Query 030694
Match_columns 173
No_of_seqs 121 out of 1604
Neff 9.9
Searched_HMMs 46136
Date Fri Mar 29 03:10:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030694.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030694hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 7.3E-30 1.6E-34 193.0 10.5 166 1-171 126-293 (339)
2 COG0604 Qor NADPH:quinone redu 99.9 3.1E-27 6.8E-32 181.0 13.3 160 2-163 102-269 (326)
3 KOG0023 Alcohol dehydrogenase, 99.9 4.3E-26 9.3E-31 168.7 10.1 168 1-171 141-311 (360)
4 KOG0024 Sorbitol dehydrogenase 99.9 7.3E-25 1.6E-29 162.5 12.8 161 2-165 131-301 (354)
5 KOG1197 Predicted quinone oxid 99.9 1.1E-24 2.3E-29 156.8 13.0 153 2-156 106-265 (336)
6 PLN02586 probable cinnamyl alc 99.9 1.1E-24 2.5E-29 169.4 13.6 155 2-156 143-297 (360)
7 TIGR03366 HpnZ_proposed putati 99.9 2.7E-24 5.8E-29 162.1 13.4 161 2-166 80-247 (280)
8 cd08281 liver_ADH_like1 Zinc-d 99.9 9.3E-24 2E-28 164.9 15.4 155 2-157 151-312 (371)
9 PLN02514 cinnamyl-alcohol dehy 99.9 8E-24 1.7E-28 164.5 13.8 162 2-165 140-301 (357)
10 PLN02178 cinnamyl-alcohol dehy 99.9 9.3E-24 2E-28 165.1 13.7 155 2-157 137-293 (375)
11 PRK09880 L-idonate 5-dehydroge 99.9 2.9E-23 6.2E-28 160.6 14.9 153 2-157 131-286 (343)
12 TIGR03451 mycoS_dep_FDH mycoth 99.9 3.7E-23 8.1E-28 160.8 14.0 154 2-156 136-297 (358)
13 cd08239 THR_DH_like L-threonin 99.9 2.1E-23 4.5E-28 160.9 12.5 152 2-156 124-281 (339)
14 KOG0022 Alcohol dehydrogenase, 99.9 1.8E-22 4E-27 149.1 12.0 167 2-169 152-328 (375)
15 TIGR02818 adh_III_F_hyde S-(hy 99.9 2.3E-22 4.9E-27 157.0 13.2 149 2-151 145-303 (368)
16 PLN02740 Alcohol dehydrogenase 99.9 4.2E-22 9.2E-27 156.1 14.3 139 2-141 158-304 (381)
17 COG1062 AdhC Zn-dependent alco 99.9 4.6E-22 9.9E-27 148.8 13.5 160 2-165 145-312 (366)
18 TIGR02822 adh_fam_2 zinc-bindi 99.9 2.2E-22 4.8E-27 154.9 12.1 149 2-157 126-275 (329)
19 TIGR03201 dearomat_had 6-hydro 99.9 4.1E-22 8.8E-27 154.5 13.1 159 2-164 121-297 (349)
20 PLN02827 Alcohol dehydrogenase 99.9 1.2E-21 2.6E-26 153.4 15.2 155 2-157 153-316 (378)
21 cd08300 alcohol_DH_class_III c 99.9 8.4E-22 1.8E-26 153.8 14.0 138 2-140 146-291 (368)
22 PLN03154 putative allyl alcoho 99.9 1.2E-21 2.6E-26 151.9 13.9 147 10-157 125-284 (348)
23 KOG1198 Zinc-binding oxidoredu 99.9 7.3E-22 1.6E-26 152.0 12.5 136 2-139 111-257 (347)
24 cd08277 liver_alcohol_DH_like 99.9 3.9E-21 8.4E-26 149.9 15.4 150 2-152 144-302 (365)
25 cd08301 alcohol_DH_plants Plan 99.9 4.8E-21 1E-25 149.5 15.7 153 2-156 147-309 (369)
26 cd08295 double_bond_reductase_ 99.9 3.5E-21 7.6E-26 148.6 14.3 138 2-140 108-254 (338)
27 TIGR02825 B4_12hDH leukotriene 99.9 1.5E-21 3.2E-26 149.9 12.1 136 3-140 94-240 (325)
28 cd08296 CAD_like Cinnamyl alco 99.9 5.5E-21 1.2E-25 147.2 15.0 156 2-159 124-281 (333)
29 cd08233 butanediol_DH_like (2R 99.9 2.6E-21 5.6E-26 150.0 12.9 154 2-158 134-293 (351)
30 cd08237 ribitol-5-phosphate_DH 99.9 1.2E-21 2.5E-26 151.6 10.1 149 2-158 122-277 (341)
31 cd08230 glucose_DH Glucose deh 99.9 6E-21 1.3E-25 148.3 13.7 160 2-167 128-303 (355)
32 COG1063 Tdh Threonine dehydrog 99.9 7.6E-21 1.6E-25 147.4 13.4 155 2-157 128-290 (350)
33 cd08231 MDR_TM0436_like Hypoth 99.9 1.7E-20 3.8E-25 145.9 14.5 154 2-156 136-301 (361)
34 cd08294 leukotriene_B4_DH_like 99.9 1.4E-20 3E-25 144.4 13.6 136 2-139 95-243 (329)
35 cd08293 PTGR2 Prostaglandin re 99.9 1.4E-20 3.1E-25 145.4 13.8 137 2-139 108-256 (345)
36 PRK10309 galactitol-1-phosphat 99.9 2.1E-20 4.5E-25 144.8 14.4 153 2-157 122-283 (347)
37 KOG0025 Zn2+-binding dehydroge 99.9 1.5E-20 3.3E-25 137.5 12.7 166 2-168 120-296 (354)
38 cd05284 arabinose_DH_like D-ar 99.8 1.8E-20 4E-25 144.4 12.9 152 2-156 126-284 (340)
39 cd05283 CAD1 Cinnamyl alcohol 99.8 2.8E-20 6E-25 143.5 13.6 153 2-156 130-282 (337)
40 cd08278 benzyl_alcohol_DH Benz 99.8 4.6E-20 9.9E-25 143.9 14.9 154 2-156 146-306 (365)
41 cd08291 ETR_like_1 2-enoyl thi 99.8 4.8E-20 1E-24 141.5 12.7 152 2-157 104-264 (324)
42 cd08292 ETR_like_2 2-enoyl thi 99.8 1.1E-19 2.3E-24 139.1 14.3 153 2-157 100-259 (324)
43 COG2130 Putative NADP-dependen 99.8 6.3E-20 1.4E-24 135.2 11.7 137 3-140 109-252 (340)
44 cd05188 MDR Medium chain reduc 99.8 1.1E-19 2.3E-24 135.4 13.1 154 2-156 94-252 (271)
45 TIGR01202 bchC 2-desacetyl-2-h 99.8 3.9E-20 8.5E-25 141.2 10.6 143 2-157 108-251 (308)
