Query 030680
Match_columns 173
No_of_seqs 138 out of 1045
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 04:08:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030680.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030680hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bh9_A G6PD, glucose-6-phospha 100.0 2E-71 6.9E-76 504.7 20.9 166 1-172 234-400 (489)
2 4e9i_A Glucose-6-phosphate 1-d 100.0 3.3E-70 1.1E-74 501.2 20.1 162 1-171 292-453 (541)
3 1dpg_A G6PD, glucose 6-phospha 100.0 7E-70 2.4E-74 494.4 19.6 165 1-172 237-405 (485)
4 1nnx_A Protein YGIW; structura 39.5 10 0.00036 27.6 1.2 16 79-94 63-78 (109)
5 4gow_A Potassium voltage-gated 30.8 13 0.00044 25.3 0.4 25 28-53 24-48 (72)
6 3jzv_A Uncharacterized protein 22.1 79 0.0027 23.7 3.6 32 82-113 14-46 (166)
7 3qoe_A Heterocyst differentiat 20.3 19 0.00065 30.1 -0.3 21 77-99 195-215 (302)
8 3ktp_B Trinucleotide repeat-co 18.5 27 0.00091 18.7 0.1 8 88-95 15-22 (22)
9 4gyw_A UDP-N-acetylglucosamine 18.0 27 0.00093 32.4 0.1 31 77-107 597-638 (723)
10 2hx6_A Ribonuclease, GP61.9; a 17.6 59 0.002 25.0 1.9 22 1-22 70-91 (153)
No 1
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=100.00 E-value=2e-71 Score=504.72 Aligned_cols=166 Identities=48% Similarity=0.887 Sum_probs=159.5
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCC-CCCCCCCcCCCCCCCCCCccceeE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKG-SKSYPAYIDDPTVPKDSLTPTFAA 79 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~-~~~~~gY~~e~gV~~~S~TeTfaA 79 (173)
|||||||||||+|||||+++++++||+||+||||||+|++++++|||||.+|..+ |+.++||+||+||+++|+||||||
T Consensus 234 vQNHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~~VrGQY~~g~~~~g~~v~gY~~E~~V~~~S~TeTfaA 313 (489)
T 2bh9_A 234 MQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAA 313 (489)
T ss_dssp TTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCGGGEEEEEEECCTTSCSTTSSCGGGCTTSCTTCCCCSEEE
T ss_pred HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhccCCCCccCeEEecccCCcCCCCCCCCCcccCCCCCCCCCCcceEE
Confidence 7999999999999999999999999999999999999999999999999999776 789999999999999999999999
Q ss_pred EeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCC
Q 030680 80 AALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGM 159 (173)
Q Consensus 80 ~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~ 159 (173)
++|+||||||+||||||||||+|++|.|||+|+||++|+.+|... ..+|+|+|+|||+|+|+|+|++|.||.++
T Consensus 314 ~kl~IdN~RW~GVPFylRtGKrL~~r~teI~I~Fk~~p~~~f~~~------~~~N~LviriqP~e~i~l~~~~K~PG~~~ 387 (489)
T 2bh9_A 314 VVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQ------CKRNELVIRVQPNEAVYTKMMTKKPGMFF 387 (489)
T ss_dssp EEEEBCSTTTTTCEEEEEEESSCSSCEEEEEEEECCCSSCCSTTC------CCCCEEEEEEESSCEEEEEEEEECTTTCC
T ss_pred EEEEEcCcCcCCCCEEEEcCCCCCcceEEEEEEecCCChhhcccC------CCCCEEEEEeCCCCeEEEEEeccCCCCCC
Confidence 999999999999999999999999999999999999999999532 25899999999999999999999999999
Q ss_pred ceeEEeeeeeecC
Q 030680 160 RLDRSDLNLLYRS 172 (173)
Q Consensus 160 ~~~~~~l~~~~~~ 172 (173)
.+++++|+|+|..
