Query 030671
Match_columns 173
No_of_seqs 165 out of 1278
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 03:54:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030671.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030671hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bt6_A Adrenodoxin 1; rutheniu 99.9 4.2E-22 1.5E-26 146.6 8.3 98 55-167 4-107 (108)
2 3hui_A Ferredoxin; cytochrome 99.9 8.4E-22 2.9E-26 150.5 9.6 104 51-169 15-123 (126)
3 3lxf_A Ferredoxin; iron, iron- 99.9 8.4E-22 2.9E-26 145.1 9.0 96 59-169 2-102 (104)
4 2y5c_A Adrenodoxin-like protei 99.9 8.3E-22 2.8E-26 145.5 8.8 101 56-172 4-108 (109)
5 3ah7_A [2Fe-2S]ferredoxin; [2F 99.8 6.7E-21 2.3E-25 141.2 10.3 83 76-169 17-102 (113)
6 1xlq_A Putidaredoxin, PDX; [2F 99.8 7E-21 2.4E-25 139.5 10.2 87 76-171 13-106 (106)
7 1uwm_A Ferredoxin VI, FDVI; el 99.8 1.4E-20 4.9E-25 137.8 8.5 96 59-169 2-103 (106)
8 3n9z_C Adrenodoxin; cytochrome 99.8 4.5E-22 1.5E-26 151.3 0.0 98 55-167 3-106 (123)
9 2wlb_A ETP1-FD, electron trans 99.8 2.5E-20 8.4E-25 136.0 8.9 97 56-167 2-102 (103)
10 1b9r_A Protein (terpredoxin); 99.8 5.4E-21 1.8E-25 139.9 3.4 84 76-168 13-102 (105)
11 1i7h_A Ferredoxin; 2Fe-2S,elec 99.8 2E-19 6.9E-24 133.0 9.9 83 76-169 17-102 (111)
12 1l5p_A Ferredoxin; [2Fe-2S] cl 99.8 2.6E-19 8.9E-24 128.8 8.1 77 76-162 12-89 (93)
13 1frd_A Heterocyst [2Fe-2S] fer 99.7 9.6E-18 3.3E-22 121.0 6.2 76 76-169 16-93 (98)
14 1czp_A Ferredoxin I; [2Fe-2S] 99.7 1.1E-17 3.9E-22 120.9 6.4 89 58-169 3-93 (98)
15 1frr_A Ferredoxin I; electron 99.7 2.3E-17 8E-22 118.0 6.5 77 76-170 13-91 (95)
16 1a70_A Ferredoxin; iron-sulfur 99.7 2.1E-17 7.1E-22 119.5 5.7 76 76-169 14-91 (97)
17 1iue_A Ferredoxin; electron tr 99.7 3E-17 1E-21 118.8 6.5 76 76-169 14-91 (98)
18 1jq4_A Methane monooxygenase c 99.7 4.5E-18 1.5E-22 122.9 1.4 91 57-169 4-96 (98)
19 1awd_A Ferredoxin; electron tr 99.7 2.5E-17 8.7E-22 118.2 4.7 76 76-169 12-89 (94)
20 1wri_A Ferredoxin II, ferredox 99.7 4.5E-17 1.6E-21 116.8 5.3 76 76-170 13-90 (93)
21 1krh_A Benzoate 1,2-dioxygenas 99.6 3.5E-16 1.2E-20 133.0 6.1 93 57-169 3-97 (338)
22 1doi_A 2Fe-2S ferredoxin; halo 99.6 8.6E-16 2.9E-20 117.2 5.0 74 77-168 39-116 (128)
23 3zyy_X Iron-sulfur cluster bin 99.5 3.1E-15 1.1E-19 139.6 5.9 88 56-169 2-91 (631)
24 2pia_A Phthalate dioxygenase r 99.5 3.3E-14 1.1E-18 120.7 9.4 71 77-166 248-320 (321)
25 2bs2_B Quinol-fumarate reducta 98.9 1.8E-09 6E-14 88.6 6.4 88 57-169 6-95 (241)
26 2wdq_B Succinate dehydrogenase 98.8 7.8E-09 2.7E-13 84.4 6.3 88 57-169 4-95 (238)
27 1kf6_B Fumarate reductase iron 98.8 7E-09 2.4E-13 85.0 6.0 88 57-169 7-94 (243)
28 3vr8_B Iron-sulfur subunit of 98.7 4.3E-08 1.5E-12 83.5 7.9 91 56-170 36-128 (282)
29 2h88_B Succinate dehydrogenase 98.7 3.9E-08 1.3E-12 81.5 6.8 89 57-170 13-104 (252)
30 1t3q_A Quinoline 2-oxidoreduct 98.5 1.2E-07 4.1E-12 74.8 5.4 56 76-162 21-78 (168)
31 3i9v_3 NADH-quinone oxidoreduc 98.3 9.5E-07 3.2E-11 83.7 6.3 74 77-168 10-96 (783)
32 3c8y_A Iron hydrogenase 1; dit 98.0 6E-06 2.1E-10 75.9 6.8 65 76-167 9-74 (574)
33 1rm6_C 4-hydroxybenzoyl-COA re 97.9 1E-05 3.4E-10 63.6 5.2 52 76-155 14-66 (161)
34 1n62_A Carbon monoxide dehydro 97.7 3E-05 1E-09 61.3 4.7 52 76-155 15-67 (166)
35 1ffv_A CUTS, iron-sulfur prote 97.7 3.1E-05 1.1E-09 61.0 4.4 52 76-155 15-67 (163)
36 3hrd_D Nicotinate dehydrogenas 97.5 9.8E-05 3.4E-09 58.1 4.5 52 76-155 15-67 (160)
37 2w3s_A Xanthine dehydrogenase; 96.2 0.0023 7.9E-08 57.6 3.1 56 76-155 12-68 (462)
38 1vlb_A Aldehyde oxidoreductase 96.2 0.003 1E-07 61.1 3.9 53 76-155 13-65 (907)
39 1dgj_A Aldehyde oxidoreductase 96.0 0.0046 1.6E-07 59.7 4.1 52 77-155 14-65 (907)
40 3nvw_A Xanthine dehydrogenase/ 95.6 0.0085 2.9E-07 47.3 3.7 39 77-122 16-55 (164)
41 1y56_A Hypothetical protein PH 94.3 0.043 1.5E-06 48.5 4.8 54 56-122 14-67 (493)
42 2gag_A Heterotetrameric sarcos 88.4 0.88 3E-05 43.8 7.0 54 56-122 21-79 (965)
43 1ep3_B Dihydroorotate dehydrog 85.4 0.46 1.6E-05 38.1 2.7 32 89-122 208-239 (262)
44 3unc_A Xanthine dehydrogenase/ 84.6 0.91 3.1E-05 45.7 4.9 37 79-122 19-56 (1332)
45 3kwl_A Uncharacterized protein 75.5 3.7 0.00013 37.0 5.4 53 58-126 27-79 (514)
46 3u7z_A Putative metal binding 72.8 5.7 0.00019 28.6 4.8 39 55-100 6-44 (101)
47 3zyv_A AOH1; oxidoreductase, m 62.7 5.7 0.00019 39.9 4.0 39 79-123 23-61 (1335)
48 3kdv_A DDRB, DNA damage respon 35.9 32 0.0011 27.0 3.5 37 53-96 3-39 (184)
49 2bb6_A TCII, TC II, transcobal 32.6 70 0.0024 28.2 5.7 37 56-96 315-351 (414)
50 2l32_A Small archaeal modifier 30.4 51 0.0017 21.7 3.5 23 76-99 13-35 (74)
51 1xn7_A Hypothetical protein YH 28.6 22 0.00076 23.9 1.4 30 86-118 36-65 (78)
52 2k02_A Ferrous iron transport 22.2 48 0.0016 22.8 2.2 29 86-117 36-64 (87)
No 1
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=99.86 E-value=4.2e-22 Score=146.64 Aligned_cols=98 Identities=26% Similarity=0.442 Sum_probs=80.6
Q ss_pred CCcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCcc--ccCCCcCCCCCceeecCcEEEEecCc-ccCCCC
Q 030671 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNER 131 (173)
Q Consensus 55 ~~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~--~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~ 131 (173)
..+++|+|..+ ++. .++|.+.+|+||| +||+++||+++ + +|+|.|.||||+|+|.+|+ ..++++
T Consensus 4 ~~m~~V~~~~~----~g~--~~~v~~~~g~tLL-~aa~~~gi~i~~~~------~Cgg~G~CgtC~v~v~~g~~~~l~~~ 70 (108)
T 2bt6_A 4 GDKITVHFINR----DGE--TLTTKGKIGDSLL-DVVVQNNLDIDGFG------ACEGTLACSTCHLIFEQHIFEKLEAI 70 (108)
T ss_dssp -CEEEEEEECT----TSC--EEEEEEETTCBHH-HHHHHTTCCCTTTT------TTSSSSSBSTTEEECCHHHHTTSCCC
T ss_pred CceEEEEEECC----CCC--EEEEEECCCChHH-HHHHHcCCCCCccc------CCCCCcCcCCCEEEECccccccCCCC
Confidence 45788999854 222 2577999999999 99999999999 8 9998999999999999996 677889
Q ss_pred ChHHHhccCC---CCCCeEEeeeeEeeecCCCccEEEEe
Q 030671 132 TNTELRYLKK---KPESWRLACQTIVGNKENSGKVVVQR 167 (173)
Q Consensus 132 t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~ 167 (173)
++.|.++|+. ..+++|||||+++. .+++ +++|++
T Consensus 71 ~~~E~~~L~~~~~~~~g~rLaCq~~~~-~d~d-~~~V~~ 107 (108)
T 2bt6_A 71 TDEENDMLDLAYGLTDRSRLGCQICLT-KAMD-NMTVRV 107 (108)
T ss_dssp CHHHHHHHTTCTTCCTTEEEGGGCBCC-GGGT-TEEEEC
T ss_pred CHHHHHHHhCcccCCCCcEeeEEEEec-CCCC-CEEEEc
Confidence 9999999985 38999999999998 3332 377753
No 2
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=99.86 E-value=8.4e-22 Score=150.47 Aligned_cols=104 Identities=22% Similarity=0.379 Sum_probs=85.7
Q ss_pred CCCCCCcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCc-ccC
Q 030671 51 PEPEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLL 128 (173)
Q Consensus 51 ~~~~~~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l 128 (173)
.+.+..+++|+|.++ +|. .++|.+.+|+||| ++|+++||+ +++ .|+|.|.||||+|+|.+|+ ..+
T Consensus 15 ~~~~~~M~~Vt~~~~----~G~--~~~v~~~~G~tLL-~aa~~~gi~gi~~------~C~G~G~CgtC~v~v~~G~~~~l 81 (126)
T 3hui_A 15 VPRGSHMAKINFVDH----TGE--TRTVEVEEGATVM-EAAIRNAIPGVEA------ECGGACACATCHVYVDEAWREKV 81 (126)
T ss_dssp CCTTCSEEEEEEECT----TSC--EEEEEEETTSBHH-HHHHTTTCTTCCC------TTSSSSCCSTTEEEECGGGHHHH
T ss_pred cCCCCCceEEEEEeC----CCC--EEEEEECCCCcHH-HHHHHcCCCCCcc------CCCCCCCCCCCEEEECCCccccc
Confidence 445667899999854 332 2577999999999 999999999 998 9999999999999999997 567
Q ss_pred CCCChHHHhccCC---CCCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 129 NERTNTELRYLKK---KPESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 129 ~~~t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
+++++.|+++|+. ..+++||+||+++. .+++| ++|++-+
T Consensus 82 ~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~-~dldg-l~V~lp~ 123 (126)
T 3hui_A 82 GGPSPMEEDMLDFGYDVRPNSRLSCQIKVS-NELDG-LIVTTPE 123 (126)
T ss_dssp CCCCHHHHHHHTTSSSCCTTEEEGGGCBCC-GGGTT-EEEECCS
T ss_pred CCCCHHHhhhcCchhhccCCeEEeeeCEEC-cCCCc-EEEEecC
Confidence 8899999999984 37899999999998 33333 7887643
No 3
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=99.86 E-value=8.4e-22 Score=145.10 Aligned_cols=96 Identities=29% Similarity=0.460 Sum_probs=80.0
Q ss_pred EEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChHHH
Q 030671 59 ELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTEL 136 (173)
Q Consensus 59 ~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~ 136 (173)
+|+|+++ ||. .++|.+.+|+||| ++|+++|++ +++ +|+|.|.||||+|+|.+|+ ..++++++.|.