46 cd08246 crotonyl_coA_red croto 99.8 1E-19 2.2E-24 143.2 12.9 153 2-156 151-335 (393)
47 cd05279 Zn_ADH1 Liver alcohol 99.8 2.1E-19 4.5E-24 140.2 14.2 148 2-150 143-300 (365)
48 cd08258 Zn_ADH4 Alcohol dehydr 99.8 1.1E-19 2.5E-24 138.5 12.2 164 2-170 125-296 (306)
49 cd08240 6_hydroxyhexanoate_dh_ 99.8 2.9E-19 6.3E-24 138.4 14.2 154 2-156 135-293 (350)
50 cd08299 alcohol_DH_class_I_II_ 99.8 3.5E-19 7.5E-24 139.3 14.1 139 2-141 150-296 (373)
51 cd08286 FDH_like_ADH2 formalde 99.8 4.2E-19 9.1E-24 137.2 14.1 153 3-156 125-285 (345)
52 cd08263 Zn_ADH10 Alcohol dehyd 99.8 3.6E-19 7.9E-24 138.8 13.8 154 2-156 147-308 (367)
53 cd08254 hydroxyacyl_CoA_DH 6-h 99.8 3.1E-19 6.6E-24 137.3 12.5 154 2-156 125-282 (338)
54 cd08297 CAD3 Cinnamyl alcohol 99.8 6.5E-19 1.4E-23 136.0 14.2 153 2-156 126-285 (341)
55 KOG1202 Animal-type fatty acid 99.8 3.6E-20 7.8E-25 155.1 7.3 160 2-162 1512-1681(2376)
56 cd08289 MDR_yhfp_like Yhfp put 99.8 6.5E-19 1.4E-23 135.0 13.7 154 2-157 103-264 (326)
57 TIGR02817 adh_fam_1 zinc-bindi 99.8 7.2E-19 1.6E-23 135.3 13.9 135 2-137 103-247 (336)
58 cd08260 Zn_ADH6 Alcohol dehydr 99.8 8.7E-19 1.9E-23 135.5 13.9 149 7-156 130-286 (345)
59 cd05282 ETR_like 2-enoyl thioe 99.8 1.1E-18 2.3E-23 133.5 14.1 153 2-156 98-257 (323)
60 PRK09422 ethanol-active dehydr 99.8 1.3E-18 2.8E-23 134.1 14.6 153 2-156 123-280 (338)
61 cd08285 NADP_ADH NADP(H)-depen 99.8 1.4E-18 3E-23 134.8 14.8 134 6-141 131-270 (351)
62 cd05280 MDR_yhdh_yhfp Yhdh and 99.8 2E-18 4.3E-23 132.1 15.1 153 2-156 103-263 (325)
63 cd08290 ETR 2-enoyl thioester 99.8 1.2E-18 2.6E-23 134.4 14.0 154 2-157 106-272 (341)
64 cd05285 sorbitol_DH Sorbitol d 99.8 1.1E-18 2.3E-23 135.0 13.6 151 2-155 124-283 (343)
65 cd08274 MDR9 Medium chain dehy 99.8 1.2E-18 2.7E-23 134.7 13.4 151 2-156 138-293 (350)
66 cd08279 Zn_ADH_class_III Class 99.8 3E-18 6.6E-23 133.5 14.6 153 2-155 142-302 (363)
67 cd08243 quinone_oxidoreductase 99.8 2.6E-18 5.7E-23 130.9 13.9 137 2-140 102-241 (320)
68 PTZ00354 alcohol dehydrogenase 99.8 2.5E-18 5.3E-23 132.0 13.7 151 2-154 100-259 (334)
69 TIGR02823 oxido_YhdH putative 99.8 4.4E-18 9.6E-23 130.3 14.9 153 2-156 102-261 (323)
70 cd08244 MDR_enoyl_red Possible 99.8 3.8E-18 8.2E-23 130.5 14.1 153 2-157 103-262 (324)
71 cd08261 Zn_ADH7 Alcohol dehydr 99.8 4.1E-18 8.9E-23 131.4 14.3 150 2-155 122-276 (337)
72 TIGR01751 crot-CoA-red crotony 99.8 1.8E-18 4E-23 136.3 12.5 152 2-155 147-329 (398)
73 cd08284 FDH_like_2 Glutathione 99.8 3.5E-18 7.5E-23 132.0 13.5 148 6-156 132-286 (344)
74 PRK10083 putative oxidoreducta 99.8 4.3E-18 9.3E-23 131.3 14.0 151 2-155 122-277 (339)
75 cd05278 FDH_like Formaldehyde 99.8 4.9E-18 1.1E-22 131.2 14.1 138 2-141 126-271 (347)
76 cd08232 idonate-5-DH L-idonate 99.8 8.1E-18 1.8E-22 129.8 14.8 151 2-156 127-281 (339)
77 cd08283 FDH_like_1 Glutathione 99.8 6.1E-18 1.3E-22 132.9 14.2 152 3-156 144-326 (386)
78 TIGR02819 fdhA_non_GSH formald 99.8 6.3E-18 1.4E-22 133.0 14.2 136 2-139 140-301 (393)
79 cd08252 AL_MDR Arginate lyase 99.8 1.1E-17 2.4E-22 128.7 14.9 152 2-156 104-265 (336)
80 cd05288 PGDH Prostaglandin deh 99.8 6.4E-18 1.4E-22 129.6 13.6 139 2-141 101-248 (329)
81 cd08235 iditol_2_DH_like L-idi 99.8 5.7E-18 1.2E-22 130.7 13.1 152 2-156 122-286 (343)
82 cd08245 CAD Cinnamyl alcohol d 99.8 1.2E-17 2.7E-22 128.2 14.9 152 2-155 123-275 (330)
83 cd08249 enoyl_reductase_like e 99.8 9.4E-18 2E-22 129.6 14.0 138 2-141 104-258 (339)
84 cd08262 Zn_ADH8 Alcohol dehydr 99.8 1.4E-17 3.1E-22 128.5 14.9 137 2-141 123-268 (341)
85 cd08236 sugar_DH NAD(P)-depend 99.8 1E-17 2.2E-22 129.4 13.9 136 2-141 121-262 (343)
86 cd08264 Zn_ADH_like2 Alcohol d 99.8 5.3E-18 1.1E-22 130.0 12.1 148 2-156 123-273 (325)
87 PF00107 ADH_zinc_N: Zinc-bind 99.8 4.3E-19 9.2E-24 119.1 5.1 113 53-168 1-119 (130)
88 cd08270 MDR4 Medium chain dehy 99.8 1.4E-17 3.1E-22 126.4 14.1 144 2-152 93-238 (305)
89 cd08256 Zn_ADH2 Alcohol dehydr 99.8 1.7E-17 3.7E-22 128.6 14.7 143 3-148 136-285 (350)
90 cd08265 Zn_ADH3 Alcohol dehydr 99.8 1.6E-17 3.5E-22 130.4 14.6 151 2-154 156-324 (384)
91 PRK10754 quinone oxidoreductas 99.8 7.7E-18 1.7E-22 129.2 12.5 137 2-140 100-242 (327)
92 cd08242 MDR_like Medium chain 99.8 1.8E-17 3.8E-22 126.9 14.0 148 2-156 117-264 (319)
93 PRK13771 putative alcohol dehy 99.8 5.4E-18 1.2E-22 130.4 11.0 135 2-141 123-259 (334)
