Query 030688
Match_columns 173
No_of_seqs 28 out of 30
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 04:19:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030688.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030688hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1s0pa_ a.192.1.1 (A:) N-termi 33.7 2.9 0.00021 31.7 -0.9 19 101-119 147-165 (176)
2 d2gf3a2 d.16.1.3 (A:218-321) S 20.8 56 0.0041 20.9 4.0 30 7-36 60-91 (104)
3 d2i9wa2 g.74.1.1 (A:1-39) Hypo 18.3 20 0.0014 21.4 1.0 12 142-153 8-19 (39)
4 d1u2fa_ d.58.7.1 (A:) Splicing 16.8 83 0.0061 19.0 4.0 25 114-138 47-71 (90)
5 d1jqia2 e.6.1.1 (A:4-234) Buty 15.9 56 0.0041 22.9 3.3 24 12-36 5-29 (231)
6 d1eexg_ a.23.2.1 (G:) Diol deh 15.6 50 0.0036 24.2 3.0 24 5-32 90-113 (137)
7 d1iwpg_ a.23.2.1 (G:) Diol deh 15.4 44 0.0032 24.5 2.6 23 5-31 91-113 (138)
8 d1iz6a1 b.34.5.2 (A:2-70) Euka 14.5 55 0.004 20.3 2.6 31 107-137 26-62 (69)
9 d1mjca_ b.40.4.5 (A:) Major co 14.3 33 0.0024 21.4 1.4 21 113-134 13-33 (69)
10 d1zfoa_ g.39.1.4 (A:) LASP-1 { 13.9 26 0.0019 19.9 0.7 11 104-114 17-27 (30)
No 1
>d1s0pa_ a.192.1.1 (A:) N-terminal domain of adenylylcyclase associated protein, CAP {Dictyostelium discoideum [TaxId: 44689]}
Probab=33.73 E-value=2.9 Score=31.72 Aligned_cols=19 Identities=42% Similarity=0.663 Sum_probs=14.4
Q ss_pred hhccccccccCccCCCccc
Q 030688 101 YYKDLNRINKDHHTTGTGF 119 (173)
Q Consensus 101 YYkdL~~IDKqHHTTGtGF 119 (173)
.+++|-.-=|+|||||--+
T Consensus 147 ~l~~L~~YVkehhttGl~W 165 (176)
T d1s0pa_ 147 FLKDLEKYIKQYHTTGLTW 165 (176)
T ss_dssp HHHHHHHHHHHHSTTSCCC
T ss_pred HHHHHHHHHHHhCCCCCcc
Confidence 3456666779999999765
No 2
>d2gf3a2 d.16.1.3 (A:218-321) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}
Probab=20.75 E-value=56 Score=20.94 Aligned_cols=30 Identities=17% Similarity=0.256 Sum_probs=23.8
Q ss_pred CCCCcc--CCCHHHHHHHHHHHHHhhhhcCCC
Q 030688 7 PDRSDV--HLSREEEAKMEDEVRENFENLAPK 36 (173)
Q Consensus 7 P~RSD~--~l~~Eeq~~ie~evR~~Fd~~APK 36 (173)
|++-|. ..++++.+++.+-|+.||=++.|.
T Consensus 60 Pd~~dr~~~~~~~~~~~l~~~v~~~~Pgl~~~ 91 (104)
T d2gf3a2 60 PDTINREFGVYPEDESNLRAFLEEYMPGANGE 91 (104)
T ss_dssp TTTCCCCTTSSHHHHHHHHHHHHHHCGGGCSC
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHCCCCCCC
Confidence 655444 467888999999999999988764
No 3
>d2i9wa2 g.74.1.1 (A:1-39) Hypothetical protein Psyc2064 {Psychrobacter arcticus [TaxId: 334543]}
Probab=18.27 E-value=20 Score=21.40 Aligned_cols=12 Identities=42% Similarity=0.631 Sum_probs=10.0
Q ss_pred CccccCCCCCCC
Q 030688 142 SSCKGNPATNEW 153 (173)
Q Consensus 142 ~s~k~NPATNDW 153 (173)
-.|..|||.|+-
T Consensus 8 cpcq~np~~~~i 19 (39)
T d2i9wa2 8 CPCQINPALNAV 19 (39)
T ss_dssp CGGGCCTTCCCS
T ss_pred cccccCcccccc
Confidence 579999999873
No 4
>d1u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.81 E-value=83 Score=18.99 Aligned_cols=25 Identities=12% Similarity=0.153 Sum_probs=16.5
Q ss_pred CCCccceEeeecCCceeEeecCCCC
Q 030688 114 TTGTGFIKMENANGKSFILAPDNDD 138 (173)
Q Consensus 114 TTGtGFIKve~~~g~~f~l~~~~~~ 138 (173)
..|.|||..........-|+.+...
T Consensus 47 ~kg~afV~f~~~e~a~~a~~l~g~~ 71 (90)
T d1u2fa_ 47 DKNFAFLEFRSVDETTQAMAFDGII 71 (90)
T ss_dssp TTTEEEEEESSCTTTTTGGGGSSCC
T ss_pred CceEEEEEeCCHHHHHHHHhhCCcE
Confidence 3588999888766644455655555
No 5
>d1jqia2 e.6.1.1 (A:4-234) Butyryl-CoA dehydrogenase, NM domains {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=15.92 E-value=56 Score=22.93 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=18.5
Q ss_pred cCCCHHHHHHHHHHHHHhhhh-cCCC
Q 030688 12 VHLSREEEAKMEDEVRENFEN-LAPK 36 (173)
Q Consensus 12 ~~l~~Eeq~~ie~evR~~Fd~-~APK 36 (173)
.-|+ |||..+.+.+|+|.+. ++|.
