BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030665
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NYP0|TM208_DANRE Transmembrane protein 208 OS=Danio rerio GN=tmem208 PE=2 SV=1
Length = 175
Score = 100 bits (248), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 85/147 (57%), Gaps = 3/147 (2%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN ++ R+I+ N IY V +++F+++ ++ W L+ Y Y+ +SAMAK
Sbjct: 17 EENQDTLKFYSRIILGANAIYIAVNLLLFYNSSSFWTWFSLMFAVAVYVGSYRSMSAMAK 76
Query: 71 PTYTDDGELIDGGFDMST-GGICGYLHDVIYITSFVQVMSILSEKFWYTYLVIPAFGAYQ 129
P + +DG L+DGG D++ G+ +L DVI +T+ VQV+S LS FWY +L+ PA +
Sbjct: 77 PAFAEDGSLLDGGIDLNMEQGMAEHLKDVILLTAIVQVLSTLSSYFWYLWLLAPARALHL 136
Query: 130 SF-GFIKGFLPQGSE-GDTEDEKTRKK 154
+ F+ + S+ E+EK KK
Sbjct: 137 LWVNFLGPWFSADSQAAPEENEKNDKK 163
>sp|Q54UB0|TM208_DICDI Transmembrane protein 208 homolog OS=Dictyostelium discoideum
GN=tmem208 PE=3 SV=1
Length = 173
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHS-TFTWKHWVGLVLTSVAYA 59
MAN GAKKRK +N + + K+R LI+A I +++ +++HS TF W + +
Sbjct: 1 MANSGAKKRKTQNEKELFKVR-LIMAAGTIPYILYRVVYHSETFGGWLWFAYLSLNALNM 59
Query: 60 IPYQQLSAMAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +++M K TY ++GELIDGG D++ GG+ Y D+IY+ +Q + ++S+K Y
Sbjct: 60 FAYYIITSMCKLTYDNNGELIDGGSDLNQGGMTEYYFDIIYVCCIIQGLGLISDKCLYLI 119
Query: 120 LVIPAFGAYQSF-GFIKGFLPQGSEGDTEDEKTRKKR 155
LVIPAF ++ + FI +L ++ + ++ + KR
Sbjct: 120 LVIPAFAIFKIWKTFIGPYLASRNQQQQQPQEEKSKR 156
>sp|Q3SZZ5|TM208_BOVIN Transmembrane protein 208 OS=Bos taurus GN=TMEM208 PE=2 SV=1
Length = 173
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
+ +G K+ EEN ++ R+I+ N IY +V +++F+S+ ++ W+ L+ + Y
Sbjct: 7 VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVVFYSSASFWAWMALLFSLAVYGA 66
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMST-GGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +S+MA+ +++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +
Sbjct: 67 SYHSMSSMARAAFSEDGALVDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126
Query: 120 LVIPAFGAY 128
L+ P Y
Sbjct: 127 LLAPGRALY 135
>sp|Q9CR96|TM208_MOUSE Transmembrane protein 208 OS=Mus musculus GN=Tmem208 PE=2 SV=1
Length = 173
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 75/129 (58%), Gaps = 1/129 (0%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
+ +G K+ EEN ++ R+I+ N IY +V ++ F+S+ ++ W+ L + Y
Sbjct: 7 VGTRGKKQIFEENKETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWMALGFSLAVYGA 66
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMST-GGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +S+MA+ ++++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +
Sbjct: 67 SYHSMSSMARASFSEDGSLMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYIWSFW 126
Query: 120 LVIPAFGAY 128
L+ P Y
Sbjct: 127 LLAPGRALY 135
>sp|Q9BTX3|TM208_HUMAN Transmembrane protein 208 OS=Homo sapiens GN=TMEM208 PE=2 SV=1
Length = 173
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
+ +G K+ EEN ++ R+I+ N IY +V ++ F+S+ ++ W+ L + Y
Sbjct: 7 VGTRGKKQIFEENRETLKFYLRIILGANAIYCLVTLVFFYSSASFWAWLALGFSLAVYGA 66
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMST-GGICGYLHDVIYITSFVQVMSILSEKFWYTY 119
Y +S+MA+ +++DG L+DGG D++ G+ +L DVI +T+ VQV+S S W +
Sbjct: 67 SYHSMSSMARAAFSEDGALMDGGMDLNMEQGMAEHLKDVILLTAIVQVLSCFSLYVWSFW 126
Query: 120 LVIPAFGAY 128
L+ P Y
Sbjct: 127 LLAPGRALY 135
>sp|Q5ZK32|TM208_CHICK Transmembrane protein 208 OS=Gallus gallus GN=TMEM208 PE=2 SV=1
Length = 179