94 cd08238 sorbose_phosphate_red 99.8 4.5E-18 9.8E-23 134.6 10.7 148 7-156 130-310 (410)
95 cd08287 FDH_like_ADH3 formalde 99.8 2.8E-17 6E-22 127.1 14.8 149 6-156 128-287 (345)
96 cd08276 MDR7 Medium chain dehy 99.8 2.6E-17 5.7E-22 126.3 14.2 153 2-156 120-279 (336)
97 cd08269 Zn_ADH9 Alcohol dehydr 99.7 5.7E-17 1.2E-21 123.4 14.2 150 2-156 92-249 (312)
98 PRK05396 tdh L-threonine 3-deh 99.7 5E-17 1.1E-21 125.5 14.0 151 2-156 126-282 (341)
99 cd08253 zeta_crystallin Zeta-c 99.7 5.4E-17 1.2E-21 123.5 13.8 152 2-155 104-261 (325)
100 smart00829 PKS_ER Enoylreducta 99.7 5.6E-17 1.2E-21 121.4 13.7 137 2-140 64-208 (288)
101 TIGR00692 tdh L-threonine 3-de 99.7 7E-17 1.5E-21 124.7 14.1 151 2-156 124-281 (340)
102 cd05286 QOR2 Quinone oxidoredu 99.7 5.1E-17 1.1E-21 123.3 13.1 137 2-140 96-238 (320)
103 cd08234 threonine_DH_like L-th 99.7 6.5E-17 1.4E-21 124.4 13.7 136 2-140 121-260 (334)
104 cd08248 RTN4I1 Human Reticulon 99.7 8E-17 1.7E-21 124.6 14.2 135 2-139 118-259 (350)
105 cd08298 CAD2 Cinnamyl alcohol 99.7 6.1E-17 1.3E-21 124.3 13.4 131 2-139 128-258 (329)
106 cd08282 PFDH_like Pseudomonas 99.7 8.8E-17 1.9E-21 125.9 14.1 136 2-140 132-288 (375)
107 cd08255 2-desacetyl-2-hydroxye 99.7 7.9E-17 1.7E-21 120.9 13.2 134 2-141 59-194 (277)
108 cd08250 Mgc45594_like Mgc45594 99.7 9.5E-17 2.1E-21 123.2 13.9 135 2-140 101-240 (329)
109 cd08259 Zn_ADH5 Alcohol dehydr 99.7 1.2E-16 2.6E-21 122.5 14.2 135 2-141 123-260 (332)
110 cd05195 enoyl_red enoyl reduct 99.7 1.2E-16 2.7E-21 119.6 13.2 137 2-140 68-212 (293)
111 PLN02702 L-idonate 5-dehydroge 99.7 2E-16 4.2E-21 123.4 14.7 152 2-156 143-304 (364)
112 cd05276 p53_inducible_oxidored 99.7 1.4E-16 3.1E-21 121.0 13.4 153 2-156 99-258 (323)
113 cd05281 TDH Threonine dehydrog 99.7 2E-16 4.2E-21 122.3 14.2 136 2-141 126-266 (341)
114 TIGR02824 quinone_pig3 putativ 99.7 1.9E-16 4.1E-21 120.6 13.9 153 2-156 99-258 (325)
115 cd08288 MDR_yhdh Yhdh putative 99.7 2.8E-16 6.1E-21 120.3 14.9 154 2-157 103-263 (324)
116 cd08251 polyketide_synthase po 99.7 1.4E-16 3E-21 120.4 12.9 136 2-140 81-222 (303)
117 cd08266 Zn_ADH_like1 Alcohol d 99.7 6.2E-16 1.3E-20 118.7 14.4 138 2-141 126-269 (342)
118 KOG1196 Predicted NAD-dependen 99.7 1.5E-16 3.4E-21 117.2 10.2 136 21-157 132-279 (343)
119 cd08241 QOR1 Quinone oxidoredu 99.7 5.8E-16 1.3E-20 117.8 13.5 138 2-141 99-242 (323)
120 cd08268 MDR2 Medium chain dehy 99.7 7.5E-16 1.6E-20 117.5 13.7 153 2-156 104-263 (328)
121 cd08272 MDR6 Medium chain dehy 99.7 9.8E-16 2.1E-20 116.8 13.7 135 2-140 104-244 (326)
122 cd08247 AST1_like AST1 is a cy 99.7 2E-15 4.3E-20 117.1 13.8 129 7-137 115-259 (352)
123 cd08273 MDR8 Medium chain dehy 99.7 2.3E-15 5E-20 115.5 13.2 135 2-140 99-236 (331)
124 cd08271 MDR5 Medium chain dehy 99.7 3.9E-15 8.5E-20 113.7 13.8 135 2-139 101-241 (325)
125 cd08267 MDR1 Medium chain dehy 99.7 2.8E-15 6E-20 114.2 12.9 137 2-140 103-243 (319)
126 cd05289 MDR_like_2 alcohol deh 99.6 3.3E-15 7.2E-20 113.0 12.7 136 2-140 104-241 (309)
127 cd08275 MDR3 Medium chain dehy 99.6 4.4E-14 9.5E-19 108.4 12.4 136 2-140 98-239 (337)
128 PRK09424 pntA NAD(P) transhydr 99.5 6.9E-13 1.5E-17 106.6 14.0 115 41-156 163-308 (509)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.8E-12 3.9E-17 101.8 12.8 119 29-157 187-307 (413)
130 PRK05476 S-adenosyl-L-homocyst 99.2 7.1E-10 1.5E-14 87.6 14.1 111 28-146 196-308 (425)
131 PRK08306 dipicolinate synthase 99.2 2.5E-09 5.5E-14 81.3 14.8 118 23-145 132-249 (296)
132 TIGR00561 pntA NAD(P) transhyd 99.1 2.3E-09 4.9E-14 86.3 11.9 100 41-141 162-288 (511)
133 TIGR00936 ahcY adenosylhomocys 99.0 5.5E-09 1.2E-13 82.2 12.0 104 30-141 181-286 (406)
134 PLN02494 adenosylhomocysteinas 99.0 1.1E-08 2.3E-13 81.4 12.1 103 31-141 241-345 (477)
135 TIGR00518 alaDH alanine dehydr 99.0 1.7E-08 3.7E-13 79.0 12.4 100 42-141 166-271 (370)
136 TIGR02853 spore_dpaA dipicolin 98.9 1E-07 2.2E-12 72.2 14.2 100 41-145 149-248 (287)
137 PTZ00075 Adenosylhomocysteinas 98.8 9.5E-08 2.1E-12 76.2 12.2 102 32-141 242-345 (476)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.8 9.1E-08 2E-12 73.4 9.9 108 7-119 140-251 (311)
139 COG4221 Short-chain alcohol de 98.7 2.7E-07 5.9E-12 67.2 11.4 112 42-153 5-155 (246)
140 PF00670 AdoHcyase_NAD: S-aden 98.7 6.9E-07 1.5E-11 61.5 12.5 108 31-146 10-119 (162)