T Consensus 2 ~vt~~~~----~G~--~~~~~~~~g~tll-~a~~~~gi~~i~~------~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~ 68 (104)
T 3lxf_A 2 AILVTTR----DGT--RTEIQAEPGLSLM-EALRDAGIDELLA------LCGGCCSCATCHVLVAPAFADRLPALSGDEN 68 (104)
T ss_dssp EEEEECT----TSC--EEEEECCTTSBHH-HHHHHTTCTTCCC------TTCSSSSCSTTEEEECGGGGGGSCCCCHHHH
T ss_pred EEEEEeC----CCC--EEEEEECCCChHH-HHHHHcCCCCCCc------CCCCCCCCCCCEEEECCcccccCCCCCHHHH
Confidence 5778865 333 2578999999999 999999999 999 9999999999999999997 56888999999
Q ss_pred hccCC---CCCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 137 RYLKK---KPESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 137 ~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
.+|+. ..+++||+||+++. .+++| ++|++-+
T Consensus 69 ~~L~~~~~~~~g~rLaCq~~~~-~dl~g-l~v~ip~ 102 (104)
T 3lxf_A 69 DLLDSSDHRTPHSRLSCQITIN-DKLEG-LEVEIAP 102 (104)
T ss_dssp HHHHTSTTCCTTEEEGGGCBCC-GGGTT-CEEEECC
T ss_pred HHhccccccCCCcEEEeeCEEc-cCCCC-EEEEecC
Confidence 99976 37899999999998 33333 7777643
No 4
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=99.86 E-value=8.3e-22 Score=145.46 Aligned_cols=101 Identities=22% Similarity=0.374 Sum_probs=81.6
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChH
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNT 134 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~ 134 (173)
.+++|+|+.+ +|.. ++|.+++|+||| ++|+++||++++ +|+|.|.||||+|+|.+|+ ..++++++.
T Consensus 4 ~m~~v~~~~~----~g~~--~~~~~~~g~tlL-~aa~~~gi~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~ 70 (109)
T 2y5c_A 4 DVVNVVFVDR----SGQR--IPVSGRVGDNVL-HLAQRHGVDLEG------ACEASLACSTCHVYVSEDHLDLLPPPEER 70 (109)
T ss_dssp CEEEEEEECT----TSCE--EEEEEETTCBHH-HHHHHTTCCCCC------TTSSSSSCCTTEEEECHHHHTTSCCCCHH
T ss_pred CcEEEEEEcC----CCCE--EEEEECCCCcHH-HHHHHcCCCCCc------CCCCCcCcCccEEEECCcchhhcCCCCHH
Confidence 4688889754 2321 467899999999 999999999999 9998899999999999996 667889999
Q ss_pred HHhccCC---CCCCeEEeeeeEeeecCCCccEEEEeCCCCC
Q 030671 135 ELRYLKK---KPESWRLACQTIVGNKENSGKVVVQRIPQWK 172 (173)
Q Consensus 135 E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~~p~~~ 172 (173)
|..+|+. ..+++||+||+++. .+++ +++|.+ |++.
T Consensus 71 E~~~L~~~~~~~~g~rLaCq~~~~-~d~~-~~~v~i-p~~~ 108 (109)
T 2y5c_A 71 EDDMLDMAPLLQENSRLGCQIVLT-PELE-GAEFTL-PKIT 108 (109)
T ss_dssp HHHHHHTSTTCCTTEEEGGGCBCC-GGGT-TCEEEC-CSCC
T ss_pred HHHHHhccccCCCCcEeeEEeEEe-cCCC-eEEEEe-cCCC
Confidence 9999973 38999999999998 2222 277764 5543
No 5
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=99.84 E-value=6.7e-21 Score=141.24 Aligned_cols=83 Identities=28% Similarity=0.460 Sum_probs=74.1
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeee
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~ 152 (173)
++|.+++|+||| +||+++||++++ .|+|.|.||+|+|+|.+|...++++++.|..+|+. ..+++||+||+
T Consensus 17 ~~v~~~~g~tlL-~aa~~~Gi~i~~------~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (113)
T 3ah7_A 17 LTVEVKPGTNIL-ELAHDHHIEMES------ACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQV 89 (113)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGC
T ss_pred eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeC
Confidence 577999999999 999999999999 99989999999999999987888889999999974 37899999999
Q ss_pred EeeecCCCccEEEEeCC
Q 030671 153 IVGNKENSGKVVVQRIP 169 (173)
Q Consensus 153 ~v~~~e~~gdv~V~~~p 169 (173)
++. +++++|++.+
T Consensus 90 ~~~----~~dl~v~~~~ 102 (113)
T 3ah7_A 90 FVA----DEDLTIEIPK 102 (113)
T ss_dssp BCC----SSCEEEECCS
T ss_pred EEe----CCCEEEEECc
Confidence 985 3589998654
No 6
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=99.84 E-value=7e-21 Score=139.51 Aligned_cols=87 Identities=29% Similarity=0.519 Sum_probs=74.3
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChHHHhccCC---C-CCCeEEe
Q 030671 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLKK---K-PESWRLA 149 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~~---~-~~g~RLa 149 (173)
++|.+++|+||| ++|+++||+ +++ +|+|.|.||||+|+|.+|+ ..++++++.|+++|+. . .+++||+
T Consensus 13 ~~~~~~~g~tlL-eaa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (106)
T 1xlq_A 13 RELDVADGVSLM-QAAVSNGIYDIVG------DCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLC 85 (106)
T ss_dssp EEEECCTTCBHH-HHHHHTTCTTSCC------TTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEG
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCCc------CCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 577999999999 999999999 999 9998999999999999996 5678889999999986 3 6899999
Q ss_pred eeeEeeecCCCccEEEEeCC-CC
Q 030671 150 CQTIVGNKENSGKVVVQRIP-QW 171 (173)
Q Consensus 150 CQ~~v~~~e~~gdv~V~~~p-~~ 171 (173)
||+++. .+++ +++|.+.+ ||
T Consensus 86 Cq~~~~-~d~~-~l~v~~p~~~~ 106 (106)
T 1xlq_A 86 CQIIMT-PELD-GIVVDVPDRQW 106 (106)
T ss_dssp GGCBCC-GGGT-TEEEECCSCCC
T ss_pred eeeEee-cCCC-CEEEEecCccC
Confidence 999998 2221 58888744 55
No 7
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=99.83 E-value=1.4e-20 Score=137.82 Aligned_cols=96 Identities=26% Similarity=0.384 Sum_probs=78.0
Q ss_pred EEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChHHH
Q 030671 59 ELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTEL 136 (173)
Q Consensus 59 ~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~ 136 (173)
+|+|+.+ +|. .++|.+++|+||| ++|+++||+ +++ +|+|.|.||||+|+|.+|+ ..++++++.|+
T Consensus 2 ~v~~~~~----~g~--~~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~ 68 (106)
T 1uwm_A 2 KIIFIEH----NGT--RHEVEAKPGLTVM-EAARDNGVPGIDA------DCGGACACSTCHAYVDPAWVDKLPKALPTET 68 (106)
T ss_dssp EEEEECT----TCC--EEEEECCTTSBHH-HHHHTTTCTTCCC------TTSSSSSSCTTEEEECHHHHTTSCCCCHHHH
T ss_pred EEEEEeC----CCC--EEEEEECCCCcHH-HHHHHcCCCCccc------CCCCCCCcCcCEEEECCcccccCCCCCHHHH
Confidence 5677533 232 1577999999999 999999999 999 9998999999999999996 66788999999
Q ss_pred hccCCC---C-CCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 137 RYLKKK---P-ESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 137 ~~L~~~---~-~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
++|+.. . +++||+||+++. .+++ +++|++.+
T Consensus 69 ~~L~~~~~~~~~g~rLaCq~~~~-~d~~-~l~v~~p~ 103 (106)
T 1uwm_A 69 DMIDFAYEPNPATSRLTCQIKVT-SLLD-GLVVHLPE 103 (106)
T ss_dssp HHHTTSSSCCTTTEEEGGGCBCC-GGGT-TEEEECCS
T ss_pred HHhcCccccCCCCcEecccCEEc-cCCC-CEEEEecC
Confidence 999863 5 899999999998 2221 48887643
No 8
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=99.82 E-value=4.5e-22 Score=151.34 Aligned_cols=98 Identities=26% Similarity=0.453 Sum_probs=25.7
Q ss_pred CCcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCcc--ccCCCcCCCCCceeecCcEEEEecC-cccCCCC
Q 030671 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELY--ATYGKVMNCGGGGSCGTCIVEIIDG-KDLLNER 131 (173)
Q Consensus 55 ~~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~--~~~~~~~~C~G~G~CGTC~V~V~~G-~~~l~~~ 131 (173)
..+++|+|+++. |.- ++|.+.+|+||| ++|+++||+++ + .|+|.|.||||+|+|.+| ...|+++
T Consensus 3 ~~~v~Vtf~~~~----G~~--~~v~~~~G~tLl-~aa~~~gi~i~g~~------~CgG~g~CgtC~v~v~~~~~~~l~~~ 69 (123)
T 3n9z_C 3 EDKITVHFINRD----GET--LTTKGKVGDSLL-DVVVENNLDIDGFG------ACEGTLACSTCHLIFEDHIYEKLDAI 69 (123)
T ss_dssp -----------------------------------------------C------TTCSSSSCSTTBC-------------
T ss_pred CCcEEEEEEeCC----CCE--EEEEECCCCcHH-HHHHHcCCCCCcCC------CCCCCCEeCCCeeEEeccccccCCCC
Confidence 467889998642 221 467899999999 99999999999 7 999999999999999964 4778899
Q ss_pred ChHHHhccCC---CCCCeEEeeeeEeeecCCCccEEEEe
Q 030671 132 TNTELRYLKK---KPESWRLACQTIVGNKENSGKVVVQR 167 (173)
Q Consensus 132 t~~E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~ 167 (173)
++.|.++|+. ..+++|||||+++. .+++ +++|++
T Consensus 70 ~~~E~~~L~~~~~~~~~~RLaCQ~~v~-~~ld-~l~V~i 106 (123)
T 3n9z_C 70 TDEENDMLDLAYGLTDRSRLGCQICLT-KSMD-NMTVRV 106 (123)
T ss_dssp -CHHHHHHCC--------CBCC-----------------
T ss_pred ChHHHhhhcccccccCCeEEeeEeEEc-cCCC-CEEEEE
Confidence 9999999985 27899999999998 4443 466664
No 9
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=99.82 E-value=2.5e-20 Score=135.95 Aligned_cols=97 Identities=28% Similarity=0.503 Sum_probs=78.6
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChH
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNT 134 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~ 134 (173)
+.++|+|.++ ++. .++|.+.+|+||| ++|+++|+++++ .|+|.|.||+|+|+|.+|+ ..++++++.
