIHP-RLSEAEVTKMFEKYGEVEKCQIMKDPHSKESRGFGFVKMVTPEQAEA 126
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 127 AREGLQGEVIEGRTLSIEKA 146
>gi|41053419|ref|NP_956615.1| RNA-binding protein 28 [Danio rerio]
gi|30353878|gb|AAH51781.1| Zgc:56258 [Danio rerio]
Length = 864
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K+ +I + E D+K+ F +G VL +I +R FAFV F+ EA KAL
Sbjct: 235 KSRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALT 294
Query: 61 STDRSKLVDRVISVEYALKDD 81
+ + K+ DR ++V++A+ D
Sbjct: 295 AMNGKKIKDRQVAVDWAIAKD 315
Score = 39.7 bits (91), Expect = 0.49, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEAT 56
++ + +I + + ++K+ F +G VL RI ++ FAFVQF+ EA
Sbjct: 119 KKKENSWLIIRNLSFKCEDDELKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAE 178
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERD 85
KA + +R + DR + V++ + D
Sbjct: 179 KARAAMNRKAIRDRPVEVDWTTSNTESAD 207
>gi|156084440|ref|XP_001609703.1| RNA-binding protein P22H7.02c [Babesia bovis T2Bo]
gi|154796955|gb|EDO06135.1| RNA-binding protein P22H7.02c, putative [Babesia bovis]
Length = 702
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATK 57
+ T + V N + ++D+ + F YGNV VRI R FAFV++ +++E+ +
Sbjct: 615 KATSKIIVKNL-AFQATKQDLYKLFSFYGNVKSVRIPKSLKSNNRGFAFVEYSSKQESAR 673
Query: 58 ALESTDRSKLVDRVISVEYALKDDS 82
A+ES S L R + +E+A +D++
Sbjct: 674 AVESLQHSHLYGRHLVLEFAEEDEN 698
>gi|94733636|emb|CAK04114.1| novel protein (zgc:56258) [Danio rerio]
Length = 865
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K+ +I + E D+K+ F +G VL +I +R FAFV F+ EA KAL
Sbjct: 235 KSRLIIRNLSFKCEEDDLKQIFSEFGTVLEAKIPLKPDGKKRGFAFVLFKRMPEAGKALT 294
Query: 61 STDRSKLVDRVISVEYALKDD 81
+ + K+ DR ++V++A+ D
Sbjct: 295 AMNGKKIKDRQVAVDWAIAKD 315
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ + ++K+ F +G VL RI ++ FAFVQF+ EA KA + +R + DR
Sbjct: 134 KCEDDELKQIFSKFGTVLETRIPLKPDGKKKGFAFVQFKCVSEAEKARAAMNRKAIRDRP 193
Query: 72 ISVEYALKDDSERD 85
+ V++ + D
Sbjct: 194 VEVDWTTSNTESAD 207
>gi|392862596|gb|EAS36749.2| RNA-binding protein [Coccidioides immitis RS]
Length = 870
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG + + I+ + FVQF ALE+
Sbjct: 403 PGSRLFVGNLPSERVTKRDLFHLFHKYGKLAQISIKPAYGFVQFMDATSCRNALEAEQGG 462
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY------G 119
+ R I + + D P+R R++P PS RR SPDY G
Sbjct: 463 VIRGRKIRLLTTV------DLEISKPQRS--SRNAPEPSKPS-GLRRSRSPDYSRNRDVG 513
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGR 144
RG +RY+ D++ S + GR
Sbjct: 514 RGGRLGSERYDRVAGDRKSSVNEGR 538
>gi|296422908|ref|XP_002841000.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637228|emb|CAZ85191.1| unnamed protein product [Tuber melanosporum]
Length = 332
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 35/84 (41%), Gaps = 9/84 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQE 53
+Q P LFV P R E D+ R F YG V H + R F FV+ T +
Sbjct: 88 GSQNPGTNLFVTGIHP-RLTEDDVTRLFAKYGEVEKCQIMLDPHTKESRGFGFVKLATLD 146
Query: 54 EATKALESTDRSKLVDRVISVEYA 77
+A A E R +S+E A
Sbjct: 147 QADSAKEHLQGEVFEGRTLSIEKA 170
>gi|320034780|gb|EFW16723.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 870
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 61/145 (42%), Gaps = 15/145 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG + + I+ + FVQF ALE+
Sbjct: 403 PGSRLFVGNLPSERVTKRDLFHLFHKYGKLAQISIKPAYGFVQFMDATSCRNALEAEQGG 462
Query: 66 KLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY------G 119
+ R I + + D P+R R++P PS RR SPDY G
Sbjct: 463 VIRGRKIRLLTTV------DLEISKPQRS--SRNAPEPSKPS-GLRRSRSPDYSRNRDVG 513
Query: 120 RGRSPAYDRYNGPVYDQRRSPDHGR 144
RG +RY+ D++ S + GR
Sbjct: 514 RGGRLGSERYDRVAGDRKSSVNEGR 538
>gi|378733184|gb|EHY59643.1| hypothetical protein HMPREF1120_07628 [Exophiala dermatitidis
NIH/UT8656]
Length = 296
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P R E D+ R FE YG V H + R F FV+ T E+A A E
Sbjct: 69 NLFVTGIHP-RLTEADVTRLFEKYGEVESCSIMLDPHTKESRGFGFVKMVTPEQAEAARE 127
Query: 61 STDRSKLVDRVISVEYA 77
+ R +S+E A
Sbjct: 128 GLQGEVIEGRTLSIEKA 144
>gi|327285770|ref|XP_003227605.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 10-like [Anolis carolinensis]
Length = 262
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNV-ADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
A + DR + R I +++A D
Sbjct: 67 AFHNLDRKWICGRQIEIQFAQGD 89
>gi|310772202|ref|NP_001006476.2| serine/arginine-rich splicing factor 5a [Gallus gallus]
gi|326920574|ref|XP_003206544.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 278
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
R RERD+++ F+ YG + + ++ F FV+FE +A A+ + +L D +++E+
Sbjct: 14 RARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEH 71
>gi|145515315|ref|XP_001443557.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410946|emb|CAK76160.1| unnamed protein product [Paramecium tetraurelia]
Length = 186
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 10 LFVINFDPIR-TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS--- 65
LFV + + T ERD++ F YG++ V + +++F+ F ++EA +AL + +
Sbjct: 9 LFVAGYSRSKVTDERDVREIFRKYGSLKEVAYKGSYSFITFSNEDEAKEALTEMNGTTHN 68
Query: 66 --KL-VDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP 106
KL VD V + + +E D+ + R G + R P GRSP
Sbjct: 69 GQKLKVDVVDNRKGRRTGPNESDECFKCGRGGHWARDCPKGRSP 112
>gi|426232112|ref|XP_004010078.1| PREDICTED: uncharacterized protein LOC101116481 [Ovis aries]
Length = 233
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|345491212|ref|XP_001603815.2| PREDICTED: serine-arginine protein 55-like isoform 2 [Nasonia
vitripennis]
Length = 364
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
R RERD+++ F YG + V ++ FAFV+F+ +A A+ + +L+ I+VE A
Sbjct: 13 RVRERDLEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERITVERAR 72
Query: 79 KDDSERDDRYDSPRRGGYG 97
D RGGYG
Sbjct: 73 GTPRGSDQWRYGDSRGGYG 91
>gi|410170863|ref|XP_003960064.1| PREDICTED: serine/arginine-rich splicing factor 10-like [Homo
sapiens]
Length = 146
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|354543025|emb|CCE39743.1| hypothetical protein CPAR2_601630 [Candida parapsilosis]
Length = 847
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N ++D+ R F YG V+ + I+ + FVQF T E + ++ + +
Sbjct: 349 LFVGNLPANTVSKQDLFRIFNKYGEVIQIAIKAGYGFVQFRTGEACLECVKGETDVPIHN 408
Query: 70 RVISVEYALKDDSERDD--RYDSPRRGGYGRHSPYGRSPSPAYRR 112
+V+ ++ + S R ++P GR P P P R+
Sbjct: 409 KVLRLDASKPQKSRRPGHPEVNNPNLSSRGRERPNAEEPVPKRRK 453
>gi|296005552|ref|XP_002809092.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|225632040|emb|CAX64373.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
Length = 414
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATK 57
+P T+FV + P ++D+KRHF YGN+L I+ R + F+ FE Q+ A
Sbjct: 229 KPGCTIFVF-YLPNDWSDKDLKRHFSHYGNILGATIKRETNGKSRGYGFINFENQQSAIN 287
Query: 58 AL 59
A+
Sbjct: 288 AV 289
>gi|449502441|ref|XP_002200515.2| PREDICTED: serine/arginine-rich splicing factor 4-like
[Taeniopygia guttata]
Length = 277
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
R RERD+++ F+ YG + + ++ F FV+FE +A A+ + +L D +++E+
Sbjct: 14 RARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEH 71
>gi|147903707|ref|NP_001088237.1| serine/arginine-rich splicing factor 12 [Xenopus laevis]
gi|54038377|gb|AAH84231.1| LOC495068 protein [Xenopus laevis]
Length = 251
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA++QFE +A
Sbjct: 8 PNTSLFVRNVGDA-TRPEDLRREFGRYGPIVDVYVPLDFYNRRPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|47227948|emb|CAF97577.1| unnamed protein product [Tetraodon nigroviridis]
Length = 395
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---RRNFAFVQFETQEEATKALEST 62
P TLFV N P R +E +K F+ V I +R FAFV+F T +A KA++ST
Sbjct: 60 PKTTLFVSNL-PYRVKEATLKSVFKKAVRVALPEIDGRKRGFAFVEFATVADAEKAMKST 118
Query: 63 DRSKLVDRVISVEYALKDDSE 83
+ K+ R I E+ K S+
Sbjct: 119 ENMKIRKRDIRAEFCQKQKSD 139
>gi|356554642|ref|XP_003545653.1| PREDICTED: probable RNA-binding protein 19-like [Glycine max]
Length = 824
Score = 45.1 bits (105), Expect = 0.012, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 22 ERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75
E+D++R F P+G + +R+ R FAFV++ TQ+EA A E+ + L R + +E
Sbjct: 711 EKDLRRLFSPFGQIKSLRLPMKFGSHRGFAFVEYVTQQEAKNAREALASTHLYGRHLLIE 770
Query: 76 YALKDDSERDDR 87
+A +D++ + R
Sbjct: 771 HAKEDETLEELR 782
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ TLF+ N T E I+ F YGNV V + + F +V F +QEEAT
Sbjct: 333 PSNTLFIGNLSFDCTNET-IQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQEEATA 391
Query: 58 ALESTDRSKLVDRVISVEYA 77
ALE+ + R + V++A
Sbjct: 392 ALEALHGQDVAGRPLRVDFA 411
>gi|146179448|ref|XP_001020597.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila]
gi|146144570|gb|EAS00352.2| hypothetical protein TTHERM_00219250 [Tetrahymena thermophila
SB210]
Length = 256
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNV--LHVRIRRNFAFVQFETQEEATKALESTDRSK 66
T+FV R RE D++ F YG + + R +R FAF+++ + +A +A+E D +
Sbjct: 12 TIFVGKLSS-RVREEDLRDEFRRYGRIRDIDFRRQRGFAFIEYSSSSDAKQAVEDMDGQR 70
Query: 67 LVDRVISVEYALKDDSERDDR--------YDSPRRGGYGRHSPYGRSPSPAYR 111
D I V+Y ++ S+R+ R Y+ R+G + G + YR
Sbjct: 71 FEDTRIVVQYK-ENRSDRNRRGPSTADVCYNCGRKGHWANECKEGNWNNRCYR 122
>gi|449329151|gb|AGE95425.1| arginine/serine rich pre-mRNA splicing factor [Encephalitozoon
cuniculi]
Length = 301
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVE 75
P E IK +F +G V V ++ + F+ F+++ T+ L R+ +D ISVE
Sbjct: 9 PNHVSEEQIKEYFGQFGEVTDVSLKGTYGFLNFDSEGSITRVL--NQRTHSIDGAPISVE 66
Query: 76 YALK----DDSERDDRYDSPRRGGYG--------RHSPY------GRSPSPAYRRRPSPD 117
A D E DRY RGGY R++PY RSP Y R S
Sbjct: 67 RANGRKRPLDGEYHDRYMDMGRGGYSPHRDYRGFRNAPYPPMRYESRSPG-RYDPRFSDR 125
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPD 159
YG GRSP Y + + D +RS D + + P++ R D
Sbjct: 126 YG-GRSPEYRGDSFRMGDPQRSRDFCEYCNACPIHGMRDMMD 166
>gi|340370676|ref|XP_003383872.1| PREDICTED: hypothetical protein LOC100640864 [Amphimedon
queenslandica]
Length = 386
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL-- 67
+F+ N + + I+ F YG +L V + +++ FVQFET++ A KA+ ++ +L
Sbjct: 34 IFIGNLKTNKVTRKSIENRFSKYGKILGVSLHKSYGFVQFETRDIARKAVNEENKQELHG 93
Query: 68 --VDRVISVE 75
+D I+ E
Sbjct: 94 VKMDICIATE 103
>gi|56270156|gb|AAH87121.1| Splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHA 70
>gi|74226809|dbj|BAE27050.1| unnamed protein product [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHA 70
>gi|194374487|dbj|BAG57139.1| unnamed protein product [Homo sapiens]
Length = 158
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA- 70
Query: 79 KDDSERDDRYDSPRRG 94
RD Y S R G
Sbjct: 71 -RGPRRDGSYGSGRSG 85
>gi|66911687|gb|AAH97003.1| Sfrs5b protein [Danio rerio]
Length = 164
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLNP-SAREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|224967104|ref|NP_080775.3| arginine/serine-rich splicing factor 6 [Mus musculus]
gi|306922366|ref|NP_001014207.2| splicing factor, arginine/serine-rich 6 [Rattus norvegicus]
gi|74197209|dbj|BAE35148.1| unnamed protein product [Mus musculus]
gi|74228832|dbj|BAE21902.1| unnamed protein product [Mus musculus]
gi|148674361|gb|EDL06308.1| splicing factor, arginine/serine-rich 6 [Mus musculus]
gi|149043026|gb|EDL96600.1| similar to dJ862K6.2.2 (splicing factor, arginine/serine-rich 6
(SRP55-2)(isoform 2)), isoform CRA_a [Rattus
norvegicus]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHA 70
>gi|12836310|dbj|BAB23599.1| unnamed protein product [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHA 70
>gi|19173684|ref|NP_597487.1| ARGININE/SERINE RICH PRE-mRNA SPLICING FACTOR [Encephalitozoon
cuniculi GB-M1]
gi|74697561|sp|Q8SRU2.1|SFR_ENCCU RecName: Full=Probable splicing factor ECU05_1440; AltName:
Full=Pre-mRNA-splicing factor ECU05_1440
gi|19170890|emb|CAD26664.1| ARGININE/SERINE RICH PRE-mRNA SPLICING FACTOR [Encephalitozoon
cuniculi GB-M1]
Length = 301
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 23/162 (14%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRV-ISVE 75
P E IK +F +G V V ++ + F+ F+++ T+ L R+ +D ISVE
Sbjct: 9 PNHVSEEQIKEYFGQFGEVTDVSLKGTYGFLNFDSEGSITRVL--NQRTHSIDGAPISVE 66
Query: 76 YALK----DDSERDDRYDSPRRGGYG--------RHSPY------GRSPSPAYRRRPSPD 117
A D E DRY RGGY R++PY RSP Y R S
Sbjct: 67 RANGRKRPLDGEYHDRYMDMGRGGYSPHRDYRGFRNAPYPPMRYESRSPG-RYDPRFSDR 125
Query: 118 YGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPD 159
YG GRSP Y + + D +RS D + + P++ R D
Sbjct: 126 YG-GRSPEYRGDSFRMGDPQRSRDFCEYCNACPIHGMRDMMD 166
>gi|171693991|ref|XP_001911920.1| hypothetical protein [Podospora anserina S mat+]
gi|170946944|emb|CAP73748.1| unnamed protein product [Podospora anserina S mat+]
Length = 342
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P LFV P R E ++ R FE YG V +I R F FV+ T E A
Sbjct: 70 PGSNLFVTGIHP-RLEEAEVTRLFEKYGEVEKCQIMKDPQTGESRGFGFVKMVTSEMAEA 128
Query: 58 ALESTDRSKLVDRVISVEYA 77
A++ + R +S+E A
Sbjct: 129 AIDGLRGEVIEGRTLSIEKA 148
>gi|254564703|ref|XP_002489462.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|238029258|emb|CAY67181.1| Protein of unknown function, localizes to the nucleolus and
nucleoplasm [Komagataella pastoris GS115]
gi|328349891|emb|CCA36291.1| Uncharacterized RNA-binding protein C660.15 [Komagataella pastoris
CBS 7435]
Length = 385
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 10/98 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T+E D++ HF+ GN++ +R+ + FAF+ F E AT
Sbjct: 207 PSRILFVGNLSFDTTKE-DLEEHFQHCGNIVKIRMATFEDSGKCKGFAFIDFLDVEGATN 265
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
AL ++V R + +EY +D S+R + P G
Sbjct: 266 ALNDKLCKRMVGRPLRMEYG-EDRSKRSPAFRKPVEEG 302
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ L V P +T ERD+K F +G + HV + + F FV FE +E+A +
Sbjct: 111 PSNVLGVFGLAP-QTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENKEDAVR 169
Query: 58 ALESTDRSKLVDRVISVEYAL 78
A E +L + I +++
Sbjct: 170 AKEECQDLQLHGKSIRTDFSA 190
>gi|432880368|ref|XP_004073663.1| PREDICTED: ras GTPase-activating protein-binding protein 1-like
[Oryzias latipes]
Length = 480
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 58/133 (43%), Gaps = 11/133 (8%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-----NFAFVQFETQEEATKALESTDR 64
LFV N P + ++K FE YG VL +RI NF FV F+ E K L +
Sbjct: 347 LFVGNV-PHDVDKNELKEFFEQYGAVLELRINSGGKLPNFGFVVFDDSEPVQKILNNKPI 405
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP-SPAYR----RRPSPDYG 119
D ++VE + DR DS RG G G P P R ++PS G
Sbjct: 406 KFRGDIRLNVEEKKTRSAREGDRRDSRPRGPGGPRERVGGGPRGPPTRGGMSQKPSFGSG 465
Query: 120 RGRSPAYDRYNGP 132
RG P+ R++ P
Sbjct: 466 RGAGPSESRFSAP 478
>gi|67537678|ref|XP_662613.1| hypothetical protein AN5009.2 [Aspergillus nidulans FGSC A4]
gi|40741897|gb|EAA61087.1| hypothetical protein AN5009.2 [Aspergillus nidulans FGSC A4]
gi|259482115|tpe|CBF76287.1| TPA: RNA-binding protein (Nab3), putative (AFU_orthologue;
AFUA_3G09770) [Aspergillus nidulans FGSC A4]
Length = 888
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 49/112 (43%), Gaps = 12/112 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF +ALE + +
Sbjct: 415 LFVGNLPTERVTKRDLFHIFHSYGKLAQISIKQAYGFIQFLEASSCKRALEGEQGAIVRG 474
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
R + +E + P+R +P S + RR SPDYGRG
Sbjct: 475 RKVHLEIS------------KPQRNTRPAPAPSEPSRVTSARRSRSPDYGRG 514
>gi|41055454|ref|NP_956710.1| transformer-2 protein homolog alpha [Danio rerio]
gi|32451924|gb|AAH54632.1| Transformer-2 alpha [Danio rerio]
Length = 297
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG++ V + R FAFV FE +
Sbjct: 129 ANPDPNTCLGVFGL-SLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHID 187
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A+E + +L R I V+Y++
Sbjct: 188 DAKEAMERANGMELDGRRIRVDYSI 212
>gi|218200049|gb|EEC82476.1| hypothetical protein OsI_26921 [Oryza sativa Indica Group]
Length = 271
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ + I R FAFV+++ ++EA
Sbjct: 13 RDTYSLLVLNIT-FRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDRLDGRVVDGREIMVQFA 92
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ TLF+ N T + I+ F YGN+ V + + F +V F +QEEAT
Sbjct: 335 PSNTLFLGNLSFDCTNDS-IQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATA 393
Query: 58 ALESTDRSKLVDRVISVEYA 77
AL++ + + R I ++YA
Sbjct: 394 ALDALNGQDIAGRNIRIDYA 413
>gi|361067831|gb|AEW08227.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|361067833|gb|AEW08228.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|383127576|gb|AFG44442.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|383127578|gb|AFG44443.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|383127580|gb|AFG44444.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|383127584|gb|AFG44446.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
gi|383127586|gb|AFG44447.1| Pinus taeda anonymous locus 2_3502_02 genomic sequence
Length = 90
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 47/87 (54%), Gaps = 16/87 (18%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRP---SPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSP 148
RRG YG RS SP Y RR SPDYGR SP Y R +R SPD+GR SP
Sbjct: 4 RRGSYGSRD---RSASPLYSRRALRDSPDYGRAPSPIYARR-----PERSSPDYGRAASP 55
Query: 149 VPVYDRR---RSPDYGRNRSPNFGRYR 172
+ Y RR SPDYGR SP RYR
Sbjct: 56 I--YARRPQRDSPDYGRVVSPVHERYR 80
>gi|315054267|ref|XP_003176508.1| hypothetical protein MGYG_00597 [Arthroderma gypseum CBS 118893]
gi|311338354|gb|EFQ97556.1| hypothetical protein MGYG_00597 [Arthroderma gypseum CBS 118893]
Length = 922
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N R +RD+ F +G + + I++ + F+QF + KAL++ S +
Sbjct: 438 LFIGNLPTERVTKRDLFHIFHMHGKLAQISIKQAYGFIQFLEPDSCRKALQAQQGSTIRG 497
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + +R R P GR RSP R P P GR + Y+R
Sbjct: 498 RKIHLEIS---KPQRGARNSGPTESS-GRTQRRSRSPEYERNREPPPRAGRAAADRYERG 553
Query: 130 NG 131
G
Sbjct: 554 PG 555
>gi|432864638|ref|XP_004070386.1| PREDICTED: uncharacterized protein LOC101162527 isoform 2
[Oryzias latipes]
Length = 373
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHA 70
>gi|432864636|ref|XP_004070385.1| PREDICTED: uncharacterized protein LOC101162527 isoform 1
[Oryzias latipes]
Length = 367
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGKLLEVDMKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHA 70
>gi|15080592|gb|AAH12039.1| Splicing factor, arginine/serine-rich 6 [Mus musculus]
Length = 339
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNSKELCGERVIVEHA 70
>gi|115473447|ref|NP_001060322.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|33146621|dbj|BAC79909.1| putative splicing factor, arginine/serine-rich 2 (Splicing factor
SC35) [Oryza sativa Japonica Group]
gi|113611858|dbj|BAF22236.1| Os07g0623300 [Oryza sativa Japonica Group]
gi|215687327|dbj|BAG91873.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637485|gb|EEE67617.1| hypothetical protein OsJ_25178 [Oryza sativa Japonica Group]
Length = 275
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ + I R FAFV+++ ++EA
Sbjct: 13 RDTYSLLVLNIT-FRTTADDLSPLFEKYGEVVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDRLDGRVVDGREIMVQFA 92
>gi|395856660|ref|XP_003800739.1| PREDICTED: RNA-binding protein 47 [Otolemur garnettii]
Length = 591
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ S +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNSLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|53130660|emb|CAG31659.1| hypothetical protein RCJMB04_9e4 [Gallus gallus]
Length = 165
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
R RERD+++ F+ YG + + ++ F FV+FE +A A+ + +L D +++E+
Sbjct: 14 RARERDVEKFFKGYGRIREIHLKNGFGFVEFEDHRDADDAIYELNGKELCDERVTIEH 71
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALEST 62
LF+ N D E+ +K F PYGN+ VR+ R F FV F T EEATKA+
Sbjct: 326 LFIKNLDDSIDDEK-LKEEFAPYGNITSVRVMRTENGKSRGFGFVCFSTPEEATKAITEK 384
Query: 63 DRSKLVDRVISVEYALKDDSER 84
++ + + + V A + D R
Sbjct: 385 NQQIVAGKPLYVAIAQRKDVRR 406
>gi|325303454|tpg|DAA34558.1| TPA_exp: RNA-binding protein LARK [Amblyomma variegatum]
Length = 217
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 6 PTKTLFVINF-DPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
P LFV + D +RT E ++ F YG V + + FV T+E+A +AL++ +
Sbjct: 3 PRTKLFVGHLPDGLRTEE--LQELFAKYGTVTECDVINKYGFVHMATEEQAEEALKNLNN 60
Query: 65 SKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRS 105
+ +SVE + S+ +P R G PYG+
Sbjct: 61 YNFMGSTLSVE---RSTSKFHQEPGAPGRAKGGPRPPYGQG 98
>gi|328874752|gb|EGG23117.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 304
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 1 MANQRP-TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFET 51
+AN P ++ L V +P RT E D+ + F YG + V + R+ +AF+ F+
Sbjct: 104 LANTAPPSRVLGVFGLNP-RTTESDLDQVFSKYGKLEKVNLIRDRQTRSSRCYAFIYFDN 162
Query: 52 QEEATKALESTDRSKLVDRVISVEYA 77
+E+A A E + +L RVI ++Y+
Sbjct: 163 KEDAVSAKEGSLSLELDGRVIRIDYS 188
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 12/79 (15%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRNF-------AFVQFETQEEAT 56
P TLF+ +N+D T ER +KR E YG +L++RI ++F AFV+F+ ++
Sbjct: 101 PYNTLFIARLNYD---TTERTLKRELEVYGKILNLRIVKDFQGESRGYAFVEFDNEDSLK 157
Query: 57 KALESTDRSKLVDRVISVE 75
+A +S ++ + + V+
Sbjct: 158 EAYKSFNKKSIDGWKVLVD 176
>gi|321479086|gb|EFX90042.1| transformer-2 protein-like protein [Daphnia pulex]
Length = 259
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 57/134 (42%), Gaps = 32/134 (23%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
N PT+ L V + T E +++ F YG + V++ R FAFV FE+ E+
Sbjct: 112 NPEPTRCLGVFGMG-LYTTETELQHVFAKYGPLEKVQVVKDAKTGRSRGFAFVYFESLED 170
Query: 55 ATKALESTDRSKLVDRVISVEYALKD----------------DSERDDRYDSPRRGGYGR 98
A A E ++ R I V+Y++ S R D+YD RG
Sbjct: 171 AKLAKEQCTGLEIDGRRIRVDYSITQRPHTPTPGIYMGRPTITSGRYDKYDRNERG---- 226
Query: 99 HSPYGRSPSPAYRR 112
Y RSPSP Y +
Sbjct: 227 ---YRRSPSPYYEK 237
>gi|213410497|ref|XP_002176018.1| predicted protein [Schizosaccharomyces japonicus yFS275]
gi|212004065|gb|EEB09725.1| predicted protein [Schizosaccharomyces japonicus yFS275]
Length = 198
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEA 55
N RP TL V F T E + + FE +G ++ I R +AFV+FE + +A
Sbjct: 7 NYRPGFTLHVRGFSESMTAEA-LGQEFEKFGRIVRCDIPVFRTPATRRYAFVEFEERRDA 65
Query: 56 TKALESTDRSKLVDRVISVEYA-LKDDSERDDRYDSPRRG 94
A R++L D ++ VE+A L+D +R DR+ RG
Sbjct: 66 EAAHSRMHRTRLNDDILHVEWARLRDRFDRGDRFQQRPRG 105
>gi|121705426|ref|XP_001270976.1| RNA-binding protein (Nab3), putative [Aspergillus clavatus NRRL 1]
gi|119399122|gb|EAW09550.1| RNA-binding protein (Nab3), putative [Aspergillus clavatus NRRL 1]
Length = 898
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 22/151 (14%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF AL+ + +
Sbjct: 421 LFVGNLPTERVTKRDLFHIFHQYGKLAQISIKQAYGFIQFVDASACKHALDCEQGAVIRG 480
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRY 129
R I +E + P+R +P PA RR SP+Y RG P+
Sbjct: 481 RKIHLEIS------------KPQRNTRAGPAP------PAPRRSRSPEYSRGGPPSSRNP 522
Query: 130 NGPVYDQRRSPDHGRHRSPVPVYDRRRSPDY 160
GP R D GR VP D R P +
Sbjct: 523 RGPGDRYERPYDSGR----VPFSDFRDEPTH 549
>gi|255537535|ref|XP_002509834.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
gi|223549733|gb|EEF51221.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
Length = 204
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R D++++F G VL + R FAFV ET E+A +
Sbjct: 45 PGNNLYVTGLS-TRVTTGDLEKYFGKEGKVLECHLVTDPRTRESRGFAFVTMETLEDAER 103
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ +RS L R+I+VE A
Sbjct: 104 CVKYLNRSVLEGRLITVEKA 123
>gi|196015807|ref|XP_002117759.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
gi|190579644|gb|EDV19735.1| hypothetical protein TRIADDRAFT_61835 [Trichoplax adhaerens]
Length = 741
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 21 RERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
RERD+K F +GNV+ V I + FAF+QFE A A++ + +++++R IS+++AL
Sbjct: 218 RERDLKEIFSQFGNVITVNIPPKGGFAFIQFENVFHAANAIKELNMTEVMNRRISLDWAL 277
>gi|1049088|gb|AAA93073.1| SRp55-1 [Homo sapiens]
Length = 344
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHA 70
>gi|409081762|gb|EKM82121.1| hypothetical protein AGABI1DRAFT_112242 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426198598|gb|EKV48524.1| hypothetical protein AGABI2DRAFT_192114 [Agaricus bisporus var.
