Query 030680
Match_columns 173
No_of_seqs 138 out of 1045
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 02:58:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030680.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030680hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0364 Zwf Glucose-6-phosphat 100.0 1.7E-70 3.6E-75 496.4 17.3 170 1-172 234-407 (483)
2 PF02781 G6PD_C: Glucose-6-pho 100.0 1.7E-69 3.7E-74 468.0 16.8 165 1-171 49-213 (293)
3 PLN02640 glucose-6-phosphate 1 100.0 8.9E-69 1.9E-73 495.0 18.8 171 1-171 321-491 (573)
4 PLN02333 glucose-6-phosphate 1 100.0 2.8E-68 6E-73 493.7 18.6 172 1-172 350-521 (604)
5 PRK05722 glucose-6-phosphate 1 100.0 5.1E-68 1.1E-72 485.4 19.1 169 1-172 244-416 (495)
6 TIGR00871 zwf glucose-6-phosph 100.0 4.6E-67 1E-71 477.8 18.7 166 1-172 235-402 (482)
7 PRK12853 glucose-6-phosphate 1 100.0 1.6E-66 3.5E-71 474.1 19.3 167 1-171 234-402 (482)
8 PTZ00309 glucose-6-phosphate 1 100.0 2.2E-66 4.7E-71 477.8 18.4 165 1-172 290-454 (542)
9 PRK12854 glucose-6-phosphate 1 100.0 7.1E-65 1.5E-69 463.2 17.9 160 1-172 242-401 (484)
10 PLN02539 glucose-6-phosphate 1 100.0 7.6E-65 1.7E-69 463.6 16.9 157 1-172 254-410 (491)
11 KOG0563 Glucose-6-phosphate 1- 100.0 7.4E-58 1.6E-62 411.3 14.6 167 1-173 251-417 (499)
12 PF06510 DUF1102: Protein of u 77.7 35 0.00075 27.4 10.6 94 57-168 36-138 (146)
13 PF08877 MepB: MepB protein; 53.2 77 0.0017 24.6 6.9 60 75-145 5-67 (123)
14 PF14345 GDYXXLXY: GDYXXLXY pr 51.9 47 0.001 25.5 5.6 17 35-51 26-42 (144)
15 TIGR03159 cas_Csc1 CRISPR-asso 48.3 15 0.00033 31.3 2.4 42 57-103 110-151 (223)
16 KOG0946 ER-Golgi vesicle-tethe 47.5 11 0.00025 37.8 1.8 40 1-51 312-351 (970)
17 PF07157 DNA_circ_N: DNA circu 47.0 16 0.00034 27.0 2.1 16 87-102 8-23 (93)
18 PF15069 FAM163: FAM163 family 46.5 30 0.00065 27.7 3.7 31 62-92 48-78 (143)
19 COG5649 Uncharacterized conser 46.1 6.6 0.00014 30.6 -0.0 29 84-115 48-81 (132)
20 TIGR00156 conserved hypothetic 45.4 9.2 0.0002 29.8 0.7 15 80-94 84-98 (126)
21 PRK10053 hypothetical protein; 38.5 14 0.0003 28.9 0.7 16 79-94 87-102 (130)
22 COG3564 Uncharacterized protei 35.0 33 0.00071 26.1 2.2 33 90-122 62-94 (116)
23 PF01474 DAHP_synth_2: Class-I 27.8 61 0.0013 30.3 3.1 55 15-71 68-137 (439)
24 KOG3997 Major apurinic/apyrimi 26.8 15 0.00032 31.9 -1.0 22 78-99 242-263 (281)
25 PRK13245 hetR heterocyst diffe 25.6 30 0.00064 30.1 0.7 21 77-99 192-212 (299)
26 COG0147 TrpE Anthranilate/para 25.5 20 0.00044 33.3 -0.4 54 29-101 375-429 (462)
27 PF04076 BOF: Bacterial OB fol 22.5 46 0.001 24.8 1.1 16 79-94 60-75 (103)
28 TIGR01358 DAHP_synth_II 3-deox 21.0 1.3E+02 0.0029 28.2 4.0 51 15-66 67-132 (443)
29 PF08381 BRX: Transcription fa 20.4 1.6E+02 0.0035 20.1 3.3 25 141-166 9-33 (59)
No 1
>COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-70 Score=496.37 Aligned_cols=170 Identities=48% Similarity=0.759 Sum_probs=160.1
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCc----CceeeccccccCCCCCCCCCCcCCCCCCCCCCccc
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLL----EDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPT 76 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~----~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeT 76 (173)
|||||||||||+|||||+++++++||+||+|||||++|++. +++|||||++|.++|+.||||++|+||++||+|||
T Consensus 234 vQNHlLQlL~LvAME~P~~~~ad~irdEKvKvLkal~p~~~~~~~~~~VrGQY~ag~~~g~~v~gY~eE~gv~~dS~tET 313 (483)
T COG0364 234 VQNHLLQLLCLVAMEPPASFSADDIRDEKVKVLKALRPISEENVKEDTVRGQYTAGEIDGKKVPGYLEEEGVAKDSNTET 313 (483)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhcCCCChhhhhhceeecceeccccCCcccCccccCCCCCCCCCcce
Confidence 69999999999999999999999999999999999999984 56899999999999999999999999999999999
Q ss_pred eeEEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCC
Q 030680 77 FAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPG 156 (173)
Q Consensus 77 faA~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG 156 (173)
|||+|++||||||+||||||||||||++|.|||+|+||++|+++|....+ ....+|.|+|||||+|+|+|++++|.||
T Consensus 314 FvA~k~~IdnwRW~GVPFylRtGKrl~~k~teI~i~FK~~p~~lF~~~~~--~~~~~N~LviriQPdegI~l~~~~K~PG 391 (483)
T COG0364 314 FVAIKLEIDNWRWAGVPFYLRTGKRLPKKVTEIVIHFKRVPHNLFSDPSR--SSLEQNRLVIRIQPDEGISLKFNVKVPG 391 (483)
T ss_pred eEEEEEEecCCccCCCCEEEEcCCCCCCCeeEEEEEECCCChhhcCCccc--CcccCcEEEEEECCCCceEEEEeccCCC
Confidence 99999999999999999999999999999999999999999999975321 1225799999999999999999999999
Q ss_pred CCCceeEEeeeeeecC
Q 030680 157 LGMRLDRSDLNLLYRS 172 (173)
Q Consensus 157 ~~~~~~~~~l~~~~~~ 172 (173)
.++...+++|+|.|..
