BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030675
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7TP48|APMAP_RAT Adipocyte plasma membrane-associated protein OS=Rattus norvegicus
GN=Apmap PE=2 SV=2
Length = 376
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 98/190 (51%), Gaps = 27/190 (14%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKE-- 60
+L E +N PE + V+ VL+T T DG + ++ NG E + GS G T++
Sbjct: 53 RLFENQLNGPESI-VNIGDVLFTGTADGRVVKLE-NGEIETIARFGS----GPCKTRDDE 106
Query: 61 -------------NNVIIVCDSQQGLLKVS--EEGVTVLVSQ---FNGSQLRFANDVIEA 102
N + V D+ +GL +V+ + V +L+S G ++ F ND+
Sbjct: 107 PTCGRPLGIRVGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTIT 166
Query: 103 SDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161
DG +YFT SS+K+ +Y L ++ G G LL+YD T + ++LD L F NGV LS
Sbjct: 167 RDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSP 226
Query: 162 DERFLVVCES 171
+E F++V E+
Sbjct: 227 EEDFVLVAET 236
>sp|Q9D7N9|APMAP_MOUSE Adipocyte plasma membrane-associated protein OS=Mus musculus
GN=Apmap PE=1 SV=1
Length = 415
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 27/190 (14%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKE-- 60
+L E ++ PE + V+ VL+T T DG + ++ NG E + GS G T++
Sbjct: 92 RLFENQLSGPESI-VNIGDVLFTGTADGRVVKLE-NGEIETIARFGS----GPCKTRDDE 145
Query: 61 -------------NNVIIVCDSQQGLLKVS--EEGVTVLVSQ---FNGSQLRFANDVIEA 102
N + V D+ +GL +V+ + V +L+S G ++ F ND+
Sbjct: 146 PTCGRPLGIRAGPNGTLFVVDAYKGLFEVNPQKRSVKLLLSSETPIEGKKMSFVNDLTVT 205
Query: 103 SDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161
DG +YFT SS+K+ +Y L ++ G LL+YD T + ++LD L F NGV LS
Sbjct: 206 RDGRKIYFTDSSSKWQRRDYLLLVMEATDDGRLLEYDTVTKEVKVLLDQLQFPNGVQLSP 265
Query: 162 DERFLVVCES 171
+E F++V E+
Sbjct: 266 EEDFVLVAET 275
>sp|Q3T0E5|APMAP_BOVIN Adipocyte plasma membrane-associated protein OS=Bos taurus GN=APMAP
PE=2 SV=1
Length = 412
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 27/189 (14%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKE-- 60
+L E + PE ++ G+ V++T T DG + ++ NG E + GS G T++
Sbjct: 92 RLFENQLVGPESIANIGD-VMFTGTADGRVVKLE-NGEVETIARFGS----GPCKTRDDE 145
Query: 61 -------------NNVIIVCDSQQGLLKVS--EEGVTVLVSQ---FNGSQLRFANDVIEA 102
N + V D+ +GL +V+ + V +L+S G ++ F ND+
Sbjct: 146 PACGRPLGIRAGPNGTLFVVDAYKGLFEVNPWKREVKLLLSSETPIEGRKMSFLNDLTVT 205
Query: 103 SDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161
DG +YFT SS+K+ +Y L L+ G G LL+YD T + ++LD L F NGV LS
Sbjct: 206 RDGRKIYFTDSSSKWQRRDYLLLLMEGTDDGRLLEYDTQTKEVKVLLDHLRFPNGVQLSP 265
Query: 162 DERFLVVCE 170
E F++V E
Sbjct: 266 AEDFVLVVE 274
>sp|Q9HDC9|APMAP_HUMAN Adipocyte plasma membrane-associated protein OS=Homo sapiens
GN=APMAP PE=1 SV=2
Length = 416
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 27/190 (14%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKE-- 60