bisporus H97]
Length = 275
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ L V IRT ERD+ F +G V V I R F F++ T +EA +
Sbjct: 80 PSSVLGVFGLS-IRTVERDLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVDEAAR 138
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
++ + +L R I V+Y++ D
Sbjct: 139 CIQELNGVELNGRRIRVDYSVTD 161
>gi|389748594|gb|EIM89771.1| hypothetical protein STEHIDRAFT_128672 [Stereum hirsutum FP-91666
SS1]
Length = 276
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R D+ + FE YG ++ R+ F FV+FE+ +A AL + + + VE+
Sbjct: 11 PTDARTDDVSKFFEGYGKIVDCRVMTGFGFVEFESSRDAEDALNHFNGKPFMGTNLVVEF 70
Query: 77 ALKDDSERDDRYDSPRRGGYGRHSPYGRSP 106
A + PRR Y +P R P
Sbjct: 71 A---------KESRPRRDPYDDRAPRARRP 91
>gi|158255842|dbj|BAF83892.1| unnamed protein product [Homo sapiens]
Length = 344
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|395512885|ref|XP_003760664.1| PREDICTED: scaffold attachment factor B2 [Sarcophilus harrisii]
Length = 946
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKAL 59
+ L+V TR D+K F YG V+ ++ N + FV T +EATK +
Sbjct: 416 RNLWVSGLSST-TRATDLKNLFSKYGKVVGAKVVTNARSPGARCYGFVTMSTSDEATKCI 474
Query: 60 ESTDRSKLVDRVISVEYA 77
R++L R+ISVE A
Sbjct: 475 NHLHRTELHGRMISVEKA 492
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79
TRERD+++ F+ YG + V ++ + FV+FE +A A++ D + + VE+A
Sbjct: 17 TRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARS 76
Query: 80 DDSERDDRY 88
+R+ RY
Sbjct: 77 PREKRNSRY 85
>gi|440297375|gb|ELP90069.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 283
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 24/109 (22%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIR------RNFAFVQFETQEEATKALESTD 63
L+V N T+E D+++ F +GN+ ++ + F FV++ET+++A KAL + +
Sbjct: 4 LYVCNL-SYSTKESDLEKFFASFGNIKSCKLMISRGYSKGFGFVEYETEDDAKKAL-AAN 61
Query: 64 RSKLVDRVISVEYA---------------LKDDSERDDRYDSPRR-GGY 96
++ + R + ++ A D+ RD+R +PRR GGY
Sbjct: 62 ETEFMGRKLRIDIARPPRERHESAQQGSQEGDNERRDERSGAPRRYGGY 110
>gi|393245975|gb|EJD53484.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 288
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
N P+ L V IRT ERD+ F YG V V I R F F++ T E+
Sbjct: 82 NPNPSSVLGVFGLS-IRTTERDLDEEFARYGAVEKVTIVYDQRSDRSRGFGFIRMATVED 140
Query: 55 ATKALESTDRSKLVDRVISVEYALKD 80
A + ++ + +L R I V++++ D
Sbjct: 141 AQRCIDKLNGIELNGRRIRVDFSVTD 166
>gi|402882500|ref|XP_003904778.1| PREDICTED: serine/arginine-rich splicing factor 6 [Papio anubis]
gi|380815566|gb|AFE79657.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|380815568|gb|AFE79658.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420733|gb|AFH33580.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|383420735|gb|AFH33581.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948770|gb|AFI37990.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
gi|384948772|gb|AFI37991.1| serine/arginine-rich splicing factor 6 [Macaca mulatta]
Length = 343
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|291404036|ref|XP_002718366.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPIDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + I +++A D
Sbjct: 67 ALHNLDRKWICGHQIEIQFAQGD 89
>gi|390462611|ref|XP_003732879.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Callithrix jacchus]
Length = 344
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|208973274|ref|NP_001129183.1| 35 kDa SR repressor protein [Rattus norvegicus]
Length = 261
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V I R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVADA-TRPEDLRREFGRYGPIVDVYIPLDFYSRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|403290688|ref|XP_003936440.1| PREDICTED: serine/arginine-rich splicing factor 6 [Saimiri
boliviensis boliviensis]
Length = 344
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 13/80 (16%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEA 55
P KTLFV +++D +E+D++R F +G + +R+ R+ +AF+ FE +++
Sbjct: 98 PYKTLFVSRLSYD---VKEQDLEREFGRFGPIDRIRLVRDKESKKPRGYAFILFEREKDM 154
Query: 56 TKALESTDRSKLVDRVISVE 75
A + TD ++ DR ISV+
Sbjct: 155 KAAFKETDGMRIKDRRISVD 174
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P +L V N P+ R D++ FE YG + V I R+ F FV+F+ +A
Sbjct: 15 PRVSLVVRNL-PLDIRAEDLRSKFEKYGELKDVYIPRDYYTQRPRGFGFVEFKDTRDAED 73
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+ S DRS + R ISV ++
Sbjct: 74 AMYSLDRSTINGREISVTFS 93
>gi|296084065|emb|CBI24453.3| unnamed protein product [Vitis vinifera]
Length = 260
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ER ++ HF G V RI R FAFV ET E+A +
Sbjct: 89 PGNTLYVTGLS-TRVTERALEDHFSREGKVASCFLVMEPRTRISRGFAFVTMETVEDANR 147
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 148 CIKHLNQSVLEGRYITVE 165
>gi|300706781|ref|XP_002995630.1| hypothetical protein NCER_101418 [Nosema ceranae BRL01]
gi|239604808|gb|EEQ81959.1| hypothetical protein NCER_101418 [Nosema ceranae BRL01]
Length = 379
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 66/164 (40%), Gaps = 34/164 (20%)
Query: 25 IKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVIS----------- 73
I +F+ YG + + +AFV+F+ +A L + D RV+
Sbjct: 17 IYNYFKAYGEIDSYNFKGQYAFVEFKNDRDAENILNTRDIEINGHRVVVEASNSKGKFQG 76
Query: 74 ----VEYALKDDSERDDR----YDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPA 125
E+ SER D Y S RR SP Y R SP Y RSP
Sbjct: 77 EHKRQEFHFNSLSERPDSNNVDYQSSRR-------------SPRYDDRRSPRYDDRRSPR 123
Query: 126 YDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFG 169
YD P YD RR+ +G RS P YD RRSP Y R+ +
Sbjct: 124 YDDRRSPRYDDRRNERYGNRRS--PRYDDRRSPRYDDRRNSQYN 165
>gi|20127499|ref|NP_006266.2| serine/arginine-rich splicing factor 6 [Homo sapiens]
gi|307078161|ref|NP_001182497.1| splicing factor, arginine/serine-rich 6 [Pongo abelii]
gi|332209067|ref|XP_003253632.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Nomascus leucogenys]
gi|397511164|ref|XP_003825949.1| PREDICTED: serine/arginine-rich splicing factor 6 [Pan paniscus]
gi|426391709|ref|XP_004062210.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Gorilla gorilla gorilla]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Pre-mRNA-splicing factor SRP55; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|13905094|gb|AAH06832.1| Splicing factor, arginine/serine-rich 6 [Homo sapiens]
gi|119596370|gb|EAW75964.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
gi|119596373|gb|EAW75967.1| splicing factor, arginine/serine-rich 6, isoform CRA_a [Homo
sapiens]
Length = 344
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|336263150|ref|XP_003346356.1| hypothetical protein SMAC_07833 [Sordaria macrospora k-hell]
gi|380091684|emb|CCC10816.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1756
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
+R G + +P G PS + R+ SP Y RSPAY+ P Y+ RSPD+ +
Sbjct: 1377 QRSGSLQATPRGSPPSASGARQMSPGYENTRSPAYENTRSPAYENARSPDYQQQ------ 1430
Query: 152 YDRRRSPDY 160
Y+ RSPDY
Sbjct: 1431 YENTRSPDY 1439
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+ TLF+ N I+ F YG++ V + + F +V F +Q+EAT
Sbjct: 321 PSNTLFLGNVS-FECSNESIQEVFAEYGSITRVSLPTDRDTGALKGFGYVDFSSQQEATA 379
Query: 58 ALESTDRSKLVDRVISVEYA 77
ALE+ + + R I ++YA
Sbjct: 380 ALEALNGQDIGGRAIRIDYA 399
>gi|1049086|gb|AAA93072.1| SRp55-3, partial [Homo sapiens]
Length = 335
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGEHVIVEHA 70
>gi|74142527|dbj|BAE33848.1| unnamed protein product [Mus musculus]
gi|148681846|gb|EDL13793.1| RNA binding motif protein 28, isoform CRA_b [Mus musculus]
Length = 750
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDS 90
++V++A+ D +D ++ S
Sbjct: 184 VAVDWAVAKDKYKDAQHAS 202
>gi|410915937|ref|XP_003971443.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 2
[Takifugu rubripes]
Length = 598
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
K LFV N T E +++ F YGN+ V+ +++AF+ FE ++ A KALE + +L
Sbjct: 303 KVLFVRNLANSVTEEI-LEKSFSEYGNLERVKKLKDYAFIHFEERDGAVKALEEMNGKEL 361
Query: 68 VDRVISVEYALKDDSERDDR 87
I + +A D +R +R
Sbjct: 362 EGEPIEIVFAKPPDQKRKER 381
>gi|321474203|gb|EFX85168.1| hypothetical protein DAPPUDRAFT_98603 [Daphnia pulex]
Length = 250
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P +FV P+ ++ D++ FE YG + + F FV +++E A +A+ + S
Sbjct: 4 PPTKIFVGRL-PLDAKQEDLRALFEKYGVITECDVLNRFGFVHMKSEEMAKRAIAALHNS 62
Query: 66 KLVDRVISVE 75
+ + I+VE
Sbjct: 63 EFMGSRITVE 72
>gi|301755236|ref|XP_002913467.1| PREDICTED: RNA-binding protein 28-like [Ailuropoda melanoleuca]
gi|281348807|gb|EFB24391.1| hypothetical protein PANDA_001275 [Ailuropoda melanoleuca]
Length = 751
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K +I + E D+K F YG VL V I R FAFVQF+ EA KAL+
Sbjct: 113 KARLIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY 118
S + ++ R ++V++A+ D ++ + S +P +RP P +
Sbjct: 173 SMNMKEIKGRTVAVDWAVAKDKYKNTQSAS----------------APGEEKRPEPKH 214
>gi|213515420|ref|NP_001133374.1| nuclear receptor coactivator 5 [Salmo salar]
gi|209152341|gb|ACI33108.1| Nuclear receptor coactivator 5 [Salmo salar]
Length = 676
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQE--EATKALESTDRSKL 67
+FV N +D++ F PYG + + + + + FVQFE E EA KA ++ K
Sbjct: 31 IFVGNLPTSLMDRKDMEELFSPYGKIHALSMFQGYGFVQFERVEDAEAAKAGQNGRPYKG 90
Query: 68 VDRVISVEYALKDDSERDDRYDSPRR---GGYGRHSPYGRSPSPAYRRRPSPDYGRGRSP 124
I++ + ++ R PRR GGYG GR P P R RSP
Sbjct: 91 YKIAINMAAERQRQNKAQSRPSPPRRDPYGGYGE----GREPRP-----------RSRSP 135
Query: 125 AYDRYNGPVYDQRRSPDHGRHRSPVPVYDRRRSPDYGRNRSPNFGRYR 172
+ R + R S +H R P + R D+ R PNF RYR
Sbjct: 136 MHGRDS---RAHRGSREHSRE----PGREPRHPRDHHEPRDPNFDRYR 176
>gi|166235127|ref|NP_598686.2| RNA-binding protein 28 [Mus musculus]
gi|341942269|sp|Q8CGC6.4|RBM28_MOUSE RecName: Full=RNA-binding protein 28; AltName: Full=RNA-binding
motif protein 28
Length = 750
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDS 90
++V++A+ D +D ++ S
Sbjct: 184 VAVDWAVAKDKYKDAQHAS 202
>gi|2914669|gb|AAC04476.1| SRP0001LB [Homo sapiens]
Length = 192
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRG 94
RD Y S R G
Sbjct: 72 G--PRRDGSYGSGRSG 85
>gi|410215040|gb|JAA04739.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410302392|gb|JAA29796.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
gi|410360346|gb|JAA44682.1| serine/arginine-rich splicing factor 6 [Pan troglodytes]
Length = 344
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|410075471|ref|XP_003955318.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
gi|372461900|emb|CCF56183.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
Length = 381
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
Query: 1 MANQRPTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFE 50
M+ P++ LFV ++FD T + +K+HF+ G ++ +R+ + FAFV F+
Sbjct: 216 MSKNPPSRILFVGNLSFD---TTDEVLKKHFQHCGEIIKIRMATFQDSGKCKGFAFVDFK 272
Query: 51 TQEEATKALESTDRSKLVDRVISVEYA 77
++E AT AL+ ++ R I +EY
Sbjct: 273 SEEGATNALKDKTCRRIASRPIRMEYG 299
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 21/121 (17%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEAT 56
P KT+ V +++D ++ ++R FE +G + VRI R +AF++FE + +
Sbjct: 149 PYKTIIVARLSYD---VTDKKLRREFEEFGPIKRVRIVTDKQGKPRGYAFIEFEHKADMK 205
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERDDRYDS--PRRGGYGRHSPYGRSPSPAYRRRP 114
+A ++ D K+ R + V D ER ++ PRR G G +P GR P P ++RP
Sbjct: 206 EAYKAADGKKIEGRRVLV------DVERGRTVENWKPRRLGGGLGAP-GREPKPPKKQRP 258
Query: 115 S 115
Sbjct: 259 G 259
>gi|30584231|gb|AAP36364.1| Homo sapiens splicing factor, arginine/serine-rich 6 [synthetic
construct]
gi|61371415|gb|AAX43663.1| splicing factor arginine/serine-rich 6 [synthetic construct]
gi|61371422|gb|AAX43664.1| splicing factor arginine/serine-rich 6 [synthetic construct]
Length = 345
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|410915935|ref|XP_003971442.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like isoform 1
[Takifugu rubripes]
Length = 637
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
K LFV N T E +++ F YGN+ V+ +++AF+ FE ++ A KALE + +L
Sbjct: 342 KVLFVRNLANSVTEEI-LEKSFSEYGNLERVKKLKDYAFIHFEERDGAVKALEEMNGKEL 400
Query: 68 VDRVISVEYALKDDSERDDR 87
I + +A D +R +R
Sbjct: 401 EGEPIEIVFAKPPDQKRKER 420
>gi|390480607|ref|XP_003735962.1| PREDICTED: serine/arginine-rich splicing factor 10-like
[Callithrix jacchus]
Length = 123
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V + R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + DR + R I +++A D
Sbjct: 67 ALHNLDRKWICGRQIEIQFAQGD 89
>gi|357122439|ref|XP_003562923.1| PREDICTED: uncharacterized protein LOC100844345 [Brachypodium
distachyon]
Length = 206
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALES 61
F+ N T + +K F +GNV ++ R FAFV F+ +++ A+E
Sbjct: 9 CFIGNL-SWSTTDESLKDAFRKFGNVTEAKVVLDKFSGRSRGFAFVTFDEKKDMEAAIED 67
Query: 62 TDRSKLVDRVISVEYALKDDSERD---DR-YDSPR--RGGYGRHSPYGRSP--------- 106
+ L R I+V+ A + RD DR YD R R GR S GR+P
Sbjct: 68 MNGLDLDGRAITVDKAQPQGAGRDRNGDRDYDRDRGSRNDRGRDSGGGRAPRGSGGGGDC 127
Query: 107 ----SPAYRRRPSPDYGRGRSPAY----DRYNG 131
P + R PD GR Y DRY G
Sbjct: 128 FKCGKPGHFARECPDGDGGRGDRYSGRDDRYGG 160
>gi|115461779|ref|NP_001054489.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|113578040|dbj|BAF16403.1| Os05g0120100 [Oryza sativa Japonica Group]
gi|222630005|gb|EEE62137.1| hypothetical protein OsJ_16924 [Oryza sativa Japonica Group]
Length = 323
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RTR RD++ HF YG + V ++R++AF++F +A +A + D + I VE+A
Sbjct: 21 RTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEARYNLDGRDVDGSRILVEFA 79
>gi|52345470|ref|NP_001004783.1| serine/arginine-rich splicing factor 5 [Xenopus (Silurana)
tropicalis]
gi|49522053|gb|AAH74518.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
gi|89273344|emb|CAJ81460.1| splicing factor, arginine/serine-rich 5 [Xenopus (Silurana)
tropicalis]
Length = 272
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFDDPRDADDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|171679559|ref|XP_001904726.1| hypothetical protein [Podospora anserina S mat+]
gi|170939405|emb|CAP64633.1| unnamed protein product [Podospora anserina S mat+]
Length = 816
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N R ++++ F YG + + ++ + FVQ+ EA ALE+ +L
Sbjct: 356 IFVGNLSSDRVSKKEVFAVFSKYGRLAQISMKSAYGFVQYHNVSEAQAALEACQDMELGG 415
Query: 70 RVISVEYALKDDSE-RDDRYDSP-RRGG 95
R I +E + + + DDR SP RRGG
Sbjct: 416 RRIHLEISRRQKKKGGDDRGHSPDRRGG 443
>gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzias latipes]
Length = 288
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 116 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 174
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 175 DAKEAKEKANGMELDGRRIRVDFSI 199
>gi|393215487|gb|EJD00978.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 247
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
+ N +P+ L V IR+ ERD+ F +G V V I R F F++ +
Sbjct: 27 VQNPQPSNVLGVFGLS-IRSTERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKLASV 85
Query: 53 EEATKALESTDRSKLVDRVISVEYALKD 80
E+A + ++ + +L R I V+Y++ +
Sbjct: 86 EDAARCIQELNGVELNGRRIRVDYSVTE 113
>gi|157822515|ref|NP_001102155.1| splicing factor, arginine/serine-rich 4 [Rattus norvegicus]
gi|149024115|gb|EDL80612.1| similar to Sfrs4 protein (predicted) [Rattus norvegicus]
Length = 488
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|307219223|ref|NP_001182527.1| splicing factor, arginine/serine-rich 13B [Sus scrofa]
Length = 261
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V I R FA+VQFE +A
Sbjct: 8 PNTSLFVRNVADA-TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|255579604|ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
gi|223529816|gb|EEF31751.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
Length = 248
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P TL+V R ER ++ HF G V RI R FAFV + E+A +
Sbjct: 72 PGNTLYVTGLS-TRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMDNVEDANR 130
Query: 58 ALESTDRSKLVDRVISVE 75
++ ++S L R I+VE
Sbjct: 131 CVKYLNQSVLEGRYITVE 148
>gi|50950169|ref|NP_001002955.1| RNA-binding protein 47 [Canis lupus familiaris]
gi|75075043|sp|Q9XSR3.1|RBM47_CANFA RecName: Full=RNA-binding protein 47; AltName: Full=RNA-binding
motif protein 47
gi|5441611|emb|CAB46854.1| hypothetical protein [Canis lupus familiaris]
Length = 592
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ S +
Sbjct: 247 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVLAMNSLNG 305
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 306 TELEGSCLEVTLAKPVDKEQYSRY 329
>gi|390597697|gb|EIN07096.1| hypothetical protein PUNSTDRAFT_71302 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 282
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TR D+ + F+ YG+++ R+ F FV+FE+ +A AL + I +E+
Sbjct: 12 PPDTRSEDVSKFFDGYGHIVDCRVMTGFGFVEFESTRDAEDALNHFNGKPFNGANIVIEF 71
Query: 77 ALKDDSERDDRYDSPR 92
A K+ R D Y++ R
Sbjct: 72 A-KESRPRRDVYEADR 86
>gi|452838213|gb|EME40154.1| hypothetical protein DOTSEDRAFT_74850 [Dothistroma septosporum
NZE10]
Length = 856
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N + +RDI F YG++ + I++ + FVQF E+ +AL ++ D
Sbjct: 424 LFVGNLSSEKVTKRDIFHVFHTYGDLAQISIKQAYGFVQFLRNEDCQRALRDEQGRQIRD 483
Query: 70 RVISVEYALKDDSERDDRYDSPRR 93
+ I +E + S + ++ RR
Sbjct: 484 KRIHLEISKPQKSNNKQQQNAGRR 507
>gi|395829006|ref|XP_003787652.1| PREDICTED: serine/arginine-rich splicing factor 6 [Otolemur
garnettii]
Length = 345
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|340516128|gb|EGR46378.1| predicted protein [Trichoderma reesei QM6a]
Length = 206
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P LFV P R E ++ + FE YG V H + R F FV+ T E+A
Sbjct: 71 PGSNLFVTGIHP-RLSEAEVSKMFEKYGEVEKCQIMRDPHTKESRGFGFVKMVTSEQAEA 129
Query: 58 ALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 130 AKEGLQGEVIEGRTMSIEKA 149
>gi|270015083|gb|EFA11531.1| hypothetical protein TcasGA2_TC016051 [Tribolium castaneum]
Length = 303
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RERDI++ F YG + V ++ FAFV+F+ +A A+ + +L+ +SVE A
Sbjct: 13 RVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERA 71
>gi|125550625|gb|EAY96334.1| hypothetical protein OsI_18237 [Oryza sativa Indica Group]
Length = 331
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RTR RD++ HF YG + V ++R++AF++F +A +A + D + I VE+A
Sbjct: 29 RTRSRDLEYHFSRYGRIREVELKRDYAFIEFSDPRDAEEARYNLDGRDVDGSRILVEFA 87
>gi|392567011|gb|EIW60186.1| hypothetical protein TRAVEDRAFT_27854 [Trametes versicolor
FP-101664 SS1]
Length = 288
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R ++ + F+ YG ++ R+ F FV+FE+ +A A+++ + + I VE+
Sbjct: 11 PPDVRSEEVSKFFDGYGRIVDCRVMTGFGFVEFESSRDAEDAMQNFNGKNFMGSNIVVEF 70
Query: 77 ALKDDSERDDRYDSPR 92
A K+ R D YD+ R
Sbjct: 71 A-KETRPRRDPYDADR 85
>gi|348563835|ref|XP_003467712.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 6-like [Cavia porcellus]
Length = 341
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|440300922|gb|ELP93369.1| 29 kDa ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 248
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIR------RNFAFVQFETQEEATKALESTD 63
L+V N +T E +K HFE +G V R+ + F FV++ET+E+A KA+ ST
Sbjct: 4 LYVGNLS-FKTTEEAMKTHFESFGKVKECRLMIYRGYSKGFGFVEYETEEDAKKAVASTG 62
Query: 64 RSKLVDRVISVEYA 77
++ R + VE A
Sbjct: 63 -AEFDGRKVRVEVA 75
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEE 54
Q ++TL + + D+K+ FE + NV+ ++ + F FV+ +T+E+
Sbjct: 147 QEFSETLVFVGNLAFAATDDDLKKTFEKF-NVVSAKVVTFGRTYVKSKGFGFVELKTKED 205
Query: 55 ATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRR 93
A++ ++S ++R I+V A K ++ + +P +
Sbjct: 206 QQNAIKELNQSTQMERKITVSPAFKKQEKKAEEVAAPAK 244
>gi|410916817|ref|XP_003971883.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Takifugu
rubripes]
Length = 310
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RE+D++R F+ YG + + +++ F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLSPT-AREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|409082207|gb|EKM82565.1| hypothetical protein AGABI1DRAFT_111169 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200034|gb|EKV49958.1| hypothetical protein AGABI2DRAFT_190388 [Agaricus bisporus var.
