BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 030689
         (173 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q751J3|ATM_ASHGO Serine/threonine-protein kinase TEL1 OS=Ashbya gossypii (strain ATCC
            10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=TEL1
            PE=3 SV=1
          Length = 2768

 Score = 33.5 bits (75), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 102  TGIFTSEIYAEDCIFEDPTIRFRGTELYSRNLRLLVPFFEYPSIGLQNIKKVRYFLQIDI 161
            T +F + IY +D + +   +  R   LYS  L  L PF  +P   +   + +R+ +    
Sbjct: 1401 TSLFENTIYHDDSLLDTELLDHRALNLYSEILSFLPPFTGFPPNFVPKERVLRHLISQTT 1460

Query: 162  VFQL 165
             F+L
Sbjct: 1461 TFKL 1464


>sp|Q68DE3|K2018_HUMAN Basic helix-loop-helix domain-containing protein KIAA2018 OS=Homo
           sapiens GN=KIAA2018 PE=1 SV=3
          Length = 2245

 Score = 30.8 bits (68), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 38/70 (54%), Gaps = 6/70 (8%)

Query: 74  KQKDEILVSGID----DIVTILRSDYENAYFVTGIFTSEIYAED-CIFEDPTIRFRGTEL 128
           +Q DE+L++G +    + +  LR   E      G +   + A D C+++DPTI ++G  L
Sbjct: 71  RQNDELLLNGGNNEQAEEIKKLRKQLEEIQKENGRYIELLKANDICLYDDPTIHWKGN-L 129

Query: 129 YSRNLRLLVP 138
            +  + +++P
Sbjct: 130 KNSKVSVVIP 139


>sp|A9WMA0|CH601_RENSM 60 kDa chaperonin 1 OS=Renibacterium salmoninarum (strain ATCC
           33209 / DSM 20767 / JCM 11484 / NBRC 15589 / NCIMB 2235)
           GN=groL1 PE=3 SV=2
          Length = 542

 Score = 30.4 bits (67), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 77  DEILVSGIDDIVTILRSDYENAYFVTGIF-TSEIYAED 113
           +++L +G++D V + RS  +NA  + G+F T+E+   D
Sbjct: 484 EDLLAAGVNDPVKVTRSALQNAASIAGLFLTTEVVVAD 521


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.325    0.141    0.419 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,972,124
Number of Sequences: 539616
Number of extensions: 2394783
Number of successful extensions: 6539
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 6538
Number of HSP's gapped (non-prelim): 6
length of query: 173
length of database: 191,569,459
effective HSP length: 109
effective length of query: 64
effective length of database: 132,751,315
effective search space: 8496084160
effective search space used: 8496084160
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)