+L E + PE ++ G+ V++T T DG + ++ NG E + GS G T++
Sbjct: 93 RLFENQLVGPESIAHIGD-VMFTGTADGRVVKLE-NGEIETIARFGS----GPCKTRDDE 146
Query: 61 -------------NNVIIVCDSQQGLLKVS--EEGVTVLVSQ---FNGSQLRFANDVIEA 102
N + V D+ +GL +V+ + V +L+S G + F ND+
Sbjct: 147 PVCGRPLGIRAGPNGTLFVADAYKGLFEVNPWKREVKLLLSSETPIEGKNMSFVNDLTVT 206
Query: 103 SDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161
DG +YFT SS+K+ +Y L ++ G G LL+YD T + ++LD L F NGV LS
Sbjct: 207 QDGRKIYFTDSSSKWQRRDYLLLVMEGTDDGRLLEYDTVTREVKVLLDQLRFPNGVQLSP 266
Query: 162 DERFLVVCES 171
E F++V E+
Sbjct: 267 AEDFVLVAET 276
>sp|Q5ZIF1|APMAP_CHICK Adipocyte plasma membrane-associated protein OS=Gallus gallus
GN=APMAP PE=2 SV=1
Length = 415
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMH-------------PNGTWEDWHQVGS 49
+L E + PE + V+ VL+T T DG I ++ P GT ED G
Sbjct: 92 RLWENQLVGPESI-VNIGDVLFTGTADGKILKIEDGEVQTVARIGHGPCGTPEDEPTCGR 150
Query: 50 QSLLGLTTTKENNVIIVCDSQQGLLKVSE-EGVT-VLVSQ---FNGSQLRFANDVIEASD 104
LG+ NN + V D+ GL +V+ G T +LVS G +L F ND+ D
Sbjct: 151 P--LGIRVGP-NNTLFVADAYYGLYEVNPGTGETKMLVSTKTLIEGQKLSFLNDLTVTQD 207
Query: 105 G-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDE 163
G +YFT SS+K+ ++ ++ G G LL+YD T + +++ GL F NGV LS E
Sbjct: 208 GRKIYFTDSSSKWQRRDFLFLVMEGTDDGRLLEYDTVTKEVKVLMVGLRFPNGVQLSPAE 267
Query: 164 RFLVVCES 171
F++V E+
Sbjct: 268 DFVLVLET 275
>sp|Q803F5|APMAP_DANRE Adipocyte plasma membrane-associated protein OS=Danio rerio
GN=apmap PE=2 SV=1
Length = 415
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 12 PEDVSVDGNGVLYTATGDGWIKRMH-------------PNGTWEDWHQVGSQSLLGLTTT 58
PE ++ G+ V YT T DG I ++ P G+ E H G LG+
Sbjct: 101 PESLANIGD-VFYTGTADGKIVKIEGRNIHVLATIGKPPCGSREHEHTCGRP--LGIRVG 157
Query: 59 KENNVIIVCDSQQGLLKVSEEG--VTVLVS---QFNGSQLRFANDVIEASDGS-LYFTVS 112
N + V D+ GL +V+ V LVS + G +L F ND+ DG +YFT S
Sbjct: 158 P-NGTLFVADAYLGLFEVNPVTGEVKSLVSTEKRIAGRRLGFVNDLDVTQDGKKVYFTDS 216
Query: 113 STKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171
S+++ ++ ++ G +L+YD T + +++++ L F NG+ L DE ++V E+
Sbjct: 217 SSRWQRRDFMHLIMEATADGRVLEYDTETKEVNVMMENLRFPNGIQLFPDEESVLVAET 275
>sp|B5X3B2|APMAP_SALSA Adipocyte plasma membrane-associated protein OS=Salmo salar
GN=apmap PE=2 SV=1
Length = 416
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 24/189 (12%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMH--------------PNGTWEDWHQVG 48
+L E + PE ++ G+ ++YT T DG I ++ +G+ E G
Sbjct: 92 RLFEDQLVGPESIANFGD-LIYTGTADGKIVKIEGKSITVIARLGKPPCDGSREQEPSCG 150
Query: 49 SQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVLVS---QFNGSQLRFANDVIEAS 103
LG+ N + V D+ GL KV+ VT LVS G +L F ND+
Sbjct: 151 RP--LGIRVGP-NGTLFVADAYLGLFKVNPVTGEVTNLVSAGQMVGGRRLSFVNDLDVTQ 207
Query: 104 DG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSED 162
DG +YFT SS+++ +Y ++ G +L+YD T + +++++ L FANG+ L D