bisporus H97]
Length = 289
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 35/61 (57%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R D+++ F+ +G ++ R+ F FV+FE+ ++A +A+ + + + I VE+
Sbjct: 11 PPDARSEDVQKFFDGFGRIIDCRVMTGFGFVEFESPKDAEEAVHTFNGKSFMGANIVVEF 70
Query: 77 A 77
A
Sbjct: 71 A 71
>gi|357618884|gb|EHJ71687.1| hypothetical protein KGM_12879 [Danaus plexippus]
Length = 728
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRN-------FAFVQFETQEEATKALESTDRSKLVDRV 71
+ E +K HFEPYGN+L V++ + AFV F+ A KAL +T+ + R
Sbjct: 162 KATEESLKEHFEPYGNILEVKLLKKPDGKLVGCAFVHFKNVPMAKKALLNTNMKPFLGRP 221
Query: 72 ISVEYALKDD 81
ISV++A+ D
Sbjct: 222 ISVDWAVPKD 231
>gi|62087532|dbj|BAD92213.1| arginine/serine-rich splicing factor 6 variant [Homo sapiens]
Length = 279
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 47 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 104
>gi|28839776|gb|AAH47836.1| Zgc:56141 protein [Danio rerio]
gi|197247072|gb|AAI65109.1| Zgc:56141 protein [Danio rerio]
Length = 249
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
NQ P K L V N + + + +++ FE YG V I +NFAFV +EA A++
Sbjct: 146 NQGPVK-LHVANVE--KGTDDELRALFEDYGTVAECAIIKNFAFVHMNNSDEAMDAIKGL 202
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAY 110
D ++ + I V+ + +D Y P GY H P + P+
Sbjct: 203 DNTEFQGKRIHVQISKSRPRGEEDDYGHP-DAGYWPHPPLDPALQPSL 249
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV 68
L++ N P + ++K F YG V I +NFAFV + ++ ATKA+++ KL
Sbjct: 75 CLYIGNL-PQQAEVDELKSLFSQYGTVTECAIIKNFAFVHMDDRKSATKAIKNLHLYKLH 133
Query: 69 DRVISVE 75
I+VE
Sbjct: 134 GTPINVE 140
>gi|448878298|gb|AGE46112.1| arginine/serine-rich splicing factor R2SZ35 transcript I [Sorghum
bicolor]
Length = 312
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L+V P RTR RD++ F YG + V ++R++AF++F +A A + D ++
Sbjct: 13 LYVGRLAP-RTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPHDADDAQYNLDGREVDG 71
Query: 70 RVISVEYA 77
I VE+A
Sbjct: 72 SRIIVEFA 79
>gi|340503359|gb|EGR29956.1| hypothetical protein IMG5_145470 [Ichthyophthirius multifiliis]
Length = 221
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
++V NF RT E D++ F+ YG+++ + ++R++AF+ ++ A A+ D++ +
Sbjct: 8 IYVTNFSS-RTNEEDLQYEFKKYGSIVDINMKRSYAFITYDDYHSAEDAIRKMDKAVING 66
Query: 70 RVISVE 75
+ I VE
Sbjct: 67 KQILVE 72
>gi|26252146|gb|AAH40811.1| Rbm28 protein [Mus musculus]
Length = 750
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKAVFTHYGTVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDS 90
++V++A+ D +D ++ S
Sbjct: 184 VAVDWAVAKDKYKDAQHAS 202
>gi|321252695|ref|XP_003192495.1| hypothetical protein CGB_B2920W [Cryptococcus gattii WM276]
gi|317458963|gb|ADV20708.1| Hypothetical protein CGB_B2920W [Cryptococcus gattii WM276]
Length = 286
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 18 IRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD 69
IRTRERD++ F YG+V V I R F F+ T E+A + +E + L
Sbjct: 91 IRTRERDLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTTEDAARCIEKLNGLSLHG 150
Query: 70 RVISVEYA 77
R I V+Y+
Sbjct: 151 RNIRVDYS 158
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 44.3 bits (103), Expect = 0.019, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 18/152 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI------RRNFAFVQFETQEEATKALEST 62
TLF+ N D +E I+ F +G +L ++I R F F+ + TQEEA A+E
Sbjct: 460 TLFIHNIDESIDKEV-IREEFAKHGTILGIKIVQENGKNRGFGFLSYSTQEEANIAIEKM 518
Query: 63 DRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG- 121
+ L + +SV ++ + +R + S G + P P P +P P Y R
Sbjct: 519 NGFILGSKPLSVSFSNRKYKKRMQQLQSN-----GSNDPSQPQPQPHIPLQPMPYYFRNP 573
Query: 122 -----RSPAYDRYNGPVYDQRRSPDHGRHRSP 148
P + G V+ + P + H+ P
Sbjct: 574 YHHHHPHPHSPHHQGQVFHPHQQPPYYTHQMP 605
>gi|254431254|ref|ZP_05044957.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
gi|197625707|gb|EDY38266.1| RNA-binding region RNP-1 [Cyanobium sp. PCC 7001]
Length = 169
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALE 60
++FV N P R + D+ F P+G V+ + +R FAFV+ E ++A+E
Sbjct: 2 SIFVGNL-PFRAEQEDVAELFAPFGEVVSCALPLERDTGRKRGFAFVEMADPEAESRAIE 60
Query: 61 STDRSKLVDRVISVEYA 77
+ S+L+ R + + A
Sbjct: 61 ALQGSELMGRPLRINKA 77
>gi|156039485|ref|XP_001586850.1| hypothetical protein SS1G_11879 [Sclerotinia sclerotiorum 1980]
gi|154697616|gb|EDN97354.1| hypothetical protein SS1G_11879 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 788
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + +RD+ F YG + + I++ F FVQF KALE ++
Sbjct: 346 LFIGNLPSEKLTKRDLFHVFHKYGELAQISIKQAFGFVQFHDASACHKALEMEQGKEVRG 405
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDR 128
R + +E + + R D G+S +RR SP++ RG + +R
Sbjct: 406 RKMHLEVSKAQKNTRKDHTS-------------GQS----WRRSQSPEHTRGNASGRNR 447
>gi|145512962|ref|XP_001442392.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409745|emb|CAK74995.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY-- 76
+ R D+++ FE YG + + +R AF++FE +EA +A+ D ++ ++V+
Sbjct: 13 KIRREDLQQEFEKYGKIKDIDLRSTHAFIEFEASDEAKQAISQVDGRRIGGDRVTVKQRD 72
Query: 77 ----ALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
++ + RD ++ R+G + G YR
Sbjct: 73 DRPSGVRGPTTRDVCFNCGRKGHWANECKEGDLRETCYR 111
>gi|1049082|gb|AAB60405.1| SRp40-3 [Homo sapiens]
gi|1049090|gb|AAA93074.1| SRp40-2 [Homo sapiens]
gi|34364611|emb|CAE45711.1| hypothetical protein [Homo sapiens]
gi|49457330|emb|CAG46964.1| SFRS5 [Homo sapiens]
gi|49457360|emb|CAG46979.1| SFRS5 [Homo sapiens]
gi|189053126|dbj|BAG34748.1| unnamed protein product [Homo sapiens]
gi|197692201|dbj|BAG70064.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALK 79
TRERD+++ F+ YG + V ++ + FV+FE +A A++ D + + VE+A
Sbjct: 17 TRERDVEKFFKGYGKLREVALKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFARS 76
Query: 80 DDSERDDRY 88
+R+ RY
Sbjct: 77 PREKRNSRY 85
>gi|449450504|ref|XP_004143002.1| PREDICTED: uncharacterized protein LOC101216322 [Cucumis sativus]
Length = 257
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTYSLLVLNI-TFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D L R I V++A
Sbjct: 72 KAIDKLDGRMLDGREIMVQFA 92
>gi|291225685|ref|XP_002732813.1| PREDICTED: splicing factor, arginine/serine-rich 10-like
[Saccoglossus kowalevskii]
Length = 269
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN L V + T ER+++ F YG + ++ + R FAF+ +E++E
Sbjct: 109 ANPETNNCLGVFGLS-LSTTERELREAFGRYGPIANINVVYDHQSGRSRGFAFLSYESEE 167
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSER------DDRYDSPRRGGYGRHSPYGR 104
+A +A + T+ ++ R I V+Y++ + R P+RGGY R PY R
Sbjct: 168 DAREAKDRTNGMEIDGRRIRVDYSITKRAHTPTPGIYMGRPTYPKRGGYDRDPPYER 224
>gi|225708540|gb|ACO10116.1| Splicing factor, arginine/serine-rich 5 [Osmerus mordax]
Length = 135
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ +G + + ++R F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLNP-SAREKDVERFFKGFGRIRDIDLKRGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|449528821|ref|XP_004171401.1| PREDICTED: uncharacterized LOC101216322 [Cucumis sativus]
Length = 251
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTYSLLVLNI-TFRTTADDLYPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D L R I V++A
Sbjct: 72 KAIDKLDGRMLDGREIMVQFA 92
>gi|449478880|ref|XP_004155443.1| PREDICTED: uncharacterized protein LOC101223695 [Cucumis sativus]
Length = 283
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + + R I+V++A
Sbjct: 74 VERLDGTMVDGREITVQFA 92
>gi|313212059|emb|CBY17785.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV 68
T+F+ R R++DI+ F+ YG V +R+R + FV F+ + +A A++ D S L
Sbjct: 6 TVFIGGLSD-RARDKDIEDFFDKYGKVTQIRLRDRYGFVDFDDRRDAEDAIKDLDGSSLC 64
Query: 69 DRVISVEYA 77
+ +E A
Sbjct: 65 GERVRLELA 73
>gi|189233695|ref|XP_001812208.1| PREDICTED: similar to B52 CG10851-PA [Tribolium castaneum]
Length = 300
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RERDI++ F YG + V ++ FAFV+F+ +A A+ + +L+ +SVE A
Sbjct: 13 RVRERDIEKFFRKYGRIKEVAMKNGFAFVEFDDYRDADDAVYELNGKELLGERVSVERA 71
>gi|58258445|ref|XP_566635.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222772|gb|AAW40816.1| hypothetical protein CNA02490 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 18 IRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD 69
IRTRERD++ F YG+V V I R F F+ T ++A + +E + L
Sbjct: 91 IRTRERDLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVDDAARCIEKLNGLSLHG 150
Query: 70 RVISVEYALKDDSE--------------RDDRYD----SPRRGGYG 97
R I V+Y+ RDDRY RRGGYG
Sbjct: 151 RNIRVDYSATQKPHSSTPGQYMGAKRPVRDDRYGRGRYDDRRGGYG 196
>gi|348510431|ref|XP_003442749.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Oreochromis niloticus]
Length = 342
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + +E+A
Sbjct: 13 VREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHA 70
>gi|348505102|ref|XP_003440100.1| PREDICTED: scaffold attachment factor B2-like [Oreochromis
niloticus]
Length = 829
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATKA 58
++ L+V TR D+K F YG V+ ++ N + FV + EEATK
Sbjct: 375 SRNLWVSGLSST-TRATDLKTLFSKYGKVVGAKVVTNAKSPGARCYGFVTMSSTEEATKC 433
Query: 59 LESTDRSKLVDRVISVEYA 77
+ R++L R+ISVE A
Sbjct: 434 ISHLHRTELHGRMISVERA 452
>gi|440893251|gb|ELR46093.1| Serine/arginine-rich splicing factor 6 [Bos grunniens mutus]
Length = 348
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|351695941|gb|EHA98859.1| Splicing factor, arginine/serine-rich 4 [Heterocephalus glaber]
Length = 489
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes]
Length = 287
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 115 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 173
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 174 DAKEAKEKANGMELDGRRIRVDFSI 198
>gi|388856974|emb|CCF49394.1| related to pre-mrna splicing factor srp55 [Ustilago hordei]
Length = 259
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P R DI+ F YG + VRI F FV+FE +A A++ D + I V++
Sbjct: 11 PADVRRGDIEDLFRDYGRLYDVRIMGTFGFVEFEHHRDAEDAVKDFDGKNFMGERIVVQH 70
Query: 77 ALKDDSER-------DDRYDSPRRGGYGRHSP--YGRSPS 107
A + + R D YD RRGG GR P YG S +
Sbjct: 71 AKQSERRRPEPAGYGSDPYD--RRGGGGREPPSRYGSSVA 108
>gi|344270941|ref|XP_003407300.1| PREDICTED: RNA-binding protein 28 isoform 1 [Loxodonta africana]
Length = 755
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F +G VL V I R FAFVQF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKTIFAQFGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSP 108
++V++A+ D +D + S S G+SP P
Sbjct: 184 VAVDWAVAKDKYKDTQSASA--------SGEGKSPEP 212
>gi|297849028|ref|XP_002892395.1| hypothetical protein ARALYDRAFT_470756 [Arabidopsis lyrata subsp.
lyrata]
gi|297338237|gb|EFH68654.1| hypothetical protein ARALYDRAFT_470756 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
+ P +L+V R ERD++ HF G V V + R F F+ E+ +A
Sbjct: 70 ENPGNSLYVTGLSH-RVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMESVGDA 128
Query: 56 TKALESTDRSKLVDRVISVEYA 77
+ + D S L RVI+VE A
Sbjct: 129 NRCIRYLDHSVLQGRVITVEKA 150
>gi|116175261|ref|NP_001070685.1| serine/arginine-rich splicing factor 6 [Sus scrofa]
gi|115371751|gb|ABI96200.1| SFRS6 [Sus scrofa]
Length = 345
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|71027417|ref|XP_763352.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350305|gb|EAN31069.1| hypothetical protein, conserved [Theileria parva]
Length = 248
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 9/77 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNF--------AFVQFETQEEATK 57
P LFV +P+ T E+D+K F +GNV I +++ AF++FET+E +
Sbjct: 51 PKNVLFVCKLNPV-TEEKDLKIIFSRFGNVKSCDIIKDYVTGDSLQYAFIEFETEESCNE 109
Query: 58 ALESTDRSKLVDRVISV 74
A + DR +SV
Sbjct: 110 AYFKMQNVLIDDRRLSV 126
>gi|56118384|ref|NP_001007946.1| serine/arginine-rich splicing factor 12 [Xenopus (Silurana)
tropicalis]
gi|51513232|gb|AAH80452.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
gi|89272962|emb|CAJ83214.1| serine-arginine repressor protein (35 kDa) [Xenopus (Silurana)
tropicalis]
Length = 253
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG ++ V R R FA++QFE +A
Sbjct: 8 PNTSLFVRNVADA-TRPEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Splicing factor, arginine/serine-rich 4
gi|18043896|gb|AAH19437.1| Sfrs4 protein [Mus musculus]
Length = 489
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|344282129|ref|XP_003412827.1| PREDICTED: transformer-2 protein homolog beta-like [Loxodonta
africana]
Length = 390
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 206 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 264
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 265 DAKEAKERANGMELDGRRIRVDFSI 289
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLV 68
+T + +K F+ YGNV+ RI R F FV + + EEA+ A+++ D L
Sbjct: 48 SFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLH 107
Query: 69 DRVISVEYALK 79
R + V YA +
Sbjct: 108 GRRVRVNYATE 118
>gi|449438193|ref|XP_004136874.1| PREDICTED: uncharacterized protein LOC101219227 [Cucumis sativus]
Length = 283
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + + R I+V++A
Sbjct: 74 VERLDGTMVDGREITVQFA 92
>gi|78191396|gb|ABB29919.1| unknown [Solanum tuberosum]
Length = 258
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ V I R FAFV+++ Q+EA KA
Sbjct: 15 TYSLLVLNV-TFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYQDEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I V +A
Sbjct: 74 VEKLDGRVVDGREIMVRFA 92
>gi|348522786|ref|XP_003448905.1| PREDICTED: transformer-2 protein homolog alpha-like [Oreochromis
niloticus]
Length = 279
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P+ L V + T ERD++ F YG + V + R FAFV FE E
Sbjct: 113 ANPDPSTCLGVFGLS-LYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERLE 171
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A+E + +L R I V+Y++
Sbjct: 172 DSKEAMERANGMELDGRRIRVDYSI 196
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQE 53
A P KTLF+ N T E +KR E YG++ + I RN +AFV+FE +
Sbjct: 98 ATSDPFKTLFISNLS-YDTTEESLKREMEEYGSIKQIHIVRNTQTSKPRGYAFVEFEHER 156
Query: 54 EATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSP 101
+ A + D K+ R I V++ + R + PRR G G P
Sbjct: 157 DMKDAYKQADGRKVDGRRIVVDF----ERGRTIKEWKPRRLGGGVGLP 200
>gi|47224367|emb|CAG09213.1| unnamed protein product [Tetraodon nigroviridis]
Length = 151
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RE+D++R F+ YG + + +++ F FV+F+ +A A+ D +L +
Sbjct: 6 IFIGRLSPT-AREKDVERFFKGYGRIRDIDLKKGFGFVEFDDPRDAEDAVYELDGKELCN 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|296481070|tpg|DAA23185.1| TPA: splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|358394588|gb|EHK43981.1| hypothetical protein TRIATDRAFT_293293, partial [Trichoderma
atroviride IMI 206040]
Length = 859
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N + +RD+ F +G + + ++ + FVQ+ T EE ALE+ ++
Sbjct: 375 IFIGNLSSDKVSKRDVFDIFHRFGRLAQISLKSAYGFVQYHTVEEGHSALENLQGMEVKG 434
Query: 70 RVISVEYALKDDSERDDRYDSP 91
R I +E + D + +R SP
Sbjct: 435 RRIHLEISRLQDKSKKERNRSP 456
>gi|449486099|ref|XP_002195735.2| PREDICTED: serine/arginine-rich splicing factor 6 [Taeniopygia
guttata]
Length = 348
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|225718298|gb|ACO14995.1| Splicing factor, arginine/serine-rich 4 [Caligus clemensi]
Length = 234
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
TRERD+++ F+ YG + + ++ + FV+FE +A A++ D + + VE+A
Sbjct: 17 TRERDVEKFFKGYGKLREIALKNGYGFVEFEDHRDADDAVQDLDGKDMNGSRVRVEFA 74
>gi|169404002|ref|NP_955868.1| serine/arginine-rich splicing factor 4 [Danio rerio]
gi|326676581|ref|XP_003200617.1| PREDICTED: hypothetical protein LOC321872 [Danio rerio]
gi|28461393|gb|AAH46895.1| Zgc:55809 [Danio rerio]
gi|182890456|gb|AAI64410.1| Zgc:55809 protein [Danio rerio]
Length = 366
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + L + + VE+ +
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKDLCGKRVIVEHTI 71
>gi|387018626|gb|AFJ51431.1| Serine/arginine-rich splicing factor 12-like [Crotalus
adamanteus]
Length = 234
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P +LFV N TR D++R F YG V+ V I R FA++QFE +A
Sbjct: 8 PNTSLFVRNVADA-TRPEDLRREFGRYGPVVDVYIPLDFYTRRPRGFAYIQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|62898449|dbj|BAD97164.1| splicing factor, arginine/serine-rich 4 variant [Homo sapiens]
Length = 382
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|355715663|gb|AES05398.1| RNA binding motif protein 28 [Mustela putorius furo]
Length = 756
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K +I + E D+K F YG VL V I R FAFVQF+ EA KAL+
Sbjct: 113 KARLIIRNLSFKCSEDDLKTVFAQYGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDY 118
S + ++ R ++V++A+ D ++ + S +P +RP P +
Sbjct: 173 SMNMKEIKGRTVAVDWAVAKDKYKNTQSAS----------------APGEEKRPEPKH 214
>gi|359322750|ref|XP_003639908.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Canis lupus familiaris]
Length = 344
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|224060641|ref|XP_002193452.1| PREDICTED: nucleolin [Taeniopygia guttata]
Length = 692
Score = 43.9 bits (102), Expect = 0.024, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEAT 56
+R +TLF+ N P R E DI+ FE N L VRI R A+V+F+T+ EA
Sbjct: 365 ERDARTLFLKNL-PYRITEDDIREVFE---NALEVRIVMNKDGNSRGMAYVEFKTEAEAD 420
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERDDRYDS 90
KALE +++ R + +++ + + + + +S
Sbjct: 421 KALEEKQGTEIEGRAVVIDFTGEKSQQENQKGES 454
>gi|225459316|ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
gi|302141951|emb|CBI19154.3| unnamed protein product [Vitis vinifera]
Length = 257
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTYSLLVLNI-TFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA+E D + R I V++A
Sbjct: 72 KAVEKLDGRNVDGREIMVQFA 92
>gi|155372181|ref|NP_001094701.1| serine/arginine-rich splicing factor 4 [Bos taurus]
gi|154425888|gb|AAI51319.1| SFRS4 protein [Bos taurus]
gi|296490028|tpg|DAA32141.1| TPA: splicing factor, arginine/serine-rich 4 [Bos taurus]
Length = 493
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|354545626|emb|CCE42354.1| hypothetical protein CPAR2_809030 [Candida parapsilosis]
Length = 345
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 31/139 (22%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEA 55
P++ LFV ++FD T E +++ HF+ G+++ +R+ + FAF+ F++++ A
Sbjct: 173 PSRILFVGNLSFD---TTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFAFIDFKSEDGA 229
Query: 56 TKALESTDRSKLVDRVISVEYA-----------LKDDSERDDRYDSPRRGGYGRHSPYGR 104
A++S +++R + +EY ++DD E D D GR R
Sbjct: 230 ITAMKSKLAKSMLNRKLRLEYGEDRSKRRPKSHMRDDVEAGDAAD-------GRKQYRER 282
Query: 105 SPSPAYRRRPSPDYGRGRS 123
++R +P + R RS
Sbjct: 283 PQENSHREKPQDNSHRERS 301
>gi|238014292|gb|ACR38181.1| unknown [Zea mays]
gi|413950154|gb|AFW82803.1| hypothetical protein ZEAMMB73_678679 [Zea mays]
gi|448878172|gb|AGE46049.1| arginine/serine-rich splicing factor RS2Z37A transcript I [Zea
mays]
Length = 325
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L+V P RTR RD++ F YG + V ++R++AF++F +A A + D +
Sbjct: 13 LYVGRLSP-RTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDAQYNLDGRDVDG 71
Query: 70 RVISVEYA 77
I VE+A
Sbjct: 72 SRIIVEFA 79
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
T+FV DP T E +K+ F PYG +++V+I + FVQ+ + A +A+ + S+
Sbjct: 313 TVFVGGLDPSVTDEV-LKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ 371
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP 106
L + I + + +++ + + GY + P G P
Sbjct: 372 LGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDP 411
>gi|440907568|gb|ELR57702.1| Serine/arginine-rich splicing factor 4, partial [Bos grunniens
mutus]
Length = 488
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 6 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 64
>gi|8778550|gb|AAF79558.1|AC022464_16 F22G5.31 [Arabidopsis thaliana]
Length = 415
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHV-----------RIRRNFAFVQFETQ 52
+ P +L+V R ERD++ HF G V+ V R R F F+ ++
Sbjct: 103 ENPGNSLYVTGLSH-RVTERDLEDHFAKEGKVVDVTDVHLVLDPWTRESRGFGFISMKSV 161
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
+A + + S D S L RVI+VE A
Sbjct: 162 GDANRCIRSLDHSVLQGRVITVEKA 186
>gi|378727758|gb|EHY54217.1| 26S proteasome regulatory subunit N7 [Exophiala dermatitidis
NIH/UT8656]
Length = 206
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 22 ERDIKRHFEPYGNV--LHVRIRR------NFAFVQFETQEEATKALESTDRSKLVDRVIS 73
E DI F YG++ LH+ + R + +++ TQ EA A+++ + +KL+D+ IS
Sbjct: 81 EEDITDLFGEYGDIKNLHLNLDRRTGYVKGYVLIEYPTQVEAASAIKALNGAKLLDQTIS 140
Query: 74 VEYAL 78
V+YA
Sbjct: 141 VDYAF 145
>gi|326475615|gb|EGD99624.1| hypothetical protein TESG_06970 [Trichophyton tonsurans CBS 112818]
gi|326483761|gb|EGE07771.1| transformer-SR ribonucleoprotein [Trichophyton equinum CBS 127.97]
Length = 304
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEA 55
Q LFV P R E D+ R FE YG V H + R F FV T ++A
Sbjct: 62 QNTGTNLFVTGIHP-RLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMATPDQA 120
Query: 56 TKALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 121 EAAREGLQGEVIDGRTLSIEKA 142
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATKA 58
P KTLF+ N ER ++ FE YG + +RI R +AF++F+T+ E A
Sbjct: 96 PYKTLFIGNL-AYEATERQLRSEFEAYGKIKRIRIIADANGNPRGYAFIEFDTEREMVNA 154
Query: 59 LESTDRSKLVDRVISVE 75
+ D K+ R + V+
Sbjct: 155 YKRGDGRKIAGRRVIVD 171
>gi|357614246|gb|EHJ68984.1| hypothetical protein KGM_20249 [Danaus plexippus]
Length = 260
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K L+V N T E +K FE YGNV V+ +++AFV FE ++ A KA++ D +
Sbjct: 81 VKVLYVRNLTQEITEEA-LKEEFERYGNVERVKKIKDYAFVHFEDRDCAVKAMQEIDGKE 139
Query: 67 LVDRVISVEYA 77
L + V A
Sbjct: 140 LGGARLEVSLA 150
>gi|47212367|emb|CAF89932.1| unnamed protein product [Tetraodon nigroviridis]
Length = 636
Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKL 67
K LFV N T E +++ F YGN+ V+ +++AF+ FE ++ A KALE + +L
Sbjct: 338 KVLFVRNLANSVTEEI-LEKAFSEYGNLERVKKLKDYAFIHFEERDGAVKALEELNGKEL 396
Query: 68 VDRVISVEYALKDDSERDDR 87
I + +A D +R +R
Sbjct: 397 EGEPIEIVFAKPPDQKRKER 416
>gi|301788378|ref|XP_002929604.1| PREDICTED: hypothetical protein LOC100475275 [Ailuropoda
melanoleuca]
Length = 498
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|157822711|ref|NP_001101320.1| RNA-binding protein 28 [Rattus norvegicus]
gi|149065129|gb|EDM15205.1| RNA binding motif protein 28 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 700
Score = 43.9 bits (102), Expect = 0.026, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAF+QF+ EA KAL+ + ++ R
Sbjct: 124 KCSEDDLKSVFTHYGTVLEVNIPRKPDGKMRGFAFIQFKNLLEAGKALKGANMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDSPRRG 94
++V++A+ D +D ++ S G
Sbjct: 184 VAVDWAVAKDKYKDAQHTSVSGG 206
>gi|440297474|gb|ELP90168.1| ribonucleoprotein, putative [Entamoeba invadens IP1]
Length = 237
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 55/102 (53%), Gaps = 12/102 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYG----NVLH--VRIRRNFAFVQFETQEEATKALESTD 63
L++ N D +T ++K F+ Y N+L + + R F F+ +T+E+A KALE D
Sbjct: 4 LYIGNLD-FQTTNEELKAAFQAYNVVEVNILKTPINLSRGFGFIDVKTEEDAKKALE-MD 61
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHS--PYG 103
+ + R I VE AL +D ++ R + RR YG H+ PY
Sbjct: 62 KKTIGKRSIRVELALPED-KKVKREEGARR-PYGYHARRPYA 101
>gi|241856245|ref|XP_002416055.1| RNA binding motif-containing protein, putative [Ixodes
scapularis]
gi|215510269|gb|EEC19722.1| RNA binding motif-containing protein, putative [Ixodes
scapularis]
Length = 195
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 6 PTKTLFVINF-DPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
P LFV + D +RT E ++ F YG V + + FV T+EE +AL++ +
Sbjct: 3 PRTKLFVGHLPDGLRTEE--LQELFAKYGTVTECDVINKYGFVHMSTEEECEEALKNLNN 60
Query: 65 SKLVDRVISVE 75
+ +SVE
Sbjct: 61 YNFMGSTLSVE 71
>gi|431904517|gb|ELK09900.1| Splicing factor, arginine/serine-rich 5 [Pteropus alecto]
Length = 223
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes]
Length = 297
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 125 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 183
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 184 DAKEAKEKANGMELDGRRIRVDFSI 208
>gi|403293287|ref|XP_003937651.1| PREDICTED: serine/arginine-rich splicing factor 4 [Saimiri
boliviensis boliviensis]
Length = 500
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|241574285|ref|XP_002403076.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
gi|215502149|gb|EEC11643.1| alternative splicing factor SRp55/B52/SRp75, putative [Ixodes
scapularis]
Length = 268
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV 68
T I + RE+D+ + F+ YG V + ++ F FV+F+ +A A+ + +L+
Sbjct: 3 TRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKELL 62
Query: 69 DRVISVEYA 77
+SVE A
Sbjct: 63 GERVSVELA 71
>gi|195611398|gb|ACG27529.1| splicing factor, arginine/serine-rich 7 [Zea mays]
gi|223973611|gb|ACN30993.1| unknown [Zea mays]
gi|413942175|gb|AFW74824.1| Splicing factor, arginine/serine-rich 7 isoform 1 [Zea mays]
gi|413942176|gb|AFW74825.1| Splicing factor, arginine/serine-rich 7 isoform 2 [Zea mays]
gi|448878178|gb|AGE46052.1| arginine/serine-rich splicing factor RS2Z37B transcript I [Zea
mays]
Length = 333
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L+V P RTR RD++ F YG + V ++R++AF++F +A +A D +
Sbjct: 13 LYVGRLAP-RTRSRDLEYLFGKYGRIREVELKRDYAFIEFSEHRDADEARYQLDGRDVDG 71
Query: 70 RVISVEYA 77
I VE+A
Sbjct: 72 SRIVVEFA 79
>gi|157279827|ref|NP_001098427.1| transformer 2b isoform 2 [Oryzias latipes]
gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzias latipes]
Length = 297
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 125 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 183
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 184 DAKEAKEKANGMELDGRRIRVDFSI 208
>gi|327273505|ref|XP_003221521.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 47-like [Anolis
carolinensis]
Length = 603
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A +A+ + +
Sbjct: 247 VKILYVRNLM-IETTEDTIKKVFGQFNPGCVERVKKIRDYAFVHFTSREDAVQAMNNLNN 305
Query: 65 SKLVDRVISVEYALKDDSERDDRYDS 90
++L + V A D E+ RY +
Sbjct: 306 TELEGSCLEVTLAKPVDKEQYTRYQN 331
>gi|291399268|ref|XP_002716024.1| PREDICTED: FUS interacting protein (serine-arginine rich) 1
[Oryctolagus cuniculus]
Length = 182
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
+LFV N TR D++R F YG ++ V + R FA+VQFE +A AL
Sbjct: 11 SLFVRNVAD-DTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALH 69
Query: 61 STDRSKLVDRVISVEYALKD 80
+ DR + R I +++A D
Sbjct: 70 NLDRKWICGRQIEIQFAQGD 89
>gi|307189409|gb|EFN73819.1| Serine-arginine protein 55 [Camponotus floridanus]
Length = 387
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TRERD++R F YG V I+ + FV+F+ +A A+ + +L+ I+VE
Sbjct: 65 PYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVER 124
Query: 77 ALKDDSERDDRYDSPRRGGYG 97
A D RGGYG
Sbjct: 125 ARGTPRGSDQWRYGDSRGGYG 145
>gi|281340422|gb|EFB16006.1| hypothetical protein PANDA_019831 [Ailuropoda melanoleuca]
Length = 488
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|123471700|ref|XP_001319048.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901822|gb|EAY06825.1| hypothetical protein TVAG_314000 [Trichomonas vaginalis G3]
Length = 188
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQE 53
M +Q P + I++ + +E D++ H EP+G VL ++I + A V + T E
Sbjct: 1 MGDQVPRILVGNISW---QIKEEDLRPHLEPFGKVLSIKIPRKSNGYSKGLAIVDYSTME 57
Query: 54 EATKALESTDRSKLVDRVI 72
EA A E + L +R +
Sbjct: 58 EAKAACEGLKQKVLFEREV 76
>gi|296207272|ref|XP_002750572.1| PREDICTED: serine/arginine-rich splicing factor 4 [Callithrix
jacchus]
Length = 500
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|385306067|gb|EIF50001.1| rna-binding protein [Dekkera bruxellensis AWRI1499]
Length = 693
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N ++ ++ R F PYG ++ V +++ F F+Q+ E ++A+ L +
Sbjct: 145 LFIGNLAVNTLKKEEVFRVFHPYGRIVQVNLKQGFGFIQYTNAESCSRAIRGESNVPLHN 204
Query: 70 RVISVEYA 77
+ + +E +
Sbjct: 205 KFMHLEVS 212
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 56/114 (49%), Gaps = 20/114 (17%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEAT 56
P +TLFV I++D T E+ +KR F+ YG++ VR+ R + F++FE +
Sbjct: 96 PFRTLFVAGISYD---TTEKKLKREFDQYGSIKRVRLIYDRNGKPRGYGFIEFENDRDMK 152
Query: 57 KALESTDRSKLVDRVISVEYALKDDSERDDRYDS--PRRGGYGRHSPYGRSPSP 108
+A ++ D K+ R + V D ER PRR G GR P G + P
Sbjct: 153 EAYKNADGKKIDGRRVLV------DVERARTVPGWLPRRLGGGRGKPRGTNTKP 200
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
PT TLF+ N T+E D+ F P+G V+ +R+ + F +V F + +EA
Sbjct: 357 PTDTLFLGNLSFDCTQE-DVSEAFAPHGTVMGIRLPTDRETGAPKGFGYVTFGSVDEAKA 415
Query: 58 ALESTDRSKLVDRVISVEYA 77
ALE+ + +R I ++Y+
Sbjct: 416 ALEAMQGGYIKNRPIRLDYS 435
>gi|169621851|ref|XP_001804335.1| hypothetical protein SNOG_14138 [Phaeosphaeria nodorum SN15]
gi|160704635|gb|EAT78375.2| hypothetical protein SNOG_14138 [Phaeosphaeria nodorum SN15]
Length = 966
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Query: 90 SPRRGGYG--------RHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPD 141
SP+RGGYG + S YGR + R YGR S Y R Y +
Sbjct: 831 SPKRGGYGEERGYQSQQQSSYGREETYGSGREEVSGYGRQESSGYGRQESSGYGREEPSG 890
Query: 142 HGRHRSPVPVYDRRRSPDYGRNRSPNFGR 170
+GR S Y R S YGR S +GR
Sbjct: 891 YGRQES--SGYGREESSGYGRQESSGYGR 917
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 88 YDSPRRGGYGRHSPY--GRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRH 145
Y S ++ YGR Y GR Y R+ S YGR S Y R Y ++ S +GR
Sbjct: 843 YQSQQQSSYGREETYGSGREEVSGYGRQESSGYGRQESSGYGREEPSGYGRQESSGYGRE 902
Query: 146 RSPVPVYDRRRSPDYGRN 163
S Y R+ S YGR
Sbjct: 903 ES--SGYGRQESSGYGRQ 918
>gi|442749577|gb|JAA66948.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 268
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV 68
T I + RE+D+ + F+ YG V + ++ F FV+F+ +A A+ + +L+
Sbjct: 3 TRVFIGHLSCQVREKDLDKFFKGYGRVGDIHLKNGFGFVEFDDHRDADDAISDLNGKELL 62
Query: 69 DRVISVEYA 77
+SVE A
Sbjct: 63 GERVSVELA 71
>gi|148612890|ref|NP_542781.3| serine/arginine-rich splicing factor 12 [Homo sapiens]
gi|47606193|sp|Q8WXF0.1|SRS12_HUMAN RecName: Full=Serine/arginine-rich splicing factor 12; AltName:
Full=35 kDa SR repressor protein; Short=SRrp35;
AltName: Full=Splicing factor, arginine/serine-rich
13B; AltName: Full=Splicing factor,
arginine/serine-rich 19
gi|18034491|gb|AAL57515.1|AF449428_1 SRrp35 [Homo sapiens]
gi|189054199|dbj|BAG36719.1| unnamed protein product [Homo sapiens]
gi|261859278|dbj|BAI46161.1| 35 kDa SR repressor protein [synthetic construct]
gi|380809714|gb|AFE76732.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
gi|384945376|gb|AFI36293.1| serine/arginine-rich splicing factor 12 [Macaca mulatta]
Length = 261
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N TR D++R F YG ++ V I R FA+VQFE +A
Sbjct: 8 PNTSLFIRNVADA-TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|395505266|ref|XP_003756964.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 2
[Sarcophilus harrisii]
Length = 321
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|226467596|emb|CAX69674.1| Splicing factor, arginine/serine-rich 7 [Schistosoma japonicum]
Length = 284
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 14/136 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALE 60
Q + L++ +E D+ R G V+ V + RN FAF ++ +A KA+
Sbjct: 6 QEKCRKLYIGGLVENVLKE-DLVRELSKCGEVVDVWVARNPPGFAFAEYVKSSDAEKAVR 64
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
S D + I VE+A S+ R S RGG P GR P RRR SP
Sbjct: 65 SLDGVNVCGSRIRVEFAHGGRSKSAVR--SAFRGG----RPVGRGP---LRRRNSPRRS- 114
Query: 121 GRSPAYDRYNGPVYDQ 136
GR+ +YD + P +DQ
Sbjct: 115 GRNSSYDGHRYPDHDQ 130
>gi|71895047|ref|NP_001026014.1| splicing factor, arginine/serine-rich 6 [Gallus gallus]
gi|53133810|emb|CAG32234.1| hypothetical protein RCJMB04_20j14 [Gallus gallus]
Length = 348
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVKFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|148236671|ref|NP_001080216.1| transformer 2 alpha homolog [Xenopus laevis]
gi|27924195|gb|AAH44990.1| Tra2a-prov protein [Xenopus laevis]
Length = 276
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P + V + T ERDI+ F YG + V + R FAFV FE E
Sbjct: 106 ANPDPNLCIGVFGLS-LYTTERDIREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIE 164
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A+E D +L R I V+Y++
Sbjct: 165 DSREAMEHADGMELDGRRIRVDYSI 189
>gi|116192351|ref|XP_001221988.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
gi|88181806|gb|EAQ89274.1| hypothetical protein CHGG_05893 [Chaetomium globosum CBS 148.51]
Length = 361
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
PT LF+ N P T + ++ R F+ GNV VR+ R FA F + E A
Sbjct: 229 PTAQLFIGNI-PYETTDAELNRIFQGMGNVKDVRVAVDRTTGWPRGFAHADFPSVEAAID 287
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + +KL DR++ +++A
Sbjct: 288 AKQRLEGAKLNDRLLRIDFA 307
>gi|383855732|ref|XP_003703364.1| PREDICTED: RNA-binding protein 28-like [Megachile rotundata]
Length = 747
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRR-------NFAFVQFETQEEATKALESTDRSKLVD 69
P + E D+++ +EP+G ++ + + F+QF+ E+A+KA+ +T++ +L+
Sbjct: 51 PFKATEEDVRKFYEPFGQIVEINFPKRPDGAPLGCCFIQFKQLEQASKAIFNTNKKELLG 110
Query: 70 RVISVEYAL 78
R+IS +A+
Sbjct: 111 RIISSSWAI 119
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRR-------NFAFVQFETQEEATK 57
R + ++ + E ++K HF YG + V+I + AF+QF+ + A K
Sbjct: 185 RKKRARIIVRNLAFQVTEENLKDHFSQYGEIEEVKILKRSDGKNVGCAFLQFDHVQSAAK 244
Query: 58 ALESTDRSKLVDRVISVEYAL 78
A+ + +L DR I V++A+
Sbjct: 245 AIHYANLQELFDRPIVVDWAV 265
>gi|116175257|ref|NP_001070684.1| serine/arginine-rich splicing factor 4 [Sus scrofa]
gi|115371753|gb|ABI96201.1| SFRS4 [Sus scrofa]
Length = 491
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|78369222|ref|NP_001030349.1| serine/arginine-rich splicing factor 6 [Bos taurus]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN RecName: Full=Serine/arginine-rich splicing factor 6; AltName:
Full=Splicing factor, arginine/serine-rich 6
gi|77567850|gb|AAI07554.1| Splicing factor, arginine/serine-rich 6 [Bos taurus]
Length = 345
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSRDADDAVYELNGKELCGERVIVEHA 70
>gi|417404448|gb|JAA48976.1| Putative nucleolar protein fibrillarin nop77 rrm superfamily
[Desmodus rotundus]
Length = 763
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAFVQF+ EA KAL+S + ++ R
Sbjct: 124 KCSEDDLKTIFAQYGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKSMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERDDRYDS 90
I+V++A+ D ++ + S
Sbjct: 184 IAVDWAVAKDKYKNTQSAS 202
>gi|410966619|ref|XP_003989828.1| PREDICTED: serine/arginine-rich splicing factor 4 [Felis catus]
Length = 499
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
T+FV DP T E +K+ F PYG +++V+I + FVQ+ + A +A+ + S+
Sbjct: 269 TVFVGGLDPSVTDEV-LKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ 327
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS--PDYGRGRSP 124
L + I + + +++ + + GY + P G P Y R P Y P
Sbjct: 328 LGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPY-GYARPPQDPAMYAYAAYP 386
Query: 125 AYDRY 129
Y Y
Sbjct: 387 GYGNY 391
>gi|165377173|ref|NP_065612.2| serine/arginine-rich splicing factor 4 [Mus musculus]
gi|26449170|dbj|BAC36925.1| unnamed protein product [Mus musculus]
gi|74152317|dbj|BAE33925.1| unnamed protein product [Mus musculus]
gi|148698178|gb|EDL30125.1| splicing factor, arginine/serine-rich 4 (SRp75) [Mus musculus]
Length = 491
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|213515188|ref|NP_001133716.1| transformer-2 protein homolog beta [Salmo salar]
gi|209155068|gb|ACI33766.1| Splicing factor, arginine/serine-rich 10 [Salmo salar]
Length = 302
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +E
Sbjct: 114 ANPDPNCCLGVFGLS-LYTTERDLRDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFEVRE 172
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A A E + +L R I V++++
Sbjct: 173 DANGAKERANGMELDGRRIRVDFSI 197
>gi|114555162|ref|XP_001155042.1| PREDICTED: serine/arginine-rich splicing factor 4 isoform 5 [Pan
troglodytes]
gi|397515847|ref|XP_003828154.1| PREDICTED: serine/arginine-rich splicing factor 4 [Pan paniscus]
gi|261858864|dbj|BAI45954.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
gi|410219650|gb|JAA07044.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253776|gb|JAA14855.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410253778|gb|JAA14856.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410300938|gb|JAA29069.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
gi|410356834|gb|JAA44544.1| serine/arginine-rich splicing factor 4 [Pan troglodytes]
Length = 494
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|432882989|ref|XP_004074178.1| PREDICTED: uncharacterized protein LOC101163182 isoform 2 [Oryzias
latipes]
Length = 384
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 20/95 (21%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA- 77
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHTK 71
Query: 78 --------------LKDDSERDDRYDSPRRGGYGR 98
L +S R S + GGYGR
Sbjct: 72 GPRRDGGYGGGGRNLDQESSR-----SSKNGGYGR 101
>gi|431891168|gb|ELK02045.1| Splicing factor, arginine/serine-rich 4 [Pteropus alecto]
Length = 500
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|330795642|ref|XP_003285881.1| hypothetical protein DICPUDRAFT_149785 [Dictyostelium purpureum]
gi|325084186|gb|EGC37620.1| hypothetical protein DICPUDRAFT_149785 [Dictyostelium purpureum]
Length = 877
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVD 69
P T ER++K F+ YG++ H + + AF+ F T E A K+LE +++K+ D
Sbjct: 674 PFETSERELKELFDKYGDIKHTALVLDRNGKSKGLAFITFATHEMAQKSLE-LNQTKVGD 732
Query: 70 RVISVEYA 77
R ISV++A
Sbjct: 733 RPISVQFA 740
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
T+FV DP T E +K+ F PYG +++V+I + FVQ+ + A +A+ + S+
Sbjct: 34 TVFVGGLDPSVTDEV-LKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ 92
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP 106
L + I + + +++ + + GY + P G P
Sbjct: 93 LGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDP 132
>gi|119628064|gb|EAX07659.1| splicing factor, arginine/serine-rich 4, isoform CRA_c [Homo
sapiens]
Length = 464
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALESTDRSK 66
T +V N P T + D+ F+ +G V+ R + R FAFV+ +T E A A+
Sbjct: 310 TCYVGNLTPYTT-QNDLIPLFQNFGFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYN 368
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGY---GRHSP--YGRSPSPAYRRRPSPDYGRG 121
+ R + + KD + D + GY G +P YG AY P YG
Sbjct: 369 VNGRPLKCSWG-KDKAPTQDGFPQGTPTGYSPQGGQTPGGYGSGAQSAYF----PQYGGM 423
Query: 122 RSPAYDRYNGPV 133
PA + GP+
Sbjct: 424 PQPAGPQSAGPM 435
>gi|344273957|ref|XP_003408785.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Loxodonta
africana]
Length = 271
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIKDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1
[Nomascus leucogenys]
Length = 494
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|426233598|ref|XP_004023549.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 5 [Ovis aries]
Length = 274
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGXIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|402853658|ref|XP_003891508.1| PREDICTED: serine/arginine-rich splicing factor 4 [Papio anubis]
Length = 494
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|119628063|gb|EAX07658.1| splicing factor, arginine/serine-rich 4, isoform CRA_b [Homo
sapiens]
gi|158256450|dbj|BAF84198.1| unnamed protein product [Homo sapiens]
Length = 494
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|348571040|ref|XP_003471304.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Cavia
porcellus]
Length = 497
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 9/85 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNV--------LHVRIRRNFAFVQFETQ 52
+ P L V RT +RD++ F YG + H R R FAFV F
Sbjct: 69 AGDNNPGNNLHVSGLS-NRTTDRDLEDAFGKYGAIERAQVMYDPHSREPRGFAFVTFVKA 127
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
E+A A+ + + ++ + R I+V+ A
Sbjct: 128 EDAEAAITAMNGTEFLGRKITVDKA 152
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|327280352|ref|XP_003224916.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Anolis
carolinensis]
Length = 261
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV P RERD+++ F+ YG + + ++ F FV+FE +A A+ + +L +
Sbjct: 6 VFVGRLSP-HARERDVEKFFKGYGRIREINLKNGFGFVEFEDHRDADDAVYELNGKELCN 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|327297170|ref|XP_003233279.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
gi|326464585|gb|EGD90038.1| hypothetical protein TERG_06272 [Trichophyton rubrum CBS 118892]
Length = 301
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEA 55
Q LFV P R E D+ R FE YG V H + R F FV T ++A
Sbjct: 63 QNTGTNLFVTGIHP-RLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMATPDQA 121
Query: 56 TKALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 122 EAAREGLQGEVIDGRTLSIEKA 143
>gi|331218002|ref|XP_003321679.1| hypothetical protein PGTG_03216 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300669|gb|EFP77260.1| hypothetical protein PGTG_03216 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 217
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATK 57
P L V ++ +RD++ F YG V H R R F FV ET ++A
Sbjct: 32 PGNNLHVSGIS-LKADDRDLEELFSKYGTVTKSQLMRDPHTREIRGFGFVTMETSDQAEL 90
Query: 58 ALESTDRSKLVDRVISVEYA 77
A+ S + ++ + + +SVE A
Sbjct: 91 AISSLNGTEFLGKTLSVEKA 110
>gi|293334639|ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
gi|224031469|gb|ACN34810.1| unknown [Zea mays]
gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
gi|414887661|tpg|DAA63675.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 246
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG ++ + I R FAFV+++ ++EA
Sbjct: 14 RDTYSLLVLNIT-FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 72
Query: 57 KALESTDRSKLVD-RVISVEYA 77
KA+E D +LVD R I V++A
Sbjct: 73 KAVERLD-GRLVDGREIMVQFA 93
>gi|410930984|ref|XP_003978877.1| PREDICTED: uncharacterized protein LOC101068731 [Takifugu
rubripes]
Length = 379
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG ++ + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHA 70
>gi|395730870|ref|XP_003775801.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 4 [Pongo abelii]
Length = 492
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|299755971|ref|XP_001829009.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
gi|298411464|gb|EAU92644.2| hypothetical protein CC1G_01689 [Coprinopsis cinerea okayama7#130]
Length = 439
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TR+ D++ F G ++++ ++ + FV+FE +E A +++E + + I
Sbjct: 89 IGGLPEHTRQEDLQNCFGKIGKIVNIELKVGYGFVEFENREAAEESVEKYHEGYFMGQKI 148
Query: 73 SVEYA 77
VE +
Sbjct: 149 RVELS 153
>gi|307133720|ref|NP_001182516.1| splicing factor, arginine/serine-rich 5 [Equus caballus]
Length = 271
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|344287504|ref|XP_003415493.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Loxodonta
africana]
Length = 500
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|432107111|gb|ELK32534.1| Serine/arginine-rich splicing factor 5 [Myotis davidii]
Length = 280
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|49204563|dbj|BAD24705.1| transformer-2b6 [Oryzias latipes]
Length = 184
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 12 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 70
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 71 DAKEAKEKANGMELDGRRIRVDFSI 95
>gi|157278159|ref|NP_001098179.1| transformer 2b isoform 5 [Oryzias latipes]
gi|49204555|dbj|BAD24704.1| transformer-2b5 [Oryzias latipes]
Length = 183
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 12 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 70
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 71 DAKEAKEKANGMELDGRRIRVDFSI 95
>gi|356524836|ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
Length = 267
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRMVDGREITVQFA 92
>gi|348573304|ref|XP_003472431.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Cavia
porcellus]
Length = 273
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|291410875|ref|XP_002721708.1| PREDICTED: splicing factor, arginine/serine-rich 5 [Oryctolagus
cuniculus]
Length = 275
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|291400295|ref|XP_002716399.1| PREDICTED: splicing factor, arginine/serine-rich 10 [Oryctolagus
cuniculus]
Length = 240
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 64 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 122
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 123 DAKEAKERANGMELDGRRIRVDFSI 147
>gi|212723432|ref|NP_001132009.1| uncharacterized protein LOC100193414 [Zea mays]
gi|194693184|gb|ACF80676.1| unknown [Zea mays]
gi|413942172|gb|AFW74821.1| hypothetical protein ZEAMMB73_961242 [Zea mays]
gi|448878186|gb|AGE46056.1| arginine/serine-rich splicing factor RS2Z35 transcript I [Zea
mays]
Length = 314
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L+V P RTR RD++ F YG + V ++R++AF++F +A A + D ++
Sbjct: 13 LYVGRLAP-RTRSRDLEYLFSKYGRIREVELKRDYAFIEFSDPRDADDAQYNLDGREVDG 71
Query: 70 RVISVEYA 77
I VE+A
Sbjct: 72 SRIIVEFA 79
>gi|431894401|gb|ELK04201.1| Splicing factor, arginine/serine-rich 6 [Pteropus alecto]
Length = 343
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|392568994|gb|EIW62168.1| RNA-binding domain-containing protein, partial [Trametes
versicolor FP-101664 SS1]
Length = 211
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI---------RRNFAFVQFETQEEAT 56
P+ L V IRT ERD+ F +G V V I R F F+ T +EA
Sbjct: 5 PSNVLGVFGLS-IRTTERDLDDEFSRFGRVEKVVIVYDQRQSDRSRGFGFITMSTTDEAG 63
Query: 57 KALESTDRSKLVDRVISVEYALKD 80
+ ++ + +L R I V+Y++ D
Sbjct: 64 RCIKELNGVELNGRRIRVDYSVTD 87
>gi|403164040|ref|XP_003324121.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164717|gb|EFP79702.2| hypothetical protein PGTG_06023 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 294
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 27/123 (21%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
+PT L V IRTRE D++ F YG V V I R F FV ++A+
Sbjct: 59 QPTNVLGVFGLS-IRTREADLEAEFSRYGKVEKVVIVYDQRSDRSRGFGFVTMRDVQDAS 117
Query: 57 KALESTDRSKLVDRVISVEYAL----------------KDDSERD--DRYDSPRRGGYGR 98
+ + L R I V+Y++ +++ ER DR+ P G+GR
Sbjct: 118 ACISELNGLDLHGRPIRVDYSVTTKPHQPTPGQYMGSKREEDERAGYDRWGGPPPHGFGR 177
Query: 99 HSP 101
P
Sbjct: 178 GPP 180
>gi|403351671|gb|EJY75331.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
gi|403370539|gb|EJY85135.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 343
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD-RVISVEYA 77
RTRE D+K F +G + + ++ N+AF+ +E E+A AL + V+ ++VE +
Sbjct: 104 RTREDDLKDSFSKFGRIKQLVLKHNYAFIDYENHEDAVAALREMNGKTFVNGEELAVEQS 163
Query: 78 L 78
+
Sbjct: 164 V 164
>gi|307438|gb|AAA36649.1| pre-mRNA splicing factor [Homo sapiens]
Length = 494
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|395536427|ref|XP_003770219.1| PREDICTED: transformer-2 protein homolog beta-like [Sarcophilus
harrisii]
Length = 288
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|189055016|dbj|BAG38000.1| unnamed protein product [Homo sapiens]
Length = 288
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|409038919|gb|EKM48719.1| hypothetical protein PHACADRAFT_266187 [Phanerochaete carnosa
HHB-10118-sp]
Length = 242
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEA 55
Q P L V + R RD+++ F G V H R R F FV ET EEA
Sbjct: 69 QNPGNNLHVSSLS-SRVDTRDLEQAFAKIGRVKKAQVMYDPHTRESRGFGFVTMETAEEA 127
Query: 56 TKALESTDRSKLVDRVISVEYA 77
A+ + + + L+ + ++V A
Sbjct: 128 DAAVTALNNADLMGKTMTVTKA 149
>gi|395856813|ref|XP_003800813.1| PREDICTED: serine/arginine-rich splicing factor 4 [Otolemur
garnettii]
Length = 503
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 70
>gi|335307313|ref|XP_003360793.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Sus
scrofa]
Length = 221
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|126291113|ref|XP_001371339.1| PREDICTED: serine/arginine-rich splicing factor 6-like
[Monodelphis domestica]
Length = 340
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
T+FV DP T E +K+ F PYG +++V+I + FVQ+ + A +A+ + S+
Sbjct: 269 TVFVGGLDPSVTDEV-LKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ 327
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS--PDYGRGRSP 124
L + I + + +++ + + GY + P G P Y R P Y P
Sbjct: 328 LGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPY-GYVRPPQDPAMYAYAAYP 386
Query: 125 AYDRY 129
Y Y
Sbjct: 387 GYGNY 391
>gi|417398268|gb|JAA46167.1| Putative serine/arginine-rich splicing factor 5 [Desmodus
rotundus]
Length = 278
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNP-SAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|348582426|ref|XP_003476977.1| PREDICTED: transformer-2 protein homolog beta-like [Cavia
porcellus]
Length = 337
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 158 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 216
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 217 DAKEAKERANGMELDGRRIRVDFSI 241
>gi|367016463|ref|XP_003682730.1| hypothetical protein TDEL_0G01520 [Torulaspora delbrueckii]
gi|359750393|emb|CCE93519.1| hypothetical protein TDEL_0G01520 [Torulaspora delbrueckii]
Length = 724
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LF+ N + D+ R F PYG++L + I+ F F+Q+ + A++S +
Sbjct: 263 PKSRLFIGNLPLKNVSKEDLFRIFSPYGHILQINIKNAFGFIQYNNPQSVRNAIQSESQE 322
Query: 66 KLVDRVISVEYA 77
+ + + +E +
Sbjct: 323 QNFGKKLILEIS 334
>gi|90078208|dbj|BAE88784.1| unnamed protein product [Macaca fascicularis]
Length = 288
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|307133730|ref|NP_001182521.1| splicing factor, arginine/serine-rich 5 [Pongo abelii]
gi|109084084|ref|XP_001109903.1| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 2
[Macaca mulatta]
gi|297298154|ref|XP_001110094.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 3
[Macaca mulatta]
gi|297298156|ref|XP_001110146.2| PREDICTED: splicing factor, arginine/serine-rich 5 isoform 4
[Macaca mulatta]
gi|119601409|gb|EAW81003.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Homo
sapiens]
Length = 271
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|149643059|ref|NP_001092399.1| serine/arginine-rich splicing factor 5 [Bos taurus]
gi|73963391|ref|XP_867135.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 9
[Canis lupus familiaris]
gi|301763317|ref|XP_002917076.1| PREDICTED: splicing factor, arginine/serine-rich 5-like
[Ailuropoda melanoleuca]
gi|345803610|ref|XP_867196.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 15
[Canis lupus familiaris]
gi|410962543|ref|XP_003987828.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Felis catus]
