BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 030687
(173 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q0WQN9|CCD42_ARATH Cyclin-D4-2 OS=Arabidopsis thaliana GN=CYCD4-2 PE=1 SV=2
Length = 298
Score = 155 bits (393), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 98/129 (75%), Gaps = 3/129 (2%)
Query: 45 QDSNFINKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREA 104
+ SN ++ RSIF MGF P + SEE++REM KE + P+ DYL RLR+GDLD VR +A
Sbjct: 16 EKSNSVDTRSIFQMGF-PLE--SEEIVREMIEKERQHSPRDDYLKRLRNGDLDFNVRIQA 72
Query: 105 LDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESE 164
L WI KA +FGP+ CL+MNYLDRFLSV++LP GK WTVQLL VACLSLAAK+EE+
Sbjct: 73 LGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETN 132
Query: 165 VPLLVELQV 173
VP L++LQV
Sbjct: 133 VPELMQLQV 141
>sp|P42752|CCD21_ARATH Cyclin-D2-1 OS=Arabidopsis thaliana GN=CYCD2-1 PE=1 SV=3
Length = 361
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/137 (57%), Positives = 97/137 (70%), Gaps = 1/137 (0%)
Query: 37 DQNSQNHSQDSNFINKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDL 96
D N Q ++D NF SI PM ++SE+ ++EM V+E E P DY+ RL SGDL
Sbjct: 34 DYNHQLFAKDDNFGGNGSI-PMMGSSSSSLSEDRIKEMLVREIEFCPGTDYVKRLLSGDL 92
Query: 97 DSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSL 156
D VR +ALDWILK AHY FG + CLSMNYLDRFL+ YELPK KDW QLL V+CLSL
Sbjct: 93 DLSVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSL 152
Query: 157 AAKMEESEVPLLVELQV 173
A+KMEE++VP +V+LQV
Sbjct: 153 ASKMEETDVPHIVDLQV 169
>sp|Q8LGA1|CCD41_ARATH Cyclin-D4-1 OS=Arabidopsis thaliana GN=CYCD4-1 PE=1 SV=2
Length = 308
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/121 (62%), Positives = 95/121 (78%), Gaps = 3/121 (2%)
Query: 54 SIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRV-RREALDWILKAH 112
SI MGF Q+ SEE++ EM KE + LP DY+ RLRSGDLD V RR+AL+WI KA
Sbjct: 32 SIPQMGFS--QSESEEIIMEMVEKEKQHLPSDDYIKRLRSGDLDLNVGRRDALNWIWKAC 89
Query: 113 AHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQ 172
++FGP+ FCL+MNYLDRFLSV++LP GK W +QLL VACLSLAAK+EE+EVP+L++LQ
Sbjct: 90 EVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQ 149
Query: 173 V 173
V
Sbjct: 150 V 150
>sp|Q6YXH8|CCD41_ORYSJ Cyclin-D4-1 OS=Oryza sativa subsp. japonica GN=CYCD4-1 PE=2 SV=2
Length = 356
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 63 FQTVSEELLREMAVKEGELLPKHDYLNRLRSG----DLDSRVRREALDWILKAHAHYRFG 118
F SEE + + E + +P+ DY RLR+G DLD RVR +A+DWI K H++Y F
Sbjct: 61 FAVPSEECVARLVETEADHMPREDYAERLRAGGGDGDLDLRVRMDAIDWIWKVHSYYSFA 120
Query: 119 PMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
P++ CL++NYLDRFLS+Y+LP GKDW QLL VACLSLAAKMEE++VP ++LQV
Sbjct: 121 PLTACLAVNYLDRFLSLYQLPDGKDWMTQLLAVACLSLAAKMEETDVPQSLDLQV 175
>sp|Q4KYM5|CCD42_ORYSJ Cyclin-D4-2 OS=Oryza sativa subsp. japonica GN=CYCD4-2 PE=2 SV=2
Length = 383
Score = 119 bits (299), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 81/116 (69%), Gaps = 4/116 (3%)
Query: 60 FFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSG--DLDSRVRREALDWILKAHAHYRF 117
FP Q SEE + + +E +P+ DY RLR G D+D RVR EA+ WI + + +Y F
Sbjct: 69 MFPRQ--SEECVASLVEREQAHMPRADYGERLRGGGGDVDLRVRSEAIGWIWEVYTYYNF 126
Query: 118 GPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
++ L++NYLDRFLS YELP+G+DW QLL+VACLS+AAKMEE+ VP ++LQ+