Sbjct: 208 DGRKVYFTDSSSRWQRRDYLHLIMEATADGRVLEYDTETKEVTVLMENLRFANGIQLFPD 267
Query: 163 ERFLVVCES 171
E ++V E+
Sbjct: 268 EESVLVAET 276
>sp|P94111|STS1_ARATH Strictosidine synthase 1 OS=Arabidopsis thaliana GN=SS1 PE=2 SV=2
Length = 335
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 12 PEDVSVDGNGV-LYTATGDGWIKRMHPNGTWEDWHQVGSQS------------------- 51
PE + D G YT G I + P + D+ Q+ S
Sbjct: 39 PEAFAFDSTGKGFYTGVSGGKILKYLPETGYVDFAQITESSNSSWCDGTIGTALAGRCGR 98
Query: 52 LLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVLVSQFNGSQLRFANDV-IEASDGSLY 108
G+ ++ + V D+ GL +S G T + +G +F + + ++ + G +Y
Sbjct: 99 PAGIAFNEKTGDLYVADAPLGLHVISPAGGLATKITDSVDGKPFKFLDGLDVDPTTGVVY 158
Query: 109 FTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVV 168
FT S++F+P + + L + G L KYDPST +++++GL + G A+S D F++V
Sbjct: 159 FTSFSSRFSPIQVLIALGLKDATGKLYKYDPSTKVVTVLMEGLSGSAGCAVSSDGSFVLV 218
Query: 169 CESWK 173
+ K
Sbjct: 219 SQFTK 223
>sp|P68174|STSY_RAUMA Strictosidine synthase (Fragment) OS=Rauvolfia mannii GN=STR1 PE=3
SV=1
Length = 342
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 18 DGNGVLYTATGDGWIKRMHPNGTW-----EDWHQVGSQSLLGLTT----TKENNVIIVCD 68
DG + Y G++ + + W E+ + L G T +NN + + D
Sbjct: 59 DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 118
Query: 69 SQQGLLKVSEEG--VTVLVSQFNGSQLRFANDV-IEASDGSLYFTVSSTKFTPAEYYLDL 125
L V EG T L + +G ++ V ++ G +YFT ST + +
Sbjct: 119 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 178
Query: 126 VSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170
+ + G L+KYDPST +T+L+L L+ G +S D F++V E
Sbjct: 179 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAE 223
>sp|P68175|STSY_RAUSE Strictosidine synthase OS=Rauvolfia serpentina GN=STR1 PE=1 SV=1
Length = 344
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 18 DGNGVLYTATGDGWIKRMHPNGTW-----EDWHQVGSQSLLG----LTTTKENNVIIVCD 68
DG + Y G++ + + W E+ + L G ++ +NN + + D
Sbjct: 61 DGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 120
Query: 69 SQQGLLKVSEEG--VTVLVSQFNGSQLRFANDV-IEASDGSLYFTVSSTKFTPAEYYLDL 125
L V EG T L + +G ++ V ++ G +YFT ST + +
Sbjct: 121 CYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 180
Query: 126 VSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170
+ + G L+KYDPST +T+L+L L+ G +S D F++V E
Sbjct: 181 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAE 225
>sp|P92976|STS3_ARATH Strictosidine synthase 3 OS=Arabidopsis thaliana GN=SS3 PE=2 SV=2
Length = 329
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 12 PEDVSVDGNGV-LYTATGDGWIKRMHPNGTWEDWHQVGSQS-------LLGLTTTKE--N 61
PE + D G YT G I + P + D+ Q+ + S LG T ++
Sbjct: 41 PEAFAFDSTGKGFYTGVTGGKILKYLPKKGYVDFAQITNSSKSSLCDGALGTTNVEKCGR 100
Query: 62 NVIIVCDSQQGLLKVSEEGVTV-LVSQFNGSQLRFANDV------------IEASDGSLY 108
I +++ G L V++ + + ++ + G + A+ V ++ + G +Y
Sbjct: 101 PAGIAFNTKTGDLYVADAALGLHVIPRRGGLAKKIADSVGGKPFLFLDGLDVDPTTGVVY 160
