BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030664
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ESY9|GILT_MOUSE Gamma-interferon-inducible lysosomal thiol reductase OS=Mus
musculus GN=Ifi30 PE=1 SV=3
Length = 248
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 9/131 (6%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V++ LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VRVSLYYESLCGACRYFLVRDLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFD--KLELDPKPIV 157
G EC LN VEAC +D E F I C+E + + + C E+ P+ I+
Sbjct: 117 GELECRLNMVEACLLDKL-EKEAAFLTIVCMEEM--DDMEKKLGPCLQVYAPEVSPESIM 173
Query: 158 DCYTSGYGTQV 168
+C T GTQ+
Sbjct: 174 ECATGKRGTQL 184
>sp|Q499T2|GILT_RAT Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus
norvegicus GN=Ifi30 PE=2 SV=1
Length = 248
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 9/131 (6%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V + LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VNVSLYYESLCGACRYFLVRNLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKL--ELDPKPIV 157
G EC LN VEAC +D E F I C+E + E + C E+ P+ I+
Sbjct: 117 GELECKLNKVEACLLDKL-EKEAAFLTIVCMEEM--EDMEKKLGPCLQLYVPEVSPESIM 173
Query: 158 DCYTSGYGTQV 168
+C T GT++
Sbjct: 174 ECATGKRGTEL 184
>sp|A6QPN6|GILT_BOVIN Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus
GN=IFI30 PE=2 SV=1
Length = 244
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 31/142 (21%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LCP F+I L + + +L I+++ L P+GNA+ R + F CQH
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTW--LMVLEILNVTLVPYGNAQERNVSGKWEFTCQH 113
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKLELDPKP---- 155
G ECLLN VEAC +D E F I C+E + D +E + KP
Sbjct: 114 GERECLLNKVEACLLDQL-EQKIAFLTIVCLEEM-------------DDMEQNLKPCLQI 159
Query: 156 ---------IVDCYTSGYGTQV 168
I++C T G Q+
Sbjct: 160 YAPKVSADSIMECATGNRGMQL 181
>sp|P34276|YKJ2_CAEEL GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=3
SV=1
Length = 323
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 23 FLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSP 82
F+ A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P
Sbjct: 120 FIEYEPKAGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIP 179
Query: 83 WGNAKIRANNSTFD--CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIES 132
+G A+ + F+ CQHGP+EC +N + C ID + +++ P + C++
Sbjct: 180 FGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG 231
>sp|B3SP85|GILT_PIG Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa
GN=IFI30 PE=2 SV=1
Length = 246
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 24 LSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPW 83
L V S P +VN LYYESLC F++ L + + + I+++ L P+
Sbjct: 46 LQRPVGKSDPPPVNVN------LYYESLCNGCRYFLVRELFPTW--LMVWEILNVTLVPY 97
Query: 84 GNAKIR--ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQ 141
GNA+ R + F CQHG EC +N VEAC +D E N F I CIE L +
Sbjct: 98 GNAQERNVSGRWEFTCQHGEQECKMNKVEACLLDKL-EKNMAFLTIVCIEEL--DDMEKN 154
Query: 142 WETCFD--KLELDPKPIVDCYTSGYGTQV 168
E C ++ P I++C G Q+
Sbjct: 155 LEPCLQIYAPKVSPDSIMECAMGDRGMQL 183
>sp|O17861|YVRI_CAEEL GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1
SV=1
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 39 NSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFDCQ 98
N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQ
Sbjct: 73 NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKV-LEDGTIKCQ 130
Query: 99 HGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSQW-ETCFDKLEL 151
HG EC +N E C IDS + P + CI ESL + +++ + CF+KL++
Sbjct: 131 HGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQI 184
>sp|P13284|GILT_HUMAN Gamma-interferon-inducible lysosomal thiol reductase OS=Homo
sapiens GN=IFI30 PE=1 SV=3
Length = 250
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + + F CQH