gi|410962545|ref|XP_003987829.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Felis catus]
gi|410962547|ref|XP_003987830.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 3
[Felis catus]
gi|148878097|gb|AAI46186.1| SFRS5 protein [Bos taurus]
gi|281349392|gb|EFB24976.1| hypothetical protein PANDA_005250 [Ailuropoda melanoleuca]
gi|296482956|tpg|DAA25071.1| TPA: splicing factor, arginine/serine-rich 5 [Bos taurus]
gi|440897364|gb|ELR49075.1| Serine/arginine-rich splicing factor 5 [Bos grunniens mutus]
Length = 272
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|86991438|ref|NP_001034554.1| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|86991440|ref|NP_008856.2| serine/arginine-rich splicing factor 5 [Homo sapiens]
gi|296215383|ref|XP_002754098.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Callithrix jacchus]
gi|332229001|ref|XP_003263676.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Nomascus leucogenys]
gi|332229003|ref|XP_003263677.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Nomascus leucogenys]
gi|332842591|ref|XP_510034.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 6 [Pan
troglodytes]
gi|332842593|ref|XP_001143701.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Pan
troglodytes]
gi|390469250|ref|XP_002754097.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Callithrix jacchus]
gi|397507326|ref|XP_003824150.1| PREDICTED: serine/arginine-rich splicing factor 5 [Pan paniscus]
gi|403264529|ref|XP_003924530.1| PREDICTED: serine/arginine-rich splicing factor 5 [Saimiri
boliviensis boliviensis]
gi|426377318|ref|XP_004055414.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Gorilla gorilla gorilla]
gi|426377320|ref|XP_004055415.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Gorilla gorilla gorilla]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|1049080|gb|AAA93070.1| SRp40-1 [Homo sapiens]
gi|17511888|gb|AAH18823.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|30583017|gb|AAP35752.1| splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|61362109|gb|AAX42162.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|61362114|gb|AAX42163.1| splicing factor arginine/serine-rich 5 [synthetic construct]
gi|71297198|gb|AAH40209.1| Splicing factor, arginine/serine-rich 5 [Homo sapiens]
gi|90075796|dbj|BAE87578.1| unnamed protein product [Macaca fascicularis]
gi|119601408|gb|EAW81002.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601411|gb|EAW81005.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|119601412|gb|EAW81006.1| splicing factor, arginine/serine-rich 5, isoform CRA_a [Homo
sapiens]
gi|208967490|dbj|BAG73759.1| splicing factor, arginine/serine-rich 5 [synthetic construct]
gi|355693393|gb|EHH27996.1| hypothetical protein EGK_18328 [Macaca mulatta]
gi|355778697|gb|EHH63733.1| hypothetical protein EGM_16760 [Macaca fascicularis]
gi|380815560|gb|AFE79654.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815562|gb|AFE79655.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|380815564|gb|AFE79656.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420727|gb|AFH33577.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420729|gb|AFH33578.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|383420731|gb|AFH33579.1| serine/arginine-rich splicing factor 5 [Macaca mulatta]
gi|410218428|gb|JAA06433.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410218430|gb|JAA06434.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252412|gb|JAA14173.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410252414|gb|JAA14174.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303912|gb|JAA30556.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410303914|gb|JAA30557.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357772|gb|JAA44585.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410357774|gb|JAA44586.1| serine/arginine-rich splicing factor 5 [Pan troglodytes]
gi|410358000|gb|JAA44587.1| splicing factor, arginine/serine-rich 5 [Pan troglodytes]
Length = 272
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|119226243|ref|NP_001073162.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226245|ref|NP_033185.2| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|119226247|ref|NP_001073163.1| serine/arginine-rich splicing factor 5 [Mus musculus]
gi|158631248|ref|NP_062130.2| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774128|ref|NP_001182434.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|306774130|ref|NP_001182435.1| serine/arginine-rich splicing factor 5 [Rattus norvegicus]
gi|354472150|ref|XP_003498303.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Cricetulus griseus]
gi|1168968|sp|Q09167.1|SRSF5_RAT RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Insulin-induced growth response protein CL-4;
AltName: Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName:
Full=Delayed-early protein HRS; AltName:
Full=Pre-mRNA-splicing factor SRP40; AltName:
Full=Splicing factor, arginine/serine-rich 5
gi|349079|gb|AAA62266.1| growth response protein [Rattus norvegicus]
gi|34849628|gb|AAH58479.1| Sfrs5 protein [Rattus norvegicus]
gi|52139013|gb|AAH82593.1| Splicing factor, arginine/serine-rich 5 (SRp40, HRS) [Mus
musculus]
gi|74144656|dbj|BAE27313.1| unnamed protein product [Mus musculus]
gi|148670738|gb|EDL02685.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670740|gb|EDL02687.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670743|gb|EDL02690.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670745|gb|EDL02692.1| mCG7614, isoform CRA_a [Mus musculus]
gi|148670746|gb|EDL02693.1| mCG7614, isoform CRA_a [Mus musculus]
gi|149025034|gb|EDL81401.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|149025037|gb|EDL81404.1| splicing factor, arginine/serine-rich 5, isoform CRA_b [Rattus
norvegicus]
gi|344235744|gb|EGV91847.1| Splicing factor, arginine/serine-rich 5 [Cricetulus griseus]
Length = 269
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|335292735|ref|XP_001927454.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1 [Sus
scrofa]
gi|335292737|ref|XP_001927469.2| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2 [Sus
scrofa]
Length = 272
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|12841460|dbj|BAB25217.1| unnamed protein product [Mus musculus]
gi|148670741|gb|EDL02688.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670742|gb|EDL02689.1| mCG7614, isoform CRA_c [Mus musculus]
gi|148670747|gb|EDL02694.1| mCG7614, isoform CRA_c [Mus musculus]
Length = 270
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--RRNFAFVQFETQEEATKALESTDRSK 66
T+FV DP T E +K+ F PYG +++V+I + FVQ+ + A +A+ + S+
Sbjct: 269 TVFVGGLDPSVTDEV-LKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQ 327
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPS--PDYGRGRSP 124
L + I + + +++ + + GY + P G P Y R P Y P
Sbjct: 328 LGGQSIRLSWGRSPGNKQPQQDQNQWNAGYYGYPPQGYDPY-GYVRPPQDPAMYAYAAYP 386
Query: 125 AYDRY 129
Y Y
Sbjct: 387 GYGNY 391
>gi|355559800|gb|EHH16528.1| hypothetical protein EGK_11817, partial [Macaca mulatta]
gi|355746830|gb|EHH51444.1| hypothetical protein EGM_10813, partial [Macaca fascicularis]
Length = 288
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|351708666|gb|EHB11585.1| Splicing factor, arginine/serine-rich 5 [Heterocephalus glaber]
Length = 270
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 78 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 136
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 137 DAKEAKERANGMELDGRRIRVDFSI 161
>gi|149242977|ref|XP_001526491.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450614|gb|EDK44870.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 356
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 23/155 (14%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T E +++ HF G++ +R+ + FAF+ F+ +E A
Sbjct: 161 PSRILFVGNL-GFDTTEDNLEEHFRHCGDIARIRMATFQDTGKCKGFAFIDFKKEEGAVA 219
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPR----RGGYGRHSPYG-----RSPSP 108
A+ S +++R + +EY +R + + R GG G + G R P
Sbjct: 220 AMNSKLTKMMLNRKLRLEYGEDRSKKRPKSHTNGRPSEFTGGEGEEAARGDLLAPRISKP 279
Query: 109 AYRRRPS---PDYG--RGRSPAYDRYNGPVYDQRR 138
YR R D G RG+ +Y+ + YD+R+
Sbjct: 280 QYRERGQDRGQDRGQDRGQDRSYENQHERSYDRRQ 314
>gi|4759098|ref|NP_004584.1| transformer-2 protein homolog beta isoform 1 [Homo sapiens]
gi|6677975|ref|NP_033212.1| transformer-2 protein homolog beta [Mus musculus]
gi|16923966|ref|NP_476460.1| transformer-2 protein homolog beta [Rattus norvegicus]
gi|77736495|ref|NP_001029948.1| transformer-2 protein homolog beta [Bos taurus]
gi|116175275|ref|NP_001070689.1| transformer-2 protein homolog beta [Sus scrofa]
gi|386780576|ref|NP_001248265.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|114590871|ref|XP_530672.2| PREDICTED: transformer-2 protein homolog beta isoform 3 [Pan
troglodytes]
gi|194222668|ref|XP_001497871.2| PREDICTED: transformer-2 protein homolog beta-like isoform 1 [Equus
caballus]
gi|296224784|ref|XP_002758193.1| PREDICTED: transformer-2 protein homolog beta [Callithrix jacchus]
gi|332215039|ref|XP_003256645.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Nomascus
leucogenys]
gi|345796409|ref|XP_535833.3| PREDICTED: transformer-2 protein homolog beta [Canis lupus
familiaris]
gi|354484188|ref|XP_003504272.1| PREDICTED: transformer-2 protein homolog beta-like [Cricetulus
griseus]
gi|395839823|ref|XP_003792775.1| PREDICTED: transformer-2 protein homolog beta [Otolemur garnettii]
gi|397470084|ref|XP_003806663.1| PREDICTED: transformer-2 protein homolog beta [Pan paniscus]
gi|402860695|ref|XP_003894758.1| PREDICTED: transformer-2 protein homolog beta [Papio anubis]
gi|403270092|ref|XP_003927029.1| PREDICTED: transformer-2 protein homolog beta-like [Saimiri
boliviensis boliviensis]
gi|410970819|ref|XP_003991874.1| PREDICTED: transformer-2 protein homolog beta [Felis catus]
gi|426217758|ref|XP_004003119.1| PREDICTED: transformer-2 protein homolog beta [Ovis aries]
gi|426343199|ref|XP_004038202.1| PREDICTED: transformer-2 protein homolog beta isoform 1 [Gorilla
gorilla gorilla]
gi|51703329|sp|P62997.1|TRA2B_RAT RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=RA301; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703330|sp|P62995.1|TRA2B_HUMAN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; Short=hTRA2-beta; AltName:
Full=Splicing factor, arginine/serine-rich 10; AltName:
Full=Transformer-2 protein homolog B
gi|51703331|sp|P62996.1|TRA2B_MOUSE RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Silica-induced gene 41
protein; Short=SIG-41; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|122143022|sp|Q3ZBT6.1|TRA2B_BOVIN RecName: Full=Transformer-2 protein homolog beta; Short=TRA-2 beta;
Short=TRA2-beta; AltName: Full=Splicing factor,
arginine/serine-rich 10; AltName: Full=Transformer-2
protein homolog B
gi|1255683|dbj|BAA08556.1| RNA binding protein (transformer-2-like) [Rattus norvegicus]
gi|1279558|emb|CAA56518.1| SIG41 [Mus musculus]
gi|1418286|gb|AAC28242.1| htra2-beta [Homo sapiens]
gi|1553035|gb|AAB08701.1| transformer-2 beta [Homo sapiens]
gi|4377848|gb|AAD19277.1| transformer-2-beta isoform 1 [Homo sapiens]
gi|12652815|gb|AAH00160.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|12653363|gb|AAH00451.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|13543480|gb|AAH05898.1| Transformer 2 beta homolog (Drosophila) [Homo sapiens]
gi|26340312|dbj|BAC33819.1| unnamed protein product [Mus musculus]
gi|38174351|gb|AAH61177.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Mus musculus]
gi|47477836|gb|AAH70948.1| Splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|73586673|gb|AAI03114.1| Transformer 2 beta homolog (Drosophila) [Bos taurus]
gi|115371737|gb|ABI96193.1| TRA2B [Sus scrofa]
gi|119598612|gb|EAW78206.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_b [Homo sapiens]
gi|123980068|gb|ABM81863.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|148665208|gb|EDK97624.1| mCG127344, isoform CRA_a [Mus musculus]
gi|149019900|gb|EDL78048.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [Rattus norvegicus]
gi|157928074|gb|ABW03333.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) [synthetic construct]
gi|296491312|tpg|DAA33375.1| TPA: transformer-2 protein homolog beta [Bos taurus]
gi|307685141|dbj|BAJ20501.1| transformer 2 beta homolog [synthetic construct]
gi|344239811|gb|EGV95914.1| Transformer-2 protein-like beta [Cricetulus griseus]
gi|380815584|gb|AFE79666.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|383420761|gb|AFH33594.1| transformer-2 protein homolog beta [Macaca mulatta]
gi|410211132|gb|JAA02785.1| transformer 2 beta homolog [Pan troglodytes]
gi|410264594|gb|JAA20263.1| transformer 2 beta homolog [Pan troglodytes]
gi|410302962|gb|JAA30081.1| transformer 2 beta homolog [Pan troglodytes]
Length = 288
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|414887662|tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
Length = 207
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG ++ + I R FAFV+++ ++EA
Sbjct: 14 RDTYSLLVLNI-TFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 72
Query: 57 KALESTDRSKLVD-RVISVEYA 77
KA+E D +LVD R I V++A
Sbjct: 73 KAVERLD-GRLVDGREIMVQFA 93
>gi|402876562|ref|XP_003902030.1| PREDICTED: serine/arginine-rich splicing factor 5 [Papio anubis]
Length = 272
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|47221305|emb|CAG13241.1| unnamed protein product [Tetraodon nigroviridis]
Length = 315
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ + P RERD+++ F+ YG + + ++ F FV+F+ +A A+ + +L
Sbjct: 6 VFIGHLSP-HARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGKELCS 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|417399301|gb|JAA46673.1| Putative serine/arginine-rich splicing factor 6 [Desmodus
rotundus]
Length = 345
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L + ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|410906739|ref|XP_003966849.1| PREDICTED: RNA-binding protein 4.1-like [Takifugu rubripes]
Length = 343
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+Q P K + + N + + +++++ FE YG V I +NFAFV EEA A++
Sbjct: 74 GHQGPVK-IHIANVE--KGFDKELRELFEEYGTVSECAIVKNFAFVHMPNSEEAMDAIQG 130
Query: 62 TDRSKLVDRVISVEYA 77
D S+ + I V+ +
Sbjct: 131 LDNSEFQGKRIHVQIS 146
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P T + +++ F YG V +N+AFV E ++ ATKA+ KL
Sbjct: 4 IFIGNLSP-ETEKDEVEALFVQYGTVTECAKYKNYAFVHMEDRKSATKAIRELHLHKLNG 62
Query: 70 RVISVEYA 77
R I+VE +
Sbjct: 63 RPINVELS 70
>gi|327281934|ref|XP_003225700.1| PREDICTED: serine/arginine-rich splicing factor 5-like [Anolis
carolinensis]
Length = 266
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|118484490|gb|ABK94120.1| unknown [Populus trichocarpa]
Length = 302
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ EEA
Sbjct: 13 RDTFSLLVLNI-TFRTTADDLFPLFDKYGKVVDVFIPRDRRTGESRGFAFVRYKYAEEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDRLDGRVVDGREIMVQFA 92
>gi|402219133|gb|EJT99207.1| hypothetical protein DACRYDRAFT_23817 [Dacryopinax sp. DJM-731 SS1]
Length = 319
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
+K +++ P ++DI++ FE YG + +RI F FV+FE ++A + +
Sbjct: 3 SKRIYIGKM-PRDAMKQDIEKFFEGYGRIQDIRIMNGFGFVEFENPKDAEDVVANFQGKN 61
Query: 67 LVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
L+ I +E A + ER GG+ P + P YR
Sbjct: 62 LLGEPIIIELAKESRRERG--------GGFEERGPRPFTRRPGYR 98
>gi|351709599|gb|EHB12518.1| Transformer-2 protein-like protein beta [Heterocephalus glaber]
Length = 290
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALESTDRSKLVDRVISVE 75
T ER + HF YG + ++R+ +AF++++ +++A AL++ + + L++ ISVE
Sbjct: 12 TTERHLNDHFSKYGTITRNDVKRSNGRCYAFIEYKEKKDADDALKALNGTTLLNSKISVE 71
Query: 76 YA 77
+A
Sbjct: 72 WA 73
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 1 MTDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 58
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + S+L+ + VE +
Sbjct: 59 ACDILNGSELLGSQLRVEIS 78
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 76 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 134
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 135 DAKEAKERANGMELDGRRIRVDFSI 159
>gi|387019387|gb|AFJ51811.1| Transformer-2 protein [Crotalus adamanteus]
Length = 187
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE+ +
Sbjct: 12 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFESVD 70
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 71 DAKEAKERANGMELDGRRIRVDFSI 95
>gi|395504171|ref|XP_003756430.1| PREDICTED: serine/arginine-rich splicing factor 5 [Sarcophilus
harrisii]
Length = 266
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|126282694|ref|XP_001370225.1| PREDICTED: serine/arginine-rich splicing factor 5-like
[Monodelphis domestica]
Length = 265
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|218192960|gb|EEC75387.1| hypothetical protein OsI_11855 [Oryza sativa Indica Group]
Length = 218
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R + +L V+N RT D+ F+ G VL +RI R FAFV+++ ++EA
Sbjct: 13 RDSYSLLVLNV-SFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDKLDGRTVDGRDIMVQFA 92
>gi|444726902|gb|ELW67417.1| RNA-binding protein 28 [Tupaia chinensis]
Length = 733
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F +G VL V I R FAFVQF+ EA KAL+ + ++ R+
Sbjct: 124 KCSEDDLKTLFTQFGTVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKGMNMKEIKGRM 183
Query: 72 ISVEYALKDDSERDDRYDSPRRGGYGRHSP 101
++V++A+ D +D + S G P
Sbjct: 184 VAVDWAVAKDKYKDTQSASAPVGQEKNSEP 213
>gi|238484361|ref|XP_002373419.1| arginine/serine-rich splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|220701469|gb|EED57807.1| arginine/serine-rich splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|391871889|gb|EIT81038.1| arginine/serine-rich splicing factor, putative [Aspergillus oryzae
3.042]
Length = 900
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF +AL+ + +
Sbjct: 422 LFVGNLPTERVTKRDLFHIFHKYGKLAQISIKQAYGFIQFLEAPACKQALDVEQGAVVRG 481
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPA---- 125
R + +E + P+R +P S +P RR SP+Y RG P+
Sbjct: 482 RKVHLEIS------------KPQRNTRPGPAPAEPSRAPPARRSRSPEYSRGGPPSSRNP 529
Query: 126 ---YDRYNGPVYDQRRSP 140
DRY+ P Y+ R P
Sbjct: 530 RAPTDRYDRP-YESPRVP 546
>gi|168007043|ref|XP_001756218.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692728|gb|EDQ79084.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R E+D+ HF G V+ R+ R F FV + ++A +
Sbjct: 15 PGNNLYVTGLS-TRVTEKDLDEHFSREGKVVECRLVVDPRTRESRGFGFVTMDNADDADR 73
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ +RS L R+I+VE A
Sbjct: 74 CVKYLNRSTLEGRIITVEKA 93
>gi|108708538|gb|ABF96333.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
Length = 206
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R + +L V+N RT D+ F+ G VL +RI R FAFV+++ ++EA
Sbjct: 13 RDSYSLLVLNV-SFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDKLDGRTVDGRDIMVQFA 92
>gi|115453325|ref|NP_001050263.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|50582745|gb|AAT78815.1| putative splicing factor (having alternative splicing products)
[Oryza sativa Japonica Group]
gi|108708536|gb|ABF96331.1| Arginine/serine-rich splicing factor, putative, expressed [Oryza
sativa Japonica Group]
gi|113548734|dbj|BAF12177.1| Os03g0388000 [Oryza sativa Japonica Group]
gi|222625042|gb|EEE59174.1| hypothetical protein OsJ_11097 [Oryza sativa Japonica Group]
Length = 205
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R + +L V+N RT D+ F+ G VL +RI R FAFV+++ ++EA
Sbjct: 13 RDSYSLLVLNV-SFRTTADDLLALFDRCGEVLDIRIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAVDKLDGRTVDGRDIMVQFA 92
>gi|83766068|dbj|BAE56211.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 900
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 20/138 (14%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF +AL+ + +
Sbjct: 422 LFVGNLPTERVTKRDLFHIFHKYGKLAQISIKQAYGFIQFLEAPACKQALDVEQGAVVRG 481
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPA---- 125
R + +E + P+R +P S +P RR SP+Y RG P+
Sbjct: 482 RKVHLEIS------------KPQRNTRPGPAPAEPSRAPPARRSRSPEYSRGGPPSSRNP 529
Query: 126 ---YDRYNGPVYDQRRSP 140
DRY+ P Y+ R P
Sbjct: 530 RAPTDRYDRP-YESPRVP 546
>gi|47575808|ref|NP_001001248.1| arginine/serine-rich splicing factor 4 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|45872604|gb|AAH68213.1| splicing factor, arginine/serine-rich 6 [Xenopus (Silurana)
tropicalis]
Length = 568
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFGGYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|449282696|gb|EMC89507.1| RNA-binding protein 28, partial [Columba livia]
Length = 522
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 22 ERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74
E D++ F P+G +L V I R FAFVQF+ EA KAL + + R ++V
Sbjct: 4 EDDLRSLFSPFGTILEVNIPKKPDGKMRGFAFVQFQKVLEAAKALRGMNMRDIKGRPVAV 63
Query: 75 EYALKDDSERDDRYD 89
++A+ D + R D
Sbjct: 64 DWAVAKDKYQATRGD 78
>gi|448111186|ref|XP_004201783.1| Piso0_001984 [Millerozyma farinosa CBS 7064]
gi|359464772|emb|CCE88477.1| Piso0_001984 [Millerozyma farinosa CBS 7064]
Length = 442
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T E ++ HF+ +G+++ +R+ + FAF+ + + T+
Sbjct: 271 PSRVLFVGNL-SFDTTEELLRTHFKTFGDIVRIRMATFEDSGKCKGFAFIDYRDETGPTE 329
Query: 58 ALESTDRSKLVDRVISVEYA 77
AL+S KLV R + +EY
Sbjct: 330 ALKSKFAKKLVKRTLRLEYG 349
>gi|350408075|ref|XP_003488293.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Bombus impatiens]
Length = 418
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TRERD++R F YG V I+ + FV+F+ +A A+ + +L+ I+VE
Sbjct: 65 PYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVER 124
Query: 77 ALKDDSERDDRYDSPRRGGYG 97
A D RGGYG
Sbjct: 125 ARGTPRGSDQWRYGDSRGGYG 145
>gi|294945440|ref|XP_002784681.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239897866|gb|EER16477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 463
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 11 FVINFDPIRTRERDIKRHFEPYGNVLHVRI----RRNFAFVQFETQEEATKALESTDRSK 66
I P RE +++ F G V+ V+I R +AF+QF+++ A A+E D++K
Sbjct: 153 IWIGGLPSDVREAELEDRFGKIGRVVGVKICQSSRDTYAFLQFDSETAAADAIEDVDQTK 212
Query: 67 LVDRVISVEYALKDDSE 83
I V +A + +E
Sbjct: 213 FGGFTIKVAHATRQSTE 229
>gi|119598613|gb|EAW78207.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_c [Homo sapiens]
Length = 289
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|395505264|ref|XP_003756963.1| PREDICTED: serine/arginine-rich splicing factor 6 isoform 1
[Sarcophilus harrisii]
Length = 340
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|194373907|dbj|BAG62266.1| unnamed protein product [Homo sapiens]
Length = 138
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|55153889|gb|AAH85267.1| Sfrs5 protein [Mus musculus]
gi|194382214|dbj|BAG58862.1| unnamed protein product [Homo sapiens]
Length = 124
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|395849594|ref|XP_003797407.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Otolemur garnettii]
gi|395849596|ref|XP_003797408.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Otolemur garnettii]
Length = 270
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|348514746|ref|XP_003444901.1| PREDICTED: hypothetical protein LOC100690823 [Oreochromis
niloticus]
Length = 396
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG ++ + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHA 70
>gi|149025035|gb|EDL81402.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
gi|149025038|gb|EDL81405.1| splicing factor, arginine/serine-rich 5, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|384252135|gb|EIE25612.1| hypothetical protein COCSUDRAFT_83619, partial [Coccomyxa
subellipsoidea C-169]
Length = 207
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALE 60
T+FV N + T ER ++ FE YG VL ++ + F FV+F+ +A A++
Sbjct: 36 TIFVGNLN-HETSERRLREFFEEYGRVLSTKVVFNPETGRSKGFGFVKFDDARDAEDAIK 94
Query: 61 STDRSKLVDRVISVEYA 77
D + R I +A
Sbjct: 95 QADGQTMDGRTIKCNFA 111
>gi|255581357|ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528897|gb|EEF30895.1| serine/arginine rich splicing factor, putative [Ricinus communis]
Length = 257
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRVVDGREITVQFA 92
>gi|328786878|ref|XP_391860.4| PREDICTED: serine/arginine-rich splicing factor 4 [Apis mellifera]
Length = 419
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TRERD++R F YG V I+ + FV+F+ +A A+ + +L+ I+VE
Sbjct: 65 PYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVER 124
Query: 77 ALKDDSERDDRYDSPRRGGYG 97
A D RGGYG
Sbjct: 125 ARGTPRGSDQWRYGDSRGGYG 145
>gi|30583835|gb|AAP36166.1| Homo sapiens splicing factor, arginine/serine-rich 5 [synthetic
construct]
gi|60653861|gb|AAX29623.1| splicing factor arginine/serine-rich 5 [synthetic construct]
Length = 273
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|291510230|gb|ADE10071.1| RRM [Tremella fuciformis]
Length = 326
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
PT L V +RTRERD++ F YG V V I R F F+ T E+A
Sbjct: 117 PTNVLGVFGLS-VRTRERDLEDEFARYGEVEKVVIVYDQRTDRSRGFGFITMRTVEDAQL 175
Query: 58 ALESTDRSKLVDRVISVEYA 77
+E + L R + V+++
Sbjct: 176 CVEKLNGLLLHGRAVRVDFS 195
>gi|444513680|gb|ELV10430.1| RNA-binding protein 47 [Tupaia chinensis]