T Consensus 388 ~~~~~~ld~~~~~ 400 (489)
T 2bh9_A 388 NPEESELDLTYGN 400 (489)
T ss_dssp SEEEEEEEEETTT
T ss_pred cceeeeEEEechh
Confidence 9999999999964
No 2
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A*
Probab=100.00 E-value=3.3e-70 Score=501.24 Aligned_cols=162 Identities=48% Similarity=0.799 Sum_probs=155.8
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCcCceeeccccccCCCCCCCCCCcCCCCCCCCCCccceeEE
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLLEDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPTFAAA 80 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeTfaA~ 80 (173)
|||||||||||||||||+++++++|||||+||||||+|++++++|||||.+|. +| .++||+||+||+++|+||||||+
T Consensus 292 vQNHLlQlL~LvAMEpP~s~~a~~iRdEKvKVLralrpi~~~~vVrGQY~~g~-~g-~v~gY~~e~gV~~~S~TeTfaA~ 369 (541)
T 4e9i_A 292 IQNHLTQILSLLTMEKPRSLSAEDIRDEKVQVLRQVVPANPAECVLGQYTASA-DG-STPGYLDDPSVPKGSHCPTFAVL 369 (541)
T ss_dssp TTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCTTSEEEEEEECCS-SS-SSCCGGGCTTSCTTCCCCSEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHccCCCCccceEEccccCCC-CC-CCCCccCCCCCCCCCCCcccEEE
Confidence 79999999999999999999999999999999999999999999999999984 55 89999999999999999999999
Q ss_pred eeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCCCCCc
Q 030680 81 ALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPGLGMR 160 (173)
Q Consensus 81 ~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG~~~~ 160 (173)
+|+||||||+||||||||||+|+++.|||+|+||++|+.+|.. ..+|+|+|+|||+|+|+|+|++|.||.++.
T Consensus 370 kl~IdN~RW~GVPFyLRtGKrL~~r~tEI~I~FK~~p~~~F~~-------~~~N~LviriQP~E~i~l~~~~K~PG~~~~ 442 (541)
T 4e9i_A 370 RLHVNNDRWHGVPFIIRAGKALEERLLDIRIQFKDEIRPFGES-------TQRNELVIRAQPSEAMYLKLTAKTPGLLND 442 (541)
T ss_dssp EEEBCSTTTTTCEEEEEEESSBSSCEEEEEEEECCCCTTTGGG-------CCCCEEEEEEESSCEEEEEEEEECSSSCCC
T ss_pred EEEEcCcccCCCCEEEEccCCcCcceEEEEEEEecCChhhcCC-------CCCCEEEEEECCCCeEEEEEeccCCCCCCc
Confidence 9999999999999999999999999999999999999999953 158999999999999999999999999999
Q ss_pred eeEEeeeeeec
Q 030680 161 LDRSDLNLLYR 171 (173)
Q Consensus 161 ~~~~~l~~~~~ 171 (173)
+++++|+|+|.
T Consensus 443 ~~~~~Ld~~y~ 453 (541)
T 4e9i_A 443 THQTELDLTYE 453 (541)
T ss_dssp EEEEEEEEEHH
T ss_pred eeeeeeeeecc
Confidence 99999999984
No 3
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=100.00 E-value=7e-70 Score=494.44 Aligned_cols=165 Identities=29% Similarity=0.474 Sum_probs=155.5
Q ss_pred CcchHHHHHHHHhcCCCCCCChHHHHHHHHHHhccccCCCc----CceeeccccccCCCCCCCCCCcCCCCCCCCCCccc
Q 030680 1 MQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRPMQQLLL----EDVIVGQYKGHNKGSKSYPAYIDDPTVPKDSLTPT 76 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~~~ir~eKvkvL~sl~~~~~----~~~vrGQY~~g~~~~~~~~gY~~e~gV~~~S~TeT 76 (173)
|||||||||||+|||||+++++++||+||+||||||+|+++ +++|||||.+|. |+.++||+||+||+++|+|||