T Consensus 2 ~~~~v~~~~~----~g~--~~~~~~~~g~tlL-~a~~~~gi~i~~------~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~ 68 (103)
T 2wlb_A 2 TGIKVFFVTP----EGR--EIMIEGNEGDSIL-DLAHANNIDLEG------ACEGSVACSTCHVIVDPEHYELLDPPEED 68 (103)
T ss_dssp CCEEEEEECT----TCC--EEEEEECTTCBHH-HHHHHTTCCCCC------TTTTSSCCSTTEEEECHHHHHHSCCCCHH
T ss_pred CceEEEEEeC----CCC--EEEEEECCCCHHH-HHHHHcCCCcCc------CCCCCCCcCCCEEEECCCchhccCCCCHH
Confidence 3467888732 232 1567899999999 999999999999 9999999999999999997 457888899
Q ss_pred HHhccCC---CCCCeEEeeeeEeeecCCCccEEEEe
Q 030671 135 ELRYLKK---KPESWRLACQTIVGNKENSGKVVVQR 167 (173)
Q Consensus 135 E~~~L~~---~~~g~RLaCQ~~v~~~e~~gdv~V~~ 167 (173)
|.++|+. ..+++||+||+++. .+++| ++|++
T Consensus 69 E~~~L~~~~~~~~g~rLaCq~~~~-~d~~~-l~v~l 102 (103)
T 2wlb_A 69 EEDMLDLAFGLEETSRLGCQVLLR-KDLDG-IRVRI 102 (103)
T ss_dssp HHHHHTTBTTCCTTEEEGGGCBCC-GGGTT-EEEEC
T ss_pred HHHHHhcccCCCCCcEeeEeeEeC-CCCCc-EEEEc
Confidence 9999987 37899999999998 22222 77764
No 10
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=99.81 E-value=5.4e-21 Score=139.89 Aligned_cols=84 Identities=26% Similarity=0.489 Sum_probs=71.8
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCc-ccCCCCChHHHhccC--C--CCCCeEEe
Q 030671 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGK-DLLNERTNTELRYLK--K--KPESWRLA 149 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~-~~l~~~t~~E~~~L~--~--~~~g~RLa 149 (173)
++|.+++|+||| ++|+++|++ +++ +|+|.|.||||+|+|.+|+ ..++++++.|+++|+ . ..+++||+
T Consensus 13 ~~~~~~~g~tlL-~aa~~~gi~~i~~------~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLa 85 (105)
T 1b9r_A 13 YAVDAQDGQSLM-EVATQNGVPGIVA------ECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLS 85 (105)
T ss_dssp EEEECCTTCCTT-HHHHHHTCCCCCC------SSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCG
T ss_pred EEEEECCCChHH-HHHHHcCCCCcCc------CCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEee
Confidence 577999999999 999999999 999 9999999999999999996 566788888989998 3 37899999
Q ss_pred eeeEeeecCCCccEEEEeC
Q 030671 150 CQTIVGNKENSGKVVVQRI 168 (173)
Q Consensus 150 CQ~~v~~~e~~gdv~V~~~ 168 (173)
||+++. .+++ +++|++-
T Consensus 86 Cq~~~~-~~~~-~l~v~~p 102 (105)
T 1b9r_A 86 CQVFID-PSMD-GLIVRVP 102 (105)
T ss_dssp GGCCCC-TTST-TEEEECC
T ss_pred eeCEec-CCCC-cEEEEec
Confidence 999998 2222 5888764
No 11
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=99.80 E-value=2e-19 Score=132.99 Aligned_cols=83 Identities=33% Similarity=0.431 Sum_probs=73.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeee
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQT 152 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~ 152 (173)
++|.+.+|+||| ++|+++|+++++ .|+|.|.||+|+|+|.+|...+.+++..|..+|+. ..+++||+||+
T Consensus 17 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~ 89 (111)
T 1i7h_A 17 AVLEANSGETIL-DAALRNGIEIEH------ACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQA 89 (111)
T ss_dssp EEEECCTTCBHH-HHHHHTTCCCCC------TTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTC
T ss_pred eEEEeCCCCcHH-HHHHHcCCCCcc------cCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEE
Confidence 567999999999 999999999999 99879999999999999998888888999998885 36899999999
Q ss_pred EeeecCCCccEEEEeCC
Q 030671 153 IVGNKENSGKVVVQRIP 169 (173)
Q Consensus 153 ~v~~~e~~gdv~V~~~p 169 (173)
++. .++++|++.+
T Consensus 90 ~~~----~~dl~v~~~~ 102 (111)
T 1i7h_A 90 RVT----DEDLVVEIPR 102 (111)
T ss_dssp BCC----SSCEEEECCS
T ss_pred EEe----CCCEEEEECh
Confidence 984 2689998754
No 12
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=99.79 E-value=2.6e-19 Score=128.75 Aligned_cols=77 Identities=26% Similarity=0.579 Sum_probs=68.9
Q ss_pred EEEEecCCchHHHHHHHHCCCC-ccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDNKIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
++|.+.+|+||| ++|+++|++ +++ +|+|.|.||+|+|+|.+|. ++++++.|.++|++..+++||+||+++
T Consensus 12 ~~~~~~~g~tll-~a~~~~gi~gi~~------~C~G~G~Cg~C~v~v~~g~--~~~~~~~e~~~L~~~~~g~rLaCq~~~ 82 (93)
T 1l5p_A 12 KQLKFEDDQTLF-TVLTEAGLMSADD------TCQGNKACGKCICKHVSGK--VAAAEDDEKEFLEDQPANARLACAITL 82 (93)
T ss_dssp EEEECCTTEEHH-HHHHTTTSSCCTT------SCSSSSSSCCCEEEEEESC--CCCCCHHHHHHHTTSCTTEEEGGGCEE
T ss_pred EEEEECCCChHH-HHHHHcCCCcCCc------CCCCcCCcCCCEEEECCCc--CCCCCHHHHHHhcCCCCCcEEeeECEE
Confidence 477999999999 999999999 999 9999999999999999986 566788899999966899999999999
Q ss_pred eecCCCcc
Q 030671 155 GNKENSGK 162 (173)
Q Consensus 155 ~~~e~~gd 162 (173)
. .+++|.
T Consensus 83 ~-~d~~g~ 89 (93)
T 1l5p_A 83 S-GENDGA 89 (93)
T ss_dssp C-GGGTTC
T ss_pred C-CCCCce
Confidence 8 677664
No 13
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=99.71 E-value=9.6e-18 Score=120.98 Aligned_cols=76 Identities=20% Similarity=0.402 Sum_probs=64.4
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
++|.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|..+|+.. .+++||+||++
T Consensus 16 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaC~~~ 82 (98)
T 1frd_A 16 TTIEIDEETTIL-DGAEENGIELPF------SCH-SGSCSSCVGKVVEGEVDQ-----SDQIFLDDEQMGKGFALLCVTY 82 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CCCCCCCEEEEEeCCccc-----cccccCCHHHhhCCcEEEeECE
Confidence 567899999999 999999999999 998 899999999999997532 244566553 57899999999
Q ss_pred eeecCCCccEEEEeCC
Q 030671 154 VGNKENSGKVVVQRIP 169 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p 169 (173)
+. ++++|+..+
T Consensus 83 ~~-----~d~~v~~~~ 93 (98)
T 1frd_A 83 PR-----SNCTIKTHQ 93 (98)
T ss_dssp ES-----SSEEEECCC
T ss_pred EC-----CCEEEEecc
Confidence 98 889998754
No 14
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=99.71 E-value=1.1e-17 Score=120.90 Aligned_cols=89 Identities=18% Similarity=0.366 Sum_probs=69.8
Q ss_pred EEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHh
Q 030671 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELR 137 (173)
Q Consensus 58 i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~ 137 (173)
.+|+|..+ ++.. .+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|..