Sbjct: 127 SSVTAYLAVNYLDRFLSQYELPEGRDWMTQLLSVACLSIAAKMEETVVPQCLDLQI 182
>sp|Q8LHA8|CCD22_ORYSJ Cyclin-D2-2 OS=Oryza sativa subsp. japonica GN=CYCD2-2 PE=2 SV=1
Length = 356
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%)
Query: 63 FQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSF 122
F S+E + + KE + P+ YL +L G L+ R++A+DWI K H++Y FGP+S
Sbjct: 57 FPIDSDEFVALLVEKEMDHQPQRGYLEKLELGGLECSWRKDAIDWICKVHSYYNFGPLSL 116
Query: 123 CLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
L++NYLDRFLS + LP + W QLL+V+CLSLA KMEE+ VPL ++LQV
Sbjct: 117 YLAVNYLDRFLSSFNLPHDESWMQQLLSVSCLSLATKMEETVVPLPMDLQV 167
>sp|Q0J233|CCD21_ORYSJ Cyclin-D2-1 OS=Oryza sativa subsp. japonica GN=CYCD2-1 PE=3 SV=2
Length = 308
Score = 109 bits (273), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 72/103 (69%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
+ E+ E E P+ DY +RLRS +D R E++ WILK + F P++ L++NY+D
Sbjct: 52 IAELIGGEAEYSPRSDYPDRLRSRSIDPAARAESVSWILKVQEYNGFLPLTAYLAVNYMD 111
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
RFLS+ LP+G+ W +QLL VACLSLAAKMEE+ VP L++LQV
Sbjct: 112 RFLSLRHLPEGQGWAMQLLAVACLSLAAKMEETLVPSLLDLQV 154
>sp|P42751|CCD11_ARATH Cyclin-D1-1 OS=Arabidopsis thaliana GN=CYCD1-1 PE=1 SV=3
Length = 339
Score = 104 bits (260), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%)
Query: 78 EGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYE 137
E +P HDYL+R ++ LD+ R +++ WILK A+Y F P++ L++NY+DRFL
Sbjct: 59 ERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARR 118
Query: 138 LPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
LP+ W +QLL VACLSLAAKMEE VP L + QV
Sbjct: 119 LPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQV 154
>sp|Q69QB8|CCD31_ORYSJ Cyclin-D3-1 OS=Oryza sativa subsp. japonica GN=CYCD3-1 PE=2 SV=2
Length = 342
Score = 99.8 bits (247), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 95/171 (55%), Gaps = 18/171 (10%)
Query: 7 DFTASNLTCTESTNTCFDGFDCNATNGDDDDQNSQNHSQDSNFINKRSIFPMGFFPFQTV 66
DF AS L C E D G++ ++ S D++ + FP+
Sbjct: 6 DFAASILLCAEDNTAILD-------LGEESEEISWVVGVDASLGDLSMDFPLQ------- 51
Query: 67 SEELLREM-AVKEGELLPKHDYLNRL--RSGDLD-SRVRREALDWILKAHAHYRFGPMSF 122
S++ + + +E + +P YL RL + LD VR +A+DWI K H Y+FGP++
Sbjct: 52 SDDCIEALLGREEQQHIPMEGYLQRLLLQPDGLDLVAVRSDAIDWIWKVHELYKFGPLTA 111
Query: 123 CLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
LS+NYLDRFLSV++LP+ + QLL VA LSLAAKMEE+ VP ++LQV
Sbjct: 112 VLSVNYLDRFLSVFDLPQEEACMTQLLAVASLSLAAKMEETVVPHPLDLQV 162
>sp|Q10K98|CCD23_ORYSJ Putative cyclin-D2-3 OS=Oryza sativa subsp. japonica GN=CYCD2-3
PE=3 SV=1
Length = 405
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 60/92 (65%), Gaps = 2/92 (2%)
Query: 84 KHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKD 143
+ +YL +L +G ++ R A+DWI K A+Y FGP+ L++NYLDRFLS E D
Sbjct: 87 RGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTND 146
Query: 144 --WTVQLLTVACLSLAAKMEESEVPLLVELQV 173
W QLL VACLSLAAKMEE+ P ++LQV
Sbjct: 147 MPWMQQLLIVACLSLAAKMEETAAPGTLDLQV 178
>sp|P42753|CCD31_ARATH Cyclin-D3-1 OS=Arabidopsis thaliana GN=CYCD3-1 PE=1 SV=3
Length = 376
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 57/73 (78%)
Query: 101 RREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKM 160
R+EA+ WIL+ +AHY F ++ L++ YLD+F+ Y L + K W +QL++VACLSLAAK+