T Consensus 5 ~~L~-ee~~~l~~~~r~f~~~~i~p~ 29 (231)
T d1jqia2 5 VELP-ETHQMLRQTCRDFAEKELVPI 29 (231)
T ss_dssp SCCC-HHHHHHHHHHHHHHHHHTTTT
T ss_pred CCCC-HHHHHHHHHHHHHHHHhChHH
Confidence 4566 7778899999999986 6653
No 6
>d1eexg_ a.23.2.1 (G:) Diol dehydratase, gamma subunit {Klebsiella oxytoca [TaxId: 571]}
Probab=15.64 E-value=50 Score=24.20 Aligned_cols=24 Identities=29% Similarity=0.560 Sum_probs=20.2
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhhhh
Q 030688 5 RRPDRSDVHLSREEEAKMEDEVRENFEN 32 (173)
Q Consensus 5 ~rP~RSD~~l~~Eeq~~ie~evR~~Fd~ 32 (173)
-||.|| +.+|-..|+++++.-|.+
T Consensus 90 LRP~RS----tk~ELl~iA~eL~~~Y~A 113 (137)
T d1eexg_ 90 LRPYRS----TKEELLAIADDLESRYQA 113 (137)
T ss_dssp HSTTSC----CHHHHHHHHHHHHHHHCC
T ss_pred hCCCcc----hHHHHHHHHHHHHHHhCc
Confidence 489998 779999999999987653
No 7
>d1iwpg_ a.23.2.1 (G:) Diol dehydratase, gamma subunit {Klebsiella pneumoniae [TaxId: 573]}
Probab=15.38 E-value=44 Score=24.52 Aligned_cols=23 Identities=35% Similarity=0.483 Sum_probs=19.7
Q ss_pred CCCCCCccCCCHHHHHHHHHHHHHhhh
Q 030688 5 RRPDRSDVHLSREEEAKMEDEVRENFE 31 (173)
Q Consensus 5 ~rP~RSD~~l~~Eeq~~ie~evR~~Fd 31 (173)
-||.|| +.+|-..|+++++.-|.
T Consensus 91 LRP~RS----tk~ELl~iA~eL~~~Y~ 113 (138)
T d1iwpg_ 91 LRPFRS----SQAELLAIADELEHTWH 113 (138)
T ss_dssp HSTTSC----CHHHHHHHHHHHHHTSC
T ss_pred hCCCcc----hHHHHHHHHHHHHHHhC
Confidence 489998 67999999999997764
No 8
>d1iz6a1 b.34.5.2 (A:2-70) Eukaryotic initiation translation factor 5a (eIF5a) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=14.49 E-value=55 Score=20.34 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=21.4
Q ss_pred ccccCccCCCc-c--ceEeee---cCCceeEeecCCC
Q 030688 107 RINKDHHTTGT-G--FIKMEN---ANGKSFILAPDND 137 (173)
Q Consensus 107 ~IDKqHHTTGt-G--FIKve~---~~g~~f~l~~~~~ 137 (173)
.+|-+|+++|. | |+++.- ..|+.+.......
T Consensus 26 V~e~~~~kpGk~G~a~~~~k~k~i~tG~~~e~~~~s~ 62 (69)
T d1iz6a1 26 IVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTS 62 (69)
T ss_dssp EEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETT
T ss_pred EEEEEEEcCCCcCccEEEEEEEEcccCCEEEEEEcCC
Confidence 56778999886 5 888775 4566666655443
No 9
>d1mjca_ b.40.4.5 (A:) Major cold shock protein {Escherichia coli [TaxId: 562]}
Probab=14.26 E-value=33 Score=21.39 Aligned_cols=21 Identities=24% Similarity=0.425 Sum_probs=13.6
Q ss_pred cCCCccceEeeecCCceeEeec
Q 030688 113 HTTGTGFIKMENANGKSFILAP 134 (173)
Q Consensus 113 HTTGtGFIKve~~~g~~f~l~~ 134 (173)
+.-|.|||..+. +|..+=+..
T Consensus 13 ~~kGfGFI~~d~-g~~diFvH~ 33 (69)
T d1mjca_ 13 ADKGFGFITPDD-GSKDVFVHF 33 (69)
T ss_dssp TTTTEEEEEETT-SCCCEEEEG
T ss_pred CCCCEEEEEEcC-CCccEEEEh
Confidence 577999998773 444444433
No 10
>d1zfoa_ g.39.1.4 (A:) LASP-1 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=13.93 E-value=26 Score=19.94 Aligned_cols=11 Identities=27% Similarity=0.392 Sum_probs=9.3
Q ss_pred cccccccCccC
Q 030688 104 DLNRINKDHHT 114 (173)
Q Consensus 104 dL~~IDKqHHT 114 (173)
.|+||||--|-
T Consensus 17 kl~ClDk~WHK 27 (30)
T d1zfoa_ 17 KVNCLDKFWHK 27 (30)
T ss_dssp CCCSSSSCCCG
T ss_pred HhhhhHHHHhh
Confidence 69999998775
Done!