141 PF01488 Shikimate_DH: Shikima 98.6 1.6E-07 3.5E-12 63.3 7.2 97 41-140 10-112 (135)
142 COG0686 Ald Alanine dehydrogen 98.5 6.3E-07 1.4E-11 67.4 8.9 99 43-141 168-272 (371)
143 COG0300 DltE Short-chain dehyd 98.5 1.3E-06 2.8E-11 65.0 10.0 111 41-151 4-156 (265)
144 PRK12771 putative glutamate sy 98.5 1.8E-07 3.9E-12 77.2 5.7 78 40-118 134-234 (564)
145 PRK11873 arsM arsenite S-adeno 98.4 1.4E-06 3E-11 65.6 7.7 100 39-139 74-185 (272)
146 COG2518 Pcm Protein-L-isoaspar 98.4 3.8E-06 8.2E-11 60.2 9.1 99 36-136 66-168 (209)
147 PRK08324 short chain dehydroge 98.4 4.9E-06 1.1E-10 70.3 11.2 99 42-140 421-560 (681)
148 PRK00045 hemA glutamyl-tRNA re 98.3 7.7E-06 1.7E-10 65.4 10.9 74 41-118 180-254 (423)
149 PF12847 Methyltransf_18: Meth 98.3 5.8E-06 1.3E-10 53.5 8.4 93 42-136 1-110 (112)
150 COG1748 LYS9 Saccharopine dehy 98.3 9.6E-06 2.1E-10 63.5 10.8 98 44-141 2-103 (389)
151 PRK11705 cyclopropane fatty ac 98.3 1.3E-05 2.7E-10 63.3 11.4 115 20-137 145-267 (383)
152 PRK06182 short chain dehydroge 98.3 2.2E-05 4.7E-10 58.9 12.0 74 42-116 2-84 (273)
153 PLN03209 translocon at the inn 98.3 1.8E-05 3.9E-10 64.9 12.2 101 40-140 77-210 (576)
154 TIGR01035 hemA glutamyl-tRNA r 98.3 1.3E-05 2.7E-10 64.0 11.1 74 41-118 178-252 (417)
155 PRK05693 short chain dehydroge 98.3 3.3E-05 7.2E-10 57.9 12.9 72 44-116 2-82 (274)
156 PRK00517 prmA ribosomal protei 98.3 1.8E-05 4E-10 58.9 11.2 125 4-140 85-216 (250)
157 KOG1205 Predicted dehydrogenas 98.3 2.6E-05 5.6E-10 58.7 11.8 111 41-151 10-163 (282)
158 PRK05786 fabG 3-ketoacyl-(acyl 98.3 1.8E-05 3.8E-10 58.0 10.9 99 42-140 4-138 (238)
159 PRK00377 cbiT cobalt-precorrin 98.3 2.7E-05 5.8E-10 55.9 11.4 98 38-136 36-144 (198)
160 PF02826 2-Hacid_dh_C: D-isome 98.3 6.8E-06 1.5E-10 58.1 8.2 90 41-138 34-128 (178)
161 COG2242 CobL Precorrin-6B meth 98.3 3.1E-05 6.7E-10 54.5 11.1 99 39-139 31-137 (187)
162 PRK12742 oxidoreductase; Provi 98.3 2.8E-05 6.1E-10 56.9 11.7 100 42-141 5-135 (237)
163 cd01080 NAD_bind_m-THF_DH_Cycl 98.3 3.7E-05 8E-10 53.8 11.5 98 20-140 21-119 (168)
164 cd01065 NAD_bind_Shikimate_DH 98.2 2.9E-05 6.3E-10 53.3 10.9 105 33-140 9-119 (155)
165 PRK05993 short chain dehydroge 98.2 3.4E-05 7.4E-10 58.0 11.8 99 42-141 3-138 (277)
166 cd01078 NAD_bind_H4MPT_DH NADP 98.2 8.8E-05 1.9E-09 53.0 13.1 78 41-118 26-109 (194)
167 KOG1209 1-Acyl dihydroxyaceton 98.2 2.4E-05 5.2E-10 56.2 9.8 110 41-150 5-151 (289)
168 COG2230 Cfa Cyclopropane fatty 98.2 9.4E-06 2E-10 60.9 8.0 113 23-140 53-179 (283)
169 PRK05872 short chain dehydroge 98.2 4.2E-05 9E-10 58.2 11.8 75 42-116 8-95 (296)
170 PRK14175 bifunctional 5,10-met 98.2 4E-05 8.6E-10 57.9 11.3 96 22-140 137-233 (286)
171 PF13460 NAD_binding_10: NADH( 98.2 1.8E-05 3.9E-10 55.7 9.1 91 46-139 1-99 (183)
172 PRK08265 short chain dehydroge 98.2 4.8E-05 1E-09 56.7 11.8 99 42-140 5-139 (261)
173 PRK06139 short chain dehydroge 98.2 5.3E-05 1.2E-09 58.7 12.3 76 41-116 5-94 (330)
174 PRK08339 short chain dehydroge 98.2 8.9E-05 1.9E-09 55.4 12.6 100 42-141 7-147 (263)
175 COG3967 DltE Short-chain dehyd 98.1 1.2E-05 2.7E-10 57.3 7.1 76 42-117 4-89 (245)
176 PRK07109 short chain dehydroge 98.1 9.1E-05 2E-09 57.4 12.3 100 42-141 7-147 (334)
177 PF01135 PCMT: Protein-L-isoas 98.1 1.2E-05 2.7E-10 58.1 7.0 100 36-136 66-171 (209)
178 PRK00258 aroE shikimate 5-dehy 98.1 5.9E-05 1.3E-09 57.0 10.8 96 41-138 121-222 (278)
179 PRK06484 short chain dehydroge 98.1 7.9E-05 1.7E-09 61.0 12.3 100 42-141 268-404 (520)
180 PRK07576 short chain dehydroge 98.1 6.2E-05 1.4E-09 56.2 10.8 76 41-116 7-96 (264)
181 PRK06500 short chain dehydroge 98.1 0.00012 2.5E-09 54.0 12.1 75 42-116 5-90 (249)
182 TIGR01809 Shik-DH-AROM shikima 98.1 4.4E-05 9.5E-10 57.9 10.0 76 42-117 124-201 (282)
183 PRK07825 short chain dehydroge 98.1 0.00013 2.9E-09 54.6 12.3 75 42-116 4-88 (273)
184 PF01262 AlaDh_PNT_C: Alanine 98.1 1.2E-05 2.5E-10 56.3 6.1 98 42-140 19-142 (168)
185 PRK13940 glutamyl-tRNA reducta 98.1 8.4E-05 1.8E-09 59.2 11.2 96 41-140 179-276 (414)
186 TIGR01470 cysG_Nterm siroheme 98.1 5.1E-05 1.1E-09 54.8 9.1 93 42-138 8-101 (205)
187 PRK12548 shikimate 5-dehydroge 98.0 9.5E-05 2.1E-09 56.2 10.9 97 41-137 124-236 (289)
188 PRK06196 oxidoreductase; Provi 98.0 0.00015 3.2E-09 55.6 12.1 75 42-116 25-109 (315)