Query: 109 FTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVV 168
FT S+ F P + + + + G KYDPS +++++GL + G A+S D F++V
Sbjct: 161 FTSFSSTFGPRDVLKAVATKDSTGKFFKYDPSKKVVTVLMEGLSGSAGCAVSSDGSFVLV 220
Query: 169 CESWK 173
+ K
Sbjct: 221 GQFTK 225
>sp|P18417|STSY_CATRO Strictosidine synthase OS=Catharanthus roseus GN=STR1 PE=1 SV=2
Length = 352
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 5/116 (4%)
Query: 60 ENNVIIVCDSQQGLLKVSEEG--VTVLVSQFNGSQLRFANDV-IEASDGSLYFT-VSSTK 115
+N+ + + D L V +EG T L + G ++ V ++ G +YFT VSS
Sbjct: 116 KNSQMYIVDGHYHLCVVGKEGGYATQLATSVQGVPFKWLYAVTVDQRTGIVYFTDVSSIH 175
Query: 116 FTPAEYYLDLV-SGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170
E +++ + + G L+KYDPST +T+L+L L+ G +S D F+VV E
Sbjct: 176 DDSPEGVEEIMNTSDRTGRLMKYDPSTKETTLLLKELHVPGGAEISADGSFVVVAE 231
>sp|A2BYS2|RL6_PROM5 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9515) GN=rplF PE=3 SV=1
Length = 179
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 1 MIKLGEGIVNHPEDVSVDGNGVLYTATG-DGWIKRMHPNGTWEDWHQVGSQSLLGLTTTK 59
M ++G+ V P+ VSVD NG+ T G G +KR+ P G D+ Q +Q ++ +TTK
Sbjct: 1 MSRIGKSPVQIPDKVSVDINGLTITVKGPKGELKRLMPEGV--DFVQKENQIVVTPSTTK 58
Query: 60 E 60
Sbjct: 59 R 59
>sp|Q7SIG4|DFPA_LOLVU Diisopropyl-fluorophosphatase OS=Loligo vulgaris PE=1 SV=1
Length = 314
Score = 34.7 bits (78), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 54 GLTTTKENNVIIVCDSQQGLLKVSEEGVTVLVSQFN--GSQLRFANDVIEASDGSLYFTV 111
G ++ N + V D + GLL V +G +++ + G +++ ND +G+L+ T
Sbjct: 75 GCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITA 134
Query: 112 SSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALS 160
+ + PA+Y + E G + + + Q V F NG+A+
Sbjct: 135 PAGEVAPADYTRSMQ--EKFGSIYCFT-TDGQMIQVDTAFQFPNGIAVR 180
>sp|Q8CQ97|DRP35_STAES Lactonase drp35 OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=drp35 PE=3 SV=1
Length = 325
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 72 GLLKVSEEGVTV--LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGE 129
G+ +E+G + ++S N +D++ S G YFT S +
Sbjct: 111 GIFATTEKGEQIEEIISDLNTEYC--IDDMVFDSKGGFYFTD-----------FRGYSTQ 157
Query: 130 PHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171
P G + DP + ++ + ANG+ALS DE+ L V E+
Sbjct: 158 PLGGVYYVDPDFKTVTPIIQNISVANGIALSTDEKVLWVTET 199
>sp|Q5HKM9|DRP35_STAEQ Lactonase drp35 OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=drp35 PE=3 SV=1
Length = 325
Score = 33.9 bits (76), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 72 GLLKVSEEGVTV--LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGE 129
G+ +E+G + ++S N +D++ S G YFT S +
Sbjct: 111 GIFATTEKGEQIEEIISDLNTEYC--IDDMVFDSKGGFYFTD-----------FRGYSTQ 157
Query: 130 PHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171
P G + DP + ++ + ANG+ALS DE+ L V E+
Sbjct: 158 PLGGVYYVDPDFKTVTPIIQNISVANGIALSTDEKVLWVTET 199
