BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030677
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 108/146 (73%), Gaps = 13/146 (8%)
Query: 6 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 65
MTSS+H++SDN + E+++ +S Q P+ ++ SI T V Y+ G ++MAP
Sbjct: 1 MTSSIHELSDNIGSHEKQEQRDSHFQPPIPS-ARNYESIVTSLV-YS--DPGTTNSMAPG 56
Query: 66 AYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 125
YPYPDPYYRSIFAP PPQPY G VHLQLMG+QQ GVPLP+DAVEEPVFVNAK
Sbjct: 57 QYPYPDPYYRSIFAP------PPQPYTG---VHLQLMGVQQQGVPLPSDAVEEPVFVNAK 107
Query: 126 QYHGILRRRQSRAKAESENKVLKSRK 151
QYHGILRRRQSRA+ ES+NKV+KSRK
Sbjct: 108 QYHGILRRRQSRARLESQNKVIKSRK 133
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/146 (55%), Positives = 100/146 (68%), Gaps = 15/146 (10%)
Query: 6 MTSSVHDMSDNSDADEQRKHPESQLQSSTPAMGMSHPSITTPNVQYATHQVGAGHAMAPA 65
MTSSVH++SDN+++ +++ P+SQ + P+ G S SI T +V MA
Sbjct: 1 MTSSVHELSDNNESHAKKERPDSQTRPQVPS-GRSSESIDTNSV--------YSEPMAHG 51
Query: 66 AYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAK 125
YPYPDPYYRS+FA Q Y P PY P V LQLMG+QQ GVPL DAVEEPVFVNAK
Sbjct: 52 LYPYPDPYYRSVFA---QQAYLPHPY---PGVQLQLMGMQQPGVPLQCDAVEEPVFVNAK 105
Query: 126 QYHGILRRRQSRAKAESENKVLKSRK 151
QYHGILRRRQSRAK E+ N+ +K++K
Sbjct: 106 QYHGILRRRQSRAKLEARNRAIKAKK 131
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 83.6 bits (205), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 47 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQ 106
P+ Q H VG ++ PY DPYY + Y P PYGG P +
Sbjct: 110 PHPQLVGHTVGWA-----SSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRM------- 157
Query: 107 AGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
PLP + +EPVFVNAKQY ILRRRQ+RAKAE E K++KSRK
Sbjct: 158 ---PLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRK 199
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 59 GHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEE 118
GH +A PY DPYY + Y Q +PY +G+ + LP D +E
Sbjct: 123 GHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPY----------LGMPRERTALPLDMAQE 172
Query: 119 PVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
PV+VNAKQY GILRRR++RAKAE E KV++ RK
Sbjct: 173 PVYVNAKQYEGILRRRKARAKAELERKVIRDRK 205
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 16/106 (15%)
Query: 47 PNVQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQ 106
PN+ +A A A ++ Y DP+Y + A Y PQ P + Q++ +
Sbjct: 122 PNIHFAP-------AQANFSFHYADPHYGGLLAA----TYLPQA----PTCNPQMVSMIP 166
Query: 107 AGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
VPLP + E +PVFVNAKQYH I+RRRQ RAK E++NK++++RK
Sbjct: 167 GRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARK 212
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
Query: 98 HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
HL++MG+ + VPLP E EP+FVNAKQYH ILRRR+ RAK E++NK++K RK
Sbjct: 157 HLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRK 211
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 53/92 (57%), Gaps = 14/92 (15%)
Query: 61 AMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVE-EP 119
+ A ++ Y DP++ + Y PQ P Q VPLP D +E EP
Sbjct: 127 SKANFSFHYADPHFGGLMPA----AYLPQATIWNP---------QMTRVPLPFDLIENEP 173
Query: 120 VFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
VFVNAKQ+H I+RRRQ RAK E++NK++K+RK
Sbjct: 174 VFVNAKQFHAIMRRRQQRAKLEAQNKLIKARK 205
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 90 PYGGQPMV-HLQLMGIQQAGVPLPTDAVE-EPVFVNAKQYHGILRRRQSRAKAESENKVL 147
PY Q V H Q+ G+ + +PLP + E EP+FVNAKQY ILRRR+ RAK E++NK++
Sbjct: 141 PYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLI 200
Query: 148 KSRK 151
K RK
Sbjct: 201 KVRK 204
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Query: 109 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+