189 PRK13942 protein-L-isoaspartat 98.0 9.2E-05 2E-09 53.8 10.2 99 36-136 70-175 (212)
190 TIGR00507 aroE shikimate 5-deh 98.0 0.00012 2.7E-09 55.1 11.2 103 33-140 107-217 (270)
191 PRK06718 precorrin-2 dehydroge 98.0 4.8E-05 1E-09 54.9 8.6 106 41-151 8-114 (202)
192 TIGR02469 CbiT precorrin-6Y C5 98.0 0.00022 4.9E-09 46.7 11.2 98 39-137 16-122 (124)
193 PRK12939 short chain dehydroge 98.0 0.00015 3.3E-09 53.3 11.4 76 41-116 5-94 (250)
194 PF02353 CMAS: Mycolic acid cy 98.0 1.5E-05 3.2E-10 60.1 6.0 108 26-137 46-166 (273)
195 TIGR00406 prmA ribosomal prote 98.0 0.00012 2.7E-09 55.6 11.0 97 41-140 158-262 (288)
196 PRK08618 ornithine cyclodeamin 98.0 7.8E-05 1.7E-09 57.6 9.9 101 41-147 125-232 (325)
197 PRK06484 short chain dehydroge 98.0 0.00019 4.2E-09 58.7 12.8 76 41-116 3-89 (520)
198 PRK07062 short chain dehydroge 98.0 0.00021 4.6E-09 53.2 11.9 75 42-116 7-97 (265)
199 COG0169 AroE Shikimate 5-dehyd 98.0 6.2E-05 1.3E-09 56.8 8.9 96 41-137 124-226 (283)
200 PRK06180 short chain dehydroge 98.0 0.00022 4.9E-09 53.6 12.0 76 42-117 3-89 (277)
201 PRK12549 shikimate 5-dehydroge 98.0 6.2E-05 1.4E-09 57.1 8.9 94 41-137 125-227 (284)
202 PRK08261 fabG 3-ketoacyl-(acyl 98.0 0.00016 3.4E-09 58.3 11.7 75 42-116 209-294 (450)
203 PRK07523 gluconate 5-dehydroge 98.0 0.00019 4.2E-09 53.1 11.5 76 42-117 9-98 (255)
204 PRK07326 short chain dehydroge 98.0 0.00018 4E-09 52.5 11.1 75 42-116 5-92 (237)
205 PRK06505 enoyl-(acyl carrier p 98.0 0.00027 5.8E-09 53.2 12.1 99 42-140 6-148 (271)
206 PRK14192 bifunctional 5,10-met 98.0 0.00018 4E-09 54.4 11.2 94 24-140 140-234 (283)
207 PF03435 Saccharop_dh: Sacchar 98.0 7.2E-05 1.6E-09 59.1 9.4 91 46-136 1-97 (386)
208 PRK07814 short chain dehydroge 98.0 0.00024 5.3E-09 52.9 11.8 75 42-116 9-97 (263)
209 PRK07231 fabG 3-ketoacyl-(acyl 98.0 0.00023 5E-09 52.4 11.5 75 42-116 4-91 (251)
210 PF13241 NAD_binding_7: Putati 97.9 3.2E-05 7E-10 49.6 5.9 90 41-140 5-94 (103)
211 CHL00194 ycf39 Ycf39; Provisio 97.9 0.00025 5.5E-09 54.4 11.9 94 45-139 2-111 (317)
212 COG2910 Putative NADH-flavin r 97.9 9.8E-05 2.1E-09 51.8 8.3 90 45-138 2-105 (211)
213 PRK08267 short chain dehydroge 97.9 0.00031 6.7E-09 52.2 11.8 74 44-117 2-88 (260)
214 PRK07060 short chain dehydroge 97.9 0.0001 2.2E-09 54.1 9.1 76 41-116 7-87 (245)
215 PRK13944 protein-L-isoaspartat 97.9 0.00017 3.6E-09 52.1 9.9 99 36-136 66-172 (205)
216 PRK13943 protein-L-isoaspartat 97.9 0.00021 4.6E-09 55.1 10.8 97 38-136 76-179 (322)
217 PRK07832 short chain dehydroge 97.9 0.0005 1.1E-08 51.5 12.8 73 44-116 1-88 (272)
218 PRK04148 hypothetical protein; 97.9 0.00051 1.1E-08 46.0 11.3 112 41-155 15-127 (134)
219 PRK14194 bifunctional 5,10-met 97.9 0.00022 4.7E-09 54.3 10.6 95 22-139 138-233 (301)
220 PF13602 ADH_zinc_N_2: Zinc-bi 97.9 3.9E-06 8.4E-11 55.7 1.1 50 86-138 1-52 (127)
221 COG2264 PrmA Ribosomal protein 97.9 0.00018 3.8E-09 54.6 9.8 129 7-141 131-267 (300)
222 PRK08415 enoyl-(acyl carrier p 97.9 0.00037 8E-09 52.5 11.6 100 42-141 4-147 (274)
223 TIGR00080 pimt protein-L-isoas 97.9 0.00022 4.7E-09 51.9 10.0 98 37-136 72-176 (215)
224 PRK14027 quinate/shikimate deh 97.9 0.0002 4.3E-09 54.3 10.1 76 41-117 125-205 (283)
225 PRK06057 short chain dehydroge 97.9 0.00016 3.6E-09 53.5 9.4 75 42-116 6-89 (255)
226 PLN00203 glutamyl-tRNA reducta 97.9 0.00062 1.4E-08 55.7 13.3 98 42-140 265-372 (519)
227 PRK12829 short chain dehydroge 97.9 0.00015 3.3E-09 53.8 9.2 77 41-117 9-97 (264)
228 PRK12749 quinate/shikimate deh 97.9 0.00041 8.8E-09 52.7 11.4 77 41-117 122-207 (288)
229 PRK10538 malonic semialdehyde 97.9 0.00068 1.5E-08 50.1 12.5 72 45-116 2-84 (248)
230 PRK03369 murD UDP-N-acetylmura 97.9 0.00023 5E-09 58.0 10.7 73 40-117 9-81 (488)
231 PRK06101 short chain dehydroge 97.9 0.00042 9.1E-09 51.0 11.3 73 44-116 2-81 (240)
232 PRK07806 short chain dehydroge 97.9 0.00051 1.1E-08 50.6 11.8 98 42-139 5-136 (248)
233 PRK12367 short chain dehydroge 97.9 0.00017 3.6E-09 53.6 9.1 74 42-116 13-89 (245)
234 PRK09186 flagellin modificatio 97.8 0.0003 6.6E-09 52.0 10.5 74 42-115 3-92 (256)
235 PRK12429 3-hydroxybutyrate deh 97.8 0.00069 1.5E-08 50.0 12.4 75 42-116 3-91 (258)
236 PRK07502 cyclohexadienyl dehyd 97.8 0.00021 4.5E-09 54.8 9.7 93 43-140 6-103 (307)
237 PRK09242 tropinone reductase; 97.8 0.00055 1.2E-08 50.7 11.8 75 42-116 8-98 (257)