T Consensus 3 ~~V~~~~~----~~~~-~~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~ 64 (98)
T 1czp_A 3 FKVTLINE----AEGT-KHEIEVPDDEYIL-DAAEEQGYDLPF------SCR-AGACSTCAGKLVSGTVDQ-----SDQS 64 (98)
T ss_dssp EEEEEEET----TTTE-EEEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCC
T ss_pred eEEEEEeC----CCCC-cEEEEeCCCCCHH-HHHHHcCCCccC------CCC-CCCCCCCeEEEccCCcCc-----cccc
Confidence 56777643 1100 1467899999999 999999999999 998 899999999999998532 2444
Q ss_pred ccCCC--CCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 138 YLKKK--PESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 138 ~L~~~--~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
+|+.. .+++||+||+++. +|++|++.+
T Consensus 65 ~L~~~e~~~g~~LaCq~~~~-----~d~~v~~~~ 93 (98)
T 1czp_A 65 FLDDDQIEAGYVLTCVAYPT-----SDVVIQTHK 93 (98)
T ss_dssp SSCHHHHHTTEEEGGGCEES-----SCEEEECCC
T ss_pred cCCHHHhhCCeEEeeeCEEC-----CCEEEEecc
Confidence 56543 5789999999998 889998755
No 15
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.69 E-value=2.3e-17 Score=117.98 Aligned_cols=77 Identities=19% Similarity=0.414 Sum_probs=64.9
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|..+|+.. .+++||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~~~~~L~~~~~~~g~~LaC~~~ 79 (95)
T 1frr_A 13 FTLDVPEGTTIL-DAAEEAGYDLPF------SCR-AGACSSCLGKVVSGSVDE-----SEGSFLDDGQMEEGFVLTCIAI 79 (95)
T ss_dssp EEEEECTTCCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CcCCCCCEEEEEeCCccc-----cccccCCHHHHhCCcEEeeECE
Confidence 467899999999 999999999999 998 899999999999997532 244556553 57899999999
Q ss_pred eeecCCCccEEEEeCCC
Q 030671 154 VGNKENSGKVVVQRIPQ 170 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p~ 170 (173)
+. ++++|+..++
T Consensus 80 ~~-----~~~~v~~~~~ 91 (95)
T 1frr_A 80 PE-----SDLVIETHKE 91 (95)
T ss_dssp ES-----SCEEEECCCT
T ss_pred EC-----CCEEEEEcch
Confidence 98 7899987653
No 16
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=99.69 E-value=2.1e-17 Score=119.47 Aligned_cols=76 Identities=20% Similarity=0.396 Sum_probs=64.4
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|..+|+.. .+++||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 80 (97)
T 1a70_A 14 VEFQCPDDVYIL-DAAEEEGIDLPY------SCR-AGSCSSCAGKLKTGSLNQ-----DDQSFLDDDQIDEGWVLTCAAY 80 (97)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSS-SSCSSTTEEEEEESCEEC-----TTCCSSCHHHHHHTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCeEEEccCCcCc-----cccccCCHHHhhCCeEEEeECE
Confidence 467899999999 999999999999 998 899999999999997532 344566553 57899999999
Q ss_pred eeecCCCccEEEEeCC
Q 030671 154 VGNKENSGKVVVQRIP 169 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p 169 (173)
+. +|++|++.+
T Consensus 81 ~~-----~d~~v~~~~ 91 (97)
T 1a70_A 81 PV-----SDVTIETHK 91 (97)
T ss_dssp ES-----SCEEEECCC
T ss_pred EC-----CCEEEEeCc
Confidence 98 889998755
No 17
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=99.69 E-value=3e-17 Score=118.78 Aligned_cols=76 Identities=24% Similarity=0.506 Sum_probs=64.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|... ..|...|+.. .+++||+||++
T Consensus 14 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~-----~~e~~~L~~~e~~~g~~LaCq~~ 80 (98)
T 1iue_A 14 KKIECNEDEYIL-DASERQNVELPY------SCR-GGSCSTCAAKLVEGEVD-----NDDQSYLDEEQIKKKYILLCTCY 80 (98)
T ss_dssp EEEEEETTSCHH-HHHHHTTCCCCC------SSC-SSSSSTTEEEEEESCEE-----CTTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEeCCCCcHH-HHHHHcCCCCCC------CCC-CCcCCCCEEEEeeCCcc-----ccccccCCHHHHhCCeEEEeECE
Confidence 467899999999 999999999999 998 89999999999999753 2344566553 68899999999
Q ss_pred eeecCCCccEEEEeCC
Q 030671 154 VGNKENSGKVVVQRIP 169 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p 169 (173)
+. ++++|++.+
T Consensus 81 ~~-----~d~~i~~~~ 91 (98)
T 1iue_A 81 PK-----SDCVIETHK 91 (98)
T ss_dssp ES-----SCEEEECCC
T ss_pred EC-----CCeEEEeCC
Confidence 98 899998755
No 18
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=99.68 E-value=4.5e-18 Score=122.86 Aligned_cols=91 Identities=22% Similarity=0.327 Sum_probs=71.2
Q ss_pred cEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHH
Q 030671 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (173)
Q Consensus 57 ~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (173)
+++|+|..+ |+ ..+++.+++|+||| ++|+++|+++++ .| |.|.||+|+|+|.+|...+. +.|.
T Consensus 4 ~~~v~~~~~----~~--~~~~~~~~~g~tlL-~a~~~~gi~i~~------~C-~~G~Cg~C~v~v~~G~~~~~---~~e~ 66 (98)
T 1jq4_A 4 VHTITAVTE----DG--ESLRFECRSDEDVI-TAALRQNIFLMS------SC-REGGCATCKALCSEGDYDLK---GCSV 66 (98)
T ss_dssp EEEEEEEET----TT--EEEEEEEESCCTHH-HHHHHHTCCCCC------SC-CSSCCCCCCBCEEECCCCCC---CSCT
T ss_pred cEEEEEEec----CC--CcEEEEeCCCChHH-HHHHHcCCCCcC------CC-CCCCCCCCEEEEEcCccccC---cccc
Confidence 467777632 11 12577899999999 999999999999 99 59999999999999985432 3455
Q ss_pred hccCCC--CCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 137 RYLKKK--PESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 137 ~~L~~~--~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
..|+.. .+++||+||+++. ++++|++.+
T Consensus 67 ~~L~~~~~~~g~~LaCq~~~~-----~d~~v~~~~ 96 (98)
T 1jq4_A 67 QALPPEEEEEGLVLLCRTYPK-----TDLEIELPY 96 (98)
T ss_dssp TTSCHHHHHHHCBCTTTCCSS-----CCSEEECSC
T ss_pred cccCHHHhcCCcEEEeeCEEC-----CCEEEEecC
Confidence 667553 5789999999998 789988643
No 19
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=99.67 E-value=2.5e-17 Score=118.24 Aligned_cols=76 Identities=16% Similarity=0.354 Sum_probs=64.7
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
+++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|..+|+.. .+++||+||++
T Consensus 12 ~~~~~~~g~tlL-~a~~~~gi~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~e~~~g~~LaCq~~ 78 (94)
T 1awd_A 12 ETIECPEDTYIL-DAAEEAGLDLPY------SCR-AGACSSCAGKVESGEVDQ-----SDQSFLDDAQMGKGFVLTCVAY 78 (94)
T ss_dssp EEEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSSCHHHHHTTEEEGGGCE
T ss_pred EEEEECCCCcHH-HHHHHcCCCCCc------CCC-CCcCCCCEEEEEeCCcCc-----cccccCCHHHHhCCcEEeeECE
Confidence 467899999999 999999999999 998 899999999999997532 244566553 57899999999
Q ss_pred eeecCCCccEEEEeCC
Q 030671 154 VGNKENSGKVVVQRIP 169 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p 169 (173)
+. ++++|++.+
T Consensus 79 ~~-----~d~~i~~~~ 89 (94)
T 1awd_A 79 PT-----SDVTILTHQ 89 (94)
T ss_dssp ES-----SCEEEECCC
T ss_pred EC-----CCEEEEecc
Confidence 98 899998765
No 20
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.67 E-value=4.5e-17 Score=116.84 Aligned_cols=76 Identities=25% Similarity=0.500 Sum_probs=64.2
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC--CCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK--PESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~--~~g~RLaCQ~~ 153 (173)
+++.+++|+||| ++|+++| ++++ .|+ .|.||+|+|+|.+|.... .|..+|+.. .+++||+||++
T Consensus 13 ~~~~~~~g~tlL-~a~~~~g-~i~~------~C~-~G~Cg~C~v~v~~G~~~~-----~e~~~L~~~~~~~g~~LaCq~~ 78 (93)
T 1wri_A 13 ITFDVEPGERLI-DIGSEKA-DLPL------SCQ-AGACSTCLGKIVSGTVDQ-----SEGSFLDDEQIEQGYVLTCIAI 78 (93)
T ss_dssp EEEEECTTSCHH-HHHHHHS-CCCC------SSS-SSSSSTTEEEEEESCEEC-----TTCCSCCHHHHHTTEEETTTCE
T ss_pred EEEEECCCCcHH-HHHHHCc-CCCC------CCC-CCCCCCCEEEEecCccCc-----cccccCCHHHHhCCcEEeeeCE
Confidence 467899999999 9999999 9999 998 899999999999997532 344566653 68899999999
Q ss_pred eeecCCCccEEEEeCCC
Q 030671 154 VGNKENSGKVVVQRIPQ 170 (173)
Q Consensus 154 v~~~e~~gdv~V~~~p~ 170 (173)
+. +|++|++.++
T Consensus 79 ~~-----~d~~v~~~~~ 90 (93)
T 1wri_A 79 PE-----SDVVIETHKE 90 (93)
T ss_dssp ES-----SCEEEECCCG
T ss_pred EC-----CCEEEEeccc
Confidence 98 8899987654
No 21
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.62 E-value=3.5e-16 Score=133.00 Aligned_cols=93 Identities=23% Similarity=0.308 Sum_probs=73.6
Q ss_pred cEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHH
Q 030671 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (173)
Q Consensus 57 ~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (173)
+.+|+|... |+. .+++.+++|+||| ++|+++|+++++ +|+ .|.||+|+|+|.+|...+. +.+.|.
T Consensus 3 ~~~v~~~~~----~~~--~~~~~~~~g~tll-~a~~~~gi~i~~------~C~-~g~Cg~C~v~v~~G~~~~~-~~~~~~ 67 (338)
T 1krh_A 3 NHQVALQFE----DGV--TRFICIAQGETLS-DAAYRQQINIPM------DCR-EGECGTCRAFCESGNYDMP-EDNYIE 67 (338)
T ss_dssp CEEEEEECT----TSC--EEEEEECTTCCHH-HHHHHTTCCCSC------SCS-SSSSCTTEEEEEECCEECC-GGGSCT
T ss_pred ceEEEEEEc----CCC--cEEEEeCCCCcHH-HHHHHcCCCccc------CCC-CcCCCCCEEEEecCcEecc-cCcccc
Confidence 466777632 111 2577999999999 999999999999 998 8999999999999986443 134566
Q ss_pred hccCCC--CCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 137 RYLKKK--PESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 137 ~~L~~~--~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
..|++. .+|+||+||+++. +|++|++.+
T Consensus 68 ~~l~~~~~~~g~~LaCq~~~~-----~~~~v~~~~ 97 (338)
T 1krh_A 68 DALTPEEAQQGYVLACQCRPT-----SDAVFQIQA 97 (338)
T ss_dssp TTCCHHHHHHTEEETTTCEES-----SSEEEEESS
T ss_pred ccCCHHHHhCCeEEEEeCEEC-----CCeEEEEec
Confidence 777753 6889999999998 789998744
No 22
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=99.59 E-value=8.6e-16 Score=117.23 Aligned_cols=74 Identities=18% Similarity=0.320 Sum_probs=62.0
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCC---CCCCeEEeeeeE
Q 030671 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKK---KPESWRLACQTI 153 (173)
Q Consensus 77 ~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~---~~~g~RLaCQ~~ 153 (173)
++.+++|+||| ++|+++|+++++ .|+ .|.||+|+|+|.+|.... .|...|+. ..+++||+||++
T Consensus 39 ~v~v~~g~tlL-~aa~~~Gi~i~~------~C~-~G~CgtC~v~v~~G~v~~-----~e~~~L~~~e~~~~g~rLaCq~~ 105 (128)
T 1doi_A 39 SLEVNEGEYIL-EAAEAQGYDWPF------SCR-AGACANCAAIVLEGDIDM-----DMQQILSDEEVEDKNVRLTCIGS 105 (128)
T ss_dssp EEECCTTSCHH-HHHHHTTCCCCC------SSS-SSSSSTTEEEEEESCEEE-----CCCSSSCHHHHHTSCEEEGGGEE
T ss_pred EEEECCCCcHH-HHHHHcCCCCcc------CCC-ccCCCCCEeEEecCCcCc-----hhhccCCHhHhccCCEEEEEEeE
Confidence 67899999999 999999999999 995 899999999999998532 24456665 268999999999
Q ss_pred eeecCCCcc-EEEEeC
Q 030671 154 VGNKENSGK-VVVQRI 168 (173)
Q Consensus 154 v~~~e~~gd-v~V~~~ 168 (173)
+. ++ |+|+..