Sbjct: 87 RKEAVGWILRVNAHYGFSTLAAVLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKV 146
Query: 161 EESEVPLLVELQV 173
EE++VPLL++ QV
Sbjct: 147 EETQVPLLLDFQV 159
>sp|Q8H339|CCD12_ORYSJ Cyclin-D1-2 OS=Oryza sativa subsp. japonica GN=CYCD1-2 PE=3 SV=2
Length = 354
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 83 PKHDYLNRLRSG-DLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKG 141
P+ DY RLRSG D R +++ WILK Y P++ L+++Y+DRFLS++ LP G
Sbjct: 97 PRADYPGRLRSGRPADLAARADSVAWILKVRELYGMLPVTAYLAVSYMDRFLSLHRLP-G 155
Query: 142 KDWTVQLLTVACLSLAAKMEESEVPLLVELQV 173
W +QLL V CLSLAAKMEE+ VP +++LQ+
Sbjct: 156 NGWAMQLLAVTCLSLAAKMEETLVPSILDLQM 187
>sp|Q9FGQ7|CCD32_ARATH Cyclin-D3-2 OS=Arabidopsis thaliana GN=CYCD3-2 PE=2 SV=1
Length = 367
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 101 RREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKM 160
R+EALDW+L+ +HY F ++ L++NY DRF++ +L K W QL+ VA LSLAAK+
Sbjct: 96 RKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDKPWMSQLVAVASLSLAAKV 155
Query: 161 EESEVPLLVELQV 173
EE +VPLL++LQV
Sbjct: 156 EEIQVPLLLDLQV 168
>sp|Q9SN11|CCD33_ARATH Cyclin-D3-3 OS=Arabidopsis thaliana GN=CYCD3-3 PE=2 SV=1
Length = 361
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 101 RREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKM 160
R +ALDWI K +HY F ++ L++NY DRF++ + K W QL +ACLSLAAK+
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 161 EESEVPLLVELQV 173
EE VP L++ QV
Sbjct: 146 EEIRVPFLLDFQV 158
>sp|Q67V81|CCD11_ORYSJ Cyclin-D1-1 OS=Oryza sativa subsp. japonica GN=CYCD1-1 PE=3 SV=1
Length = 363
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 103 EALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEE 162
E++ WILK + + F P + L+++Y+DRF+S LP W QLL VACLSLAAKMEE
Sbjct: 127 ESVSWILKVRSVHGFQPATAYLAVSYMDRFMSSRSLPD-HGWASQLLCVACLSLAAKMEE 185
Query: 163 SEVPLLVELQV 173
S P L++LQ+
Sbjct: 186 SSAPPLLDLQI 196
>sp|Q10QA2|CCD53_ORYSJ Cyclin-D5-3 OS=Oryza sativa subsp. japonica GN=CYCD5-3 PE=2 SV=1
Length = 345
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 49/74 (66%)
Query: 100 VRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAK 159
R + WI+K +A +RF + +++ YLDRFL+ + + K+W +QLL+VACLSLAAK
Sbjct: 99 ARAWCVGWIVKTNAGFRFSLKTAYVAVTYLDRFLARRCVDRDKEWALQLLSVACLSLAAK 158
Query: 160 MEESEVPLLVELQV 173
+EE P L E ++
Sbjct: 159 VEERRPPRLPEFKL 172
>sp|Q9C6Y3|CCA11_ARATH Cyclin-A1-1 OS=Arabidopsis thaliana GN=CYCA1-1 PE=1 SV=1
Length = 460
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 65 TVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCL 124
T + ++ + + E + P DY+ R++ D++S +R +DW+++ YR P + L
Sbjct: 193 TFACDIYKHLRASEAKKRPDVDYMERVQ-KDVNSSMRGILVDWLIEVSEEYRLVPETLYL 251
Query: 125 SMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
++NY+DR+LS + + K +QLL VAC+ +AAK EE P + E
Sbjct: 252 TVNYIDRYLSGNVISRQK---LQLLGVACMMIAAKYEEICAPQVEEF 295
>sp|P51986|CCNA_HYDVD G2/mitotic-specific cyclin-A (Fragment) OS=Hydra viridissima PE=2
SV=1
Length = 420
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 78 EGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYE 137
E + PK +Y+ + D++S +R +DW+++ Y+ P + LS++Y+DRFLS
Sbjct: 177 EAKYRPKSNYMRK--QTDINSSMRAILIDWLVEVSEEYKLIPQTLYLSVSYIDRFLSHMS 234
Query: 138 LPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