Length = 580
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVLAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|350408072|ref|XP_003488292.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Bombus impatiens]
Length = 394
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TRERD++R F YG V I+ + FV+F+ +A A+ + +L+ I+VE
Sbjct: 65 PYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVER 124
Query: 77 ALKDDSERDDRYDSPRRGGYG 97
A D RGGYG
Sbjct: 125 ARGTPRGSDQWRYGDSRGGYG 145
>gi|145500107|ref|XP_001436037.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403175|emb|CAK68640.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALES 61
P K L++ N + ++ D++ F+ YG + +++ +AFV+FE E+A +A S
Sbjct: 4 PKKKLWIGNL-AYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIEAYNS 62
Query: 62 TDRSKLVDRVISVEYALKDDSERDDRYDSPRRGG 95
+L + + +EYA +DR RGG
Sbjct: 63 LQGRELKGQAMKIEYASGRKRSTNDRDKERGRGG 96
>gi|335775542|gb|AEH58607.1| transformer-2 protein-like protein beta-like protein [Equus
caballus]
Length = 275
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 99 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 157
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 158 DAKEAKERANGMELDGRRIRVDFSI 182
>gi|383848642|ref|XP_003699957.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Megachile
rotundata]
Length = 418
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEY 76
P TRERD++R F YG V I+ + FV+F+ +A A+ + +L+ I+VE
Sbjct: 65 PYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYRDADDAVYELNGKELLGERITVER 124
Query: 77 ALKDDSERDDRYDSPRRGGYG 97
A D RGGYG
Sbjct: 125 ARGTPRGSDQWRYGDSRGGYG 145
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like
[Monodelphis domestica]
Length = 491
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDGSYGSG-RSGYG 87
>gi|451997220|gb|EMD89685.1| hypothetical protein COCHEDRAFT_1177492 [Cochliobolus
heterostrophus C5]
Length = 276
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P T E ++ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 66 NLFVTGIHPTLT-EDEVTRLFEKYGDVEQCNIMRDPHTKESRGFGFVKMVTAEQADNAKE 124
Query: 61 STDRSKLVDRVISVEYA 77
R +S+E A
Sbjct: 125 GLQGEVHQGRTLSIEKA 141
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 1 MTDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 58
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + S+L+ + VE +
Sbjct: 59 ACDILNGSELLGSQLRVEIS 78
>gi|451852456|gb|EMD65751.1| hypothetical protein COCSADRAFT_170220 [Cochliobolus sativus
ND90Pr]
Length = 276
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
LFV P T E ++ R FE YG+V H + R F FV+ T E+A A E
Sbjct: 66 NLFVTGIHPTLT-EDEVTRLFEKYGDVEQCNIMRDPHTKESRGFGFVKMVTAEQADNAKE 124
Query: 61 STDRSKLVDRVISVEYA 77
R +S+E A
Sbjct: 125 GLQGEVHQGRTLSIEKA 141
>gi|444315572|ref|XP_004178443.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
gi|387511483|emb|CCH58924.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
Length = 389
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQ 52
M+ P++ LFV N T E ++ HF+ G ++ +R + F+F+ F T+
Sbjct: 215 MSKNPPSRILFVGNLSYDTTDEL-LRSHFQHCGEIVKIRTATFEDTGKCKGFSFIDFLTE 273
Query: 53 EEATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRG 94
E ATKAL+ K+ R I +EY +D S+R R P+ G
Sbjct: 274 ESATKALKDKSCRKIAGRPIRMEYG-EDRSKRVVRSVRPKEG 314
>gi|325179763|emb|CCA14166.1| splicing factor putative [Albugo laibachii Nc14]
Length = 207
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNV--------LHVRIRRNFAFVQFETQEE 54
++R +L + N R R ++++ FE +G+V H R + FAFV+F+ + +
Sbjct: 2 SERSGISLLIRNISR-RMRSDELRKTFEEFGDVRDVYIPRDFHTREVKGFAFVEFKNERD 60
Query: 55 ATKALESTDRSKLVDRVISVEYA 77
A +AL + D S+L R I+V +A
Sbjct: 61 AEEALRNLDGSRLDGREITVVFA 83
>gi|207080144|ref|NP_001128783.1| DKFZP469N2326 protein [Pongo abelii]
gi|55727921|emb|CAH90713.1| hypothetical protein [Pongo abelii]
Length = 550
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 202 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 260
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 261 TELEGSCLEVTLAKPVDKEQYSRY 284
>gi|119601416|gb|EAW81010.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Homo
sapiens]
Length = 209
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|432882991|ref|XP_004074179.1| PREDICTED: uncharacterized protein LOC101163182 isoform 3
[Oryzias latipes]
Length = 388
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 70
>gi|426328680|ref|XP_004025378.1| PREDICTED: uncharacterized protein LOC101134512, partial [Gorilla
gorilla gorilla]
Length = 434
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 10 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHA 68
>gi|242089323|ref|XP_002440494.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|241945779|gb|EES18924.1| hypothetical protein SORBIDRAFT_09g001910 [Sorghum bicolor]
gi|448878296|gb|AGE46111.1| arginine/serine-rich splicing factor RS2Z39 [Sorghum bicolor]
Length = 341
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
L+V P RTR RD++ F YG + V ++R++AF++F +A +A D +
Sbjct: 13 LYVGRLAP-RTRSRDLEYLFGRYGRIREVELKRDYAFIEFSDHRDADEARYQLDGRDVDG 71
Query: 70 RVISVEYA 77
I VE+A
Sbjct: 72 SRIVVEFA 79
>gi|20450941|gb|AAM21973.1| RNA-binding protein [Homo sapiens]
Length = 593
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|260949537|ref|XP_002619065.1| hypothetical protein CLUG_00224 [Clavispora lusitaniae ATCC 42720]
gi|238846637|gb|EEQ36101.1| hypothetical protein CLUG_00224 [Clavispora lusitaniae ATCC 42720]
Length = 416
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T E +++ HF G+++ +R+ + FAF+ F+ + T
Sbjct: 245 PSRILFVGNLS-FDTTEDNLEEHFRHCGDIVRIRMATFEDTGKCKGFAFIDFKDESGPTA 303
Query: 58 ALESTDRSKLVDRVISVEYA 77
AL+S KL++R + +EY
Sbjct: 304 ALKSKLAKKLINRPLRLEYG 323
>gi|148665209|gb|EDK97625.1| mCG127344, isoform CRA_b [Mus musculus]
gi|417409256|gb|JAA51145.1| Putative ataxin 2-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 276
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 100 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 158
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 159 DAKEAKERANGMELDGRRIRVDFSI 183
>gi|51476162|emb|CAH18071.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 100 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 158
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 159 DAKEAKERANGMELDGRRIRVDFSI 183
>gi|350587465|ref|XP_003128987.3| PREDICTED: RNA-binding protein 47-like isoform 1 [Sus scrofa]
Length = 591
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|290992316|ref|XP_002678780.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
gi|284092394|gb|EFC46036.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase [Naegleria
gruberi]
Length = 492
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 16/105 (15%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P LFV +PI T E+ ++ F YGN++ I +N +AF++FE E +
Sbjct: 277 PDSVLFVCRLNPI-TSEKSLRTIFLQYGNIVKCEIVKNRKTGKSKTYAFIEFEDAESCER 335
Query: 58 ALESTDRSKLVDRVISVEYA-------LKDDSERDDRYDSPRRGG 95
A ++ + D I V+++ +++ E+ SP+R G
Sbjct: 336 AFLKSEGLVIDDHKIHVDFSQSIAHLWAQNEKEKKQAETSPQRHG 380
>gi|196004628|ref|XP_002112181.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
gi|190586080|gb|EDV26148.1| hypothetical protein TRIADDRAFT_23659 [Trichoplax adhaerens]
Length = 266
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKAL-ESTDRSKLVDRVISVEYA 77
R RERD++ F +G + V ++ F FV+F+ +A A+ E +R + +RVI VE+A
Sbjct: 12 RARERDVEHFFRGFGKIREVTLKNGFGFVEFDDPRDAEDAIYELNNRDLMGERVI-VEFA 70
Query: 78 LKDDSERDDRYDSPRRGGYGRHSP 101
+ RYD RRG Y +P
Sbjct: 71 ------KGTRYDD-RRGAYPLITP 87
>gi|340056333|emb|CCC50664.1| poly(A)-binding protein [Trypanosoma vivax Y486]
Length = 548
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHV--------RIRRNFAFVQFETQEEATKALES 61
L+V NFD T ER +K FE +G + V ++ R F FV F+ Q A++A++
Sbjct: 290 LYVKNFDDTVTSER-LKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQE 348
Query: 62 TDRSKLVD-RVISVEYALKDDSERDDRYD 89
S + R + V YAL+ D+ R D
Sbjct: 349 LHGSTALGPRPLFVTYALRKDARRQTLED 377
>gi|291224545|ref|XP_002732262.1| PREDICTED: splicing factor, arginine/serine-rich 4-like
[Saccoglossus kowalevskii]
Length = 274
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 14/91 (15%)
Query: 1 MANQRPTKTLFVI-NFDPI-------------RTRERDIKRHFEPYGNVLHVRIRRNFAF 46
+ + LFV+ N+ I +TRERD++R F YG + + ++ F F
Sbjct: 6 CLTSKSCRILFVVLNYTEITMGTRVYIGRLSYQTRERDVERFFRGYGRLREINLKNGFGF 65
Query: 47 VQFETQEEATKALESTDRSKLVDRVISVEYA 77
V+FE ++ A+ + +L +++E+A
Sbjct: 66 VEFEDPRDSDDAVYELNGKELCGERVTIEHA 96
>gi|55727108|emb|CAH90310.1| hypothetical protein [Pongo abelii]
Length = 593
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|332819357|ref|XP_001144567.2| PREDICTED: RNA-binding protein 47 isoform 1 [Pan troglodytes]
gi|402869222|ref|XP_003898665.1| PREDICTED: RNA-binding protein 47 isoform 4 [Papio anubis]
gi|426344164|ref|XP_004038645.1| PREDICTED: RNA-binding protein 47 isoform 3 [Gorilla gorilla
gorilla]
Length = 555
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 207 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 265
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 266 TELEGSCLEVTLAKPVDKEQYSRY 289
>gi|221044912|dbj|BAH14133.1| unnamed protein product [Homo sapiens]
Length = 555
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 207 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 265
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 266 TELEGSCLEVTLAKPVDKEQYSRY 289
>gi|397524566|ref|XP_003832261.1| PREDICTED: RNA-binding protein 47 isoform 4 [Pan paniscus]
Length = 555
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 207 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 265
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 266 TELEGSCLEVTLAKPVDKEQYSRY 289
>gi|348510881|ref|XP_003442973.1| PREDICTED: transformer-2 protein homolog beta-like [Oreochromis
niloticus]
Length = 290
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE E
Sbjct: 114 ANPDPNNCLGVFGLS-LYTTERDLREVFSKYGPLADVNIVYDQQSRRSRGFAFVYFENCE 172
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A E + +L R I V++++
Sbjct: 173 DSKEAKERANGMELDGRRIRVDFSI 197
>gi|148224986|ref|NP_001080148.1| splicing factor, arginine/serine-rich 6 [Xenopus laevis]
gi|28422195|gb|AAH44265.1| B52-prov protein [Xenopus laevis]
Length = 660
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 21 RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 14 REKDIQRFFGSYGKLLEVDLKNGYGFVEFEDSRDADDAVYELNGKDLCGERVIVEHA 70
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQ 52
+ P L V T ERD++ F YG + H R R FAFV +E
Sbjct: 67 TGDNNPGNNLHVSGLSKTTT-ERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEKA 125
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
E+A A+ + + S R I+V+ A
Sbjct: 126 EDAEAAITAMNGSDFQGRKITVDKA 150
>gi|448097167|ref|XP_004198604.1| Piso0_001984 [Millerozyma farinosa CBS 7064]
gi|359380026|emb|CCE82267.1| Piso0_001984 [Millerozyma farinosa CBS 7064]
Length = 439
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATK 57
P++ LFV N T E ++ HF+ +G+++ +R+ + FAF+ + + T+
Sbjct: 271 PSRVLFVGNL-SFDTTEELLRTHFKTFGDIVRIRMATFEDSGKCKGFAFIDYRDETGPTE 329
Query: 58 ALESTDRSKLVDRVISVEYA 77
AL+S KLV R + +EY
Sbjct: 330 ALKSKFAKKLVKRTLRLEYG 349
>gi|332219030|ref|XP_003258661.1| PREDICTED: RNA-binding protein 47 isoform 3 [Nomascus leucogenys]
Length = 555
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 207 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 265
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 266 TELEGSCLEVTLAKPVDKEQYSRY 289
>gi|219521533|gb|AAI43943.1| RNA binding motif protein 47 [Homo sapiens]
Length = 593
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPMDKEQYSRY 327
>gi|145531303|ref|XP_001451420.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419071|emb|CAK84023.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN----FAFVQFETQEEATKALES 61
P K L++ N + ++ D++ F+ YG + +++ +AFV+FE E+A A S
Sbjct: 4 PKKKLWIGNL-AYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIDAFNS 62
Query: 62 TDRSKLVDRVISVEYA 77
+L + + +EYA
Sbjct: 63 LQGRELKGQAMKIEYA 78
>gi|402220870|gb|EJU00940.1| hypothetical protein DACRYDRAFT_108285 [Dacryopinax sp. DJM-731
SS1]
Length = 491
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TR+ D++ F GNV+++ ++ + FV+F+ + A +A+ + + I
Sbjct: 72 IGGLPETTRDEDLQNCFGKLGNVVNIELKLGYGFVEFDNVKAAEEAVAKYNEGYFMGSKI 131
Query: 73 SVE 75
VE
Sbjct: 132 KVE 134
>gi|356512057|ref|XP_003524737.1| PREDICTED: uncharacterized protein LOC100804370 [Glycine max]
Length = 267
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRMVDGREITVQFA 92
>gi|329664912|ref|NP_001192963.1| RNA-binding protein 47 [Bos taurus]
gi|296486627|tpg|DAA28740.1| TPA: RNA binding motif protein 47 [Bos taurus]
gi|440900817|gb|ELR51867.1| RNA-binding protein 47 [Bos grunniens mutus]
Length = 591
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|326932930|ref|XP_003212564.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Meleagris
gallopavo]
Length = 475
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F+ YG +L V ++ + FV+F+ +A A+ + L + VE+A
Sbjct: 12 QARERDVERFFKGYGKILEVDLKNGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHAR 71
Query: 79 KDDSERDDRYDSPRRGGYG 97
RD Y S R GYG
Sbjct: 72 --GPRRDSSYGSG-RSGYG 87
>gi|315044427|ref|XP_003171589.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
gi|311343932|gb|EFR03135.1| RNA recognition domain-containing protein family protein
[Arthroderma gypseum CBS 118893]
Length = 305
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEA 55
Q LFV P R E D+ R FE YG V H + R F FV T ++A
Sbjct: 63 QNTGTNLFVTGIHP-RLSEADVTRLFEKYGEVENCSIMLDPHTKESRGFGFVNMVTPDQA 121
Query: 56 TKALESTDRSKLVDRVISVEYA 77
A E + R +S+E A
Sbjct: 122 EAAREGLQGEVIDGRTLSIEKA 143
>gi|432882987|ref|XP_004074177.1| PREDICTED: uncharacterized protein LOC101163182 isoform 1
[Oryzias latipes]
Length = 372
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 70
>gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzias latipes]
Length = 321
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD+K F YG + V I R FAFV FE
Sbjct: 125 ANPDPNACLGVFGLS-LYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTP 183
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 184 DAKEAKEKANGMELDGRRIRVDFSI 208
>gi|356549711|ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816831 [Glycine max]
Length = 934
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 6/121 (4%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--RNFAFVQFETQEEATKALE 60
N P++ L+V N E ++ HF YG + +V + R++AF+ F E+A AL
Sbjct: 38 NNPPSRHLWVGNLSH-NIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALR 96
Query: 61 STDRSKLVDRVISVEYALKDD---SERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPD 117
+ L + +E+A D + D+ Y R R SP+ + Y P P
Sbjct: 97 ALQGFPLAGNPLRIEFAKADKPSAMQHDEDYSWDERNSILRGSPFSQREFRGYHGSPEPH 156
Query: 118 Y 118
Y
Sbjct: 157 Y 157
>gi|344279159|ref|XP_003411358.1| PREDICTED: RNA-binding protein 47-like isoform 1 [Loxodonta
africana]
Length = 593
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 244 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 302
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 303 TELEGSCLEVTLAKPVDKEQYSRY 326
>gi|397524560|ref|XP_003832258.1| PREDICTED: RNA-binding protein 47 isoform 1 [Pan paniscus]
gi|397524562|ref|XP_003832259.1| PREDICTED: RNA-binding protein 47 isoform 2 [Pan paniscus]
Length = 593
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|327283237|ref|XP_003226348.1| PREDICTED: serine/arginine-rich splicing factor 6-like [Anolis
carolinensis]
Length = 343
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+D++R F YG +L V ++ + FV+FE +A A+ + L + VE+A
Sbjct: 13 VREKDLQRFFSGYGRLLEVDLKNGYGFVEFEDSRDAEDAVYELNGKDLCGERVIVEHA 70
>gi|426231613|ref|XP_004009833.1| PREDICTED: RNA-binding protein 47 [Ovis aries]
Length = 546
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 200 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNNLNG 258
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 259 TELEGSCLEVTLAKPVDKEQYSRY 282
>gi|160017954|sp|Q5R5P4.2|RBM47_PONAB RecName: Full=RNA-binding protein 47; AltName: Full=RNA-binding
motif protein 47
Length = 593
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|148833513|ref|NP_001092104.1| RNA-binding protein 47 isoform a [Homo sapiens]
gi|313104167|sp|A0AV96.2|RBM47_HUMAN RecName: Full=RNA-binding protein 47; AltName: Full=RNA-binding
motif protein 47
Length = 593
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|109074059|ref|XP_001095125.1| PREDICTED: RNA-binding protein 47 isoform 5 [Macaca mulatta]
gi|109074063|ref|XP_001095351.1| PREDICTED: RNA-binding protein 47 isoform 7 [Macaca mulatta]
gi|114593726|ref|XP_001145550.1| PREDICTED: RNA-binding protein 47 isoform 13 [Pan troglodytes]
gi|402869216|ref|XP_003898662.1| PREDICTED: RNA-binding protein 47 isoform 1 [Papio anubis]
gi|402869218|ref|XP_003898663.1| PREDICTED: RNA-binding protein 47 isoform 2 [Papio anubis]
gi|410038246|ref|XP_003950365.1| PREDICTED: RNA-binding protein 47 [Pan troglodytes]
gi|426344160|ref|XP_004038643.1| PREDICTED: RNA-binding protein 47 isoform 1 [Gorilla gorilla
gorilla]
gi|426344162|ref|XP_004038644.1| PREDICTED: RNA-binding protein 47 isoform 2 [Gorilla gorilla
gorilla]
gi|116496675|gb|AAI26262.1| RBM47 protein [Homo sapiens]
gi|313883194|gb|ADR83083.1| RNA binding motif protein 47 (RBM47), transcript variant 1
[synthetic construct]
gi|355687243|gb|EHH25827.1| RNA-binding motif protein 47 [Macaca mulatta]
gi|355749234|gb|EHH53633.1| RNA-binding motif protein 47 [Macaca fascicularis]
Length = 593
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|18203864|gb|AAH21715.1| Serine-arginine repressor protein (35 kDa) [Homo sapiens]
gi|123982510|gb|ABM82996.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
gi|123997175|gb|ABM86189.1| serine-arginine repressor protein (35 kDa) [synthetic construct]
Length = 261
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P +LF+ N TR D++R F YG ++ V I R FA+VQFE A
Sbjct: 8 PNTSLFIRNVADA-TRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRGAED 66
Query: 58 ALESTDRSKLVDRVISVEYALKD 80
AL + +R + R I +++A D
Sbjct: 67 ALYNLNRKWVCGRQIEIQFAQGD 89
>gi|348518315|ref|XP_003446677.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 1
[Oreochromis niloticus]
Length = 629
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K LFV N T E +++ F +G + V+ +++AF+ FE ++ A KALE + +
Sbjct: 337 VKVLFVRNLANGVTEEL-LEKSFSEFGKLERVKKLKDYAFIHFEERDGAVKALEEMNGKE 395
Query: 67 LVDRVISVEYALKDDSERDDR 87
L I + +A D +R +R
Sbjct: 396 LEGEPIEIVFAKPPDQKRKER 416
>gi|255732796|ref|XP_002551321.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
gi|240131062|gb|EER30623.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
Length = 409
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEA 55
P++ LFV ++FD T E +++ HF G++ +R+ + FAF+ F+ +E A
Sbjct: 214 PSRILFVGNLSFD---TTEDNLEEHFRHCGDITRIRMATFQDTGKCKGFAFIDFKNEEGA 270
Query: 56 TKALESTDRSKLVDRVISVEYA 77
T AL S ++R + +EY
Sbjct: 271 TNALNSKLTKIFINRKLRMEYG 292
>gi|256084273|ref|XP_002578355.1| arginine/serine-rich splicing factor [Schistosoma mansoni]
gi|360045236|emb|CCD82784.1| putative arginine/serine-rich splicing factor [Schistosoma
mansoni]
Length = 298
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTDRSK 66
+FV DP R + DI++ FE +G + V + RN FAF+ F+ E+A +A+ D S+
Sbjct: 13 VFVGGVDP-RVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 67 LVDRVISVEYALKD 80
+ VE+A+ +
Sbjct: 72 PFGSRLRVEHAVNN 85
>gi|2435503|gb|AAC39946.1| HRS [Mus musculus]
Length = 270
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|405117618|gb|AFR92393.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var. grubii
H99]
Length = 307
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 18 IRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDRSKLVD 69
IRTRERD++ F YG+V V I R F F+ T E+A + +E + L
Sbjct: 112 IRTRERDLEDEFMRYGDVEKVVIVYDQRTDRSRGFGFITMRTVEDAARCIEKLNGLSLHG 171
Query: 70 RVISVEYA 77
R I V+Y+
Sbjct: 172 RNIRVDYS 179
>gi|62087996|dbj|BAD92445.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila) variant [Homo sapiens]
Length = 278
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 100 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 158
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 159 DAKEAKERANGMELDGRRIRVDFSI 183
>gi|160333128|ref|NP_001026368.2| splicing factor, arginine/serine-rich 5 [Gallus gallus]
Length = 264
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|154291485|ref|XP_001546325.1| hypothetical protein BC1G_15263 [Botryotinia fuckeliana B05.10]
Length = 797
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + +RD+ F YG + + I++ F FVQF KALE ++
Sbjct: 346 LFIGNLPSEKLTKRDLFHVFHKYGELAQISIKQAFGFVQFHDAASCYKALEMEQGKEVRG 405
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDR- 128
R + +E + + R+ G++ +RR SP+ RG + A +R
Sbjct: 406 RKMHLEVSKAQKNTRN----------------AGQT----WRRSQSPEQTRGNTSARNRN 445
Query: 129 ---------YNGPVYDQ----RRSPDHGRHRSPVPVYDRRRSPDYGRN 163
YN +Q R P HG R P Y RSP RN
Sbjct: 446 PQTEARGSGYNHNDRNQNDRHRSQPQHGNQR-PHDGYRSGRSPSPSRN 492
>gi|332219026|ref|XP_003258659.1| PREDICTED: RNA-binding protein 47 isoform 1 [Nomascus leucogenys]
gi|441663629|ref|XP_004091690.1| PREDICTED: RNA-binding protein 47 [Nomascus leucogenys]
Length = 593
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|197099430|ref|NP_001127604.1| RNA-binding protein 47 [Pongo abelii]
gi|55732443|emb|CAH92922.1| hypothetical protein [Pongo abelii]
Length = 593
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|85094653|ref|XP_959930.1| hypothetical protein NCU02286 [Neurospora crassa OR74A]
gi|28921387|gb|EAA30694.1| predicted protein [Neurospora crassa OR74A]
Length = 933
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N R +R++ F +G + + ++ + FVQ+ T EE A+ +L
Sbjct: 476 IFIGNLSCERVSKREVFDVFSKFGRLAQISLKNAYGFVQYHTIEEGLAAIRGCRDVELGG 535
Query: 70 RVISVEYALKDDSER 84
R I++E + K D R
Sbjct: 536 RAINLEISKKQDRTR 550
>gi|146231848|gb|ABQ12999.1| hypothetical protein LOC54502 [Bos taurus]
Length = 492
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNL-MIETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
PT+ L+V N TR RD++ F YG V VR+ ++AFV+ + +A A D
Sbjct: 2 PTRKLYVGNVSRHATR-RDLEDLFSKYGRVRDVRLLSDYAFVEMGDERDAEDARYYLDGK 60
Query: 66 KLVDRVISVEYALKDDS--ERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
+L I VE+A + + + Y+ G + R P G + YR
Sbjct: 61 RLEGERIRVEFAKNERAPPRQPKCYNCGLLGHFARECPNGDWSNRCYR 108
>gi|432091266|gb|ELK24470.1| RNA-binding protein 28 [Myotis davidii]
Length = 762
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K +I + E D+K F YG VL V I R FAFVQF+ EA KAL+
Sbjct: 113 KARLIIRNLSFKCSEDDLKTIFAQYGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDS 90
S + ++ R ++V++A+ D + + S
Sbjct: 173 SMNMKEIKGRTVAVDWAVAKDKYKSTQSAS 202
>gi|2460180|gb|AAB71864.1| RNA binding protein [Rattus norvegicus]
Length = 124
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTMEH 71
>gi|449502419|ref|XP_004174507.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 2
[Taeniopygia guttata]
Length = 265
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|345197228|ref|NP_001230808.1| transformer-2 protein homolog beta isoform 2 [Homo sapiens]
gi|410037850|ref|XP_003950298.1| PREDICTED: transformer-2 protein homolog beta [Pan troglodytes]
gi|426343201|ref|XP_004038203.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Gorilla
gorilla gorilla]
gi|441633316|ref|XP_004089753.1| PREDICTED: transformer-2 protein homolog beta isoform 2 [Nomascus
leucogenys]
gi|4377849|gb|AAD19278.1| transformer-2-beta isoform 3 [Homo sapiens]
gi|119598610|gb|EAW78204.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598611|gb|EAW78205.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|119598614|gb|EAW78208.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog,
Drosophila), isoform CRA_a [Homo sapiens]
gi|194375203|dbj|BAG62714.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 12 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 70
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 71 DAKEAKERANGMELDGRRIRVDFSI 95
>gi|224051266|ref|XP_002200500.1| PREDICTED: serine/arginine-rich splicing factor 5 isoform 1
[Taeniopygia guttata]
Length = 264
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|197100753|ref|NP_001125414.1| transformer-2 protein homolog beta [Pongo abelii]
gi|55727979|emb|CAH90742.1| hypothetical protein [Pongo abelii]
Length = 288
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLSSYTT-ERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 4 MGDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 61
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + S+L+ + VE +
Sbjct: 62 ACDILNGSELLGSQLRVEIS 81
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 1 MGDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 58
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + S+L+ + VE +
Sbjct: 59 ACDILNGSELLGSQLRVEIS 78
>gi|344301518|gb|EGW31830.1| hypothetical protein SPAPADRAFT_62445 [Spathaspora passalidarum
NRRL Y-27907]
Length = 393
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 36/171 (21%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEA 55
P++ LFV ++FD T E +++ HF G+++ +R+ + FAF+ F+ +E