238 PRK08263 short chain dehydroge 97.8 0.00054 1.2E-08 51.4 11.8 75 43-117 3-88 (275)
239 PRK08589 short chain dehydroge 97.8 0.00052 1.1E-08 51.5 11.7 74 42-116 5-92 (272)
240 PF03446 NAD_binding_2: NAD bi 97.8 0.00012 2.7E-09 50.8 7.7 90 44-140 2-97 (163)
241 PRK14188 bifunctional 5,10-met 97.8 0.0003 6.4E-09 53.5 10.2 94 22-139 137-232 (296)
242 cd01075 NAD_bind_Leu_Phe_Val_D 97.8 0.00066 1.4E-08 48.9 11.5 80 41-127 26-106 (200)
243 PRK12828 short chain dehydroge 97.8 0.00044 9.6E-09 50.4 10.9 75 42-116 6-92 (239)
244 PRK06603 enoyl-(acyl carrier p 97.8 0.00056 1.2E-08 51.0 11.6 75 42-116 7-96 (260)
245 PRK06200 2,3-dihydroxy-2,3-dih 97.8 0.0002 4.3E-09 53.4 9.1 75 42-116 5-90 (263)
246 KOG1201 Hydroxysteroid 17-beta 97.8 0.00053 1.1E-08 51.7 11.1 76 42-117 37-125 (300)
247 PRK05866 short chain dehydroge 97.8 0.00014 3.1E-09 55.3 8.4 76 42-117 39-128 (293)
248 PRK09072 short chain dehydroge 97.8 0.00054 1.2E-08 51.0 11.4 75 42-116 4-90 (263)
249 PRK07340 ornithine cyclodeamin 97.8 0.00028 6.1E-09 54.1 9.9 100 41-146 123-227 (304)
250 PRK05876 short chain dehydroge 97.8 0.0005 1.1E-08 51.8 11.2 75 42-116 5-93 (275)
251 cd05311 NAD_bind_2_malic_enz N 97.8 0.0014 3.1E-08 48.1 13.2 102 31-139 13-130 (226)
252 PRK06719 precorrin-2 dehydroge 97.8 0.00028 6.1E-09 48.8 9.0 89 41-136 11-99 (157)
253 PF02882 THF_DHG_CYH_C: Tetrah 97.8 0.00038 8.2E-09 48.2 9.5 95 21-138 14-109 (160)
254 PRK13394 3-hydroxybutyrate deh 97.8 0.00057 1.2E-08 50.6 11.3 75 42-116 6-94 (262)
255 TIGR03325 BphB_TodD cis-2,3-di 97.8 0.00027 5.8E-09 52.6 9.4 75 42-116 4-89 (262)
256 PRK06125 short chain dehydroge 97.8 0.00053 1.2E-08 50.9 11.0 75 42-116 6-91 (259)
257 COG0373 HemA Glutamyl-tRNA red 97.8 0.00034 7.4E-09 55.3 10.0 96 41-140 176-277 (414)
258 COG2226 UbiE Methylase involve 97.8 0.00034 7.3E-09 51.5 9.4 102 39-141 48-160 (238)
259 PRK06940 short chain dehydroge 97.8 0.00066 1.4E-08 51.1 11.2 97 43-140 2-128 (275)
260 PRK08594 enoyl-(acyl carrier p 97.8 0.00098 2.1E-08 49.7 11.9 100 42-141 6-151 (257)
261 PRK08085 gluconate 5-dehydroge 97.7 0.0011 2.3E-08 49.1 11.9 75 42-116 8-96 (254)
262 cd05212 NAD_bind_m-THF_DH_Cycl 97.7 0.0013 2.7E-08 44.6 11.1 96 22-140 7-103 (140)
263 PRK07574 formate dehydrogenase 97.7 0.00043 9.4E-09 54.6 10.1 90 42-138 191-285 (385)
264 PLN03139 formate dehydrogenase 97.7 0.00031 6.8E-09 55.4 9.3 90 42-138 198-292 (386)
265 PRK06398 aldose dehydrogenase; 97.7 0.00034 7.3E-09 52.1 9.2 70 42-116 5-82 (258)
266 PRK06079 enoyl-(acyl carrier p 97.7 0.00086 1.9E-08 49.8 11.3 99 42-141 6-147 (252)
267 PRK10792 bifunctional 5,10-met 97.7 0.0007 1.5E-08 51.1 10.6 95 22-139 138-233 (285)
268 PRK07063 short chain dehydroge 97.7 0.00029 6.2E-09 52.4 8.6 75 42-116 6-96 (260)
269 KOG1210 Predicted 3-ketosphing 97.7 0.00028 6.1E-09 53.5 8.3 77 41-117 31-123 (331)
270 PRK07533 enoyl-(acyl carrier p 97.7 0.0011 2.5E-08 49.3 11.7 99 42-140 9-151 (258)
271 PRK14189 bifunctional 5,10-met 97.7 0.00067 1.4E-08 51.3 10.3 95 22-139 137-232 (285)
272 PRK12550 shikimate 5-dehydroge 97.7 0.00048 1E-08 51.9 9.6 77 32-117 112-189 (272)
273 PRK06128 oxidoreductase; Provi 97.7 0.0013 2.8E-08 50.1 12.1 99 42-140 54-194 (300)
274 PRK06197 short chain dehydroge 97.7 0.00068 1.5E-08 51.7 10.5 76 41-116 14-105 (306)
275 PRK08159 enoyl-(acyl carrier p 97.7 0.00099 2.1E-08 50.1 11.2 100 41-140 8-151 (272)
276 PRK12481 2-deoxy-D-gluconate 3 97.7 0.0013 2.8E-08 48.7 11.7 74 42-116 7-93 (251)
277 PRK09291 short chain dehydroge 97.7 0.00047 1E-08 51.0 9.2 74 43-116 2-83 (257)
278 TIGR03840 TMPT_Se_Te thiopurin 97.7 0.00041 8.8E-09 50.4 8.6 96 41-138 33-153 (213)
279 PRK14179 bifunctional 5,10-met 97.7 0.00072 1.6E-08 51.1 10.1 95 22-139 137-232 (284)
280 PRK05562 precorrin-2 dehydroge 97.7 0.00062 1.4E-08 49.7 9.4 92 41-137 23-116 (223)
281 PRK05867 short chain dehydroge 97.7 0.00038 8.1E-09 51.6 8.5 75 42-116 8-96 (253)
282 PRK07370 enoyl-(acyl carrier p 97.7 0.00082 1.8E-08 50.1 10.3 100 42-141 5-151 (258)
283 PRK06949 short chain dehydroge 97.7 0.00039 8.4E-09 51.5 8.5 76 41-116 7-96 (258)
284 PRK07831 short chain dehydroge 97.7 0.00063 1.4E-08 50.6 9.7 76 41-116 15-107 (262)
285 PRK14191 bifunctional 5,10-met 97.7 0.0011 2.5E-08 50.0 10.9 94 22-138 136-230 (285)
286 TIGR01318 gltD_gamma_fam gluta 97.7 0.00025 5.4E-09 57.5 8.0 75 42-117 140-237 (467)