+ +GK +QL+ AC+ +AAK EE P + E
Sbjct: 235 VLRGK---LQLVGAACMLVAAKFEEIYPPEVAEF 265
>sp|Q0DJR9|CCA14_ORYSJ Cyclin-A1-4 OS=Oryza sativa subsp. japonica GN=CYCA1-4 PE=2 SV=2
Length = 356
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 65 TVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCL 124
T++ ++ + + V E + P D++ ++ ++D+ +R +DW+++ YR P + L
Sbjct: 83 TLAFDIYKHLRVAETKKRPSTDFVETIQK-NIDTSMRAVLIDWLVEVTEEYRLVPETLYL 141
Query: 125 SMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
++NY+DR+LS + + K +QLL VACL +A+K EE P + EL
Sbjct: 142 TVNYIDRYLSSKVINRRK---MQLLGVACLLIASKYEEICPPQVEEL 185
>sp|P32943|CGS6_YEAST S-phase entry cyclin-6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB6 PE=2 SV=2
Length = 380
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 10/110 (9%)
Query: 62 PFQTV--SEELLREMAVKEGELLPKHDYLNRLRSG-DLDSRVRREALDWILKAHAHYRFG 118
PF ++ + + KE ++LP H+YL +S L S +R +DW+++ H +
Sbjct: 114 PFMVAEYTDSIFSHLYEKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCL 173
Query: 119 PMSFCLSMNYLDRFLS--VYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
P + L++N LDRFLS V +L K +QLL + CL +A K EE ++P
Sbjct: 174 PETLFLAINLLDRFLSQNVVKLNK-----LQLLCITCLFIACKFEEVKLP 218
>sp|Q9FVX0|CCA12_ARATH Cyclin-A1-2 OS=Arabidopsis thaliana GN=CYCA1-2 PE=1 SV=2
Length = 442
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 69 ELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNY 128
++ + V E P DY+ R +S +++ +R +DW+++ YR P + L++NY
Sbjct: 181 DIYEHLRVSEVNKRPALDYMERTQSS-INASMRSILIDWLVEVAEEYRLSPETLYLAVNY 239
Query: 129 LDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
+DR+L+ + K +QLL V C+ +AAK EE VP
Sbjct: 240 VDRYLTGNAINKQ---NLQLLGVTCMMIAAKYEEVCVP 274
>sp|P30283|CGS5_YEAST S-phase entry cyclin-5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CLB5 PE=1 SV=1
Length = 435
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 67 SEELLREMAVKEGELLPKHDYL-NRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLS 125
S E+ + +E E LP H+YL ++ L +R +DW+++ H ++ P + LS
Sbjct: 163 SAEIFAFLYRRELETLPSHNYLLDKTSKYYLRPSMRTILVDWLVEVHEKFQCYPETLFLS 222
Query: 126 MNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
+N +DRFL+ ++ K +QLL V L +AAK EE +P L E
Sbjct: 223 INLMDRFLAKNKVTMNK---LQLLAVTSLFIAAKFEEVNLPKLAE 264
>sp|Q9ZR04|CCD61_ARATH Putative cyclin-D6-1 OS=Arabidopsis thaliana GN=CYCD6-1 PE=3 SV=1
Length = 302
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 68 EELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMN 127
E L + + E + +P Y + L+S R +A+ I + + +++ L++N
Sbjct: 25 ETLPHSLFLVEFQHMPSSHYFHSLKSSAFLLSNRNQAISSITQYSRKFDDPSLTY-LAVN 83
Query: 128 YLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEV 165
YLDRFLS ++P+ K W ++L++++C+SL+AKM + ++
Sbjct: 84 YLDRFLSSEDMPQSKPWILKLISLSCVSLSAKMRKPDM 121
>sp|Q2V3B2|CCD51_ARATH Cyclin-D5-1 OS=Arabidopsis thaliana GN=CYCD5-1 PE=2 SV=2
Length = 323
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 91 LRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFL--SVYELPKGKDWTVQL 148
L S S R A+DWIL + F + ++++Y D FL L K + W ++L
Sbjct: 62 LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGLQKDETWAMRL 121
Query: 149 LTVACLSLAAKMEESEVPLL 168
L+VACLSLAAKMEE VP L
Sbjct: 122 LSVACLSLAAKMEERIVPGL 141