T Consensus 106 ~~-----~d~i~i~~~ 116 (128)
T 1doi_A 106 PD-----ADEVKIVYN 116 (128)
T ss_dssp EC-----SSEEEEEEC
T ss_pred Ec-----CCeEEEEec
Confidence 98 66 777653
No 23
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=99.55 E-value=3.1e-15 Score=139.65 Aligned_cols=88 Identities=24% Similarity=0.515 Sum_probs=71.7
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHH
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E 135 (173)
.+.+|+|... + +++.+++|+||| ++++++|+++++ +|+|.|.||+|+|+|.+|.... .|
T Consensus 2 ~m~~V~~~~s----g-----~~v~v~~G~tLL-eAa~~aGi~ip~------~C~G~G~CGtC~v~V~~G~v~~-----~e 60 (631)
T 3zyy_X 2 AEYKVLFKPD----Q-----KEVAISENTNLM-EALNLAGINIKT------VCGGAGTCGKCLVRVVDGQKRV-----ES 60 (631)
T ss_dssp -CEEEEEETT----T-----EEEEECTTSCHH-HHHHHHTCCCCC------SCCCSSCCSTTEEEEEESCEEE-----SC
T ss_pred CceEEEEecC----C-----eEEEECCCCcHH-HHHHHcCCCCCc------CCCCCCcCCCCEEEEeeCcccc-----cc
Confidence 3567777631 1 567999999999 999999999999 9999999999999999998532 23
Q ss_pred HhccCCC--CCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 136 LRYLKKK--PESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 136 ~~~L~~~--~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
..+|++. .+++||+||+++. +|++|++.+
T Consensus 61 ~~~Ls~~e~~~G~rLaCqa~~~-----sDl~Ielp~ 91 (631)
T 3zyy_X 61 YGKLKQEEIAQGYVLACQTYPE-----SDLIIEIPF 91 (631)
T ss_dssp CTTCCHHHHHTTEEETTTEEEC-----SSEEEECCT
T ss_pred cccCCHHHhcCCcEEeeeCEEC-----CCEEEEecc
Confidence 4566653 6899999999998 899998754
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.52 E-value=3.3e-14 Score=120.69 Aligned_cols=71 Identities=15% Similarity=0.433 Sum_probs=60.0
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCC-CCCeEEeeeeEee
Q 030671 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKK-PESWRLACQTIVG 155 (173)
Q Consensus 77 ~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~-~~g~RLaCQ~~v~ 155 (173)
++.+++|+||| |+|+++|+++++ +|+ .|.||+|+|+|++|...+. + ..|++. .++++|+||+++.
T Consensus 248 ~~~~~~~~~ll-~a~~~~g~~~~~------~C~-~G~Cg~C~~~v~~G~~~~~-----~-~~l~~~e~~g~~L~C~~~~~ 313 (321)
T 2pia_A 248 SFEIPANRSIL-EVLRDANVRVPS------SCE-SGTCGSCKTALCSGEADHR-----D-MVLRDDEKGTQIMVCVSRAK 313 (321)
T ss_dssp EEEECTTSCHH-HHHHHTTCCCCC------SCS-SSSSCTTEEEEEESCEECC-----C-SSCCTTTTTTEEETTTCEES
T ss_pred EEEECCCCcHH-HHHHHcCCCCCC------CCC-CCCCCCCEEEEecCccccc-----c-CCCChHHHCCeEEEeEeEEC
Confidence 56889999999 999999999999 996 8999999999999986432 1 456553 2899999999998
Q ss_pred ecCCCcc-EEEE
Q 030671 156 NKENSGK-VVVQ 166 (173)
Q Consensus 156 ~~e~~gd-v~V~ 166 (173)
+| ++|+
T Consensus 314 -----~d~~~i~ 320 (321)
T 2pia_A 314 -----SAELVLD 320 (321)
T ss_dssp -----SSEEEEC
T ss_pred -----CCcEEEe
Confidence 76 7775
No 25
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=98.90 E-value=1.8e-09 Score=88.58 Aligned_cols=88 Identities=17% Similarity=0.353 Sum_probs=63.2
Q ss_pred cEEEEEEcCCCC-CCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHH
Q 030671 57 EIELEFIAPRAG-DDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTE 135 (173)
Q Consensus 57 ~i~v~f~~~~~~-~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E 135 (173)
+++|..+++..+ ....|+.+++.+.+|+||| |+|.+.|+.+..++....+|+ .|.||+|.|.| +|.
T Consensus 6 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~tlL-~~l~~~~~~~~~~l~~~~~c~-~g~Cg~C~v~i-~G~---------- 72 (241)
T 2bs2_B 6 TIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIF-IVLNMIRETYDPDLNFDFVCR-AGICGSCGMMI-NGR---------- 72 (241)
T ss_dssp EEEEEECCTTCTTCCCEEEEEEEECCTTCBHH-HHHHHHHHHTCTTCCCCCSSS-SSSSCTTEEEE-TTE----------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEeCCCCChHH-HHHHHhchhcCCCCccCCCCC-CCCCCCCEeEE-CCC----------
Confidence 355555555432 2234667789999999999 999987754333455567998 89999999999 675
Q ss_pred HhccCCCCCCeEEeeeeEeeecCCC-ccEEEEeCC
Q 030671 136 LRYLKKKPESWRLACQTIVGNKENS-GKVVVQRIP 169 (173)
Q Consensus 136 ~~~L~~~~~g~RLaCQ~~v~~~e~~-gdv~V~~~p 169 (173)
.+|||++.+. +.+ ..++|+.++
T Consensus 73 ----------~~~aC~~~~~--~~~g~~~~ie~l~ 95 (241)
T 2bs2_B 73 ----------PSLACRTLTK--DFEDGVITLLPLP 95 (241)
T ss_dssp ----------EEEGGGCBGG--GCTTSEEEEECCT
T ss_pred ----------eecchhCcHh--HcCCCeEEEecCC
Confidence 3699999886 333 347887765
No 26
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=98.78 E-value=7.8e-09 Score=84.43 Aligned_cols=88 Identities=23% Similarity=0.328 Sum_probs=63.9
Q ss_pred cEEEEEEcCCCCCCCCccEEEEEecC--CchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChH
Q 030671 57 EIELEFIAPRAGDDGSYPVERAKAIS--GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (173)
Q Consensus 57 ~i~v~f~~~~~~~d~~~~v~~v~v~~--G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~ 134 (173)
+++|..++++.+....|+.+++.+++ |+||| ++|++.|+..+ .++...+|+ .|.||.|.|.| +|.
T Consensus 4 ~~~i~R~~~~~~~~~~~~~~~v~~~~~~~~tll-~~l~~~~~~~~-~l~~~~~C~-~g~Cg~C~v~v-~G~--------- 70 (238)
T 2wdq_B 4 EFSIYRYNPDVDDAPRMQDYTLEADEGRDMMLL-DALIQLKEKDP-SLSFRRSCR-EGVCGSDGLNM-NGK--------- 70 (238)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEECCTTCCCBHH-HHHHHHHHHCT-TCCCCCSSS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEcCCCCCCCCceEEEEeecCCCCCChHH-HHHHHhcccCC-CccccccCC-CCCCCCCEEEE-CCE---------
Confidence 45666666644223456777899999 99999 99999986532 466677998 89999999998 464
Q ss_pred HHhccCCCCCCeEEeeeeEeeec--CCCccEEEEeCC
Q 030671 135 ELRYLKKKPESWRLACQTIVGNK--ENSGKVVVQRIP 169 (173)
Q Consensus 135 E~~~L~~~~~g~RLaCQ~~v~~~--e~~gdv~V~~~p 169 (173)
.+|||++.+. . ..++.++|+.++
T Consensus 71 -----------~~laC~~~~~-~~g~~~~~~~ie~l~ 95 (238)
T 2wdq_B 71 -----------NGLACITPIS-ALNQPGKKIVIRPLP 95 (238)
T ss_dssp -----------EEEGGGCBGG-GTCCTTSCEEEECCT
T ss_pred -----------EEcccccchh-hhccCCCCEEEeeCC
Confidence 3789999887 3 213447888665
No 27
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=98.78 E-value=7e-09 Score=84.96 Aligned_cols=88 Identities=18% Similarity=0.258 Sum_probs=62.9
Q ss_pred cEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHH
Q 030671 57 EIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTEL 136 (173)
Q Consensus 57 ~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~ 136 (173)
+++|..++++.+....|+.+++.+++|+||| +||++.|+....++....+|+ .|.||+|.|+| +|.