T Consensus 237 vQNHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~v~~~~VrGQY~~g~--g~~v~gY~eE~gV~~~S~TeT 314 (485)
T 1dpg_A 237 IQNHTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGD--SADFKPYLEELDVPADSKNNT 314 (485)
T ss_dssp TTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCHHHHHHHEEEEEECCCS--STTCCCGGGSTTCCTTCCCCS
T ss_pred HHHHHHHHHHHHHcCCccCCCHHHHHHHHHHHHhccCCCChhhhccCeEEeccCCCC--CCCCCCccCCCCCCCCCCCCc
Confidence 79999999999999999999999999999999999999987 447999999995 889999999999999999999
Q ss_pred eeEEeeeeecCCcCCCceEEeccccCcceeeEEEEEeecCCCcccccCCCCCCCCCCcEEEEEecCCCcEEEEEEecCCC
Q 030680 77 FAAAALFINNARWDGVPFLMKAGKALHTKRAEIRVQFRHVPGNLYKRNFGTDLDKATNELVLRLQPDEAIYLKINNKVPG 156 (173)
Q Consensus 77 faA~~l~Idn~RW~GVPfylrtGK~L~~k~teI~i~Fk~~p~~~f~~~~~~~~~~~~N~Lvi~iqP~e~i~l~~~~K~pG 156 (173)
|||++|+||||||+||||||||||||++|.|||+|+||++|+. |... ....+|+|+|+|||+|+|+|+|++|.||
T Consensus 315 faA~kl~IdN~RW~GVPFyLRtGKrL~~r~teI~I~Fk~~p~~-f~~~----~~~~~N~LviriqP~egi~l~~~~K~PG 389 (485)
T 1dpg_A 315 FIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN-FGSE----QEAQEAVLSIIIDPKGAIELKLNAKSVE 389 (485)
T ss_dssp EEEEEECBCSGGGTTCCEEEEEESSBSSCEEEEEEEECCCCCC-CCSS----SCCCCCEEEEEEESSCEEEEEEEEECSS
T ss_pred eEEEEEEEcCCccCCccEEEEecCCcccceEEEEEEecCCCcC-cCcc----ccCCCCEEEEEECCCCeEEEEEEecCCC
Confidence 9999999999999999999999999999999999999999999 9531 1236899999999999999999999999
Q ss_pred CCCceeEEeeeeeecC
Q 030680 157 LGMRLDRSDLNLLYRS 172 (173)
Q Consensus 157 ~~~~~~~~~l~~~~~~ 172 (173)
.++.+++++|+|+|.+
T Consensus 390 ~~~~~~~~~ld~~~~~ 405 (485)
T 1dpg_A 390 DAFNTRTIDLGWTVSD 405 (485)
T ss_dssp SSCCEEEEEEEEECCH
T ss_pred CCCceeeeeEEeeccc
Confidence 9999999999999963
No 4
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=39.50 E-value=10 Score=27.59 Aligned_cols=16 Identities=31% Similarity=0.731 Sum_probs=14.8
Q ss_pred EEeeeeecCCcCCCce
Q 030680 79 AAALFINNARWDGVPF 94 (173)
Q Consensus 79 A~~l~Idn~RW~GVPf 94 (173)
.++++||+.+|.|.|+
T Consensus 63 ~I~VeId~~~w~g~~v 78 (109)
T 1nnx_A 63 TINVDIDHKRWNGVTV 78 (109)
T ss_dssp EEEEECCGGGSTTCCC
T ss_pred cEEEEEChhhcCCccc
Confidence 5899999999999987
No 5
>4gow_A Potassium voltage-gated channel subfamily KQT MEM; protein complex, protein binding, ION channel, calmodulin, P channel; 2.60A {Homo sapiens}
Probab=30.77 E-value=13 Score=25.34 Aligned_cols=25 Identities=28% Similarity=0.377 Sum_probs=2.6
Q ss_pred HHHHHhccccCCCcCceeeccccccC
Q 030680 28 EKVKVLRPMQQLLLEDVIVGQYKGHN 53 (173)
Q Consensus 28 eKvkvL~sl~~~~~~~~vrGQY~~g~ 53 (173)
+|-|.=.+++|++..|++ -||.+|-
T Consensus 24 arrkFkealrPYDVkDVI-EQYSaGH 48 (72)
T 4gow_A 24 AKRKFKETLRPYDVKDVI-EQYSAGH 48 (72)
T ss_dssp HHHHC---------------------
T ss_pred HHHHHHHhcCcccHHHHH-HHHhhhH
Confidence 345555789998877654 8998763
No 6
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=22.10 E-value=79 Score=23.71 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=17.8