>sp|Q0JPA4|CCA12_ORYSJ Cyclin-A1-2 OS=Oryza sativa subsp. japonica GN=CYCA1-2 PE=3 SV=2
Length = 477
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 65 TVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCL 124
T++ ++ + E P D++ ++ D++ +R +DW+++ YR P + L
Sbjct: 209 TLASDIYMHLREAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 267
Query: 125 SMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
++NY+DR+LS E+ + + +QLL VAC+ +AAK EE P + E
Sbjct: 268 TVNYIDRYLSGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEF 311
>sp|Q7F830|CCA11_ORYSJ Cyclin-A1-1 OS=Oryza sativa subsp. japonica GN=CYCA1-1 PE=2 SV=1
Length = 508
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 65 TVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCL 124
T++ ++ + E P D++ ++ D++ +R +DW+++ YR P + L
Sbjct: 239 TLASDIYMHLREAETRKRPSTDFMETIQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 297
Query: 125 SMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
++NY+DR+LS E+ + + +QLL VAC+ +AAK EE P + E
Sbjct: 298 TVNYIDRYLSGNEINRQR---LQLLGVACMLIAAKYEEICAPQVEEF 341
>sp|Q2QMW1|CCD52_ORYSJ Cyclin-D5-2 OS=Oryza sativa subsp. japonica GN=CYCD5-2 PE=2 SV=1
Length = 365
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 99 RVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPK-GKDWTVQLLTVACLSLA 157
+ R A+ WIL+ ++ FG + L++ Y DRF + + W +LL++AC+S+A
Sbjct: 98 QARLAAVKWILETRGYFGFGHRTAYLAIAYFDRFCLRRRVDREAMPWAARLLSIACVSVA 157
Query: 158 AKMEESEVPLLVEL 171
AKMEE + P L E
Sbjct: 158 AKMEEYQSPALSEF 171
>sp|Q0INT0|CCA13_ORYSJ Cyclin-A1-3 OS=Oryza sativa subsp. japonica GN=CYCA1-3 PE=2 SV=2
Length = 491
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 65 TVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCL 124
T++ ++ + E P D++ L+ D++ +R +DW+++ YR P + L
Sbjct: 222 TLASDIYMHLREAETRKHPSTDFMETLQK-DVNPSMRAILIDWLVEVAEEYRLVPDTLYL 280
Query: 125 SMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
++NY+DR+LS E+ + + +QLL VAC+ +AAK +E P + E
Sbjct: 281 TVNYIDRYLSGNEINRQR---LQLLGVACMLIAAKYKEICAPQVEEF 324
>sp|Q90459|CCND1_DANRE G1/S-specific cyclin-D1 OS=Danio rerio GN=ccnd1 PE=2 SV=1
Length = 291
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 21/126 (16%)
Query: 45 QDSNFINKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREA 104
QDSN +N R +L+ M E LP +Y ++ ++ ++R+
Sbjct: 18 QDSNLLNDR----------------VLQTMLKAEENYLPSPNYFKCVQ-KEIVPKMRKIV 60
Query: 105 LDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESE 164
W+L+ + F L+MNYLDRFLSV K + +QLL C+ LA+KM+E+
Sbjct: 61 ATWMLEVCEEQKCEEEVFPLAMNYLDRFLSVEPTKKTR---LQLLGATCMFLASKMKET- 116
Query: 165 VPLLVE 170
VPL E
Sbjct: 117 VPLTAE 122
>sp|Q3ECW2|CCA34_ARATH Cyclin-A3-4 OS=Arabidopsis thaliana GN=CYCA3-4 PE=1 SV=1
Length = 370
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 13/130 (10%)
Query: 45 QDSNFINKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKH----DYLNRLRSGDLDSRV 100
+ S I RS+ P PF + LREM EG+ PKH DY+ +++S DL +
Sbjct: 77 EASVLIESRSVDPQMCEPFASDICAYLREM---EGK--PKHRPLPDYIEKVQS-DLTPHM 130
Query: 101 RREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKM 160
R +DW+++ Y+ + L+++Y+DRFLSV + + K +QL+ V+ + +A++
Sbjct: 131 RAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQK---LQLVGVSAMLIASRK 187
Query: 161 EESEVPLLVE 170
E P VE
Sbjct: 188 YEEIGPPKVE 197