T Consensus 392 ~~~~~~~l~l~f~~~~ 407 (483)
T COG0364 392 LGLQTRPLDLDFSYDS 407 (483)
T ss_pred Cccccceeeeeccccc
Confidence 9999999999999853
No 2
>PF02781 G6PD_C: Glucose-6-phosphate dehydrogenase, C-terminal domain; InterPro: IPR022675 Glucose-6-phosphate dehydrogenase (1.1.1.49 from EC) (G6PDH) is a ubiquitous protein, present in bacteria and all eukaryotic cell types []. The enzyme catalyses the the first step in the pentose pathway, i.e. the conversion of glucose-6-phosphate to gluconolactone 6-phosphate in the presence of NADP, producing NADPH. The ubiquitous expression of the enzyme gives it a major role in the production of NADPH for the many NADPH-mediated reductive processes in all cells []. Deficiency of G6PDH is a common genetic abnormality affecting millions of people worldwide. Many sequence variants, most caused by single point mutations, are known, exhibiting a wide variety of phenotypes []. This entry represents the C-terminal domain of glucose-6-phosphate dehydrogenase.; GO: 0004345 glucose-6-phosphate dehydrogenase activity, 0050661 NADP binding, 0006006 glucose metabolic process, 0055114 oxidation-reduction process; PDB: 1QKI_E 2BH9_A 2BHL_A 4EM5_C 4E9I_A 2DPG_A 1E77_A 1E7M_A 1H9B_A 1E7Y_A ....
Probab=100.00 E-value=1.7e-69 Score=467.99 Aligned_cols=165 Identities=52% Similarity=0.844 Sum_probs=134.4
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||||++++++|||+||+||||||+|++++++|||||++|.++++.++||++|+||+++|+||||||+
T Consensus 49 vQNHllQlL~lvaMe~P~~~~~~~ir~eK~kvL~~l~~~~~~~~V~GQY~~~~~~~~~~~gY~~e~gV~~~S~TeTf~a~ 128 (293)
T PF02781_consen 49 VQNHLLQLLALVAMEPPASLDAEDIRDEKVKVLRSLRPIDPEDVVRGQYTAGEIGGEEVPGYREEEGVPPDSTTETFAAV 128 (293)
T ss_dssp TTTHHHHHHHHHH----SSSSHHHHHHHHHHHHTTB----CCCEEEEEEEEESSSTGGSS-GGGSTTS-TT----SEEEE
T ss_pred HHHHHHHHHHHHHhcCccCCCHHHHHHHHHHHHHhhCCCccccccccccccCccCCccCccccccCCCCCCCCCCccEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|++|.|||+|+||++|+.+|... ..+|.|+|+|||+++|+|++++|.||.++.
T Consensus 129 ~l~Idn~RW~gVPF~lrtGK~L~~k~teI~I~Fk~~~~~~f~~~------~~~N~Lvi~iqP~e~i~l~~~~K~Pg~~~~ 202 (293)
T PF02781_consen 129 KLFIDNWRWAGVPFYLRTGKRLAEKSTEIRIVFKPPPHNLFGEN------CPPNRLVIRIQPDEGISLRFNIKKPGLSFE 202 (293)
T ss_dssp EEEB-STTTTT-EEEEEEESSBSS-EEEEEEEE---STTTSCCS----------EEEEEEESS-EEEEEEEEE-SSSS-S
T ss_pred EEEEeCCcccCCeeeEEcccccccceEEEEEEEccCChhhcccc------ccCCEEEEecCCccchhhhhccCCCCCCCc
Confidence 99999999999999999999999999999999999999999642 368999999999999999999999999999
Q ss_pred eeEEeeeeeec
Q 030680 161 LDRSDLNLLYR 171 (173)
Q Consensus 161 ~~~~~l~~~~~ 171 (173)
+++++|+++|.
T Consensus 203 ~~~~~L~~~~~ 213 (293)
T PF02781_consen 203 LEPVELDFSYS 213 (293)
T ss_dssp EEEEEEEEEHH
T ss_pred ceEEEEeeeec
Confidence 99999999985
No 3
>PLN02640 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=8.9e-69 Score=495.04 Aligned_cols=171 Identities=94% Similarity=1.389 Sum_probs=161.5
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||||||||+++++++||+||+||||||||++++++|||||.+|.++|+.++||++|+||+|||+||||||+
T Consensus 321 vQNHLlQlLaLvAMEpP~~~~a~~IRdEKvkVLrairp~~~~~~VrGQY~~g~~~g~~v~gY~eE~gV~~dS~TETFaA~ 400 (573)
T PLN02640 321 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMKPLQLEDVIVGQYKGHSKGGKSYPAYTDDPTVPKHSLTPTFAAA 400 (573)
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhccCCCChhceEEecccCCCCCCCcCCCcccCCCCCCCCCCcceeEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
|++||||||+||||||||||+|++|.+||+|+||++|+.+|.+....+....+|+|+|+|||+|+|+|++++|.||.++.
T Consensus 401 kl~IDN~RW~GVPFyLRTGKrL~~r~teI~I~FK~~p~~lF~~~~~~~~~~~~N~LviriqP~e~I~l~~~~K~PG~~~~ 480 (573)
T PLN02640 401 ALFINNARWDGVPFLMKAGKALHTRRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLGMR 480 (573)
T ss_pred EEEEcCcccCCCCEEEEccCCCCcCeeEEEEEeccCChhhcccccccccCCCCCEEEEEECCCCcEEEEEeccCCCCCCc
Confidence 99999999999999999999999999999999999999999643211122358999999999999999999999999999
Q ss_pred eeEEeeeeeec
Q 030680 161 LDRSDLNLLYR 171 (173)
Q Consensus 161 ~~~~~l~~~~~ 171 (173)
+++++|+++|.
T Consensus 481 l~~~~L~~~~~ 491 (573)
T PLN02640 481 LDRSDLNLLYR 491 (573)
T ss_pred eEEEeeeeech
Confidence 99999999985
No 4
>PLN02333 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=2.8e-68 Score=493.69 Aligned_cols=172 Identities=86% Similarity=1.302 Sum_probs=161.6
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||||.++++++||+||+||||||+|++.+++|||||.+|.++|+.++||+||+||++||+||||||+
T Consensus 350 vQNHLLQlLaLvAME~P~s~~aedIRdEKvKVLrsirpi~~~~vVrGQY~~g~~~g~~~~GY~de~~V~~dS~TeTFaA~ 429 (604)
T PLN02333 350 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRPIQLEDVVIGQYKSHTKGGVTYPAYTDDKTVPKGSLTPTFAAA 429 (604)
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhccCCCCccceEEecccCCCcCCccCCCcccCCCCCCCCCCcceeeE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|++|.+||+|+||++|+.+|...........+|+|||+|||+|+|+|++++|.||.++.