287 PLN00141 Tic62-NAD(P)-related 97.7 0.0015 3.4E-08 48.4 11.7 99 41-139 15-133 (251)
288 PRK07424 bifunctional sterol d 97.6 0.00063 1.4E-08 54.1 9.9 75 42-116 177-255 (406)
289 PRK05717 oxidoreductase; Valid 97.6 0.0006 1.3E-08 50.5 9.4 76 41-116 8-94 (255)
290 TIGR02992 ectoine_eutC ectoine 97.6 0.00057 1.2E-08 52.9 9.4 94 41-139 127-226 (326)
291 PRK12747 short chain dehydroge 97.6 0.0012 2.6E-08 48.8 10.9 100 42-141 3-148 (252)
292 KOG1014 17 beta-hydroxysteroid 97.6 0.00077 1.7E-08 51.1 9.6 111 41-151 47-200 (312)
293 PRK06914 short chain dehydroge 97.6 0.0016 3.4E-08 49.0 11.6 74 43-116 3-91 (280)
294 PRK12809 putative oxidoreducta 97.6 0.00024 5.2E-09 59.8 7.8 75 42-117 309-406 (639)
295 PRK06179 short chain dehydroge 97.6 0.00073 1.6E-08 50.5 9.7 72 42-116 3-83 (270)
296 PRK06194 hypothetical protein; 97.6 0.00048 1E-08 51.9 8.8 76 42-117 5-94 (287)
297 PRK13243 glyoxylate reductase; 97.6 0.00066 1.4E-08 52.7 9.7 88 42-138 149-241 (333)
298 PRK05854 short chain dehydroge 97.6 0.0004 8.6E-09 53.3 8.4 75 42-116 13-103 (313)
299 TIGR02356 adenyl_thiF thiazole 97.6 0.00062 1.4E-08 49.1 8.9 77 42-118 20-123 (202)
300 PLN02253 xanthoxin dehydrogena 97.6 0.00065 1.4E-08 51.1 9.4 75 42-116 17-104 (280)
301 PRK06198 short chain dehydroge 97.6 0.0017 3.7E-08 48.1 11.5 76 41-116 4-94 (260)
302 KOG1610 Corticosteroid 11-beta 97.6 0.0026 5.6E-08 48.4 12.3 106 41-146 27-173 (322)
303 PLN02928 oxidoreductase family 97.6 0.00058 1.3E-08 53.3 9.2 96 41-138 157-263 (347)
304 PRK14178 bifunctional 5,10-met 97.6 0.0011 2.5E-08 49.9 10.3 95 22-139 131-226 (279)
305 PRK12823 benD 1,6-dihydroxycyc 97.6 0.0016 3.5E-08 48.3 11.2 74 42-116 7-94 (260)
306 PRK04457 spermidine synthase; 97.6 0.0023 4.9E-08 48.1 11.9 95 41-136 65-176 (262)
307 PRK07478 short chain dehydroge 97.6 0.00059 1.3E-08 50.5 8.7 75 42-116 5-93 (254)
308 PRK07984 enoyl-(acyl carrier p 97.6 0.0017 3.8E-08 48.5 11.3 75 42-116 5-94 (262)
309 PRK00107 gidB 16S rRNA methylt 97.6 0.0012 2.6E-08 47.1 9.8 95 40-137 43-145 (187)
310 PRK07890 short chain dehydroge 97.6 0.00044 9.6E-09 51.2 8.0 76 41-116 3-92 (258)
311 PF10727 Rossmann-like: Rossma 97.6 0.00049 1.1E-08 45.8 7.3 89 41-136 8-102 (127)
312 PRK07985 oxidoreductase; Provi 97.6 0.0015 3.2E-08 49.7 11.0 100 41-140 47-188 (294)
313 PRK06701 short chain dehydroge 97.6 0.0021 4.6E-08 48.8 11.8 100 41-140 44-184 (290)
314 PRK07453 protochlorophyllide o 97.6 0.00049 1.1E-08 53.0 8.4 74 42-115 5-92 (322)
315 PRK08217 fabG 3-ketoacyl-(acyl 97.6 0.00085 1.8E-08 49.4 9.4 75 42-116 4-92 (253)
316 PF00106 adh_short: short chai 97.6 0.00056 1.2E-08 47.2 8.0 74 44-117 1-91 (167)
317 PRK06841 short chain dehydroge 97.6 0.00073 1.6E-08 49.9 9.1 74 42-116 14-99 (255)
318 PF03807 F420_oxidored: NADP o 97.6 0.0013 2.8E-08 41.3 9.0 86 45-136 1-93 (96)
319 KOG1208 Dehydrogenases with di 97.6 0.0016 3.4E-08 50.2 10.9 101 41-141 33-174 (314)
320 PRK14618 NAD(P)H-dependent gly 97.6 0.00066 1.4E-08 52.5 9.0 91 43-138 4-105 (328)
321 PRK07677 short chain dehydroge 97.6 0.00061 1.3E-08 50.4 8.5 74 43-116 1-88 (252)
322 PRK15469 ghrA bifunctional gly 97.6 0.00082 1.8E-08 51.7 9.3 89 41-138 134-227 (312)
323 TIGR01289 LPOR light-dependent 97.6 0.0017 3.6E-08 49.9 11.1 74 43-116 3-91 (314)
324 COG2227 UbiG 2-polyprenyl-3-me 97.6 0.00055 1.2E-08 50.1 7.8 92 42-137 59-161 (243)
325 PRK06463 fabG 3-ketoacyl-(acyl 97.6 0.0028 6.1E-08 46.9 12.0 74 42-116 6-89 (255)
326 PRK05653 fabG 3-ketoacyl-(acyl 97.6 0.0023 5E-08 46.8 11.3 75 42-116 4-92 (246)
327 PRK14982 acyl-ACP reductase; P 97.6 0.0019 4E-08 50.2 11.1 94 41-140 153-249 (340)
328 PRK07402 precorrin-6B methylas 97.5 0.0043 9.4E-08 44.3 12.4 102 36-138 34-143 (196)
329 PF01210 NAD_Gly3P_dh_N: NAD-d 97.5 0.00073 1.6E-08 46.7 8.1 91 45-136 1-101 (157)
330 PRK14176 bifunctional 5,10-met 97.5 0.0018 3.9E-08 49.0 10.6 96 21-139 142-238 (287)
331 PRK07066 3-hydroxybutyryl-CoA 97.5 0.00075 1.6E-08 52.0 8.8 94 43-137 7-118 (321)
332 PRK08177 short chain dehydroge 97.5 0.00082 1.8E-08 48.9 8.6 72 44-116 2-81 (225)
333 PRK07069 short chain dehydroge 97.5 0.0023 5E-08 47.1 11.1 72 46-117 2-90 (251)
334 PRK00811 spermidine synthase; 97.5 0.0024 5.2E-08 48.5 11.3 96 41-137 75-191 (283)
335 PF05368 NmrA: NmrA-like famil 97.5 0.00082 1.8E-08 49.2 8.6 70 46-116 1-74 (233)