>sp|Q9FMH5|CCA31_ARATH Putative cyclin-A3-1 OS=Arabidopsis thaliana GN=CYCA3-1 PE=3 SV=1
Length = 355
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
Query: 50 INKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWIL 109
I+ RS P P+ T E LR++ VK L+ DY+ +++ D+ S +R +DW++
Sbjct: 74 IDTRSDDPQMCGPYVTSIFEYLRQLEVKSRPLV---DYIEKIQK-DVTSNMRGVLVDWLV 129
Query: 110 KAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
+ Y+ + L+++Y+DRFLS+ + K + +QLL V + +A+K EE P
Sbjct: 130 EVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQR---LQLLGVTSMLIASKYEEITPP 183
>sp|Q9LDM4|CCB23_ARATH Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2
Length = 429
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 95 DLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACL 154
DL+ R+R +DW+++ H + + L++N +DRFL+V+++ + K +QL+ V L
Sbjct: 204 DLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK---LQLVGVTAL 260
Query: 155 SLAAKMEESEVPLLVEL 171
LA K EE VP++ +L
Sbjct: 261 LLACKYEEVSVPVVDDL 277
>sp|Q9C6A9|CCA32_ARATH Cyclin-A3-2 OS=Arabidopsis thaliana GN=CYCA3-2 PE=2 SV=1
Length = 372
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 5/117 (4%)
Query: 50 INKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWIL 109
I+ RS P P+ E LR++ VK + P DY+ +++ D+ +R +DW++
Sbjct: 89 IDSRSDDPQMCGPYVADIYEYLRQLEVKPKQR-PLPDYIEKVQK-DVTPSMRGVLVDWLV 146
Query: 110 KAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
+ Y+ G + L+++++DRFLS+ + K K +QL+ V+ + +A+K EE P
Sbjct: 147 EVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQK---LQLVGVSAMLIASKYEEISPP 200
>sp|P30284|CG21_EMENI G2/mitotic-specific cyclin-B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nimE
PE=2 SV=1
Length = 478
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LRE+ E E LP DY++ DL+ ++R +DW+++ H +R P + L++N +D
Sbjct: 216 LREL---EMETLPNPDYIDH--QPDLEWKMRGILVDWLIEVHTRFRLLPETLFLAVNIID 270
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
RFLS + + +QL+ VA + +A+K EE P
Sbjct: 271 RFLSAEVVALDR---LQLVGVAAMFIASKYEEVLSP 303
>sp|P47827|CCNA2_XENLA Cyclin-A2 OS=Xenopus laevis GN=ccna2 PE=2 SV=1
Length = 415
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM VK PK Y+ + D+ +R +DW+++ Y+ + L++NY+D
Sbjct: 168 LREMEVK---CKPKAGYMQK--QPDITGNMRAILVDWLVEVGEEYKLQNETLYLAVNYID 222
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 223 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 259
>sp|P51943|CCNA2_MOUSE Cyclin-A2 OS=Mus musculus GN=Ccna2 PE=1 SV=2
Length = 422
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM VK PK Y+ R D+ + +R +DW+++ Y+ + L++NY+D
Sbjct: 176 LREMEVK---CKPKVGYMKR--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYID 230
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 231 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 267
>sp|P18606|CCNA1_XENLA Cyclin-A1 OS=Xenopus laevis GN=ccna1 PE=2 SV=1
Length = 418
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 8/98 (8%)
Query: 69 ELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNY 128
+ LRE +K PK Y+ + D+ S +R +DW+++ Y+ + L+MNY
Sbjct: 170 QYLREAELKHR---PKAYYMRK--QPDITSAMRTILVDWLVEVGEEYKLHTETLYLAMNY 224
Query: 129 LDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
LDRFLS + +GK +QL+ A + LA+K EE P
Sbjct: 225 LDRFLSCMSVLRGK---LQLVGTAAILLASKYEEIYPP 259