T Consensus 430 ~l~IDN~RW~GVPF~LRtGK~L~~r~tEI~I~FK~vp~~lf~~~~~~~~~~~~N~LViriQP~e~I~l~~~~K~PG~~~~ 509 (604)
T PLN02333 430 ALFIDNARWDGVPFLMKAGKALHTKSAEIRVQFRHVPGNLYNRNFGTDLDQATNELVIRVQPDEAIYLKINNKVPGLGMR 509 (604)
T ss_pred EEEEcCcccCCCCEEEEccCCCCcCceEEEEEecCCChhhcccccccccCCCCCEEEEEECCCCeEEEEEecCCCCCCCc
Confidence 99999999999999999999999999999999999999999643111111258999999999999999999999999999
Q ss_pred eeEEeeeeeecC
Q 030680 161 LDRSDLNLLYRS 172 (173)
Q Consensus 161 ~~~~~l~~~~~~ 172 (173)
+++++|++.|.+
T Consensus 510 l~~~~L~~~y~~ 521 (604)
T PLN02333 510 LDRSNLNLLYAA 521 (604)
T ss_pred eeEEEEEeechh
Confidence 999999999963
No 5
>PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated
Probab=100.00 E-value=5.1e-68 Score=485.36 Aligned_cols=169 Identities=48% Similarity=0.756 Sum_probs=160.3
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCc----eeeccccccCCCCCCCCCCcCCCCCCCCCCccc
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLED----VIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPT 76 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~----~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeT 76 (173)
|||||||||||+|||||.++++++||+||+||||||+|+++++ +|||||.+|.++|+.++||++|+||+|||+|||
T Consensus 244 vQNHLlQlLalvAME~P~~~~~~~ir~eK~kvL~sir~~~~~~~~~~~VrGQY~~g~~~g~~~~gY~~e~~V~~~S~TeT 323 (495)
T PRK05722 244 VQNHLLQLLALVAMEPPASLDADSIRDEKVKVLRALRPITPEDVKENTVRGQYTAGWIGGKPVPGYREEEGVNPDSTTET 323 (495)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcCCCCChhhhhcceeeccccCCCCCCCCCCCccCCCCCCCCCCCcc
Confidence 7999999999999999999999999999999999999999977 899999999999999999999999999999999
Q ss_pred eeEEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCC
Q 030680 77 FAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPG 156 (173)
Q Consensus 77 faA~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG 156 (173)
|||+||+||||||+||||||||||+|++|.|||+|+||++|+.+|... .....+|+|||+|||+++|+|++++|.||
T Consensus 324 faa~kl~Idn~RW~GVPF~lrtGK~L~~~~teI~i~Fk~~p~~~f~~~---~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG 400 (495)
T PRK05722 324 FVALKLEIDNWRWAGVPFYLRTGKRLPKKVTEIVIVFKPPPHNLFEES---AEELGPNKLVIRIQPDEGISLRFNAKVPG 400 (495)
T ss_pred eeEEEEEEcCCccCCceEEEEecCCCCCceEEEEEEEeCCChhhcccc---ccCCCCCEEEEEECCCCceEEEEEecCCC
Confidence 999999999999999999999999999999999999999999999532 11235899999999999999999999999
Q ss_pred CCCceeEEeeeeeecC
Q 030680 157 LGMRLDRSDLNLLYRS 172 (173)
Q Consensus 157 ~~~~~~~~~l~~~~~~ 172 (173)
.++.+++++|+++|.+
T Consensus 401 ~~~~~~~~~l~~~~~~ 416 (495)
T PRK05722 401 EGMELRPVKLDFSYSE 416 (495)
T ss_pred CCCceEEEEEEeECcc
Confidence 9999999999999964
No 6
>TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase. This is a well-studied enzyme family, with sequences available from well over 50 species. The trusted cutoff is set above the score for the Drosophila melanogaster CG7140 gene product, a homolog of unknown function. G6PD homologs from the bacteria Aquifex aeolicus and Helicobacter pylori lack several motifs well conserved most other members, were omitted from the seed alignment, and score well below the trusted cutoff.
Probab=100.00 E-value=4.6e-67 Score=477.77 Aligned_cols=166 Identities=50% Similarity=0.828 Sum_probs=159.1
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcC--ceeeccccccCCCCCCCCCCcCCCCCCCCCCcccee
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLE--DVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFA 78 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~--~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfa 78 (173)
|||||||||||+|||||+++++++||+||+|||||++|++++ ++|||||++|.++|+.++||++|+||+++|+|||||
T Consensus 235 vQNHLlQlL~lvAMe~P~~~~a~~ir~eK~kVL~~~r~~~~~~~~~vrGQY~~g~~~g~~~~gY~~e~~V~~~S~TeTfa 314 (482)
T TIGR00871 235 VQNHLLQLLCLVAMEPPASFDADSIRDEKVKVLKALRPIDPDDNNVVRGQYGAGEIGGVSVPGYLEEEGVDKDSTTETFA 314 (482)
T ss_pred HHhHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhcCCCCCcccCceEeccccCCCCCCcCCCCccCCCCCCCCCCCcceE
Confidence 799999999999999999999999999999999999999986 899999999999999999999999999999999999
Q ss_pred EEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCC
Q 030680 79 AAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLG 158 (173)
Q Consensus 79 A~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~ 158 (173)
|++++||||||+||||||||||+|+++.+||+|+||++|+.+|... ..+|+|||+|||+++|+|++++|.||.+
T Consensus 315 a~~l~Idn~RW~GVPF~lrtGK~L~~~~~eI~i~fk~~p~~~f~~~------~~~n~Lvi~iqP~e~i~l~~~~k~pG~~ 388 (482)
T TIGR00871 315 ALKLYIDNWRWAGVPFYLRTGKRLPEKVTEIRIQFKDVPLLLFKQN------ERNNELVIRIQPDEGVYLKFNAKKPGLN 388 (482)
T ss_pred EEEEEEcCcccCCceEEEEeccccCCCeEEEEeeecCCChhhccCC------CCCCEEEEEECCCCeEEEEEeccCCCCC
Confidence 9999999999999999999999999999999999999999999532 1489999999999999999999999999
Q ss_pred CceeEEeeeeeecC