Sbjct: 225 PSRILFVGNLSFD---TTEDNLQEHFRHCGDIVRIRMATFEDTGKCKGFAFIDFKDEEGP 281
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDRY-----DSPRRGGY--GRHSPYGRSPSP 108
T AL+S L++R + +EY +D S+R+ D G +H P R
Sbjct: 282 TTALKSKLAKMLINRKLRLEYG-EDRSKRNPHMRARANDEVIEGEVPEEKHVPVER---- 336
Query: 109 AYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPD--HGRHRSPVPVYDRRRS 157
RRP R PA + V+ +RR PD + R +S V + +R+
Sbjct: 337 -VERRP-----RTEEPAPRKR---VFKERRQPDSNNKRQKSSVALATAQRA 378
>gi|118600907|gb|AAH34402.1| RBM47 protein [Homo sapiens]
gi|119613370|gb|EAW92964.1| RNA-binding protein, isoform CRA_a [Homo sapiens]
Length = 497
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNL-MIETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|348518317|ref|XP_003446678.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Oreochromis niloticus]
Length = 594
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSK 66
K LFV N T E +++ F +G + V+ +++AF+ FE ++ A KALE + +
Sbjct: 302 VKVLFVRNLANGVTEEL-LEKSFSEFGKLERVKKLKDYAFIHFEERDGAVKALEEMNGKE 360
Query: 67 LVDRVISVEYALKDDSERDDR 87
L I + +A D +R +R
Sbjct: 361 LEGEPIEIVFAKPPDQKRKER 381
>gi|347827609|emb|CCD43306.1| hypothetical protein [Botryotinia fuckeliana]
Length = 797
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 67/168 (39%), Gaps = 35/168 (20%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + +RD+ F YG + + I++ F FVQF KALE ++
Sbjct: 346 LFIGNLPSEKLTKRDLFHVFHKYGELAQISIKQAFGFVQFHDAASCYKALEMEQGKEVRG 405
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDR- 128
R + +E + + R+ G++ +RR SP+ RG + A +R
Sbjct: 406 RKMHLEVSKAQKNTRN----------------AGQT----WRRSQSPEQTRGNTSARNRN 445
Query: 129 ---------YNGPVYDQ----RRSPDHGRHRSPVPVYDRRRSPDYGRN 163
YN +Q R P HG R P Y RSP RN
Sbjct: 446 PQTEARGSGYNHNDRNQNDRHRSQPQHGNQR-PHDGYRSGRSPSPSRN 492
>gi|215734873|dbj|BAG95595.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
+LFV N P R D++ F+ +G V V + R FAFV+F +A+KA
Sbjct: 36 SLFVSNL-PRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARY 94
Query: 61 STDRSKLVDRVISVEYALK 79
+R L R ISV +A++
Sbjct: 95 HMNRKMLSGREISVAFAVQ 113
>gi|402595074|gb|EJW89000.1| splicing factor [Wuchereria bancrofti]
Length = 272
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P++ L V + T ERD+K F YG++ +V++ R F FV F+ E+A +
Sbjct: 97 PSRCLGVFGLS-LYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 155
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRPSP 116
A E +++ I ++Y++ R +P G Y G R P +YRR PSP
Sbjct: 156 AKERVAGTEIDGHKIRIDYSIT------KRPHTPTPGIYMGAVDSRRRGPPRSYRRSPSP 209
>gi|255642028|gb|ACU21281.1| unknown [Glycine max]
Length = 254
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEAQKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRMVDGREITVQFA 92
>gi|154416377|ref|XP_001581211.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121915436|gb|EAY20225.1| hypothetical protein TVAG_021720 [Trichomonas vaginalis G3]
Length = 202
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T T+ V N T E +K F +GNV+ RI + F F+++ TQEEA KA
Sbjct: 44 TITVHVGNL-SFETTEESLKIKFSEFGNVISSRIPVRAQSGKSKGFGFIEYATQEEADKA 102
Query: 59 LESTDRSKLVDRVISV 74
+ ++ + R I V
Sbjct: 103 IAEMNKKEFEGRTIVV 118
>gi|119613372|gb|EAW92966.1| RNA-binding protein, isoform CRA_c [Homo sapiens]
Length = 514
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFTSREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|336467515|gb|EGO55679.1| hypothetical protein NEUTE1DRAFT_86207 [Neurospora tetrasperma FGSC
2508]
gi|350287837|gb|EGZ69073.1| hypothetical protein NEUTE2DRAFT_93852 [Neurospora tetrasperma FGSC
2509]
Length = 933
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N R +R++ F +G + + ++ + FVQ+ T EE A+ +L
Sbjct: 476 IFIGNLSCERVSKREVFDVFSKFGRLAQISLKNAYGFVQYHTIEEGLAAIRGCRDVELGG 535
Query: 70 RVISVEYALKDDSER 84
R I++E + K D R
Sbjct: 536 RAINLEISKKQDRTR 550
>gi|209154606|gb|ACI33535.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 329
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RERD+++ F+ YG + V ++ F FV+F+ +A A+ + +L
Sbjct: 6 VFIGRLSP-HARERDVEKFFKGYGRIREVNLKNGFGFVEFDDPRDADDAVYELNGKELCS 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
N P+ L V + + T ERD++ F YG + + + R FAF+ FE +
Sbjct: 104 NPDPSTCLGVFGLN-LSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCD 162
Query: 55 ATKALESTDRSKLVDRVISVEYAL 78
A +A+E T+ + R I V+Y++
Sbjct: 163 AREAIEHTNGMNMDGRQIRVDYSI 186
>gi|45387723|ref|NP_991217.1| uncharacterized protein LOC402952 [Danio rerio]
gi|41351185|gb|AAH65633.1| Zgc:77262 [Danio rerio]
Length = 331
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N T E +++ FE YG V I +N+ FV + +E A KA+ + + ++
Sbjct: 4 IFVGNVASATT-EDELRALFEKYGAVSDCDILKNYGFVHMDEEEAAQKAVSALHKHEVNG 62
Query: 70 RVISVEYA 77
I+VEYA
Sbjct: 63 SRITVEYA 70
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 25 IKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISV 74
IK F+P+G V+ I +N+AFV + + EA A+ + SK+ + I V
Sbjct: 94 IKELFQPFGKVVECDIVKNYAFVHMQRENEALDAIAKLNHSKVDGQKIFV 143
>gi|345780008|ref|XP_532435.3| PREDICTED: RNA-binding protein 28 isoform 2 [Canis lupus
familiaris]
Length = 751
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 16/111 (14%)
Query: 8 KTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALE 60
K +I + E D+K F YG VL V I R FAFVQF+ EA KAL+
Sbjct: 113 KARLIIRNLSFKCSEDDLKTVFGQYGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALK 172
Query: 61 STDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
S + ++ R ++V++A+ D ++ + S +P + P P ++
Sbjct: 173 SMNMKEIKGRTVAVDWAVAKDKYKNTQSAS---------APGEKRPEPKHQ 214
>gi|346471403|gb|AEO35546.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEE 54
N ++ L V + T+ERD+K F YG + V++ R FAFV FET E+
Sbjct: 120 NPNTSRCLGVFGLS-LYTQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFETVED 178
Query: 55 ATKALESTDRSKLVDRVISVEYAL 78
A A + + ++ R I V+Y++
Sbjct: 179 AKAAKDRCNGLEIDGRKIRVDYSI 202
>gi|334324956|ref|XP_001377181.2| PREDICTED: transformer-2 protein homolog beta-like [Monodelphis
domestica]
Length = 299
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 123 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 181
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 182 DAKEAKERANGMELDGRRIRVDFSI 206
>gi|224049976|ref|XP_002187774.1| PREDICTED: RNA-binding protein 47 isoform 1 [Taeniopygia guttata]
Length = 594
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F T+E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKVFGQFNPGCVERVKKIRDYAFVHFTTREDAIHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
+L + V A D E+ RY
Sbjct: 304 VELEGSCLEVTLAKPVDKEQYTRY 327
>gi|361127777|gb|EHK99736.1| putative Uncharacterized RNA-binding protein C3H8.09c [Glarea
lozoyensis 74030]
Length = 812
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LF+ N + +RD+ F YG++ V I++ + FVQF T E +AL+ ++
Sbjct: 331 LFLGNLPSEKVTKRDLFHVFHKYGDLAQVSIKQAYGFVQFHTAESCRRALQKEQGVEVRG 390
Query: 70 RVISVEYA 77
R I +E +
Sbjct: 391 RKIHLEVS 398
>gi|114053173|ref|NP_001040506.1| bmp-2 protein [Bombyx mori]
gi|98990265|gb|ABF60228.1| bmp-2 [Bombyx mori]
Length = 297
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P +FV + P ++ D+++ FE +G V I FV +T+E+A A+ + S
Sbjct: 3 PQTKVFVGSL-PQGSKPEDLRKLFERFGVVTECDIMNRCGFVHMQTEEQAAAAIRALHNS 61
Query: 66 KLVDRVISVE 75
VISVE
Sbjct: 62 TFNGGVISVE 71
>gi|91093144|ref|XP_969873.1| PREDICTED: similar to AGAP007689-PA [Tribolium castaneum]
gi|270003014|gb|EEZ99461.1| hypothetical protein TcasGA2_TC000027 [Tribolium castaneum]
Length = 511
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 24 DIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDDSE 83
D++ F+ +G +L + ++ FAF+QFE + ++ A+++ + + L R I V AL +
Sbjct: 32 DLEEKFKVHGKILGLVLQMGFAFIQFENESQSHAAIQNENNTMLHGRKICVRQALDKTQK 91
Query: 84 RDDRYDSP---RRGGYGRH---SPYGRSPSPAYRRRPSP 116
+ + RR G +H PY P ++ P P
Sbjct: 92 GANNMNKQMPNRRQGPPQHYNEGPYMPPPPHQFQIHPLP 130
>gi|395833588|ref|XP_003789808.1| PREDICTED: RNA-binding protein 28 [Otolemur garnettii]
Length = 762
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F +G VL V I R FAFVQF+ EA KAL+S + ++ R
Sbjct: 124 KCSEIDLKTVFAQFGAVLEVNIPRKPDGKMRGFAFVQFKNLLEAGKALKSMNMKEIKGRT 183
Query: 72 ISVEYALKDDSERD 85
++V++A+ D +D
Sbjct: 184 VAVDWAVAKDKYKD 197
>gi|449707912|gb|EMD47478.1| zinc knuckle domain containing protein [Entamoeba histolytica KU27]
Length = 199
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYAL 78
RE D++ F Y + + I+ F FV ET+E+A K ++ + + + D+ I++E +
Sbjct: 2 RESDVREMFSKYTKIERIDIKTGFCFVVCETEEDAKKIIDLSQTTPFMFRDKKINIELSK 61
Query: 79 KDDSERDDRYDSPRRGGYGRHSP 101
+++S + + Y ++G R+ P
Sbjct: 62 QNNSNK-ECYICHQQGHIARNCP 83
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEA 55
P KTLFV + FD E D++ H+ +G V HVRI R+ + FV+F+ +++
Sbjct: 117 PFKTLFVARLAFD---VTENDLEEHYIKFGPVKHVRIVRDLKSGKSNGYGFVEFQEEDDF 173
Query: 56 TKALESTDRSKLVDRVISVE 75
KA + T+ S + R + V+
Sbjct: 174 RKAFQMTNGSIIKGRKVVVD 193
>gi|432921333|ref|XP_004080106.1| PREDICTED: RNA-binding protein 4.1-like [Oryzias latipes]
Length = 335
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
N + L V+N + + E +++ FE YG+V + +NFAFV +E AL++
Sbjct: 74 NPQGALKLHVVNVE--KGSESELRELFEEYGSVTECAVIKNFAFVHMANYDEGMDALQAL 131
Query: 63 DRSKLVDRVISV 74
D + I V
Sbjct: 132 DNKDFQGKRIQV 143
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N P T + +I+ F YG V RN+AFV + ++ ATKA+ ++
Sbjct: 4 IFIGNLSP-ETEKEEIEALFREYGAVTECAKYRNYAFVHMDDRKCATKAIRELHLRRVGG 62
Query: 70 RVISVE 75
R ++VE
Sbjct: 63 RAMNVE 68
>gi|401623907|gb|EJS41986.1| nop13p [Saccharomyces arboricola H-6]
Length = 401
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQ 52
M+ P++ LFV N T + +K+HF+ G+++ +R+ + FAF+ F+ +
Sbjct: 230 MSKNPPSRILFVGNLSFDVTDDL-LKKHFQHCGDIIKIRMATFEDSGKCKGFAFIDFKNE 288
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
E +T AL+ K+ R + +EY
Sbjct: 289 EGSTNALKDKSCRKIAGRPLRMEYG 313
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 9/78 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVL--------HVRIRRNFAFVQFETQEEATKALE 60
TL V N RT ++R FE YG V H + R FAFV+F + +A A
Sbjct: 15 TLKVDNLT-YRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRSDAQDAEA 73
Query: 61 STDRSKLVDRVISVEYAL 78
+ DR+ L R + V+ AL
Sbjct: 74 AMDRAMLDGRELRVQMAL 91
>gi|312077156|ref|XP_003141179.1| hypothetical protein LOAG_05594 [Loa loa]
Length = 214
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD-RSKLVDRVI 72
R ERDI+R F YG + + ++ +AFV+F + +A A+ + RS L DRVI
Sbjct: 13 RAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVI 67
>gi|115486805|ref|NP_001068546.1| Os11g0704700 [Oryza sativa Japonica Group]
gi|62733154|gb|AAX95271.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa Japonica Group]
gi|77552711|gb|ABA95508.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645768|dbj|BAF28909.1| Os11g0704700 [Oryza sativa Japonica Group]
Length = 502
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 9/79 (11%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
+LFV N P R D++ F+ +G V V + R FAFV+F +A+KA
Sbjct: 36 SLFVSNL-PRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARY 94
Query: 61 STDRSKLVDRVISVEYALK 79
+R L R ISV +A++
Sbjct: 95 HMNRKMLSGREISVAFAVQ 113
>gi|224138530|ref|XP_002322837.1| predicted protein [Populus trichocarpa]
gi|222867467|gb|EEF04598.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 3 NQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST 62
+ R T + RTR RD++ F YG V V ++R++AFV+F +A A
Sbjct: 5 DDRYASTRLYVGHLAARTRSRDLEHLFSKYGRVRDVDMKRDYAFVEFSDPRDADDARHYL 64
Query: 63 DRSKLVDRVISVEYA 77
D I VE+A
Sbjct: 65 DGKDFDGSRIIVEFA 79
>gi|183237523|ref|XP_651801.2| SON DNA-binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169799017|gb|EAL46414.2| SON DNA-binding protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 220
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYAL 78
RE D++ F Y + + I+ F FV ET+E+A K ++ + + + D+ I++E +
Sbjct: 2 RESDVREMFSKYTKIERIDIKTGFCFVVCETEEDAKKIIDLSQTTPFMFRDKKINIELSK 61
Query: 79 KDDSERDDRYDSPRRGGYGRHSP 101
+++S + + Y ++G R+ P
Sbjct: 62 QNNSNK-ECYICHQQGHIARNCP 83
>gi|407042235|gb|EKE41220.1| zinc knuckle domain containing protein [Entamoeba nuttalli P19]
Length = 190
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYAL 78
RE D++ F Y + + I+ F FV ET+E+A K ++ + + + D+ I++E +
Sbjct: 2 RESDVREMFSKYTKIERIDIKTGFCFVVCETEEDAKKIIDLSQTTPFMFRDKKINIELSK 61
Query: 79 KDDSERDDRYDSPRRGGYGRHSP 101
+++S + + Y ++G R+ P
Sbjct: 62 QNNSNK-ECYICHQQGHIARNCP 83
>gi|357490717|ref|XP_003615646.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|217073250|gb|ACJ84984.1| unknown [Medicago truncatula]
gi|355516981|gb|AES98604.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 267
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA+KA
Sbjct: 15 TYSLLVLNI-TFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
++ D + R I+V++A
Sbjct: 74 VDRLDGRMVDGREITVQFA 92
>gi|183233517|ref|XP_001913871.1| SON DNA binding protein [Entamoeba histolytica HM-1:IMSS]
gi|169801537|gb|EDS89354.1| SON DNA binding protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 190
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 21 RERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLV--DRVISVEYAL 78
RE D++ F Y + + I+ F FV ET+E+A K ++ + + + D+ I++E +
Sbjct: 2 RESDVREMFSKYTKIERIDIKTGFCFVVCETEEDAKKIIDLSQTTPFMFRDKKINIELSK 61
Query: 79 KDDSERDDRYDSPRRGGYGRHSP 101
+++S + + Y ++G R+ P
Sbjct: 62 QNNSNK-ECYICHQQGHIARNCP 83
>gi|345313298|ref|XP_001514404.2| PREDICTED: transformer-2 protein homolog beta-like [Ornithorhynchus
anatinus]
Length = 478
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 214 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 272
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 273 DAKEAKERANGMELDGRRIRVDFSI 297
>gi|427777527|gb|JAA54215.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Rhipicephalus pulchellus]
Length = 363
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RERD++R F+ +G + + I+ F FV+F+ +A A+ + +L+ +SVE A
Sbjct: 14 VRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKELLGDRVSVELA 71
>gi|47220462|emb|CAG03242.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1292
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RE+DI+R F YG ++ + ++ + FV+FE +A A+ + +L + VE+A
Sbjct: 13 VREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKELCGERVIVEHA 70
>gi|390352206|ref|XP_798746.2| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 2
[Strongylocentrotus purpuratus]
Length = 349
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYAL 78
+ RERD++R F +G + + ++ F FV+FE +A A+ + +LV + +E+A
Sbjct: 52 QARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHAR 111
Query: 79 KDDSERDD-RYDSPRRG 94
RD+ RY RRG
Sbjct: 112 GPARGRDEYRYGYRRRG 128
>gi|302785788|ref|XP_002974665.1| hypothetical protein SELMODRAFT_102224 [Selaginella moellendorffii]
gi|300157560|gb|EFJ24185.1| hypothetical protein SELMODRAFT_102224 [Selaginella moellendorffii]
Length = 232
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V R E+D++ +F G V+ R+ R F FV E+ ++A +
Sbjct: 49 PGNNLYVTGLS-TRVTEKDLEDYFSKEGKVVECRLVVDPRSHESRGFGFVALESLDDAER 107
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ S L R+I+VE A
Sbjct: 108 CIKRLHHSNLEGRIITVEKA 127
>gi|223648456|gb|ACN10986.1| Splicing factor, arginine/serine-rich 5 [Salmo salar]
Length = 315
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RERD+++ F+ YG + V ++ F FV+F+ +A A+ + +L
Sbjct: 6 VFIGRLSP-HARERDVEKFFKGYGRIREVNLKNGFGFVEFDDHRDADDAVYELNGKELCS 64
Query: 70 RVISVEYA 77
+++E+A
Sbjct: 65 ERVTIEHA 72
>gi|346468607|gb|AEO34148.1| hypothetical protein [Amblyomma maculatum]
Length = 338
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RERD++R F+ +G + + I+ F FV+F+ +A A+ + +L+ +SVE A
Sbjct: 14 VRERDLERFFKGFGRIREISIKNGFGFVEFDDHRDADDAVYELNGKELLGDRVSVELA 71
>gi|403341233|gb|EJY69916.1| RNA binding domain-containing protein 28 [Oxytricha trifallax]
Length = 732
Score = 42.4 bits (98), Expect = 0.076, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKALESTDR 64
I FD +E +K+ F+ +G ++ V + R F F++F T+EEA KA++ +
Sbjct: 37 IQFD---LKEPHLKKEFQKFGTIVAVNVPIKNENNLNRGFGFIEFSTKEEAQKAIDGMNG 93
Query: 65 SKLVDRVISVEYA 77
K RV++VEY+
Sbjct: 94 QKYKGRVLAVEYS 106
>gi|402581590|gb|EJW75538.1| splicing factor, partial [Wuchereria bancrofti]
Length = 212
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD-RSKLVDRVI 72
R ERDI+R F YG + + ++ +AFV+F + +A A+ + RS L DRVI
Sbjct: 13 RAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVI 67
>gi|50306903|ref|XP_453427.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642561|emb|CAH00523.1| KLLA0D08206p [Kluyveromyces lactis]
Length = 391
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 23/143 (16%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEA 55
P++ LFV ++FD T E +++HF+ G ++ +R+ + FAF+ F+ + A
Sbjct: 225 PSRILFVGNLSFD---TTEDLLRKHFQHCGEIMRIRMATFEDTGKCKGFAFIDFKDETGA 281
Query: 56 TKALESTDRSKLVDRVISVEYALKDDSERDDR----YDS--PRRGGYGRHS--PYGRSPS 107
T AL+ K+ R I +EY +D S+R R D+ PR+ + + P +
Sbjct: 282 TNALKDKSCRKIASRPIRMEYG-EDRSKRQVRRRPELDAREPRKPSFDIKTTQPSSSAAP 340
Query: 108 PAYRRRPSPDYGRGRSPAYDRYN 130
P R R +P Y R P++ N
Sbjct: 341 PPIRERRAPSYS-NRQPSHKDSN 362
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQEEATKA 58
P KTLF+ E+ +K+ FE YG + +V++ R +AF++FE + T A
Sbjct: 96 PKKTLFIGRL-SYEVNEKKLKKEFETYGKIKYVKVIYDQDKKPRGYAFIEFEHTKSVTDA 154
Query: 59 LESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR 98
D K+ +R I V+ + R + PRR G G+
Sbjct: 155 YNLADGKKIENRRILVDM----ERARTVKNWVPRRLGGGK 190
>gi|409079907|gb|EKM80268.1| hypothetical protein AGABI1DRAFT_113469 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 423
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TRE D+ F G + ++ ++ + FV+F+T+E A +++ + + I
Sbjct: 74 IGGLPEHTREADLHNCFGKIGGIANIELKVGYGFVEFDTREAAEESVAKYNEGHFMGNKI 133
Query: 73 SVEYA 77
VE +
Sbjct: 134 KVEIS 138
>gi|431911731|gb|ELK13879.1| RNA-binding protein 28 [Pteropus alecto]
Length = 758
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 23/109 (21%)
Query: 19 RTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATKALESTDRSKLVDRV 71
+ E D+K F YG VL V I R FAFVQF+ EA KAL+S + ++ R
Sbjct: 121 KCSEDDLKTVFAQYGAVLEVNIPKKPDGKMRGFAFVQFKNLLEAGKALKSMNMKEIKGRT 180
Query: 72 ISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGR 120
++V++A+ D ++ S +P +RP P + +
Sbjct: 181 VAVDWAVAKDKYKNTPSAS----------------APGVEKRPEPKHQK 213
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATK 57
M +QR T+ ++V N + ++ D++ F YG + V I N FAFV+FE +++A K
Sbjct: 4 MGDQRGTR-VYVGNLTD-KVKKDDLEGEFTKYGKLNSVWIAFNPPGFAFVEFEHRDDAEK 61
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + + S+L+ + VE +
Sbjct: 62 ACDILNGSELLGSQLRVEIS 81
>gi|242035597|ref|XP_002465193.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
gi|241919047|gb|EER92191.1| hypothetical protein SORBIDRAFT_01g033710 [Sorghum bicolor]
Length = 216
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 4 QRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEA 55
R T +L V+N RT D+ F+ YG V+ + I R FAFV++ ++EA
Sbjct: 12 NRDTFSLLVLNVS-FRTTADDLFPLFDRYGEVVDIHIPRDRRTGESRGFAFVRYNYEDEA 70
Query: 56 TKALESTDRSKLVDRVISVEYA 77
A++ D + R + V++A
Sbjct: 71 QDAIDGLDGMRFGGRALMVQFA 92
>gi|221117454|ref|XP_002167286.1| PREDICTED: uncharacterized protein LOC100197032 [Hydra
magnipapillata]
Length = 394
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 6 PTKTLF----VINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKAL-E 60
P+K++ I P RERDI + F +G+V + ++ N+ F+Q+E EA A+ E
Sbjct: 19 PSKSMMGARIYIGKLPGDIRERDIDKAFSKFGHVREIAMKGNYCFLQYEKTREAEDAVYE 78
Query: 61 STDRSKLVDRVISVEYA 77
DRS +R I VE+A
Sbjct: 79 MHDRSFFGER-IQVEHA 94
>gi|426198327|gb|EKV48253.1| hypothetical protein AGABI2DRAFT_191883 [Agaricus bisporus var.
bisporus H97]
Length = 426
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TRE D+ F G + ++ ++ + FV+F+T+E A +++ + + I
Sbjct: 77 IGGLPEHTREADLHNCFGKIGGIANIELKVGYGFVEFDTREAAEESVAKYNEGHFMGNKI 136
Query: 73 SVEYA 77
VE +
Sbjct: 137 KVEIS 141
>gi|66357806|ref|XP_626081.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|46227164|gb|EAK88114.1| SPAC25G10.01-like RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|323510225|dbj|BAJ78006.1| cgd5_1330 [Cryptosporidium parvum]
Length = 253
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 32/153 (20%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P+ TL+V ++T+E D++R FE YG V + N F FV +EEA +
Sbjct: 69 PSCTLYVCRLS-LKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMGNEEEAAR 127
Query: 58 ALESTDRSKLVDRVISVEYA------------LKDDSERDDRYDS-------PRRGGYGR 98
A ++ D + D + VE A K R +Y+S RG R
Sbjct: 128 AKDALDGKEYQDASLKVETARRAKPYDPTPGEYKGPQYRSIKYNSRTGYSRSSHRGNSFR 187
Query: 99 HSPYGR--SPSPAYRRRPSPDYGRGRSPAYDRY 129
HS R P P++ R Y R Y+RY
Sbjct: 188 HSTRSRYDYPPPSHSR--GDQYNRHNDDYYNRY 218
>gi|301759721|ref|XP_002915754.1| PREDICTED: hypothetical protein LOC100477296 [Ailuropoda
melanoleuca]
Length = 440
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 264 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 322
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 323 DAKEAKERANGMELDGRRIRVDFSI 347
>gi|217073798|gb|ACJ85259.1| unknown [Medicago truncatula]
Length = 280
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA+KA
Sbjct: 15 TYSLLVLNIT-FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
++ D + R I+V++A
Sbjct: 74 VDRLDGRMVDGREITVQFA 92
>gi|348519443|ref|XP_003447240.1| PREDICTED: hypothetical protein LOC100690923 isoform 1
[Oreochromis niloticus]
Length = 390
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 70
>gi|198435962|ref|XP_002131898.1| PREDICTED: similar to peptidylprolyl isomerase-like 4 [Ciona
intestinalis]
Length = 522
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNF--------AFVQFETQEEATK 57
P LFV + + T E D++ F +G ++ I R++ AFV+FET + K
Sbjct: 238 PDNVLFVCKLNAVTTDE-DLEIIFSRFGTIISCEIIRDYKTGDSLQYAFVEFETPDMCEK 296
Query: 58 ALESTDRSKLVDRVISVEYA 77
A + D + DR I V+++
Sbjct: 297 AYQKMDNVLIDDRRIHVDFS 316
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
N P+ L V + T ERD++ F YG + V I R FAFV FE E
Sbjct: 109 GNPDPSCCLGVFGLS-LYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSE 167
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A E + +L R I V++++
Sbjct: 168 DSKEAKEQANGMELDGRRIRVDFSI 192
>gi|148703339|gb|EDL35286.1| mCG1657 [Mus musculus]
Length = 288
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R FAFV FE +
Sbjct: 112 ANPDPNCCLGVFGLS-LYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVD 170
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 171 DAKEAKERANGMELDGRRIRVDFSI 195
>gi|341892188|gb|EGT48123.1| CBN-RSP-5 protein [Caenorhabditis brenneri]
gi|341901487|gb|EGT57422.1| hypothetical protein CAEBREN_20510 [Caenorhabditis brenneri]
Length = 204
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD 63
P RERDI+R + YG + ++ ++ FAFV FE +A A D
Sbjct: 10 PYNARERDIERFLKGYGRITNISMKYGFAFVDFEDSRDAEDACHDLD 56
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ EEA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|196007380|ref|XP_002113556.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190583960|gb|EDV24030.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 263
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 20 TRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
RERD+++ F YG + V ++ F FV+F+ +A A+ + +L I VE+A
Sbjct: 13 VRERDVEKFFRDYGKLKEVTLKGTFGFVEFDDSRDAEDAVYDLNNKELCGDRIIVEFA 70
>gi|393218783|gb|EJD04271.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 465
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 32/63 (50%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
I P TR D++ F G ++++ ++ + FV+FET+E A +++ + I
Sbjct: 82 IGGLPEHTRREDLQSCFGKIGEIVNIELKLGYGFVEFETREAAEESVAKYHEGFFMGNKI 141
Query: 73 SVE 75
VE
Sbjct: 142 RVE 144
>gi|3334756|emb|CAA76346.1| putative arginine/serine-rich splicing factor [Medicago sativa
subsp. x varia]
Length = 286
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA+KA
Sbjct: 15 TYSLLVLNIT-FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
++ D + R I+V++A
Sbjct: 74 VDRLDGRMVDGREITVQFA 92
>gi|226530532|ref|NP_001140562.1| uncharacterized protein LOC100272627 [Zea mays]
gi|194699996|gb|ACF84082.1| unknown [Zea mays]
gi|414590932|tpg|DAA41503.1| TPA: hypothetical protein ZEAMMB73_776046 [Zea mays]
Length = 251
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG ++ + I R FAFV+++ ++EA
Sbjct: 14 RDTYSLLVLNIT-FRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 72
Query: 57 KALESTDRSKLVD-RVISVEYA 77
KA++ D +LVD R I V++A
Sbjct: 73 KAVDRLD-GRLVDGREIMVQFA 93
>gi|442754133|gb|JAA69226.1| Putative alternative splicing factor srp55/b52/srp75 rrm
superfamily [Ixodes ricinus]
Length = 363
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 13 INFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVI 72
+N+D RERD++R F+ +G + + I+ F FV+F+ +A A+ + L+ +
Sbjct: 10 LNYD---VRERDLERFFKGFGRIREISIKNGFGFVEFDDPRDADDAVYELNGKDLMGDRV 66
Query: 73 SVEYA 77
SVE A
Sbjct: 67 SVELA 71
>gi|348532393|ref|XP_003453691.1| PREDICTED: nuclear receptor coactivator 5-like [Oreochromis
niloticus]
Length = 625
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+FV N ++D++ F PYG V+ V + R F FVQFE EEA A +
Sbjct: 30 IFVGNLPTSDMEKKDLEDLFSPYGKVVGVSMFRGFGFVQFERIEEAEAAKAAQKGRIYKG 89
Query: 70 RVISVEYALKDDSERDDRYDS-PRRGGYGRHSPYGRSPSPAYRRRPSPDYGR-GRSP 124
I V A++ + S PRR Y S YG S P R R SP YGR GR P
Sbjct: 90 YKIDVNMAVERRQAKPQSQQSPPRRAPY---STYGDSKEPRPRSR-SPVYGRDGREP 142