>sp|P30183|CCB11_ARATH Cyclin-B1-1 OS=Arabidopsis thaliana GN=CYCB1-1 PE=1 SV=2
Length = 428
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 78 EGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYE 137
E E P+ DY+ D++ ++R ++W++ H + P +F L++N LDRFLSV
Sbjct: 177 ESEWRPR-DYMAS--QPDINEKMRLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKP 233
Query: 138 LPKGKDWTVQLLTVACLSLAAKMEESEVPLLVEL 171
+P+ + +QL+ ++ L ++AK EE P + +L
Sbjct: 234 VPRKE---LQLVGLSALLMSAKYEEIWPPQVEDL 264
>sp|P50755|CCND1_XENLA G1/S-specific cyclin-D1 OS=Xenopus laevis GN=ccnd1 PE=2 SV=1
Length = 291
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 66 VSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLS 125
+++ +L+ M E P Y ++ L + +R+ W+L+ + F L+
Sbjct: 21 ITDRVLQTMLKAEETSCPSMSYFKCVQKEILPN-MRKIVATWMLEVCEEQKCEEEVFPLA 79
Query: 126 MNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
MNYLDRFLSV P K W +QLL C+ LA+KM+E+ +PL E
Sbjct: 80 MNYLDRFLSVE--PLRKSW-LQLLGATCMFLASKMKET-IPLTAE 120
>sp|P24865|CG21_SCHPO G2/mitotic-specific cyclin cig1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cig1 PE=1 SV=2
Length = 415
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 69 ELLREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNY 128
E+ M E +L P +Y++ ++D R +DWI++ H+R P + L++N
Sbjct: 166 EIFHYMQSLERKLAPPPNYMSV--QQEIDWVTRHMLVDWIVQVQIHFRLLPETLFLAVNL 223
Query: 129 LDRFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
+DRFLS+ + K VQL+ ++ L +A K EE P
Sbjct: 224 IDRFLSIKVVSLQK---VQLVGLSALLIACKYEEIHPP 258
>sp|P43449|CCNA2_CHICK Cyclin-A2 OS=Gallus gallus GN=CCNA2 PE=2 SV=1
Length = 395
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM VK PK Y+ + D+ + +R +DW+++ Y+ + L++NY+D
Sbjct: 150 LREMEVK---CKPKIGYMKK--QPDITNNMRAILVDWLVEVGEEYKLQNETLHLAVNYID 204
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 205 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 241
>sp|P20248|CCNA2_HUMAN Cyclin-A2 OS=Homo sapiens GN=CCNA2 PE=1 SV=2
Length = 432
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM VK PK Y+ + D+ + +R +DW+++ Y+ + L++NY+D
Sbjct: 186 LREMEVK---CKPKVGYMKK--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYID 240
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 241 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 277
>sp|P30274|CCNA2_BOVIN Cyclin-A2 OS=Bos taurus GN=CCNA2 PE=1 SV=2
Length = 430
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM VK PK Y+ + D+ + +R +DW+++ Y+ + L++NY+D
Sbjct: 184 LREMEVK---CKPKVGYMKK--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYID 238
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 239 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 275
>sp|O15995|CCNE_HEMPU G1/S-specific cyclin-E OS=Hemicentrotus pulcherrimus GN=CYCE PE=2
SV=1
Length = 424
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 47 SNFINKRSIFPMGFF----PFQTVSEELLRE----MAVKEGELLPKHDYLNRLRSGDLDS 98
+N++ R++FP P + + L E M KE KHD L S L
Sbjct: 96 ANWVTFRNLFPAHVSDRASPIPLLHWDDLPEVWTIMTRKEALCPRKHDCLKSHPS--LGE 153
Query: 99 RVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYE-LPKGKDWTVQLLTVACLSLA 157
R+R LDW+++ YR SF L+ +++DR+L+ E +PK K +QL+ + L +A
Sbjct: 154 RMRAILLDWLIEVCEVYRLHRESFYLAADFVDRYLAAKENVPKTK---LQLIGITSLFVA 210
Query: 158 AKMEESEVPLLVE 170
AK+EE P L E