Q 030680 159 MRLDRSDLNLLYRS 172 (173)
Q Consensus 159 ~~~~~~~l~~~~~~ 172 (173)
+.+++++|+++|.+
T Consensus 389 ~~~~~~~l~~~~~~ 402 (482)
T TIGR00871 389 FETRPVKLDFSYGS 402 (482)
T ss_pred CceeEEEEEeechh
Confidence 99999999999963
No 7
>PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-66 Score=474.05 Aligned_cols=167 Identities=48% Similarity=0.772 Sum_probs=159.6
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCce--eeccccccCCCCCCCCCCcCCCCCCCCCCcccee
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDV--IVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFA 78 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~--vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfa 78 (173)
|||||||||||+|||||.++++++||+||+|||||++|++++++ |||||.+|.++|+.++||+||+||+++|+|||||
T Consensus 234 vQNHLlQlLalvAME~P~~~~~~~ir~eK~kvL~s~r~~~~~~v~~vrGQY~~g~~~g~~~~gY~~e~gV~~~S~TeTfa 313 (482)
T PRK12853 234 VQNHLLQLLALVAMEPPASFDADAVRDEKAKVLRAIRPLDPDDVHTVRGQYTAGTVGGEPVPGYREEPGVDPDSRTETFV 313 (482)
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHhcCCCCCcccccEEEecCcCCCCCCCCCCCcccCCCCCCCCCCcceE
Confidence 79999999999999999999999999999999999999999887 9999999999999999999999999999999999
Q ss_pred EEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCC
Q 030680 79 AAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLG 158 (173)
Q Consensus 79 A~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~ 158 (173)
|++|+||||||+||||||||||+|+++.+||+|+||++|+.+|... ....+|+|+|+|||+++|+|++++|.||.+
T Consensus 314 a~~l~Idn~RW~GVPF~lrtGK~L~~~~~eI~i~fk~~p~~~f~~~----~~~~~n~Lvi~iqP~e~i~l~~~~k~pg~~ 389 (482)
T PRK12853 314 ALKLEIDNWRWAGVPFYLRTGKRLAERRTEIVITFKPVPHALFRGT----GVEPPNRLVIRLQPDEGISLELNVKRPGPG 389 (482)
T ss_pred EEEEEEcCcccCCCcEEEEccCCCCCceEEEEEEEcCCChhhccCc----cCCCCCEEEEEECCCCcEEEEEEecCCCCC
Confidence 9999999999999999999999999999999999999999999532 112489999999999999999999999999
Q ss_pred CceeEEeeeeeec
Q 030680 159 MRLDRSDLNLLYR 171 (173)
Q Consensus 159 ~~~~~~~l~~~~~ 171 (173)
+.+++++|+++|.
T Consensus 390 ~~~~~~~l~~~~~ 402 (482)
T PRK12853 390 MRLRPVELDADYA 402 (482)
T ss_pred CceEEEeEEeEcc
Confidence 9999999999996
No 8
>PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=2.2e-66 Score=477.83 Aligned_cols=165 Identities=56% Similarity=0.909 Sum_probs=155.7
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||||+++++++||+||+||||||+|++++++|||||.++ .+| .++||++|+||+|||+||||||+
T Consensus 290 vQNHLlQlLalvAMEpP~~~~a~~irdeKvkVLrslrpi~~~~~VrGQY~~~-~~~-~v~gY~~e~gV~~dS~TeTFaA~ 367 (542)
T PTZ00309 290 MQNHLLQILALLAMEKPVSLSAEDIRDEKVKVLKCIEPIKMEECVLGQYTAS-ADG-SIPGYLEDEGVPKDSTTPTFAAA 367 (542)
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhCcCCCCccceEEecccCC-CCC-CCCCcccCCCCCCCCCccceeEE
Confidence 6999999999999999999999999999999999999999999999999655 455 89999999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|++|.|||+|+||++|+.+|... ...+|+|||+|||+|+|+|++++|.||.++.
T Consensus 368 kl~IdN~RW~GVPFylRtGK~L~~r~teI~I~FK~~p~~~f~~~-----~~~~N~Lvi~iqP~e~i~l~~~~K~PG~~~~ 442 (542)
T PTZ00309 368 VLHINNDRWEGVPFILEAGKALEERYVEIRIQFKGVDEFRPSGD-----DTQRNELVIRAQPSEAMYLKITAKVPGLSND 442 (542)
T ss_pred EEEecCcccCCceEEEEeccCcCCCeeEEEEEEecCChhhccCC-----CCCCCEEEEEECCCCeEEEEEeccCCCCCCc
Confidence 99999999999999999999999999999999999999999632 1358999999999999999999999999999
Q ss_pred eeEEeeeeeecC
Q 030680 161 LDRSDLNLLYRS 172 (173)
Q Consensus 161 ~~~~~l~~~~~~ 172 (173)
+++++|+++|..
T Consensus 443 l~~~~l~~~~~~ 454 (542)
T PTZ00309 443 LHQTELDLTYKT 454 (542)
T ss_pred eeEeeEEEEchh
Confidence 999999999863
No 9
>PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional
Probab=100.00 E-value=7.1e-65 Score=463.17 Aligned_cols=160 Identities=36% Similarity=0.629 Sum_probs=150.7
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||||.++++++||+||+||||||||++++++|||||. ||++|+||+|+|+||||||+
T Consensus 242 vQNHLlQlLalvAMEpP~~~~a~~ir~eK~kvLrslrp~~~~~~VrGQY~----------gY~~e~gV~~~S~TeTfaa~ 311 (484)
T PRK12854 242 VVTHLFQVLAFVAMEPPTALEPDAISEEKNKVFRSMRPLDPAEVVRGQYS----------GYRDEPGVAPDSTTETFVAL 311 (484)
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCcCCCccceEeeccc----------ccccCCCCCCCCCCcceeEE
Confidence 79999999999999999999999999999999999999999999999996 79999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|++|.|||+|+||++|+.+|.... .....+|+|+|+|||+|+|+|++++|.||.++.
T Consensus 312 kl~Idn~RW~GVPFylrtGK~L~~~~teI~I~Fk~~p~~~f~~~~--~~~~~~N~Lvi~iqP~e~i~l~~~~K~pg~~~~ 389 (484)
T PRK12854 312 KVWIDNWRWAGVPFYLRTGKRMAEGQRIISIAFREPPYSMFPAGS--VGAQGPDHLTFDLADNSKVSLSFYGKRPGPGMR 389 (484)
T ss_pred EEEEcCCccCCceEEEEecCccCCceEEEEEEecCCChhhccccc--ccCCCCCEEEEEECCCCeEEEEEEecCCCCCCc
Confidence 999999999999999999999999999999999999999995321 112358999999999999999999999999999
Q ss_pred eeEEeeeeeecC
Q 030680 161 LDRSDLNLLYRS 172 (173)
Q Consensus 161 ~~~~~l~~~~~~ 172 (173)
+++++|+++|..