>gi|226469178|emb|CAX70068.1| Serine/arginine repetitive matrix protein 2 [Schistosoma
japonicum]
Length = 298
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTDRSK 66
+FV DP R + DI++ FE +G + V + RN FAF+ F+ E+A +A+ D S+
Sbjct: 13 VFVGGVDP-RVGKVDIEQEFERFGPIADVWVARNPPGFAFIVFKYAEDADRAVRRMDGSR 71
Query: 67 LVDRVISVEYALKD 80
+ VE+A+ +
Sbjct: 72 PFGSRLRVEHAVNN 85
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 16/106 (15%)
Query: 2 ANQRPTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR-------RNFAFVQFETQ 52
A P KTLFV IN++ T E ++R FE +G + + + R +AF++++ +
Sbjct: 90 ATTDPYKTLFVARINYE---TSESKLRREFEQFGKITKLILVHDPNGKPRGYAFIEYQHK 146
Query: 53 EEATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGR 98
E ++A + D K+ R + V+Y + R + PRR G G+
Sbjct: 147 ENMSEAYKKADGMKIDGRRVVVDY----ERGRTQKSWLPRRLGGGK 188
>gi|308481651|ref|XP_003103030.1| hypothetical protein CRE_25750 [Caenorhabditis remanei]
gi|308260406|gb|EFP04359.1| hypothetical protein CRE_25750 [Caenorhabditis remanei]
Length = 303
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 37 HVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY 96
H + R ++ +E+ E+A K+++ D ++ +VI VE + + + S +R
Sbjct: 172 HQHLHRGIGYIDYESVEDAEKSIKYMDGGQVDGQVIQVEMTIGGRA-----FVSGQR--- 223
Query: 97 GRHSPYGR--SPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGR 144
R SP+ R SP P R+ P G GRSP R P+ RRSP GR
Sbjct: 224 -RVSPFRRRASPPPRDRKSPIRRGGGGRSPPTFRRRSPMAGGRRSPMGGR 272
>gi|324509431|gb|ADY43968.1| Transformer-2 protein alpha [Ascaris suum]
Length = 301
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+K L V + T ERD++ F YG V +V++ R F FV FE E+A +
Sbjct: 108 PSKCLGVFGL-SLYTTERDLRELFSRYGEVENVQLVFDHPSGRSRGFGFVYFERMEDAME 166
Query: 58 ALESTDRSKLVDRVISVEYAL 78
A E +++ + V+Y++
Sbjct: 167 AKEKLAGAEVDGHRVRVDYSI 187
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|197692449|dbj|BAG70188.1| splicing factor arginine/serine-rich 5 [Homo sapiens]
Length = 107
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGIGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|9843653|emb|CAC03600.1| splicing factor SC35 [Arabidopsis thaliana]
Length = 303
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F YG V+ V I R FAFV+++ ++EA KA
Sbjct: 15 TYSLLVLNIT-FRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRVVDGREITVQFA 92
>gi|45120092|ref|NP_957161.1| serine/arginine-rich splicing factor 5a [Danio rerio]
gi|37681945|gb|AAQ97850.1| splicing factor, arginine/serine-rich 5 [Danio rerio]
Length = 259
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ P RERD+++ F+ YG + + ++ F FV+F+ +A A+ + +L
Sbjct: 6 VFIGRLSP-HARERDVEKFFKGYGRIREINLKNGFGFVEFDDYRDADDAVYELNGKELCS 64
Query: 70 RVISVEYALKDDSERDDRYD----SPRRGGY 96
+++E+A SPR GGY
Sbjct: 65 ERVTIEHARSRRGRGGGPGMGGRFSPRFGGY 95
>gi|15237641|ref|NP_201225.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|30697964|ref|NP_851261.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|9759396|dbj|BAB09851.1| unnamed protein product [Arabidopsis thaliana]
gi|17380868|gb|AAL36246.1| unknown protein [Arabidopsis thaliana]
gi|21689657|gb|AAM67450.1| unknown protein [Arabidopsis thaliana]
gi|22022546|gb|AAM83231.1| AT5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|23505861|gb|AAN28790.1| At5g64200/MSJ1_4 [Arabidopsis thaliana]
gi|332010470|gb|AED97853.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
gi|332010471|gb|AED97854.1| splicing factor, arginine/serine-rich 2 [Arabidopsis thaliana]
Length = 303
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F YG V+ V I R FAFV+++ ++EA KA
Sbjct: 15 TYSLLVLNIT-FRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRVVDGREITVQFA 92
>gi|170591200|ref|XP_001900358.1| transformer-2a3 [Brugia malayi]
gi|158591970|gb|EDP30572.1| transformer-2a3, putative [Brugia malayi]
Length = 453
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P++ L V + T ERD+K F YG++ +V++ R F FV F+ E+A +
Sbjct: 279 PSRCLGVFGLS-LYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 337
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRPSP 116
A E +++ I ++Y++ R +P G Y G R P +YRR PSP
Sbjct: 338 AKERVAGTEIDGHKIRIDYSIT------KRPHTPTPGIYMGAVDSRRRGPPRSYRRSPSP 391
>gi|449270976|gb|EMC81612.1| Transformer-2 like protein alpha, partial [Columba livia]
Length = 264
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V + R FAFV FE +
Sbjct: 103 ANPDPNTCLGVFGLS-LYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERID 161
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A+E + +L R I V+Y++
Sbjct: 162 DSKEAMEHANGMELDGRRIRVDYSI 186
>gi|348525823|ref|XP_003450421.1| PREDICTED: RNA-binding protein 4B-like [Oreochromis niloticus]
Length = 347
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALES 61
+Q P K L V N + + +++++ F YG V I +NFAFV +EA AL+
Sbjct: 73 TDQGPVK-LHVANVE--KGFDKELRDLFLEYGTVTECSIVKNFAFVHMSNSDEAMDALQG 129
Query: 62 TDRSKLVDRVISVEYA 77
D ++ + I V+ +
Sbjct: 130 LDNTEFQGKRIHVQIS 145
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ N T + +I+ F YG V +N+AFV E ++ ATKA+ KL
Sbjct: 4 IFIGNLSQ-NTEKDEIEALFTQYGTVTECAKYKNYAFVHMEDRKSATKAIRELHLHKLNG 62
Query: 70 RVISVE 75
R I+VE
Sbjct: 63 RPINVE 68
>gi|242767232|ref|XP_002341329.1| RNA-binding protein (Nab3), putative [Talaromyces stipitatus ATCC
10500]
gi|218724525|gb|EED23942.1| RNA-binding protein (Nab3), putative [Talaromyces stipitatus ATCC
10500]
Length = 859
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
LFV N R +RD+ F YG + + I++ + F+QF + +AL++ +
Sbjct: 368 LFVGNLPSERVTKRDLFHVFHKYGKLAQISIKQAYGFIQFLDADSCHRALQAEQGGVVRG 427
Query: 70 RVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRG 121
R I +E + S R G + P S R R PDY RG
Sbjct: 428 RKIHLEISKPQKSTRP-----------GANHPESARQSLTRRSRSPPDYTRG 468
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea
mays]
Length = 256
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|53130016|emb|CAG31434.1| hypothetical protein RCJMB04_6g11 [Gallus gallus]
Length = 123
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNP-AAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEY 76
+++E+
Sbjct: 65 ERVTIEH 71
>gi|448878322|gb|AGE46124.1| arginine/serine-rich splicing factor SC31 transcript II [Sorghum
bicolor]
Length = 180
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 13/85 (15%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQ 52
MAN + +FV N E D+++HF G V V I R FAFV F ++
Sbjct: 1 MANCK----VFVGNL-SYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSE 55
Query: 53 EEATKALESTDRSKLVDRVISVEYA 77
EA A+E+ + S + R +SV A
Sbjct: 56 GEANDAIENLNESDVAGRNVSVRQA 80
>gi|392568200|gb|EIW61374.1| cyclophilin-like protein [Trametes versicolor FP-101664 SS1]
Length = 444
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 1 MANQRP-TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFET 51
AN RP LFV +P+ TR+ D++ F +G ++ ++ R+ +AF++F+
Sbjct: 238 FANVRPPENVLFVCKLNPV-TRDEDLELIFSRFGTIISCQVIRDKKTGDSLQYAFIEFDK 296
Query: 52 QEEATKALESTDRSKLVDRVISVEYA 77
+EEA +A + DR I V+++
Sbjct: 297 REEAEQAYFKMQNVLVDDRRIWVDFS 322
>gi|297797433|ref|XP_002866601.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
gi|297312436|gb|EFH42860.1| hypothetical protein ARALYDRAFT_496619 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F YG V+ V I R FAFV+++ ++EA KA
Sbjct: 15 TYSLLVLNIT-FRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
+E D + R I+V++A
Sbjct: 74 VERLDGRVVDGREITVQFA 92
>gi|145533360|ref|XP_001452430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420118|emb|CAK85033.1| unnamed protein product [Paramecium tetraurelia]
Length = 189
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 10 LFVINFDPIRTR-ERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALEST-----D 63
LFV + + ++DIK F+ YG + V + +++FV F ++EA AL++T +
Sbjct: 9 LFVAGYSRSKVSGDKDIKEIFKKYGTIKDVAYKGSYSFVTFSNEQEAQDALKATNGQTYN 68
Query: 64 RSKLVDRVISVEYALKDDSERDDRYDSPRRGG-YGRHSPYG 103
KL V+ + K +D+ +GG + R+ P G
Sbjct: 69 GQKLKVDVVDNKKGRKTGPNDEDKCFKCSKGGHWARNCPNG 109
>gi|72012128|ref|XP_784623.1| PREDICTED: uncharacterized protein LOC579411 [Strongylocentrotus
purpuratus]
Length = 341
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN---FAFVQFETQEEATKALESTDRSK 66
LFV + R + D++R F+ YG + V + RN FAFV + +E+A KA+ S D
Sbjct: 14 LFVGDIG-TRVGKNDLEREFDRYGPITDVWVARNPPGFAFVVYMYREDADKAVRSLDGRL 72
Query: 67 LVDRVISVEYA 77
+ R + VE+A
Sbjct: 73 MCGRRVRVEHA 83
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ V I R FAFV+++ EEA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|85101977|ref|XP_961249.1| hypothetical protein NCU04258 [Neurospora crassa OR74A]
gi|28922791|gb|EAA32013.1| predicted protein [Neurospora crassa OR74A]
Length = 1752
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
+R G + +P G P+ + + SP Y RSPAY+ P Y++ RSPD+ +
Sbjct: 1370 QRSGSLQATPRGSPPTASGALQMSPGYENTRSPAYENPQSPAYEKTRSPDYQQQ------ 1423
Query: 152 YDRRRSPDY 160
Y+ RSPDY
Sbjct: 1424 YESTRSPDY 1432
>gi|388519919|gb|AFK48021.1| unknown [Medicago truncatula]
Length = 281
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 9/79 (11%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATKA 58
T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA+KA
Sbjct: 15 TYSLLVLNVT-FRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFAFVRYKYADEASKA 73
Query: 59 LESTDRSKLVDRVISVEYA 77
++ D + R I+V++A
Sbjct: 74 VDRLDGRMVDGREITVQFA 92
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|390352204|ref|XP_003727843.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform 1
[Strongylocentrotus purpuratus]
Length = 302
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
+ RERD++R F +G + + ++ F FV+FE +A A+ + +LV + +E+A
Sbjct: 14 QARERDVERFFRGFGRIREINLKNGFGFVEFEDYRDADDAVYELNGKELVGERVIIEHA 72
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 13/80 (16%)
Query: 6 PTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEA 55
P KTLFV +++D ER +KR FE YG + +R+ N +AF+++E + +
Sbjct: 119 PFKTLFVSRLSYD---VTERKLKREFEEYGPIKRIRLVHNKNSGKPRGYAFIEYEHKNDM 175
Query: 56 TKALESTDRSKLVDRVISVE 75
+A + D K+ DR + V+
Sbjct: 176 KQAYKMADGRKIEDRRVLVD 195
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 27/142 (19%)
Query: 9 TLFVINFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALE 60
+LFV N P R D++ F+ +G V V + R FAFV+F +A+KA
Sbjct: 398 SLFVSNL-PRSCRPEDVQVPFQKFGPVRDVYLPKDYNTGEPRGFAFVEFAHSSDASKARY 456
Query: 61 STDRSKLVDRVISVEYALKDDSERDD-------RYDSPRRGGYGRHSPYG---------- 103
+R L R ISV +A++ ++ R++SP+R R + G
Sbjct: 457 HMNRKMLSGREISVAFAVQTRKRPEEMRRIIGARHNSPQRKEECRTNSPGQPKGHDEKRK 516
Query: 104 -RSPSPAYRRRPSPDYGRGRSP 124
RS +P Y+ R D GR +P
Sbjct: 517 RRSYTPKYKDRQYADIGRDETP 538
>gi|426222784|ref|XP_004005562.1| PREDICTED: serine/arginine-rich splicing factor 10 [Ovis aries]
Length = 225
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 24 DIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75
D++R F YG ++ V + R FA+VQFE +A AL + DR + R I ++
Sbjct: 67 DLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQ 126
Query: 76 YALKD 80
+A D
Sbjct: 127 FAQGD 131
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea
mays]
Length = 254
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|336472140|gb|EGO60300.1| hypothetical protein NEUTE1DRAFT_36209 [Neurospora tetrasperma FGSC
2508]
gi|350294649|gb|EGZ75734.1| hypothetical protein NEUTE2DRAFT_57555 [Neurospora tetrasperma FGSC
2509]
Length = 1754
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
+R G + +P G P+ + + SP Y RSPAY+ P Y++ RSPD+ +
Sbjct: 1372 QRSGSLQATPRGSPPTASGALQMSPGYENTRSPAYENPQSPAYEKTRSPDYQQQ------ 1425
Query: 152 YDRRRSPDY 160
Y+ RSPDY
Sbjct: 1426 YESTRSPDY 1434
>gi|350587467|ref|XP_003482419.1| PREDICTED: RNA-binding protein 47-like [Sus scrofa]
Length = 522
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 7 TKTLFVINFDPIRTRERDIKRHFEPY--GNVLHVRIRRNFAFVQFETQEEATKALESTDR 64
K L+V N I T E IK+ F + G V V+ R++AFV F ++E+A A+ + +
Sbjct: 245 VKILYVRNLM-IETTEDTIKKSFGQFNPGCVERVKKIRDYAFVHFASREDAVHAMNNLNG 303
Query: 65 SKLVDRVISVEYALKDDSERDDRY 88
++L + V A D E+ RY
Sbjct: 304 TELEGSCLEVTLAKPVDKEQYSRY 327
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 17 PIRTRERDIKRHFEPYGNVLHVRIR----RNFAFVQFETQEEATKALESTDRSKLVDRVI 72
+ T ++++ HF YG + ++ R +AFV+++ + +A AL++ + + L++ I
Sbjct: 9 SVETTQKNLNDHFSKYGTITRNDVKKTNGRCYAFVEYKERRDADDALKALNGTTLLNSKI 68
Query: 73 SVEYA 77
SVE+A
Sbjct: 69 SVEWA 73
>gi|16944618|emb|CAD11387.1| hypothetical protein [Neurospora crassa]
Length = 1745
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 92 RRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRSPAYDRYNGPVYDQRRSPDHGRHRSPVPV 151
+R G + +P G P+ + + SP Y RSPAY+ P Y++ RSPD+ +
Sbjct: 1363 QRSGSLQATPRGSPPTASGALQMSPGYENTRSPAYENPQSPAYEKTRSPDYQQQ------ 1416
Query: 152 YDRRRSPDY 160
Y+ RSPDY
Sbjct: 1417 YESTRSPDY 1425
>gi|225560683|gb|EEH08964.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 873
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG++ + I++ + FVQF ALE+
Sbjct: 382 PGSRLFVGNLPTERVTKRDLFHLFHKYGDLAQISIKQAYGFVQFLEPTSCHNALEAEQGG 441
Query: 66 KLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
+ R I +E + S R+ DS R+ P RR SP+ RG S
Sbjct: 442 FIRGRKIHLEISKPQKSTRNAPAPDSSRQ--------------PVKRRSRSPEAARGVS 486
>gi|328773933|gb|EGF83970.1| hypothetical protein BATDEDRAFT_36405 [Batrachochytrium
dendrobatidis JAM81]
Length = 217
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 24 DIKRHFEPYGNVLHVRIR--------RNFAFVQFETQEEATKALESTDRSKLVDRVISVE 75
D+ HFE YG V + I R FA+V+F+ QE+A A+E ++ + ++VE
Sbjct: 19 DLMEHFEEYGKVNDIYIPKSYHNGRPRGFAYVKFDKQEDAELAMEKIPSIVILGQTLNVE 78
Query: 76 YA 77
+A
Sbjct: 79 WA 80
>gi|326508420|dbj|BAJ99477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508838|dbj|BAJ86812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533188|dbj|BAJ93566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V IRT+E D+++ F G V R+ R FAFV E E+A +
Sbjct: 106 PGNNLYVTGLS-IRTQETDLEKFFSKEGKVKDCRVVTDPRTKESRGFAFVTMENVEDARR 164
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ + L R+ISV A
Sbjct: 165 CIKYLHHTVLEGRLISVAKA 184
>gi|194696838|gb|ACF82503.1| unknown [Zea mays]
gi|219888871|gb|ACL54810.1| unknown [Zea mays]
gi|413922157|gb|AFW62089.1| arginine/serine-rich splicing factor 10 isoform 1 [Zea mays]
gi|413922158|gb|AFW62090.1| arginine/serine-rich splicing factor 10 isoform 2 [Zea mays]
gi|413922159|gb|AFW62091.1| arginine/serine-rich splicing factor 10 isoform 3 [Zea mays]
Length = 295
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 16/112 (14%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNV--LHVRI------RRNFAFVQFETQEEATK 57
P L+V R E D+++ F G V HV + R FAFV +T E A +
Sbjct: 84 PGNNLYVTGLS-TRVTEDDLEKFFSKEGKVKNCHVVLDPRTKESRGFAFVTMDTLEGARR 142
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSP 108
+++ R+ L R+++VE A + R +P G Y GR RSPSP
Sbjct: 143 SIKYLHRTVLEGRLVTVEKA------KRTRERTPTPGKYCGRRGGSQRSPSP 188
>gi|149025039|gb|EDL81406.1| splicing factor, arginine/serine-rich 5, isoform CRA_e [Rattus
norvegicus]
Length = 108
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 10 LFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVD 69
+F+ +P RE+D++R F+ YG + + ++R F FV+FE +A A+ D +L
Sbjct: 6 VFIGRLNPA-AREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCS 64
Query: 70 RVISVEYA 77
+ + ++
Sbjct: 65 ESVLMHFS 72
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea
mays]
Length = 270
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 1 MANQRPTKTLFV--INFDPIRTRERDIKRHFEPYGNVLHVRIR--------RNFAFVQFE 50
+A P KTLFV +++D E+ +KR FE YG V VR+ R +AFV+FE
Sbjct: 146 LAEGDPFKTLFVARVSYD---ATEKKLKREFEEYGPVKRVRLVTQKDSGKPRGYAFVEFE 202
Query: 51 TQEEATKALESTDRSKLVDR--VISVE 75
+ + A + D K+ R V+ VE
Sbjct: 203 HKNDMKTAYKMADGRKIEGRRVVVDVE 229
>gi|393909855|gb|EFO22008.2| transformer-2b6 [Loa loa]
Length = 469
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P++ L V + T ERD+K F YG++ +V++ R F FV F+ E+A +
Sbjct: 294 PSRCLGVFGL-SLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 352
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRPSP 116
A E +++ I ++Y++ R +P G Y G R P +YRR PSP
Sbjct: 353 AKERVAGTEIDGHKIRIDYSIT------KRPHTPTPGIYMGAVDSRRRGPPRSYRRSPSP 406
>gi|348519445|ref|XP_003447241.1| PREDICTED: hypothetical protein LOC100690923 isoform 2
[Oreochromis niloticus]
Length = 386
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVEYA 77
R RE+D++R F+ YG +L V ++ + FV+F+ +A A+ + +L + VE+
Sbjct: 12 RAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKELCGERVIVEHT 70
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea
mays]
Length = 264
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|154278337|ref|XP_001539982.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413567|gb|EDN08950.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 723
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG++ + I++ + FVQF ALE+
Sbjct: 229 PGSRLFVGNLPTERVTKRDLFHLFHKYGDLAQISIKQAYGFVQFLEPTSCHNALEAEQGG 288
Query: 66 KLVDRVISVEYALKDDSERD 85
+ R I +E + S R+
Sbjct: 289 FIRGRKIHLEISKPQKSTRN 308
>gi|325088970|gb|EGC42280.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 871
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 15/119 (12%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRS 65
P LFV N R +RD+ F YG++ + I++ + FVQF ALE+
Sbjct: 377 PGSRLFVGNLPTERVTKRDLFHLFHKYGDLAQISIKQAYGFVQFLEPTSCHNALEAEQGG 436
Query: 66 KLVDRVISVEYALKDDSERDDRY-DSPRRGGYGRHSPYGRSPSPAYRRRPSPDYGRGRS 123
+ R I +E + S R+ DS R+ P RR SP+ RG S
Sbjct: 437 FIRGRKIHLEISKPQKSTRNAPAPDSSRQ--------------PVKRRSRSPEAARGVS 481
>gi|67593714|ref|XP_665745.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656562|gb|EAL35515.1| hypothetical protein Chro.50251 [Cryptosporidium hominis]
Length = 254
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 33/154 (21%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRN--------FAFVQFETQEEATK 57
P+ TL+V ++T+E D++R FE YG V + N F FV +EEA +
Sbjct: 69 PSCTLYVCRLS-LKTKEDDLRRLFEDYGEVTDCHLVTNPLSGESRCFGFVTMGNEEEAAR 127
Query: 58 ALESTDRSKLVDRVISVEYA------------LKDDSERDDRYDS--------PRRGGYG 97
A ++ D + D + VE A K R +Y+S RG
Sbjct: 128 AKDALDGKEYQDASLKVETARRAKPYDPTPGEYKGPQYRSIKYNSRTGYYSRSSHRGNSF 187
Query: 98 RHSPYGR--SPSPAYRRRPSPDYGRGRSPAYDRY 129
RHS R P P++ R Y R Y+RY
Sbjct: 188 RHSTRSRYDYPPPSHSR--GDQYNRHNDDYYNRY 219
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRDVDGRNIMVQFA 92
>gi|324522802|gb|ADY48134.1| Transformer-2 protein alpha, partial [Ascaris suum]
Length = 306
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P+K L V + T ERD++ F YG V +V++ R F FV FE E+A +
Sbjct: 108 PSKCLGVFGL-SLYTTERDLRELFSRYGEVENVQLVFDHPSGRSRGFGFVYFERMEDAME 166
Query: 58 ALESTDRSKLVDRVISVEYAL 78
A E +++ + V+Y++
Sbjct: 167 AKEKLAGAEVDGHRVRVDYSI 187
>gi|68036464|gb|AAY84876.1| alternative splicing regulator [Triticum aestivum]
Length = 250
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P L+V RT+E D+++ F G V R+ R+FAFV E E+A +
Sbjct: 113 PGNNLYVTGLS-TRTQETDLEKFFSKEGKVKDCRVVIDPRTKESRDFAFVTMENVEDARR 171
Query: 58 ALESTDRSKLVDRVISVEYA 77
++ R+ L R+ISV A
Sbjct: 172 CIKYLHRTVLEGRLISVAKA 191
>gi|393911086|gb|EJD76160.1| hypothetical protein LOAG_16828 [Loa loa]
Length = 407
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTD-RSKLVDRVI 72
R ERDI+R F YG + + ++ +AFV+F + +A A+ + RS L DRVI
Sbjct: 13 RAHERDIERFFRGYGRITEILLKNGYAFVEFSDRRDAEDAVHDLNGRSLLGDRVI 67
>gi|213408843|ref|XP_002175192.1| pre-mRNA-splicing factor srp1 [Schizosaccharomyces japonicus
yFS275]
gi|212003239|gb|EEB08899.1| pre-mRNA-splicing factor srp1 [Schizosaccharomyces japonicus
yFS275]
Length = 279
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI-------RRNFAFVQFETQEEATK 57
R +TL+V F P R RD+ FEPYG ++ I R FAFV++E +A
Sbjct: 4 RSNRTLYVTGFRPG-MRARDLAYEFEPYGPLIRCDIPIPRNPEARPFAFVEYEDPRDAED 62
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGYGRHSPYGRSP----SPAYRRR 113
A ++ V+ VE+A + S R + GR RSP SP YRR
Sbjct: 63 AYHEVHGRRIDRDVLRVEWARQSFSSRREERRGRFGQERGRPRYRSRSPGRRLSP-YRRS 121
Query: 114 PSPDYG 119
P P YG
Sbjct: 122 PGPKYG 127
>gi|449492584|ref|XP_002192791.2| PREDICTED: transformer-2 protein homolog alpha [Taeniopygia
guttata]
Length = 275
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V + R FAFV FE +
Sbjct: 113 ANPDPNTCLGVFGLS-LYTTERDLREVFSRYGPLTGVNVVYDQRTGRSRGFAFVYFERID 171
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
++ +A+E + +L R I V+Y++
Sbjct: 172 DSKEAMEHANGMELDGRRIRVDYSI 196
>gi|55742374|ref|NP_001006878.1| splicing factor, arginine/serine-rich 10 [Xenopus (Silurana)
tropicalis]
gi|49903569|gb|AAH77018.1| splicing factor, arginine/serine-rich 10 (transformer 2 homolog)
[Xenopus (Silurana) tropicalis]
Length = 293
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 2 ANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQE 53
AN P L V + T ERD++ F YG + V I R F+FV FE +
Sbjct: 116 ANPDPNCCLGVFGL-SLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVD 174
Query: 54 EATKALESTDRSKLVDRVISVEYAL 78
+A +A E + +L R I V++++
Sbjct: 175 DAKEAKERANGMELDGRRIRVDFSI 199
>gi|448878314|gb|AGE46120.1| arginine/serine-rich splicing factor SC30 transcript I [Sorghum
bicolor]
Length = 250
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG ++ + I R FAFV+++ ++EA
Sbjct: 13 RDTYSLLVLNI-TFRTTADDLFPLFDKYGEIVDIYIPRDRRTGDSRGFAFVRYKYEDEAQ 71
Query: 57 KALESTDRSKLVD-RVISVEYA 77
KA++ D +LVD R I V++A
Sbjct: 72 KAVDRLD-GRLVDGREIMVQFA 92
>gi|312079180|ref|XP_003142063.1| transformer-2b6 [Loa loa]
Length = 424
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P++ L V + T ERD+K F YG++ +V++ R F FV F+ E+A +
Sbjct: 249 PSRCLGVFGL-SLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 307
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRPSP 116
A E +++ I ++Y++ R +P G Y G R P +YRR PSP
Sbjct: 308 AKERVAGTEIDGHKIRIDYSIT------KRPHTPTPGIYMGAVDSRRRGPPRSYRRSPSP 361
>gi|448878328|gb|AGE46127.1| arginine/serine-rich splicing factor SC31 transcript V [Sorghum
bicolor]
Length = 185
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ FE YG V+ V I R FAFV+++ +EA
Sbjct: 13 RDTFSLLVLNIS-FRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA++ D + R I V++A
Sbjct: 72 KAIDRLDGRNVDGRNIMVQFA 92
>gi|393909854|gb|EJD75619.1| transformer-2b6, variant [Loa loa]
Length = 442
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 16/120 (13%)
Query: 6 PTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEATK 57
P++ L V + T ERD+K F YG++ +V++ R F FV F+ E+A +
Sbjct: 267 PSRCLGVFGL-SLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIE 325
Query: 58 ALESTDRSKLVDRVISVEYALKDDSERDDRYDSPRRGGY-GRHSPYGRSPSPAYRRRPSP 116
A E +++ I ++Y++ R +P G Y G R P +YRR PSP
Sbjct: 326 AKERVAGTEIDGHKIRIDYSIT------KRPHTPTPGIYMGAVDSRRRGPPRSYRRSPSP 379
>gi|189238942|ref|XP_971700.2| PREDICTED: similar to GA20673-PA [Tribolium castaneum]
Length = 364
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 31/75 (41%)
Query: 1 MANQRPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALE 60
M+ + T T + P D++ F PYG + I F+ E + A KA+
Sbjct: 1 MSRRSETTTKVFVGSLPNGVTTDDLRSLFAPYGAIAECDIANRCGFLHLEDHDLAMKAIA 60
Query: 61 STDRSKLVDRVISVE 75
+ + + ISVE
Sbjct: 61 ELNGTNFMGGRISVE 75
>gi|168064593|ref|XP_001784245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664211|gb|EDQ50939.1| predicted protein [Physcomitrella patens subsp. patens]
gi|448878415|gb|AGE46170.1| arginine/serine-rich splicing factor SC37 transcript I
[Physcomitrella patens subsp. patens]
gi|448878417|gb|AGE46171.1| arginine/serine-rich splicing factor SC37 transcript II
[Physcomitrella patens subsp. patens]
Length = 319
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 5 RPTKTLFVINFDPIRTRERDIKRHFEPYGNVLHVRI--------RRNFAFVQFETQEEAT 56
R T +L V+N RT D+ F+ YG V+ + I R FAFV+++ +EA
Sbjct: 13 RDTYSLLVLNIT-FRTSADDLYPLFDRYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQ 71
Query: 57 KALESTDRSKLVDRVISVEYA 77
KA+E D ++ R I V++A
Sbjct: 72 KAIERLDGREVDGRHIVVQFA 92
>gi|68037220|gb|AAY84882.1| mRNA transport factor [Triticum aestivum]
Length = 209
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 20 TRERDIKRHFEPYGNV--LHVRIRR------NFAFVQFETQEEATKALESTDRSKLVDRV 71
+E D+ F YG V LH+ + R +A +++E E+A +A+ +D ++L+ ++
Sbjct: 114 AQEEDLHNIFGDYGQVKNLHLNLDRRTGFVKGYALIEYENFEQAKRAIRESDGTELLSQI 173
Query: 72 ISVEYALKD 80
ISV++A +
Sbjct: 174 ISVDWAFSN 182
>gi|145539490|ref|XP_001455435.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423243|emb|CAK88038.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 19 RTRERDIKRHFEPYGNVLHVRIRRNFAFVQFETQEEATKALESTDRSKLVDRVISVE--- 75
+T D+++ F+ YG + + +R AF++FE +++A KA+ D ++ I+V+
Sbjct: 13 KTSREDLQKEFQRYGKIKDIDLRSTHAFIEFEGRDDAKKAISQMDGKRIGGDRITVKSRD 72
Query: 76 ---YALKDDSERDDRYDSPRRGGYGRHSPYGRSPSPAYR 111
+ RD ++ R+G + G YR
Sbjct: 73 NRHLGANGPTARDVCFNCGRKGHWANDCKEGDLRDTCYR 111
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.139 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,122,320,746
Number of Sequences: 23463169
Number of extensions: 147449362
Number of successful extensions: 419619
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1850
Number of HSP's successfully gapped in prelim test: 9424
Number of HSP's that attempted gapping in prelim test: 391675
Number of HSP's gapped (non-prelim): 26575
length of query: 173
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 41
effective length of database: 9,262,057,059
effective search space: 379744339419
effective search space used: 379744339419
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)