T Consensus 7 ~~~i~R~~~~~~~~~~~~~~~~~~~~~~tll-~al~~~~~~~~p~l~~~~~c~-~G~Cg~C~v~v-~G~----------- 72 (243)
T 1kf6_B 7 KIEVVRYNPEVDTAPHSAFYEVPYDATTSLL-DALGYIKDNLAPDLSYRWSCR-MAICGSCGMMV-NNV----------- 72 (243)
T ss_dssp EEEEEECCTTTCSSCEEEEEEEEECTTCBHH-HHHHHHHHHTCTTCCCCCCCS-SSSSCCCEEEE-TTE-----------
T ss_pred EEEEEEcCCCCCCCCeeEEEEEecCCCChHH-HHHHHcCcccCCCcccccCCC-CCcCCCCEeEE-CCE-----------
Confidence 4555555654322345677899999999999 999999965222456667996 99999999996 464
Q ss_pred hccCCCCCCeEEeeeeEeeecCCCccEEEEeCC
Q 030671 137 RYLKKKPESWRLACQTIVGNKENSGKVVVQRIP 169 (173)
Q Consensus 137 ~~L~~~~~g~RLaCQ~~v~~~e~~gdv~V~~~p 169 (173)
.+|||++.+. +..+.++|+-++
T Consensus 73 ---------~~~aC~~~~~--~~~~~~~i~~l~ 94 (243)
T 1kf6_B 73 ---------PKLACKTFLR--DYTDGMKVEALA 94 (243)
T ss_dssp ---------EEEGGGCBGG--GCTTCEEEECCT
T ss_pred ---------EEeeeeeEHh--hCCCcEEEEecC
Confidence 4899999886 222337776544
No 28
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=98.67 E-value=4.3e-08 Score=83.54 Aligned_cols=91 Identities=22% Similarity=0.380 Sum_probs=66.4
Q ss_pred CcEEEEEEcCCC-CCCCCccEEEEEecC-CchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCCh
Q 030671 56 PEIELEFIAPRA-GDDGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTN 133 (173)
Q Consensus 56 ~~i~v~f~~~~~-~~d~~~~v~~v~v~~-G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~ 133 (173)
-+++|..++++. +....|+.+++.+.+ |++|| |+|.+.+..+..+++...+|+ .|.||.|.|.|. |.
T Consensus 36 ~~~~I~R~~p~~~~~~p~~~~~~v~v~~~~~tlL-daL~~i~~~~~ptl~~~~~C~-~G~CGsC~V~In-G~-------- 104 (282)
T 3vr8_B 36 KTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVL-DALIKIKNEVDPTLTFRRSCR-EGICGSCAMNIA-GE-------- 104 (282)
T ss_pred EEEEEEEeCCCCCCCCCCcEEEEEEeCCCCCcHH-HHHHhcCcccCCceeecCCCC-CCCCCCCEEEEC-CE--------
Confidence 356667777753 222455667888888 99999 999998876444567778998 799999999876 64
Q ss_pred HHHhccCCCCCCeEEeeeeEeeecCCCccEEEEeCCC
Q 030671 134 TELRYLKKKPESWRLACQTIVGNKENSGKVVVQRIPQ 170 (173)
Q Consensus 134 ~E~~~L~~~~~g~RLaCQ~~v~~~e~~gdv~V~~~p~ 170 (173)
.+|||.+.+. ...+..++|+-+|.
T Consensus 105 ------------~~laC~t~v~-~~~~~~~tIepL~~ 128 (282)
T 3vr8_B 105 ------------NTLACICNID-QNTSKTTKIYPLPH 128 (282)
T ss_pred ------------EecchhhhHh-HhcCCcEEeccCCC
Confidence 4789998886 33345678877764
No 29
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=98.65 E-value=3.9e-08 Score=81.46 Aligned_cols=89 Identities=20% Similarity=0.355 Sum_probs=62.6
Q ss_pred cEEEEEEcCCCCC-CCCccEEEEEecC-CchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChH
Q 030671 57 EIELEFIAPRAGD-DGSYPVERAKAIS-GEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNT 134 (173)
Q Consensus 57 ~i~v~f~~~~~~~-d~~~~v~~v~v~~-G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~ 134 (173)
+++|..++++.+. ...|+.+++.+.+ |+||| |+|.+.|+....++....+|+ .|.||+|.|.| +|.
T Consensus 13 ~~~i~R~~~~~~~~~~~~~~~~v~~~~~~~tlL-d~l~~~~~~~~p~l~~~~~c~-~g~Cg~C~v~i-~G~--------- 80 (252)
T 2h88_B 13 KFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVL-DALIKIKNELDSTLTFRRSCR-EGICGSCAMNI-AGG--------- 80 (252)
T ss_dssp EEEEEECCTTSTTSCCEEEEEEEEGGGSCSBHH-HHHHHHHHHTCTTCCCCCSCS-SSSSCTTEEEE-TTE---------
T ss_pred EEEEEEeCCCCCCCCceEEEEEEecCCCCChHH-HHHHHhCcccCCCccccCCCC-CCCCCCCEEEE-CCc---------
Confidence 3455555554322 1246667889988 99999 999998853222355566997 89999999996 464
Q ss_pred HHhccCCCCCCeEEeeeeEeeecCCCc-cEEEEeCCC
Q 030671 135 ELRYLKKKPESWRLACQTIVGNKENSG-KVVVQRIPQ 170 (173)
Q Consensus 135 E~~~L~~~~~g~RLaCQ~~v~~~e~~g-dv~V~~~p~ 170 (173)
.+|||++.+. +.+| .++|+-++.
T Consensus 81 -----------~~~aC~~~~~--~~~g~~~~iepl~~ 104 (252)
T 2h88_B 81 -----------NTLACTKKID--PDLSKTTKIYPLPH 104 (252)
T ss_dssp -----------EEEGGGSBCC--CCTTSCEEEECSTT
T ss_pred -----------EEccccCCHh--HcCCCceEEecccC
Confidence 5899999886 3334 588887763
No 30
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=98.50 E-value=1.2e-07 Score=74.85 Aligned_cols=56 Identities=21% Similarity=0.377 Sum_probs=45.3
Q ss_pred EEEEecCCchHHHHHHHHC-CCC-ccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeE
Q 030671 76 ERAKAISGEKLLRNIMLDN-KIE-LYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTI 153 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~-Gi~-l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~ 153 (173)
+++.+++|++|| ++|+++ |+. +++ .|+ .|.||+|.|.| +|. .++||++.
T Consensus 21 ~~~~v~~~~tlL-~~Lr~~~gl~g~~~------~C~-~G~CGaC~V~v-dG~--------------------~v~sC~~~ 71 (168)
T 1t3q_A 21 RVFYVEPRMHLA-DALREVVGLTGTKI------GCE-QGVCGSCTILI-DGA--------------------PMRSCLTL 71 (168)
T ss_dssp EEEEECTTSBHH-HHHHHTTCCTTSCC------SCS-SSSSCTTEEEE-TTE--------------------EEEGGGSB
T ss_pred EEEecCCCCcHH-HHHHhcCCCCcccc------CCC-CCCCCCcEEEE-CCC--------------------EeechhhH
Confidence 456789999999 999996 887 666 998 89999999999 564 47899998
Q ss_pred eeecCCCcc
Q 030671 154 VGNKENSGK 162 (173)
Q Consensus 154 v~~~e~~gd 162 (173)
+. +.+|.
T Consensus 72 ~~--~~~G~ 78 (168)
T 1t3q_A 72 AV--QAEGC 78 (168)
T ss_dssp GG--GGTTC
T ss_pred HH--HhCCC
Confidence 75 33454
No 31
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=98.26 E-value=9.5e-07 Score=83.70 Aligned_cols=74 Identities=20% Similarity=0.358 Sum_probs=52.1
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCCcCCC-----CCceeecCcEEEEecCcccCCCCChHHH-hccCCC-------C
Q 030671 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNC-----GGGGSCGTCIVEIIDGKDLLNERTNTEL-RYLKKK-------P 143 (173)
Q Consensus 77 ~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C-----~G~G~CGTC~V~V~~G~~~l~~~t~~E~-~~L~~~-------~ 143 (173)
++++++|+||| +|++++|+++|+ .| ++.|.|+.|.|+|..+.. +.+. .++++. .
T Consensus 10 ~~~v~~g~til-~a~~~~gi~ip~------~C~~~~~~~~G~C~~C~V~v~~~~~------~~~g~~~~~~~G~~~~~~~ 76 (783)
T 3i9v_3 10 IVEVPPGTSVM-DAVFHAGYDVPL------FCSEKHLSPIGACRMCLVRIGLPKK------GPDGKPLLNEKGEPEIQWQ 76 (783)
T ss_dssp EEEECTTCBHH-HHHHHTTCCCCC------SSCCTTSCCCCCSCCSEEEEECC-----------------------CCBC
T ss_pred EEEeCCCChHH-HHHHHhCCCccc------cCCCCCCCCCcccCCcEEEeccccc------ccccccccccccccccccC
Confidence 56899999999 999999999999 88 458999999999963221 1111 112111 2
Q ss_pred CCeEEeeeeEeeecCCCccEEEEeC
Q 030671 144 ESWRLACQTIVGNKENSGKVVVQRI 168 (173)
Q Consensus 144 ~g~RLaCQ~~v~~~e~~gdv~V~~~ 168 (173)
.+..+||++.+. ..++|...
T Consensus 77 ~~~~~aC~t~v~-----~gm~v~t~ 96 (783)
T 3i9v_3 77 PKLAASCVTAVA-----DGMVVDTL 96 (783)
T ss_dssp SSCEETTTCBCC-----SSEEEESS
T ss_pred CCcccccCCCCC-----CCCEEEEC
Confidence 368899999997 55777764
No 32
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=98.05 E-value=6e-06 Score=75.85 Aligned_cols=65 Identities=23% Similarity=0.445 Sum_probs=48.6
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCC-ceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGG-GGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G-~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+.+.+++|+||| +||+++|+.+|+ +-....|.+ .|.||.|.|+|. |. . .++||++.+
T Consensus 9 ~~v~v~~g~tiL-~a~~~~gi~ip~-lC~~~~~~~~~G~Cg~C~V~v~-g~------------------~-~~~aC~t~v 66 (574)
T 3c8y_A 9 VQFNTDEDTTIL-KFARDNNIDISA-LCFLNNCNNDINKCEICTVEVE-GT------------------G-LVTACDTLI 66 (574)
T ss_dssp EEEEECCCCBHH-HHHHHTTCCCCC-SSCBTTBCCSSSCCCTTEEEET-TT------------------E-EEEGGGCBC
T ss_pred EEEEeCCCCHHH-HHHHHcCCCCCc-ccCCCCCCCCcccCCCCEEEeC-CC------------------c-ccccCCCCc
Confidence 466899999999 999999999997 111123336 899999999984 43 1 589999988
Q ss_pred eecCCCccEEEEe
Q 030671 155 GNKENSGKVVVQR 167 (173)
Q Consensus 155 ~~~e~~gdv~V~~ 167 (173)
. ..++|..