T Consensus 390 l~~~~l~~~~~~ 401 (484)
T PRK12854 390 LDKLSLQFSLKD 401 (484)
T ss_pred eeEEEEEeeccc
Confidence 999999999963
No 10
>PLN02539 glucose-6-phosphate 1-dehydrogenase
Probab=100.00 E-value=7.6e-65 Score=463.62 Aligned_cols=157 Identities=57% Similarity=0.962 Sum_probs=149.8
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||||+++++++||+||+|||||++|++++++||||| +||++|+||+|||+||||||+
T Consensus 254 vQNHLlQlLalvAMEpP~~~~~~~ir~eK~kVL~s~rp~~~~~~VrGQY----------~gY~ee~gV~~dS~TeTfaa~ 323 (491)
T PLN02539 254 IQNHLLQVLCLVAMEKPVSLKPEHIRDEKVKVLQSVEPIKDEEVVLGQY----------EGYRDDPTVPDDSNTPTFASV 323 (491)
T ss_pred HHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHhccCCCCccceeeecC----------ccccccCCCCCCCCcchheeE
Confidence 6999999999999999999999999999999999999999999999999 589999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|+++.+||+|+||++|+.+|... ...+|+|||+|||+|+|+|++++|.||.++.
T Consensus 324 kl~Idn~RW~GVPFylrtGK~L~~~~teI~I~Fk~~p~~~f~~~-----~~~~N~Lvi~iqP~e~i~l~~~~k~pG~~~~ 398 (491)
T PLN02539 324 VLRINNERWEGVPFILKAGKALDSRKAEIRVQFKDVPGDIFKCQ-----KQGRNEFVIRLQPSEAMYMKLTVKQPGLEMS 398 (491)
T ss_pred EEEecCcccCCCCEEEEccCCCCcCeeEEEEEeccCChhhcccC-----CCCCCEEEEEECCCCcEEEEEeccCCCCCCc
Confidence 99999999999999999999999999999999999999999532 1258999999999999999999999999999
Q ss_pred eeEEeeeeeecC
Q 030680 161 LDRSDLNLLYRS 172 (173)
Q Consensus 161 ~~~~~l~~~~~~ 172 (173)
+++++|+++|.+
T Consensus 399 ~~~~~l~~~~~~ 410 (491)
T PLN02539 399 TVQSELDLSYGQ 410 (491)
T ss_pred eeEeeeeeechh
Confidence 999999999963
No 11
>KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.4e-58 Score=411.32 Aligned_cols=167 Identities=64% Similarity=1.042 Sum_probs=157.3
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||+|||.|.|++|+|||+||+|||||++|++.+++|.|||.++..++ +|||+|.++|+.||.|+||||+
T Consensus 251 vQNHLlQiL~LvAME~P~s~~aedir~eKVkvLks~~~v~~~dvVlGQY~~~~~g~--~~gy~dd~~V~~dS~tpTfaa~ 328 (499)
T KOG0563|consen 251 VQNHLLQILTLVAMEKPKSLDAEDIRDEKVKVLKSIRPVDLEDVVLGQYKSSSDGK--VPGYLDDKTVPKDSLTPTFAAV 328 (499)
T ss_pred HHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhhcCCchhheEEeeeccccccC--CCccccCCCCCCCCCCcceeeE
Confidence 69999999999999999999999999999999999999999999999999877654 5699999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
.++|||+||+||||+||+||+|+++.+||+|+||..+..+|+... +..+|+|||||||+|.|+|++|+|+||.++.
T Consensus 329 ~l~Idn~RW~GVPFil~aGKal~e~~~eiriqFk~v~g~lf~~~~----~~~~neLVirvqP~eavylk~~~k~Pgl~~~ 404 (499)
T KOG0563|consen 329 ALHIDNERWEGVPFILRAGKALNERKAEIRIQFKAVPGGLFSDVR----DCKRNELVIRVQPDEAVYLKINIKQPGLGMQ 404 (499)
T ss_pred EEeecCccccCCCEEEEcccccccceeEEEEEeeccCCccccCcc----ccccceEEEEecCChheeeEeecCCCCccCC
Confidence 999999999999999999999999999999999999999997432 1357999999999999999999999999999
Q ss_pred eeEEeeeeeecCC
Q 030680 161 LDRSDLNLLYRSR 173 (173)
Q Consensus 161 ~~~~~l~~~~~~~ 173 (173)
+...+||+.|.++
T Consensus 405 ~~~~eldl~y~~r 417 (499)
T KOG0563|consen 405 PDESELDLLYSDR 417 (499)
T ss_pred cchhhcCCchhhh
Confidence 9999999999753
No 12
>PF06510 DUF1102: Protein of unknown function (DUF1102); InterPro: IPR009482 This family consists of several hypothetical archaeal proteins of unknown function.
Probab=77.69 E-value=35 Score=27.38 Aligned_cols=94 Identities=15% Similarity=0.350 Sum_probs=56.2
Q ss_pred CCCCCCcCCCCCCCCCCccceeEEeeeeecCCcCC---CceEEeccccCcceeeEEEEEeecCC-CcccccCCC-----C
Q 030680 57 KSYPAYIDDPTVPKDSLTPTFAAAALFINNARWDG---VPFLMKAGKALHTKRAEIRVQFRHVP-GNLYKRNFG-----T 127 (173)
Q Consensus 57 ~~~~gY~~e~gV~~~S~TeTfaA~~l~Idn~RW~G---VPfylrtGK~L~~k~teI~i~Fk~~p-~~~f~~~~~-----~ 127 (173)
...||| -.|+.|+|. .-.--.|.|-|.-|.. +|+.+ +|. -..+ ..+|.+... .