>sp|Q7P0F1|HIS5_CHRVO Imidazole glycerol phosphate synthase subunit HisH
OS=Chromobacterium violaceum (strain ATCC 12472 / DSM
30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757)
GN=hisH PE=3 SV=1
Length = 212
Score = 33.5 bits (75), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 26/99 (26%)
Query: 57 TTKENNVIIVCDSQQGLLKVSEEGVTVLVSQFNGSQLRFANDVIEA-------------- 102
TT+ +C Q L + SEEG T + F G +RFA+D +
Sbjct: 72 TTQSKPFFGICVGAQLLFEHSEEGDTAGLGLFPGKVVRFADDQVAGGERLKVPHMGWNQV 131
Query: 103 ------------SDGSLYFTVSSTKFTPAEYYLDLVSGE 129
+DG ++ V S F PA+ L L +
Sbjct: 132 YQTRSHPLFAGIADGERFYFVHSYHFAPADAALTLAESD 170
>sp|Q7UZV8|RL6_PROMP 50S ribosomal protein L6 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplF PE=3 SV=1
Length = 179
Score = 33.1 bits (74), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 1 MIKLGEGIVNHPEDVSVDGNGVLYTATG-DGWIKRMHPNGTWEDWHQVGSQSLLGLTTTK 59
M ++G+ V PE VSVD G+ T G G +KR+ P G ++ Q +Q ++ TTK
Sbjct: 1 MSRIGKSPVQIPEKVSVDIKGLSITVKGPKGELKRLMPEGV--NFDQKENQIVVTPATTK 58
Query: 60 E 60
Sbjct: 59 R 59
>sp|Q01578|GNL_ZYMMO Gluconolactonase OS=Zymomonas mobilis subsp. mobilis (strain ATCC
31821 / ZM4 / CP4) GN=gnl PE=1 SV=2
Length = 356
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 5/120 (4%)
Query: 54 GLTTTKENNVIIVCDSQQGLLKVSE--EGVTVLVSQFNGSQLRFANDVIEASDGSLYFTV 111
G+ + + + + ++KV +V+V + G + ND+ + G++YFT
Sbjct: 131 GMKVGPDGKIWVADSGTRAIMKVDPVTRQRSVVVDNYKGKRFNSPNDLFFSKSGAVYFTD 190
Query: 112 SSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171
T + D+ +GV + P + L+ GL NG+ALS DE L V S
Sbjct: 191 PPYGLTNLDES-DIKEMNYNGV-FRLSPD-GRLDLIEAGLSRPNGLALSPDETKLYVSNS 247
>sp|Q4L9R6|DRP35_STAHJ Lactonase drp35 OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=drp35 PE=3 SV=1
Length = 325
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 15/106 (14%)
Query: 68 DSQQGLLKVSEEGVTV--LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDL 125
+S G+ E G ++S+ N +D++ S G YFT
Sbjct: 107 ESTGGIFATDEHGEQFEEIISELNTEYC--IDDMVFDSKGGFYFTD-----------FRG 153
Query: 126 VSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171
S P G + P + V+ + ANGVALS DE+ L V E+
Sbjct: 154 YSTNPKGGVYYVSPDFKTVTPVIQNISVANGVALSTDEKILWVTET 199
>sp|Q6GEL4|ECFA1_STAAR Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Staphylococcus aureus (strain MRSA252) GN=ecfA1 PE=3
SV=1
Length = 286
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 11/102 (10%)
Query: 74 LKVSEEGVTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTK-FTPAEYYLDLVSGEPHG 132
L+ E +L+S R+A++VI +GS+ S + F E D G P
Sbjct: 191 LQTDENKTIILISHDMNEVARYADEVIVMKEGSIVSQTSPKELFKDKEKLADWHIGLPEI 250
Query: 133 VLLKYD-PSTNQTSLVLDGLYFANGVALSEDERFLVVCESWK 173
V L+YD +QT L +AL+E E F+ + + W+
Sbjct: 251 VQLQYDFEQKHQTKL--------KDIALTE-EAFVSLYKEWQ 283
>sp|Q0JKD0|GLT1_ORYSJ Glutamate synthase 1 [NADH], chloroplastic OS=Oryza sativa subsp.