Q ss_pred eeeecCCcCCCceEEec-cccCcceeeEEEEEe
Q 030680 82 LFINNARWDGVPFLMKA-GKALHTKRAEIRVQF 113 (173)
Q Consensus 82 l~Idn~RW~GVPfylrt-GK~L~~k~teI~i~F 113 (173)
..-+.|+|++||+.+.. |...+-+...+++.+
T Consensus 14 ~~~~~~~w~~v~~~~~~~~~~~p~~gv~~r~L~ 46 (166)
T 3jzv_A 14 PFQSQYRWPGVDLLAYKEEGSAPFRSVTRQVLF 46 (166)
T ss_dssp CCCCCCCCTTSCEEECCCC-CCSCEEEEEEEEE
T ss_pred cccCCcCcccChhhhcccCCCcccCCeEEEEEE
Confidence 34478999999987643 332223334444433
No 7
>3qoe_A Heterocyst differentiation protein; MCSG, PSI biology, structural genomics, midwest center for S genomics, helix-turn-helix; 3.00A {Fischerella thermalis} PDB: 3qod_A
Probab=20.32 E-value=19 Score=30.10 Aligned_cols=21 Identities=24% Similarity=0.700 Sum_probs=15.6
Q ss_pred eeEEeeeeecCCcCCCceEEecc
Q 030680 77 FAAAALFINNARWDGVPFLMKAG 99 (173)
Q Consensus 77 faA~~l~Idn~RW~GVPfylrtG 99 (173)
|..-...||++ | |.|||.-|-
T Consensus 195 ysgTVtridsp-w-GmPfYaLtr 215 (302)
T 3qoe_A 195 YSGTVTRIDSP-W-GMPFYALTR 215 (302)
T ss_dssp TTTSCCCBCCS-S-SCCEECCCC
T ss_pred hccceEeecCC-C-CCcceeeec
Confidence 44556678886 7 999998764
No 8
>3ktp_B Trinucleotide repeat-containing gene 6C protein; protein-protein complex, methylation, mRNA processing, mRNA nucleus, phosphoprotein, RNA-binding; 1.50A {Homo sapiens}
Probab=18.47 E-value=27 Score=18.66 Aligned_cols=8 Identities=25% Similarity=0.904 Sum_probs=4.9
Q ss_pred CcCCCceE....
Q 030680 88 RWDGVPFL.... 95 (173)
Q Consensus 88 RW~GVPfy.... 95 (173)
-|+|++++
T Consensus 15 pwkG~~~i.... 22 (22)
T 3ktp_B 15 PWKGLQNIxxxx 26 (26)
T ss_pred cccccccC....
Confidence 37777653
No 9
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=17.99 E-value=27 Score=32.40 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=23.3
Q ss_pred eeEEeeeeecCC-----------cCCCceEEeccccCcceee
Q 030680 77 FAAAALFINNAR-----------WDGVPFLMKAGKALHTKRA 107 (173)
Q Consensus 77 faA~~l~Idn~R-----------W~GVPfylrtGK~L~~k~t 107 (173)
|..+-+++|+.- |.|||.+-+.|+.+..|.+
T Consensus 597 ~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~ 638 (723)
T 4gyw_A 597 GQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVA 638 (723)
T ss_dssp GGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHH
T ss_pred hCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHH
Confidence 334566677655 7789999999999887754
No 10
>2hx6_A Ribonuclease, GP61.9; alpha/beta fold, hydrolase; NMR {Enterobacteria phage T4}
Probab=17.61 E-value=59 Score=24.98 Aligned_cols=22 Identities=18% Similarity=0.517 Sum_probs=18.0
Q ss_pred CcchHHHHHHHHhcCCCCCCCh
Q 030680 1 MQNHLLQILALFAMETPVSLDA 22 (173)
Q Consensus 1 vQNHLlQlL~lvaME~P~s~~~ 22 (173)
+-||+.++-.++-|++|...++
T Consensus 70 i~~hv~Ei~efl~mp~~P~~d~ 91 (153)
T 2hx6_A 70 IKDHVLEVNEFLSMPPRPDIDE 91 (153)
T ss_dssp GGGGHHHHHHHHSSSCSCSSSS
T ss_pred HhhhHHHHHHHHcCCCCCCchh
Confidence 4589999999999998866554
Done!