T Consensus 36 PnyPGy--G~GlSp~S~--Y~Fd~VF~VsN~lwEn~~~~~IcV-------------~I~-s~~~~i~fy~~~~~~~~~~~ 97 (146)
T PF06510_consen 36 PNYPGY--GDGLSPNST--YVFDEVFEVSNHLWENGADVPICV-------------TIS-SSSDSIEFYTGDYDSYITGP 97 (146)
T ss_pred CCCCCc--ccccCCCce--EeeeeEEEeecccccccCCceEEE-------------EEe-cCCCcEEEEecCCCccccCC
Confidence 357888 578998874 3334678899999997 77632 222 1111 123332110 0
Q ss_pred CCCCCCcEEEEEecCCCcEEEEEEecCCCCCCceeEEeeee
Q 030680 128 DLDKATNELVLRLQPDEAIYLKINNKVPGLGMRLDRSDLNL 168 (173)
Q Consensus 128 ~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~~~~~~l~~ 168 (173)
.+....+.|-|.|+|.+.+.+-|....-|........+|.+
T Consensus 98 ~sd~a~~~i~ftv~~ge~v~VGm~~~~tg~~lG~~~~~~tI 138 (146)
T PF06510_consen 98 GSDSARQSICFTVEPGESVKVGMIFDSTGDSLGDYDGQITI 138 (146)
T ss_pred ccccccceEEEEecCCCeeEEEEEEecCCCCCcceeeEEEE
Confidence 11123478999999999998888777655544444444443
No 13
>PF08877 MepB: MepB protein; InterPro: IPR011235 This is a family of uncharacterised bacterial proteins.
Probab=53.21 E-value=77 Score=24.65 Aligned_cols=60 Identities=8% Similarity=0.194 Sum_probs=46.6
Q ss_pred cceeEEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCc---ccccCCCCCCCCCCcEEEEEecCCCc
Q 030680 75 PTFAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGN---LYKRNFGTDLDKATNELVLRLQPDEA 145 (173)
Q Consensus 75 eTfaA~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~---~f~~~~~~~~~~~~N~Lvi~iqP~e~ 145 (173)
.-|.|+.+.|++.. |..|.+|.-+.|...-+..+++.... .|. .....+.|+|.+.-+..
T Consensus 5 ~eY~a~~f~l~~~~-----~~~R~AK~TP~K~G~FVt~Wkr~~~g~~~Pf~------~~d~~d~liI~v~d~~~ 67 (123)
T PF08877_consen 5 SEYEACTFKLNGKT-----IRFRLAKKTPKKPGQFVTFWKRDENGKNQPFD------EEDSFDFLIINVIDGDR 67 (123)
T ss_pred cccceEEEEECCcE-----EEEEecccCCCcccEEEEEEEECCCCCccCCc------cccCCCEEEEEEEeCCc
Confidence 46899999999988 78999999999999999999876432 332 22357889998876553
No 14
>PF14345 GDYXXLXY: GDYXXLXY protein
Probab=51.89 E-value=47 Score=25.53 Aligned_cols=17 Identities=18% Similarity=0.309 Sum_probs=15.4
Q ss_pred cccCCCcCceeeccccc
Q 030680 35 PMQQLLLEDVIVGQYKG 51 (173)
Q Consensus 35 sl~~~~~~~~vrGQY~~ 51 (173)
.+.|+||.+..||.|..
T Consensus 26 ~~~PvDPRdllrGdYv~ 42 (144)
T PF14345_consen 26 KTAPVDPRDLLRGDYVA 42 (144)
T ss_pred EecccCcccccccceEE
Confidence 67899999999999976
No 15
>TIGR03159 cas_Csc1 CRISPR-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.
Probab=48.34 E-value=15 Score=31.33 Aligned_cols=42 Identities=14% Similarity=0.260 Sum_probs=30.0
Q ss_pred CCCCCCcCCCCCCCCCCccceeEEeeeeecCCcCCCceEEeccccCc
Q 030680 57 KSYPAYIDDPTVPKDSLTPTFAAAALFINNARWDGVPFLMKAGKALH 103 (173)
Q Consensus 57 ~~~~gY~~e~gV~~~S~TeTfaA~~l~Idn~RW~GVPfylrtGK~L~ 103 (173)
+..|.|--...++++|.-+||+--. ..=-..|.|||=||.+.
T Consensus 110 ~n~pnfgr~k~iapGs~F~~~V~~s-----~~~~~LP~~IRLGKk~s 151 (223)
T TIGR03159 110 KNYPNFGRAKEIAPGNKFYFYVFTD-----QGEEKLPVYIRLGKKRS 151 (223)
T ss_pred ccCCccceeeeeccCCEEEEEEEec-----CCCCCCchheEecccee
Confidence 3556777777899999999998621 11124699999999763
No 16
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]
Probab=47.54 E-value=11 Score=37.78 Aligned_cols=40 Identities=25% Similarity=0.444 Sum_probs=29.1
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccc
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKG 51 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~ 51 (173)
+|+|||++||.++|-+= -+.||+-+-+-++ .++|||-|.+
T Consensus 312 ~ss~ll~~Lc~il~~~~---vp~dIltesiitv--------AevVRgn~~n 351 (970)
T KOG0946|consen 312 VSSHLLDVLCTILMHPG---VPADILTESIITV--------AEVVRGNARN 351 (970)
T ss_pred HHcchHHHHHHHHcCCC---CcHhHHHHHHHHH--------HHHHHhchHH
Confidence 48999999999999873 2455655544433 5789998875
No 17
>PF07157 DNA_circ_N: DNA circularisation protein N-terminus; InterPro: IPR009826 This entry represents the N terminus (approximately 100 residues) of a number of phage DNA circulation proteins.
Probab=47.04 E-value=16 Score=27.04 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=12.8
Q ss_pred CCcCCCceEEeccccC
Q 030680 87 ARWDGVPFLMKAGKAL 102 (173)
Q Consensus 87 ~RW~GVPfylrtGK~L 102 (173)
-.|+||||.+.+-..=
T Consensus 8 ASfRGVpF~v~~~~~~ 23 (93)
T PF07157_consen 8 ASFRGVPFDVESTDDS 23 (93)
T ss_pred ceECCeeEEEEEcccC
Confidence 4699999999887733
No 18
>PF15069 FAM163: FAM163 family
Probab=46.46 E-value=30 Score=27.67 Aligned_cols=31 Identities=19% Similarity=0.161 Sum_probs=21.4
Q ss_pred CcCCCCCCCCCCccceeEEeeeeecCCcCCC
Q 030680 62 YIDDPTVPKDSLTPTFAAAALFINNARWDGV 92 (173)
Q Consensus 62 Y~~e~gV~~~S~TeTfaA~~l~Idn~RW~GV 92 (173)
|.+|++.+..|.+++.-+..-.++.+.|...