japonica GN=Os01g0681900 PE=2 SV=1
Length = 2167
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 13 EDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQG 72
+ V++ G+G A D K H +E ++G + G+ K + + IV Q+
Sbjct: 1807 KKVAIIGSGPAGLAAADQLNKMGHFVTVFERADRIGGLMMYGVPNMKTDKIEIV---QRR 1863
Query: 73 LLKVSEEGVTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTK 115
+ ++EEG+T +V+ GS ++ + + + + ++ +TK
Sbjct: 1864 VNLMAEEGITFVVNANVGSDPLYSIERLRSENDAVILACGATK 1906
>sp|P80457|XDH_BOVIN Xanthine dehydrogenase/oxidase OS=Bos taurus GN=XDH PE=1 SV=4
Length = 1332
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 32 IKRMHPNGTWEDWHQVGSQSLLGLTTT 58
K+ +P+G+WEDW Q + L+TT
Sbjct: 1104 FKKKNPDGSWEDWVMAAYQDRVSLSTT 1130
>sp|Q91090|PON2_MELGA Serum paraoxonase/arylesterase 2 OS=Meleagris gallopavo GN=PON2
PE=2 SV=1
Length = 354
Score = 30.4 bits (67), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 81/198 (40%), Gaps = 32/198 (16%)
Query: 3 KLGEGIVNHPEDVSVDGNGVLYTATGDGW--IKRMHPNGTWEDW---------------- 44
+L +GI ED+ + NG+ + ++G + +K + P+ E +
Sbjct: 43 RLIKGIEAGSEDIDILPNGLAFISSGLKYPGLKSLAPDKPGEIFLMDLNEKKPKASELRI 102
Query: 45 ---HQVGSQSLLGLTTTKENN----VIIVCDSQQG----LLKVSEEGVTVL-VSQFNGSQ 92
+GS + G++T + + + +V Q L K EE ++L +
Sbjct: 103 SRGFDLGSFNPHGISTYIDKDDTVYLFVVNHPHQKSTVELFKFMEEDNSLLHLKTIRHDL 162
Query: 93 LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLY 152
L NDV+ S Y T + +L++ G ++ Y P + V G Y
Sbjct: 163 LTSVNDVVAVGPDSFYATNDHYFYDFILMFLEMYLGLTWSNVVYYSPK--EVKEVAAGFY 220
Query: 153 FANGVALSEDERFLVVCE 170
ANG+ +S D++++ + +
Sbjct: 221 SANGINISPDKKYIYIAD 238
>sp|Q318J8|RL6_PROM9 50S ribosomal protein L6 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplF PE=3 SV=1
Length = 179
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 1 MIKLGEGIVNHPEDVSVDGNGVLYTATG-DGWIKRMHPNGTWED 43
M ++G+ V PE V+VD +G++ T G G +KR+ P G D
Sbjct: 1 MSRIGKTPVLIPEKVTVDLDGLIVTVKGPKGELKRLMPEGVSFD 44
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,167,352
Number of Sequences: 539616
Number of extensions: 2838545
Number of successful extensions: 4947
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4918
Number of HSP's gapped (non-prelim): 50
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)