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 12/157 (7%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN + R+I+ + +Y V +++F+ + W+ +S Y Y+ +S+MA+
Sbjct: 17 EENRETLRFYLRIILGASAVYAAVNLVVFYPAASAWTWLAFAFSSAVYGASYRSMSSMAR 76
Query: 71 PTYTDDGELIDGGFDMST----GGICGYLH------DVIYITSFVQVMSILSEKFWYTYL 120
P + DDG L DGG D++ C + H DVI +T+ VQV+S S WY +L
Sbjct: 77 PAFADDGSLADGGIDLNMEQGWQSECPHPHEPRHLKDVILLTAMVQVLSCFSLYVWYFWL 136
Query: 121 VIPAFGAYQSFGFIKG--FLPQGSEGDTEDEKTRKKR 155
+ P Y + I G F + S E + +++R
Sbjct: 137 LAPGRALYLLWVNILGPWFTAESSAPGQEPNEKKQRR 173
>sp|Q0IHJ0|TM208_XENLA Transmembrane protein 208 OS=Xenopus laevis GN=tmem208 PE=2 SV=1
Length = 174
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 11 EENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAIPYQQLSAMAK 70
EEN + R+I+ V+ + + +F+S+ + W LV + + YA Y+ + +MA+
Sbjct: 17 EENKETLSFYLRIILGATVLCGAINLGVFYSSSNFWTWATLVFSGIVYAGAYRSMRSMAQ 76
Query: 71 PTYTDDGELIDGGFDMST-GGICGYLHDVIYITSFVQVMSILSEKFWYTYLVIPAFGAY 128
++++DG L+DGG D++ G+ ++ D++ +T+ VQV+S S FWY +L+ P Y
Sbjct: 77 ASFSEDGSLLDGGIDLNMEQGMAEHIKDIVLLTAIVQVLSCFSLYFWYFWLLAPGRALY 135
>sp|Q99382|ENV10_YEAST Late endosome and vacuole interface protein 10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ENV10 PE=1
SV=1
Length = 181
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 8/169 (4%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
MA + +K+ NA+ ++ L + + + + +VR+ I T W+ LV +V +
Sbjct: 1 MAGKAGRKQASSNAKIIQGLYKQV-SLFLGMAIVRLFISRKV-TIGQWIKLVALNVPMFV 58
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMSTG-GICGYLHDVIYITSF--VQVMSILSEKFWY 117
+ KP Y D ++ G D++ + Y D+IY++ F + +++ + KFW+
Sbjct: 59 ALYIIVLSGKPKY-DGNRVVKQGIDLNDNTNLISYFFDLIYLSLFGNIGIIAFRTFKFWW 117
Query: 118 TYLVIPAFGAYQSFGFIKGFLP--QGSEGDTEDEKTRKKREKMEKKTSR 164
L+ P + Y+ +G F+P Q ++ D + + + K +++ R
Sbjct: 118 CLLLCPIYAGYKLYGLKNMFMPGAQQTQADNRSKNANEGQSKSKRQMKR 166
>sp|O14193|MUG69_SCHPO Meiotically up-regulated gene 69 protein OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mug69 PE=1 SV=4
Length = 192
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 2/131 (1%)
Query: 1 MANQGAKKRKEENARHMEKLRRLIIACNVIYFVVRMIIFHSTFTWKHWVGLVLTSVAYAI 60
MAN KK +N + + + NV+++++R + + +V S++
Sbjct: 1 MANAAQKKLAAQNKHILTFMLAADLIVNVLFWILRFFVRSGLSKFSKFV-YAFASISSGF 59
Query: 61 PYQQLSAMAKPTYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSIL-SEKFWYTY 119
+ QL A P Y G L+ G D+ G+ Y+ D +Y + + ++ L S K + Y
Sbjct: 60 LHYQLHRAAAPKYDARGSLLYVGQDLLQEGVTSYMVDYMYFSWILIFLAALTSVKVFAFY 119
Query: 120 LVIPAFGAYQS 130
L++P F Y++
Sbjct: 120 LLVPIFVVYKA 130
>sp|Q1ZXI9|FSLO_DICDI Frizzled and smoothened-like protein O OS=Dictyostelium discoideum
GN=fslO PE=3 SV=1
Length = 695
Score = 30.8 bits (68), Expect = 4.0, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 26 ACNVIYFVVRMIIFHSTFTWKHW--VGLVLTSVAYAIPYQQLSAM------------AKP 71
AC+ Y + +F + +T ++W V L +T++ AI Y A +
Sbjct: 242 ACS-FYLIFTFGVFPNKYTNRNWIIVYLGITAICLAISYAVQEARYGGGDWRCTSDPGRY 300
Query: 72 TYTDDGELIDGGFDMSTGGICGYLHDVIYITSFVQVMSILSEKFW 116
++DG I GGF GG+ L +Y M++++ K++
Sbjct: 301 KSSEDGTCILGGFFFQIGGLGTILFLSLYSFDMFLTMNMMTNKYF 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,149,878
Number of Sequences: 539616
Number of extensions: 2511476
Number of successful extensions: 7928
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 7909
Number of HSP's gapped (non-prelim): 20
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)