Sbjct: 251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR 295
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Query: 109 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+
Sbjct: 252 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR 296
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Query: 109 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR 290
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%), Gaps = 2/45 (4%)
Query: 109 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
+PLP + EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+
Sbjct: 246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERR 290
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 114 DAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKA 152
+ VEEP++VNAKQY+ IL+RR +RAK ESENK+ K+RKA
Sbjct: 225 EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKA 263
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 20/103 (19%)
Query: 49 VQYATHQVGAGHAMAPAAYPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAG 108
+Q A + G M +P+ + YY + A Y Q G+ M+ L+ M ++ G
Sbjct: 82 MQSACFEFGFAQPMMYTKHPHVEQYYGVVSA------YGSQRSSGRVMIPLK-METEEDG 134
Query: 109 VPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
++VN+KQYHGI+RRRQSRAKAE K+ + RK
Sbjct: 135 T----------IYVNSKQYHGIIRRRQSRAKAE---KLSRCRK 164
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 24/91 (26%)
Query: 67 YPYPDPYYRSIFAPYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQ 126
YPY + Y + + Y G Q V L PL + + ++VN+KQ
Sbjct: 105 YPYGEQQYYGVVSAY----------GSQSRVML----------PLNMETEDSTIYVNSKQ 144
Query: 127 YHGILRRRQSRAKAES--ENKVLKSRKACHK 155
YHGI+RRRQSRAKA + + K L SR C K
Sbjct: 145 YHGIIRRRQSRAKAAAVLDQKKLSSR--CRK 173
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 97 VHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
+ LQ + P++ +E+P +VNAKQY+ IL+RR +RAK E K+ + R+
Sbjct: 164 MELQRTKPHDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERR 218
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 111 LPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
L T E+P +VNAKQY+ IL+RR +RAK E + ++ + RK
Sbjct: 152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERK 192
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 26/34 (76%)
Query: 118 EPVFVNAKQYHGILRRRQSRAKAESENKVLKSRK 151
E ++VNAKQYH IL+RR++RAK E + +++ K
Sbjct: 8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTK 41
>sp|Q67Q46|MURA1_SYMTH UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1
OS=Symbiobacterium thermophilum (strain T / IAM 14863)
GN=murA1 PE=3 SV=1
Length = 441
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 8/96 (8%)
Query: 79 APYDAQPYPPQPYGGQPMVHLQLMGIQQAGVPLPTDAVEEPVFVNAKQYHGILRRRQSRA 138
A PYP P QP Q+M + A T + E +F N + LRR +
Sbjct: 317 ADVKTLPYPGFPTDMQP----QMMAL--AATADGTSIITETIFENRFKVADELRRMGANI 370
Query: 139 KAESENKVLKSRKACHKLQVLCPSF--GLVFYLIGM 172
K E V++ + V+CP+ G+ L G+
Sbjct: 371 KTEGRTAVVQGVPSLSGATVVCPALREGMALILAGL 406
>sp|Q8JSZ3|GP_CCHFI Envelope glycoprotein OS=Crimean-Congo hemorrhagic fever virus
(strain Nigeria/IbAr10200/1970) GN=GP PE=3 SV=1
Length = 1684
Score = 30.8 bits (68), Expect = 5.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 17 SDADEQRKHPESQLQSSTPAMGMS-----HPSITTPNVQYATH 54
+D+ +HPES QS+TP + S HP TP TH
Sbjct: 196 NDSHNATEHPESLTQSATPGLMTSPTQIVHPQSATPITVQDTH 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,658,963
Number of Sequences: 539616
Number of extensions: 3170666
Number of successful extensions: 8152
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 8026
Number of HSP's gapped (non-prelim): 161
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)