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQH 119
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPF--IYCIESLVYEHKYSQWETCFD--KLELDPKP 155
G EC N VEAC +D EL+ F I C+E +E C L P
Sbjct: 120 GEEECKFNKVEACVLD---ELDMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDT 174
Query: 156 IVDCYTSGYGTQV 168
I++C G Q+
Sbjct: 175 IMECAMGDRGMQL 187
>sp|Q23570|YO30_CAEEL GILT-like protein ZK669.3 OS=Caenorhabditis elegans GN=ZK669.3 PE=1
SV=1
Length = 218
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 90 ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDK- 148
A++ DC HG ECLLN ++AC I++ P + + CI+ ++ E CF+
Sbjct: 84 ADDVVCDCHHGNRECLLNQLQACVIEALPNFEDYMEVVTCIQG--KQNISMAAEVCFEGP 141
Query: 149 LELDPKPIVDCYTSGYGTQV 168
+LD +++C S +G ++
Sbjct: 142 TKLDRTKMMECAESRHGRKL 161
>sp|Q61Z40|YO30_CAEBR GILT-like protein CBG03282 OS=Caenorhabditis briggsae GN=CBG03282
PE=3 SV=1
Length = 220
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 14 LVFYITLFCFLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLL 73
V+Y LF + + +S+ + + KV + + E C ++ ++ + + ++ +
Sbjct: 8 FVYYSFLFILV---LCSSKDTEVNNGEKVNIVAFGEGRCSDTSFWMKWHWLPMWRMLGST 64
Query: 74 SIVDLHLSPWGNAKIRANNSTFD-----CQHGPSECLLNTVEACAIDSWPELNKHFPFIY 128
++ P+G ++ + D C HG ECLLN ++AC I++ P ++ +
Sbjct: 65 GRINFEYHPYGIKTTCVDSDSGDDVVCECHHGARECLLNQLQACVIEALPNFEEYMEVVT 124
Query: 129 CIESLVYEHKYSQWETCFDK-LELDPKPIVDCYTSGYGTQV 168
CI+ ++ E CF++ +L+ ++ C S +G ++
Sbjct: 125 CIQG--KQNISMAAEACFNEPSKLERAKMMSCADSRHGRKL 163
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 53 PYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKI---------RANNSTFDCQHG--- 100
P ++NF +N + D VD PWGN I R + + C H
Sbjct: 47 PTASNFELNP-----KSTDNCGTVDFQGIPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWS 101
Query: 101 PSECLLNTVEACAIDSWPELNKHFPFIYCIES 132
P E L+TV+ A DS+ E + C+ +
Sbjct: 102 PEELSLDTVQVAAEDSFYEFQRFLKNPNCLRN 133
>sp|Q8NJP6|AXE1_PENPU Acetylxylan esterase A OS=Penicillium purpurogenum GN=axeA PE=1
SV=1
Length = 382
Score = 31.2 bits (69), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 10 KALSLVFYITLFCFLSGSVSASRTSPSDVNSKVKLG 45
K+LS F +TLF +L+ +S++RT DVN +V G
Sbjct: 2 KSLSFSFLVTLFLYLT--LSSARTLGKDVNKRVTAG 35
>sp|Q87ZE0|RGMG_PSESM Putative ribose/galactose/methyl galactoside import ATP-binding
protein OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=PSPTO_3489 PE=3 SV=1
Length = 525
Score = 30.8 bits (68), Expect = 4.8, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 24 LSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSP 82
+SGS +AS + D+ S GL ++ CPY I+++ K F V L V L L P
Sbjct: 1 MSGSATASPPAKPDLPSSDGAGLTPDAQCPYLLE--ISHISKGFPGVIALDDVQLRLRP 57
>sp|Q8L7Q7|PME64_ARATH Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis
thaliana GN=PME64 PE=2 SV=2
Length = 602
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 97 CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYE 136
C++G +C TV+ A+DS P+ N+ F+ I VYE
Sbjct: 292 CKNGGKDCKYKTVQE-AVDSAPDTNRTVKFVIRIREGVYE 330
>sp|O55751|146R_IIV6 Putative MSV199 domain-containing protein 146R OS=Invertebrate
iridescent virus 6 GN=IIV6-146R PE=4 SV=1
Length = 245
Score = 30.0 bits (66), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 61 NYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFDCQHGPSECLLNTVEACAIDSWPE- 119
N+++K+ ++V+++SI+DLHL F +G L ++ I+ P
Sbjct: 56 NFVIKLLKEVEIISILDLHLLE----------QNFIKDYGTLNTLHGKLKNLEINDKPTN 105
Query: 120 --LNKHFPFIYCIE 131
L+K PF IE
Sbjct: 106 VVLSKQTPFFTTIE 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,926,175
Number of Sequences: 539616
Number of extensions: 2441661
Number of successful extensions: 4340
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4318
Number of HSP's gapped (non-prelim): 16
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)