T Consensus 67 ~-----~gm~V~T 74 (574)
T 3c8y_A 67 E-----DGMIINT 74 (574)
T ss_dssp C-----TTCEEES
T ss_pred c-----cceeEEe
Confidence 7 4456654
No 33
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=97.93 E-value=1e-05 Score=63.57 Aligned_cols=52 Identities=29% Similarity=0.585 Sum_probs=41.3
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+++.+.+|++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .++||++.+
T Consensus 14 ~~v~~~~~~tLL-~~Lr~~~gl~-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~sC~~~~ 65 (161)
T 1rm6_C 14 REDLVPDNMLLL-DYLRETVGLT-----GTKQGCD-GGECGACTVLVD-DR--------------------PRLACSTLA 65 (161)
T ss_dssp EEEEEETTCBHH-HHHHHTTCCT-----TSCCCSS-SSSSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCcCcHH-HHHHHcCCCc-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EEechHHHH
Confidence 456788999999 999987 442 3445998 899999999994 54 488999987
Q ss_pred e
Q 030671 155 G 155 (173)
Q Consensus 155 ~ 155 (173)
.
T Consensus 66 ~ 66 (161)
T 1rm6_C 66 H 66 (161)
T ss_dssp G
T ss_pred H
Confidence 5
No 34
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=97.71 E-value=3e-05 Score=61.32 Aligned_cols=52 Identities=19% Similarity=0.448 Sum_probs=40.5
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+++.++++++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .++||.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lgl~-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~SC~~~~ 66 (166)
T 1n62_A 15 VEALVEPRTLLI-HFIREQQNLT-----GAHIGCD-TSHCGACTVDLD-GM--------------------SVKSCTMFA 66 (166)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHHcCCCC-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EEechhhhH
Confidence 466889999999 999885 432 3345898 899999999995 54 478898877
Q ss_pred e
Q 030671 155 G 155 (173)
Q Consensus 155 ~ 155 (173)
.
T Consensus 67 ~ 67 (166)
T 1n62_A 67 V 67 (166)
T ss_dssp G
T ss_pred H
Confidence 4
No 35
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=97.68 E-value=3.1e-05 Score=61.05 Aligned_cols=52 Identities=19% Similarity=0.509 Sum_probs=40.5
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+++.++++++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .++||.+.+
T Consensus 15 ~~~~v~~~~tLL-d~LR~~lglt-----g~k~gC~-~G~CGaCtV~vd-G~--------------------~v~sC~~~~ 66 (163)
T 1ffv_A 15 QEKAVEPRTLLI-HFLREELNLT-----GAHIGCE-TSHCGACTVDID-GR--------------------SVKSCTHLA 66 (163)
T ss_dssp EEEEECTTCBHH-HHHHHTSCCT-----TSCCCCS-SSCSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCcHH-HHHHhcCCCc-----ccccCCC-CCCCCCCEEEEC-Cc--------------------EecchHhhH
Confidence 466889999999 999884 432 3345998 899999999985 54 478888877
Q ss_pred e
Q 030671 155 G 155 (173)
Q Consensus 155 ~ 155 (173)
.
T Consensus 67 ~ 67 (163)
T 1ffv_A 67 V 67 (163)
T ss_dssp G
T ss_pred H
Confidence 5
No 36
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=97.47 E-value=9.8e-05 Score=58.13 Aligned_cols=52 Identities=21% Similarity=0.511 Sum_probs=40.2
Q ss_pred EEEEecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+++.+.++++|| ++|++. |+. +....|+ .|.||.|.|.|. |. .+++|.+.+
T Consensus 15 ~~v~v~p~~tLL-d~LR~~lglt-----gtk~gC~-~G~CGACtV~vd-G~--------------------~v~sC~~~~ 66 (160)
T 3hrd_D 15 RSIVTEPNKRLL-DLLREDFGLT-----SVKEGCS-EGECGACTVIFN-GD--------------------PVTTCCMLA 66 (160)
T ss_dssp EEEEECSSSBHH-HHHHTTSCCT-----TSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGSBG
T ss_pred EEEecCCCCCHH-HHHHHhcCCC-----ccccccC-CCCCCCCEEEEC-CE--------------------EEEchhhhh
Confidence 467899999999 999875 542 2345898 899999999985 53 477888766
Q ss_pred e
Q 030671 155 G 155 (173)
Q Consensus 155 ~ 155 (173)
.
T Consensus 67 ~ 67 (160)
T 3hrd_D 67 G 67 (160)
T ss_dssp G
T ss_pred h
Confidence 4
No 37
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=96.21 E-value=0.0023 Score=57.57 Aligned_cols=56 Identities=25% Similarity=0.449 Sum_probs=40.8
Q ss_pred EEE-EecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEe
Q 030671 76 ERA-KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIV 154 (173)
Q Consensus 76 ~~v-~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v 154 (173)
+++ .+.++++|| ++|++.|+. +....|+ .|.||.|.|.|.+-.+ ...+++|.+.+
T Consensus 12 ~~~~~~~~~~~Ll-~~Lr~~~l~-----g~k~gC~-~G~CGaCtV~v~~~~~-----------------g~~v~sCl~~~ 67 (462)
T 2w3s_A 12 RRVRIEDPTQSLL-EWLRAEGLT-----GTKEGCN-EGDCGACTVMIRDAAG-----------------SRAVNACLMML 67 (462)
T ss_dssp EEEECSCTTCBHH-HHHHHTTCT-----TSCCSCS-SSSSCTTEEEEEETTE-----------------EEEEETTTCBG
T ss_pred EEEecCCCCCcHH-HHHHHcCCC-----ccCCCCC-CCCcCCcEEEEEecCC-----------------CeEEEchhhhH
Confidence 455 678999999 999955553 4556998 8999999999943111 01588888877
Q ss_pred e
Q 030671 155 G 155 (173)
Q Consensus 155 ~ 155 (173)
.
T Consensus 68 ~ 68 (462)
T 2w3s_A 68 P 68 (462)
T ss_dssp G
T ss_pred H
Confidence 5
No 38
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=96.18 E-value=0.003 Score=61.11 Aligned_cols=53 Identities=26% Similarity=0.451 Sum_probs=41.2
Q ss_pred EEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEee
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v~ 155 (173)
+++.+.++++|| ++|++. ..+ .+....|+ .|.||.|.|.|. |. .+++|.+.+.
T Consensus 13 ~~~~~~~~~~ll-~~Lr~~-~~l---~g~k~gC~-~g~CGaCtv~vd-g~--------------------~~~sC~~~~~ 65 (907)
T 1vlb_A 13 QNLFVDAEALLS-DVLRQQ-LGL---TGVKVGCE-QGQCGACSVILD-GK--------------------VVRACVTKMK 65 (907)
T ss_dssp EEEEECTTSBHH-HHHHHT-TCC---TTSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGCBGG
T ss_pred EEEecCCCChHH-HHHHHh-cCC---CeecCCCC-CCCcCccEEEEC-Ce--------------------EeechHhHHH
Confidence 467899999999 999985 221 24556998 899999999984 54 5888988775
No 39
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=95.96 E-value=0.0046 Score=59.74 Aligned_cols=52 Identities=27% Similarity=0.558 Sum_probs=40.7
Q ss_pred EEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcccCCCCChHHHhccCCCCCCeEEeeeeEee
Q 030671 77 RAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKDLLNERTNTELRYLKKKPESWRLACQTIVG 155 (173)
Q Consensus 77 ~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~~l~~~t~~E~~~L~~~~~g~RLaCQ~~v~ 155 (173)
++.+.++++|| ++|++. +.+ .+....|+ .|.||.|.|.|. |. .+++|.+.+.
T Consensus 14 ~~~~~~~~~ll-~~Lr~~-~~l---~g~k~gC~-~G~CGaCtv~vd-g~--------------------~v~sC~~~~~ 65 (907)
T 1dgj_A 14 RLLVSPNDLLV-DVLRSQ-LQL---TSVKVGCG-KGQCGACTVILD-GK--------------------VVRACIIKMS 65 (907)
T ss_dssp EEEECTTCBHH-HHHHHT-TCC---TTSCCSSS-SSSSCTTEEEET-TE--------------------EEEGGGCBGG
T ss_pred EEecCCCCcHH-HHHHHh-cCC---CccCCCCC-CCCcCceEEEEC-Ce--------------------EeehhHhHHH
Confidence 56889999999 999985 222 24567998 899999999984 54 5788888775
No 40
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=95.64 E-value=0.0085 Score=47.27 Aligned_cols=39 Identities=28% Similarity=0.630 Sum_probs=31.2
Q ss_pred EEEecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEe
Q 030671 77 RAKAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEII 122 (173)
Q Consensus 77 ~v~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (173)
.+.++++++|| ++|++. |+. |....|+ .|.||.|-|.|.
T Consensus 16 ~~~~~p~~~Ll-~~LR~~lglt-----GtK~GC~-~G~CGACTVlvd 55 (164)
T 3nvw_A 16 EKNADPETTLL-AYLRRKLGLR-----GTKLGCG-EGGCGACTVMLS 55 (164)
T ss_dssp ETTCCTTCBHH-HHHHHTSCCT-----TSCCSCS-SSSSCTTEEEEE
T ss_pred EecCCCCCCHH-HHHHHHcCCC-----CcCCCcC-CCCCCCCEEEEc
Confidence 34688999999 999875 542 3445998 899999999997
No 41
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.31 E-value=0.043 Score=48.50 Aligned_cols=54 Identities=20% Similarity=0.222 Sum_probs=35.3
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEe
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (173)
..++|+|.+ +.+.+.+|+||+ +||+++|+++-. +...+.-.|.-.|+.|.|.|.
T Consensus 14 ~~v~~~~dg-----------~~~~~~~g~ti~-~a~~~~g~~~~~-~~~~~~p~g~~~~~~c~v~v~ 67 (493)
T 1y56_A 14 KKVTIYFEG-----------KELEAYEGEKLP-VALLANEIYWLT-TSNEGRKRGAFTFGPVPMTVN 67 (493)
T ss_dssp CEEEEEETT-----------EEEEEETTCBHH-HHHHHTTCCCCE-ECTTSCEECSSSSSCCEEBSS
T ss_pred CeEEEEECC-----------EEEEecCCCHHH-HHHHHCCCceec-CCCCCCCCccccceEEEEEEC
Confidence 457877743 456899999999 999999997532 111111112233788999875
No 42
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=88.42 E-value=0.88 Score=43.79 Aligned_cols=54 Identities=13% Similarity=0.231 Sum_probs=40.4
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccc-c--CCCc--CCCCCceeecCcEEEEe
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA-T--YGKV--MNCGGGGSCGTCIVEII 122 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~-~--~~~~--~~C~G~G~CGTC~V~V~ 122 (173)
.+|+|+|.+ +.+.+.+|+||+ +||+.+|+.+.. + |+.. .-|. .|.|..|.|.|.