T Consensus 48 ~eee~d~~~~~~~p~~~~~~~~~~~~~l~p~ 78 (143)
T PF15069_consen 48 EEEEPDFAAHSHTPPCNANSPQANGPSLAPP 78 (143)
T ss_pred cccCCCCCCCCCCCCcccccCcCCCCCCCCC
Confidence 4556667777777777777766677777654
No 19
>COG5649 Uncharacterized conserved protein [Function unknown]
Probab=46.15 E-value=6.6 Score=30.56 Aligned_cols=29 Identities=21% Similarity=0.619 Sum_probs=19.7
Q ss_pred eecCCcCCCceE-----EeccccCcceeeEEEEEeec
Q 030680 84 INNARWDGVPFL-----MKAGKALHTKRAEIRVQFRH 115 (173)
Q Consensus 84 Idn~RW~GVPfy-----lrtGK~L~~k~teI~i~Fk~ 115 (173)
+..|.|+|+||| +.||..+ ...|.++|-+
T Consensus 48 ~e~vKWrg~Pvweh~g~ictge~y---k~vvK~tFak 81 (132)
T COG5649 48 HEAVKWRGSPVWEHDGWICTGECY---KGVVKVTFAK 81 (132)
T ss_pred hheeeecCcccccCCceEEeeeee---eeEEEEEEec
Confidence 345789999998 5555544 3567777754
No 20
>TIGR00156 conserved hypothetical protein TIGR00156. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae.
Probab=45.45 E-value=9.2 Score=29.80 Aligned_cols=15 Identities=27% Similarity=0.547 Sum_probs=14.3
Q ss_pred EeeeeecCCcCCCce
Q 030680 80 AALFINNARWDGVPF 94 (173)
Q Consensus 80 ~~l~Idn~RW~GVPf 94 (173)
++++||+.+|.|.|+
T Consensus 84 I~VeId~~~w~G~~v 98 (126)
T TIGR00156 84 INVVIPAAVWNGREV 98 (126)
T ss_pred EEEEECHHHcCCCcC
Confidence 899999999999987
No 21
>PRK10053 hypothetical protein; Provisional
Probab=38.48 E-value=14 Score=28.94 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=14.7
Q ss_pred EEeeeeecCCcCCCce
Q 030680 79 AAALFINNARWDGVPF 94 (173)
Q Consensus 79 A~~l~Idn~RW~GVPf 94 (173)
.+.+.||+.+|.|.|+
T Consensus 87 ~I~VeID~~~w~G~~v 102 (130)
T PRK10053 87 EINVIIPAAVFDGREV 102 (130)
T ss_pred cEEEEeCHHHcCCCcC
Confidence 4899999999999988
No 22
>COG3564 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=35.05 E-value=33 Score=26.07 Aligned_cols=33 Identities=18% Similarity=0.349 Sum_probs=23.9
Q ss_pred CCCceEEeccccCcceeeEEEEEeecCCCcccc
Q 030680 90 DGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYK 122 (173)
Q Consensus 90 ~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~ 122 (173)
.||||||-.-.--.=|.|+..|-.-+--..+|+
T Consensus 62 ~gvPvyIs~~QyeaWKHTqLIIDVVpGRGGmFS 94 (116)
T COG3564 62 DGVPVYISGPQYEAWKHTQLIIDVVPGRGGMFS 94 (116)
T ss_pred CCEEEEecCcHHhhhhccEEEEEEecCCCceeE
Confidence 499999987776677788877776544445664
No 23
>PF01474 DAHP_synth_2: Class-II DAHP synthetase family; InterPro: IPR002480 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family (2.5.1.54 from EC) catalyse the first step in aromatic amino acid biosynthesis from chorismate. Class I (see IPR006218 from INTERPRO) includes bacterial and yeast enzymes; class II includes higher plants and various microorganisms []. The first step in the common pathway leading to the biosynthesis of aromatic compounds is the stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP). This reaction is catalyzed by DAHP synthase, a metal-activated enzyme, which in microorganisms is the target for negative-feedback regulation by pathway intermediates or by end products.; GO: 0003849 3-deoxy-7-phosphoheptulonate synthase activity, 0009073 aromatic amino acid family biosynthetic process; PDB: 3NUD_A 3KGF_A 2W19_A 3NUE_B 3PFP_A 2B7O_B 3RZI_A 3NV8_B 2W1A_A.
Probab=27.81 E-value=61 Score=30.34 Aligned_cols=55 Identities=31% Similarity=0.405 Sum_probs=26.5
Q ss_pred CCCCCCChHHHHHHHHHHhccccCC-Cc---Cce-----eecccccc------CCCCCCCCCCcCCCCCCCC
Q 030680 15 ETPVSLDAEDIRNEKVKVLRPMQQL-LL---EDV-----IVGQYKGH------NKGSKSYPAYIDDPTVPKD 71 (173)
Q Consensus 15 E~P~s~~~~~ir~eKvkvL~sl~~~-~~---~~~-----vrGQY~~g------~~~~~~~~gY~~e~gV~~~ 71 (173)
|....++++.|++ |+++|.++.-+ .. ..+ +-|||..- +++|..+|+||-+. |+.-
T Consensus 68 EsF~e~~~~~I~~-k~~~Llqma~vL~~~~~~PVVrVGRiAGQyAKPRS~~~E~vdG~~LPsyRGD~-VN~~ 137 (439)
T PF01474_consen 68 ESFAECTADHIRD-KFKLLLQMALVLTYGAGKPVVRVGRIAGQYAKPRSSPTETVDGVELPSYRGDI-VNGP 137 (439)
T ss_dssp --STT-SHHHHHH-HHHHHHHHHHHHHHHHTS-EEEEEEBSS------S-SB----TTSSB----TT-TS-S
T ss_pred cChhhcChHHHHH-HHHHHHHHHHHHHhccCCCeEEechhhhcccCCCCCCccCCCCccCccccccc-ccCC
Confidence 7888889999986 99999887542 11 113 44999762 24778899999775 5433
No 24
>KOG3997 consensus Major apurinic/apyrimidinic endonuclease/3'-repair diesterase APN1 [Replication, recombination and repair]
Probab=26.79 E-value=15 Score=31.94 Aligned_cols=22 Identities=36% Similarity=0.741 Sum_probs=19.2
Q ss_pred eEEeeeeecCCcCCCceEEecc
Q 030680 78 AAAALFINNARWDGVPFLMKAG 99 (173)
Q Consensus 78 aA~~l~Idn~RW~GVPfylrtG 99 (173)
.|.++-.++.||.|+|.+|-|-
T Consensus 242 ~~Frlimn~~~~dgIPliLETP 263 (281)
T KOG3997|consen 242 AAFRLIMNDNRLDGIPLILETP 263 (281)
T ss_pred HHHHHHhccccccCcceEEeCC
Confidence 4678889999999999999874
No 25
>PRK13245 hetR heterocyst differentiation control protein; Reviewed