Sbjct: 211 AKLEEIYPPKLHE 223
>sp|P37881|CCNA2_MESAU Cyclin-A2 OS=Mesocricetus auratus GN=CCNA2 PE=2 SV=1
Length = 421
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 71 LREMAVKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLD 130
LREM +K PK Y+ + D+ + +R +DW+++ Y+ + L++NY+D
Sbjct: 175 LREMEIK---CKPKVGYMKK--QPDITNSMRAILVDWLVEVGEEYKLQNETLHLAVNYID 229
Query: 131 RFLSVYELPKGKDWTVQLLTVACLSLAAKMEESEVPLLVE 170
RFLS + +GK +QL+ A + LA+K EE P + E
Sbjct: 230 RFLSSMSVLRGK---LQLVGTAAMLLASKFEEIYPPEVAE 266
>sp|Q0DQA9|CCD51_ORYSJ Cyclin-D5-1 OS=Oryza sativa subsp. japonica GN=CYCD5-1 PE=2 SV=2
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 100 VRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKG-KDWTVQLLTVACLSLAA 158
RR + WIL+ + F + L++ Y DRF + + W +LL VAC+SLAA
Sbjct: 108 ARRATVKWILETRGCFGFCHRTAYLAIAYFDRFCLRRCIDRSVMPWAARLLAVACVSLAA 167
Query: 159 KMEESEVPLLVELQV 173
KMEE P L E +
Sbjct: 168 KMEEYRAPALSEFRA 182
>sp|Q7XSJ6|CCB21_ORYSJ Cyclin-B2-1 OS=Oryza sativa subsp. japonica GN=CYCB2-1 PE=1 SV=2
Length = 420
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 86 DYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWT 145
DY++ GD++ ++R +DW+++ H + + L++N +DRFL +P+ K
Sbjct: 174 DYMSS--QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKK--- 228
Query: 146 VQLLTVACLSLAAKMEESEVPLLVEL 171
+QL+ V + LA K EE VP++ +L
Sbjct: 229 LQLVGVTAMLLACKYEEVAVPVVEDL 254
>sp|Q01J96|CCB21_ORYSI Cyclin-B2-1 OS=Oryza sativa subsp. indica GN=CYCB2-1 PE=1 SV=1
Length = 423
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 86 DYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWT 145
DY++ GD++ ++R +DW+++ H + + L++N +DRFL +P+ K
Sbjct: 174 DYMSS--QGDINEKMRAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKK--- 228
Query: 146 VQLLTVACLSLAAKMEESEVPLLVEL 171
+QL+ V + LA K EE VP++ +L
Sbjct: 229 LQLVGVTAMLLACKYEEVAVPVVEDL 254
>sp|A0MEB5|CCA33_ARATH Cyclin-A3-3 OS=Arabidopsis thaliana GN=CYCA3-3 PE=2 SV=2
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 41 QNHSQDSNFINKRSIFPMGFFPFQTVSEELLREMAVKEGELLPKHDYLNRLRSGDLDSRV 100
Q + Q + I+ RS P + + E LRE+ VK +L P HDY+ +++ D+
Sbjct: 34 QENIQSGSDIDARSDDPQMCGLYVSDIYEYLRELEVK-PKLRPLHDYIEKIQE-DITPSK 91
Query: 101 RREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSVYELPKGKDWTVQLLTVACLSLAAKM 160
R +DW+++ + + L+++Y+DRFLS+ + + W +QL+ V+ + +A+K
Sbjct: 92 RGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMV--NEHW-LQLVGVSAMFIASKY 148
Query: 161 EESEVP 166
EE P
Sbjct: 149 EEKRRP 154
>sp|Q147G5|CCA22_ARATH Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=2 SV=1
Length = 436
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 76 VKEGELLPKHDYLNRLRSGDLDSRVRREALDWILKAHAHYRFGPMSFCLSMNYLDRFLSV 135
V E + P +Y+ L D+D +R+ +DW+++ Y+ P + L++N +DRFLS
Sbjct: 182 VAELQQRPLANYME-LVQRDIDPDMRKILIDWLVEVSDDYKLVPDTLYLTVNLIDRFLSN 240
Query: 136 YELPKGKDWTVQLLTVACLSLAAKMEESEVP 166
+ + + +QLL V+C+ +A+K EE P
Sbjct: 241 SYIERQR---LQLLGVSCMLIASKYEELSAP 268
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,206,690
Number of Sequences: 539616
Number of extensions: 2482855
Number of successful extensions: 7468
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 7236
Number of HSP's gapped (non-prelim): 243
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)