T Consensus 21 ~~~~~~~dG-----------~~~~~~~g~tv~-~aL~~~Gv~~~~~s~~~~~prg~~~~-~~~c~~~~v~v~ 79 (965)
T 2gag_A 21 EALSLTVDG-----------AKLSAFRGDTVA-SALLANGVRRAGNSLYLDRPRGIFAA-GVEEPNALVTVS 79 (965)
T ss_dssp EEEEEEETT-----------EEEEEEETCBHH-HHHHHTTCCBCSCCTTTCCCCBCCCS-STTCCSCEEEEC
T ss_pred CeEEEEECC-----------EEEEecCCCHHH-HHHHHcCCeEeecCCCCCCCcccccC-CccCCceEEEEc
Confidence 457777643 456888999999 999999998654 2 2322 4576 588999999998
No 43
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=85.45 E-value=0.46 Score=38.15 Aligned_cols=32 Identities=28% Similarity=0.528 Sum_probs=27.4
Q ss_pred HHHHHCCCCccccCCCcCCCCCceeecCcEEEEe
Q 030671 89 NIMLDNKIELYATYGKVMNCGGGGSCGTCIVEII 122 (173)
Q Consensus 89 dal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (173)
+ |.+.|++..-++...+.|+ -|.||.|.|...
T Consensus 208 ~-l~~~gv~~~vs~e~~m~CG-~G~C~~C~~~~~ 239 (262)
T 1ep3_B 208 K-KYDQLERLYISMESRMACG-IGACYACVEHDK 239 (262)
T ss_dssp H-HTTTCSSEEEECCCCCSSS-SSSSCTTEEEET
T ss_pred H-HHhCCCCEEEEecccccCc-ccccccCCcccc
Confidence 5 7778998777888889998 899999999864
No 44
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=84.65 E-value=0.91 Score=45.70 Aligned_cols=37 Identities=30% Similarity=0.664 Sum_probs=29.6
Q ss_pred EecCCchHHHHHHHHC-CCCccccCCCcCCCCCceeecCcEEEEe
Q 030671 79 KAISGEKLLRNIMLDN-KIELYATYGKVMNCGGGGSCGTCIVEII 122 (173)
Q Consensus 79 ~v~~G~tLLrdal~~~-Gi~l~~~~~~~~~C~G~G~CGTC~V~V~ 122 (173)
.+.++++|| +.|++. |+. |.-..|+ .|.||.|-|.|.
T Consensus 19 ~~~p~~~ll-~~LR~~~~lt-----gtk~gC~-~g~CGaCtV~~~ 56 (1332)
T 3unc_A 19 NADPETTLL-AYLRRKLGLR-----GTKLGCG-EGGCGACTVMLS 56 (1332)
T ss_dssp TCCTTCBHH-HHHHHTSCCT-----TSCCSCS-SSSSCTTEEEEE
T ss_pred cCCCCCCHH-HHHhhhcCCC-----CcCCCcC-CCCCCCcEEEEe
Confidence 578999999 999874 443 2335898 899999999995
No 45
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=75.49 E-value=3.7 Score=36.99 Aligned_cols=53 Identities=9% Similarity=0.066 Sum_probs=35.7
Q ss_pred EEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEecCcc
Q 030671 58 IELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIIDGKD 126 (173)
Q Consensus 58 i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~G~~ 126 (173)
++|.++++..+....|+.++|.+.+++||| |+|.... . ++|+ . +|.+.|- |..
T Consensus 27 ~~i~R~~p~~~~~p~~~~y~v~~~~~~~vL-d~L~~ik-~--------l~fr-~----sCam~IN-G~~ 79 (514)
T 3kwl_A 27 VKVFRFETNKDYNPAYESYFLEYQEDQYLL-DLLKQLK-G--------VSYS-E----NIALKIN-QIA 79 (514)
T ss_dssp EEEEECBTTSCSCCEEEEEEEECCTTCBHH-HHHTTST-T--------CCCC-S----SCCEEET-TEE
T ss_pred EEEEEeCCCCCCCCceEEEEEeCCCCCcHH-HHHHHhh-h--------Ceee-c----cceEEEC-CEe
Confidence 555556665432345566678899999999 9998877 2 2566 3 6777775 664
No 46
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=72.78 E-value=5.7 Score=28.59 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=28.8
Q ss_pred CCcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCCCccc
Q 030671 55 KPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKIELYA 100 (173)
Q Consensus 55 ~~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi~l~~ 100 (173)
..+|+|++.++ ++.-....|. +.|++|+ ++|.++. .+..
T Consensus 6 ~k~i~i~v~~~----~~~~~~~~v~-t~g~tL~-dvLk~~~-~ve~ 44 (101)
T 3u7z_A 6 EKHITVTVIHG----DQTENVFEFD-TDAKYLG-EVLESEN-LVDG 44 (101)
T ss_dssp CEEEEEEEECT----TSCEEEEEEE-ECCSBHH-HHHHHTT-CEEE
T ss_pred eeEEEEEEEcC----CCceeEEEEc-CCccHHH-HHHHHcC-cccc
Confidence 35789999864 3444445778 9999999 9999998 3443
No 47
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=62.75 E-value=5.7 Score=39.92 Aligned_cols=39 Identities=36% Similarity=0.610 Sum_probs=29.1
Q ss_pred EecCCchHHHHHHHHCCCCccccCCCcCCCCCceeecCcEEEEec
Q 030671 79 KAISGEKLLRNIMLDNKIELYATYGKVMNCGGGGSCGTCIVEIID 123 (173)
Q Consensus 79 ~v~~G~tLLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~V~V~~ 123 (173)
.+.+..||| +-|+.. ..+.+ --..|+ .|-||.|-|-|..
T Consensus 23 ~~~p~~tLl-~~LR~~-~~ltG---TK~gC~-EG~CGACtV~v~~ 61 (1335)
T 3zyv_A 23 NADPEVNLL-FYLRKV-IRLTG---TKYGCG-GGDCGACTVMISR 61 (1335)
T ss_dssp SCCTTCBHH-HHHHHT-TCCTT---SCCSCS-SSSSCTTEEEEEE
T ss_pred CCCcCccHH-HHHhcc-CCCcc---cccccC-CCCCcceEEEEee
Confidence 467899999 988874 33332 234898 8999999999863
No 48
>3kdv_A DDRB, DNA damage response B protein; anti-parallel beta-barrel, pentamer, DNA binding protein; HET: DNA; 2.80A {Deinococcus geothermalis} PDB: 4exw_A
Probab=35.94 E-value=32 Score=27.01 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=27.7
Q ss_pred CCCCcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCC
Q 030671 53 PEKPEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKI 96 (173)
Q Consensus 53 ~~~~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi 96 (173)
+|-.+++|+|..+-+ .. .+++++.++.|| +.++..|-
T Consensus 3 ~~~tml~i~f~t~LG---~~---V~vdve~~~~~l-~v~R~yG~ 39 (184)
T 3kdv_A 3 DPFTMLHIEFITDLG---AK---VTVDVESADKLL-DVQRQYGR 39 (184)
T ss_dssp CCSCCEEEEEECTTC---CE---EEEEESSGGGHH-HHHHHHHT
T ss_pred CccceEEEEEecCCC---ce---EEEecCCHHHHH-HHHHHhhh
Confidence 456789999997532 11 467899999999 99987653
No 49
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=32.65 E-value=70 Score=28.23 Aligned_cols=37 Identities=11% Similarity=0.050 Sum_probs=24.3
Q ss_pred CcEEEEEEcCCCCCCCCccEEEEEecCCchHHHHHHHHCCC
Q 030671 56 PEIELEFIAPRAGDDGSYPVERAKAISGEKLLRNIMLDNKI 96 (173)
Q Consensus 56 ~~i~v~f~~~~~~~d~~~~v~~v~v~~G~tLLrdal~~~Gi 96 (173)
..|+|++.-.. ..+...+.|.++.|.++| ++|..+--
T Consensus 315 ~~I~VtytV~~---~~~~~~~~Vtv~~gssll-~vLk~A~e 351 (414)
T 2bb6_A 315 KFIDVLLKVSG---ISPSYRHSVSVPAGSSLE-DILKNAQE 351 (414)
T ss_dssp CEEEEEEEEES---SSSCEEEEEEEETTCCHH-HHHHHHHH
T ss_pred ceEEEEEEEee---CCCccceEEEecCCCCHH-HHHHHHHh
Confidence 55666554331 223334679999999999 99877643
No 50
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=30.42 E-value=51 Score=21.75 Aligned_cols=23 Identities=0% Similarity=-0.052 Sum_probs=19.5
Q ss_pred EEEEecCCchHHHHHHHHCCCCcc
Q 030671 76 ERAKAISGEKLLRNIMLDNKIELY 99 (173)
Q Consensus 76 ~~v~v~~G~tLLrdal~~~Gi~l~ 99 (173)
.++++++|.|+. |.|.+.|++..
T Consensus 13 ~~~ev~~g~Tv~-dLL~~Lgl~~~ 35 (74)
T 2l32_A 13 SEVAVDDDGTYA-DLVRAVDLSPH 35 (74)
T ss_dssp EEEECSTTCSHH-HHHHTTCCCSS
T ss_pred eeEEcCCCCcHH-HHHHHcCCCcc
Confidence 456899999987 99999999854
No 51
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=28.64 E-value=22 Score=23.90 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=16.9
Q ss_pred HHHHHHHHCCCCccccCCCcCCCCCceeecCcE
Q 030671 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTCI 118 (173)
Q Consensus 86 LLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC~ 118 (173)
-| +.|.+.|.-.... .....|. .|.|+.|.
T Consensus 36 dL-~~Le~~G~l~R~~-~~GgaC~-~g~C~~C~ 65 (78)
T 1xn7_A 36 ML-QQLESMGKAVRIQ-EEPDGCL-SGSCKSCP 65 (78)
T ss_dssp HH-HHHHHHTSEEEEC-CCCCCCC-CSSCCCCC
T ss_pred HH-HHHHHCCCEEEec-CcCCCCC-CCCCCCCC
Confidence 35 6778888642210 0012787 46799883
No 52
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=22.21 E-value=48 Score=22.84 Aligned_cols=29 Identities=24% Similarity=0.418 Sum_probs=17.1
Q ss_pred HHHHHHHHCCCCccccCCCcCCCCCceeecCc
Q 030671 86 LLRNIMLDNKIELYATYGKVMNCGGGGSCGTC 117 (173)
Q Consensus 86 LLrdal~~~Gi~l~~~~~~~~~C~G~G~CGTC 117 (173)
.| +.|.+.|.-.... .....|. .|.|+.|
T Consensus 36 DL-~~Le~~G~l~R~~-~~~~~C~-sgsC~sC 64 (87)
T 2k02_A 36 ML-ERMEAMGKVVRIS-ETSEGCL-SGSCKSC 64 (87)
T ss_dssp HH-HHHHTTCCSEEEE-EECCSSC-SSSSSSC
T ss_pred HH-HHHHHCCCEEEEe-cCCCCCC-CCCCCCC
Confidence 45 7788888743320 0112786 4679988
Done!