Probab=25.58 E-value=30 Score=30.10 Aligned_cols=21 Identities=24% Similarity=0.700 Sum_probs=16.4
Q ss_pred eeEEeeeeecCCcCCCceEEecc
Q 030680 77 FAAAALFINNARWDGVPFLMKAG 99 (173)
Q Consensus 77 faA~~l~Idn~RW~GVPfylrtG 99 (173)
|+.-...||++ | |.|||.-|-
T Consensus 192 ysgTVtrid~p-w-GmPfYaLtr 212 (299)
T PRK13245 192 YSGTVTRIDSP-W-GMPFYALTR 212 (299)
T ss_pred hccceeeccCC-C-CCchhheec
Confidence 56667788887 6 999998764
No 26
>COG0147 TrpE Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=25.54 E-value=20 Score=33.33 Aligned_cols=54 Identities=22% Similarity=0.268 Sum_probs=34.8
Q ss_pred HHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEEe-eeeecCCcCCCceEEecccc
Q 030680 29 KVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAAA-LFINNARWDGVPFLMKAGKA 101 (173)
Q Consensus 29 KvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~~-l~Idn~RW~GVPfylrtGK~ 101 (173)
|++.++-|..+ +..-||=|.++ .||..-.| +.+|-+++| ++++|.+ +++++|=+
T Consensus 375 K~rAMeiI~el--E~~~RG~Y~Ga-------vGy~~~~G-----~~d~~I~IRT~~~~~~~-----~~~~aGaG 429 (462)
T COG0147 375 KVRAMEIIEEL--EPSPRGIYGGA-------VGYLSFNG-----DLDFAIAIRTAELKDGR-----AYVQAGAG 429 (462)
T ss_pred HHHHHHHHHHh--cCCCCccceee-------EEEEeCCC-----CceeeeEeeEEEEECCE-----EEEEeceE
Confidence 55544444333 44678999744 48988876 456777776 4555655 78888854
No 27
>PF04076 BOF: Bacterial OB fold (BOF) protein; InterPro: IPR005220 Proteins in this entry have an OB-fold fold (oligonucleotide/oligosaccharide binding motif). Analysis of the predicted nucleotide-binding site of the OB-fold suggests that they lack nucleic acid-binding properties. They contain an predicted N-terminal signal peptide which indicates that they localise to the periplasm where they may function to bind proteins, small molecules, or other typical OB-fold ligands. As hypothesised for the distantly related OB-fold containing bacterial enterotoxins, the loss of nucleotide-binding function and the rapid evolution of the OB-fold ligand-binding site may be associated with the presence of members in mobile genetic elements and their potential role in bacterial pathogenicity [].; PDB: 1NNX_A.
Probab=22.54 E-value=46 Score=24.83 Aligned_cols=16 Identities=19% Similarity=0.468 Sum_probs=10.4
Q ss_pred EEeeeeecCCcCCCce
Q 030680 79 AAALFINNARWDGVPF 94 (173)
Q Consensus 79 A~~l~Idn~RW~GVPf 94 (173)
.++++||+..|.|.++
T Consensus 60 ~I~VeId~~~w~g~~v 75 (103)
T PF04076_consen 60 EIEVEIDDDVWRGQTV 75 (103)
T ss_dssp EEEEE--GGGSTT---
T ss_pred cEEEEEChhhcCCccc
Confidence 6899999999999876
No 28
>TIGR01358 DAHP_synth_II 3-deoxy-7-phosphoheptulonate synthase, class II. Homologs scoring between trusted and noise cutoff include proteins involved in antibiotic biosynthesis; one example is active as this enzyme, while another acts on an amino analog.
Probab=20.99 E-value=1.3e+02 Score=28.19 Aligned_cols=51 Identities=31% Similarity=0.444 Sum_probs=34.9
Q ss_pred CCCCCCChHHHHHHHHHHhccccCC-Cc---Cce-----eecccccc------CCCCCCCCCCcCCC
Q 030680 15 ETPVSLDAEDIRNEKVKVLRPMQQL-LL---EDV-----IVGQYKGH------NKGSKSYPAYIDDP 66 (173)
Q Consensus 15 E~P~s~~~~~ir~eKvkvL~sl~~~-~~---~~~-----vrGQY~~g------~~~~~~~~gY~~e~ 66 (173)
|....++++.|| .|+++|-.+.-+ .- -.+ +-|||..- +++|...|+||-+.
T Consensus 67 E~F~~~~~~~i~-~k~~~llqMa~vl~~~~~~PVVkVGRiAGQyAKPRS~~~E~~~G~~LPsYRGD~ 132 (443)
T TIGR01358 67 ESFKDCTADHIR-NKLRVLLQMAVVLTYGASLPVVKVGRIAGQYAKPRSAPTETRDGVTLPSYRGDI 132 (443)
T ss_pred CchhhcCHHHHH-HHHHHHHHHHHHHhhcCCCCeEEecccccccCCCCCCCcccCCCEeccccCCcc
Confidence 777788888886 689988776442 11 123 45999763 25677889999764
No 29
>PF08381 BRX: Transcription factor regulating root and shoot growth via Pin3; InterPro: IPR013591 This is a short domain, approximately 35 residues in length that is found near the C terminus in a number of plant proteins, being repeated in some members. It is found in Brevis radix-like proteins. These may act as a regulator of cell proliferation and elongation in the root []. It is also found in proteins annotated as involved in disease resistance and in the regulation of chromosome condensation, which also contain other domains with varied functions, such as TIR (IPR000157 from INTERPRO) and FYVE (IPR000306 from INTERPRO) respectively.
Probab=20.42 E-value=1.6e+02 Score=20.11 Aligned_cols=25 Identities=24% Similarity=0.470 Sum_probs=17.2
Q ss_pred cCCCcEEEEEEecCCCCCCceeEEee
Q 030680 141 QPDEAIYLKINNKVPGLGMRLDRSDL 166 (173)
Q Consensus 141 qP~e~i~l~~~~K~pG~~~~~~~~~l 166 (173)
|+++||++.+.+- ||-+-.++.+..
T Consensus 9 q~EpGVyiTl~~~-p~G~~~LkRVRF 33 (59)
T PF08381_consen 9 QDEPGVYITLVSL-PDGGNDLKRVRF 33 (59)
T ss_pred eeCCeeEEEEEEC-CCCCeeEEEEEE
Confidence 4555888888877 655666777654
Done!