336 TIGR01505 tartro_sem_red 2-hyd 97.5 0.00075 1.6E-08 51.3 8.6 87 45-138 1-94 (291)
337 PRK07791 short chain dehydroge 97.5 0.0046 9.9E-08 46.8 12.8 76 41-116 4-102 (286)
338 PRK08862 short chain dehydroge 97.5 0.001 2.2E-08 48.7 9.0 75 42-116 4-93 (227)
339 PF03721 UDPG_MGDP_dh_N: UDP-g 97.5 0.00038 8.3E-09 49.5 6.4 71 45-117 2-87 (185)
340 PRK14172 bifunctional 5,10-met 97.5 0.002 4.3E-08 48.5 10.5 95 22-139 137-232 (278)
341 PRK08017 oxidoreductase; Provi 97.5 0.0011 2.4E-08 49.0 9.3 72 44-116 3-84 (256)
342 PRK06138 short chain dehydroge 97.5 0.0007 1.5E-08 49.9 8.1 75 42-116 4-91 (252)
343 PRK05565 fabG 3-ketoacyl-(acyl 97.5 0.0024 5.1E-08 46.8 10.9 75 42-116 4-93 (247)
344 PRK11036 putative S-adenosyl-L 97.5 0.0018 3.8E-08 48.3 10.2 94 41-136 43-148 (255)
345 PRK11559 garR tartronate semia 97.5 0.0012 2.6E-08 50.3 9.5 90 44-140 3-99 (296)
346 PRK07024 short chain dehydroge 97.5 0.0012 2.6E-08 49.0 9.3 74 43-116 2-88 (257)
347 PRK12937 short chain dehydroge 97.5 0.003 6.4E-08 46.3 11.3 99 42-140 4-142 (245)
348 PRK07774 short chain dehydroge 97.5 0.00086 1.9E-08 49.4 8.5 75 42-116 5-93 (250)
349 PRK08643 acetoin reductase; Va 97.5 0.00088 1.9E-08 49.6 8.6 74 43-116 2-89 (256)
350 PRK01581 speE spermidine synth 97.5 0.0029 6.3E-08 49.4 11.5 96 41-138 149-269 (374)
351 PRK08340 glucose-1-dehydrogena 97.5 0.00087 1.9E-08 49.8 8.5 72 45-116 2-86 (259)
352 PRK07067 sorbitol dehydrogenas 97.5 0.00092 2E-08 49.6 8.6 75 42-116 5-90 (257)
353 PRK14190 bifunctional 5,10-met 97.5 0.0024 5.1E-08 48.3 10.6 95 22-139 137-232 (284)
354 PRK05875 short chain dehydroge 97.5 0.0012 2.6E-08 49.4 9.3 75 42-116 6-96 (276)
355 PRK05855 short chain dehydroge 97.5 0.0018 3.9E-08 53.5 11.0 75 42-116 314-402 (582)
356 PRK07035 short chain dehydroge 97.5 0.00098 2.1E-08 49.2 8.6 75 42-116 7-95 (252)
357 PRK07417 arogenate dehydrogena 97.5 0.001 2.2E-08 50.4 8.7 89 45-139 2-93 (279)
358 PTZ00098 phosphoethanolamine N 97.5 0.00063 1.4E-08 51.0 7.5 102 36-138 46-157 (263)
359 PRK12475 thiamine/molybdopteri 97.5 0.00081 1.8E-08 52.3 8.2 76 42-118 23-128 (338)
360 PRK08219 short chain dehydroge 97.5 0.0034 7.4E-08 45.4 11.1 74 43-117 3-82 (227)
361 PRK05884 short chain dehydroge 97.5 0.001 2.2E-08 48.5 8.4 71 45-115 2-78 (223)
362 COG1052 LdhA Lactate dehydroge 97.5 0.0013 2.8E-08 50.8 9.2 89 41-138 144-237 (324)
363 COG0499 SAM1 S-adenosylhomocys 97.5 0.0015 3.1E-08 50.6 9.2 105 31-143 196-302 (420)
364 PRK14177 bifunctional 5,10-met 97.5 0.0026 5.7E-08 48.0 10.5 95 22-139 138-233 (284)
365 PRK05650 short chain dehydroge 97.5 0.0032 6.9E-08 47.1 11.2 73 44-116 1-87 (270)
366 PLN02780 ketoreductase/ oxidor 97.5 0.00085 1.8E-08 51.8 8.2 75 42-116 52-142 (320)
367 PRK06482 short chain dehydroge 97.5 0.0017 3.8E-08 48.6 9.8 74 44-117 3-87 (276)
368 PLN03075 nicotianamine synthas 97.5 0.001 2.2E-08 50.6 8.3 97 41-137 122-233 (296)
369 COG2519 GCD14 tRNA(1-methylade 97.4 0.0021 4.6E-08 47.4 9.6 101 38-139 90-197 (256)
370 PRK08213 gluconate 5-dehydroge 97.4 0.0012 2.7E-08 48.9 8.7 75 42-116 11-99 (259)
371 COG1648 CysG Siroheme synthase 97.4 0.0014 3.1E-08 47.4 8.6 107 41-151 10-117 (210)
372 PRK07904 short chain dehydroge 97.4 0.0013 2.9E-08 48.8 8.8 78 40-117 5-98 (253)
373 TIGR00872 gnd_rel 6-phosphoglu 97.4 0.0029 6.2E-08 48.4 10.7 90 45-139 2-95 (298)
374 PRK07577 short chain dehydroge 97.4 0.0031 6.7E-08 45.9 10.5 69 42-116 2-78 (234)
375 PRK12936 3-ketoacyl-(acyl-carr 97.4 0.0019 4.1E-08 47.3 9.4 75 42-116 5-90 (245)
376 PRK08291 ectoine utilization p 97.4 0.002 4.4E-08 49.9 9.9 94 41-139 130-229 (330)
377 PRK12746 short chain dehydroge 97.4 0.0033 7.1E-08 46.4 10.7 75 42-116 5-100 (254)
378 TIGR03589 PseB UDP-N-acetylglu 97.4 0.0018 4E-08 49.9 9.6 75 42-116 3-84 (324)
379 PRK06141 ornithine cyclodeamin 97.4 0.0066 1.4E-07 46.8 12.6 95 41-140 123-222 (314)
380 PRK06172 short chain dehydroge 97.4 0.0013 2.8E-08 48.6 8.4 75 42-116 6-94 (253)
381 PLN02366 spermidine synthase 97.4 0.0029 6.3E-08 48.6 10.5 96 41-137 90-206 (308)
382 PRK14967 putative methyltransf 97.4 0.0028 6.1E-08 46.3 10.1 94 40-137 34-159 (223)
383 PRK14169 bifunctional 5,10-met 97.4 0.0034 7.3E-08 47.4 10.6 95 22-139 135-230 (282)
384 PRK07666 fabG 3-ketoacyl-(acyl 97.4 0.0012 2.6E-08 48.3 8.2 76 42-117 6-95 (239)
385 PRK06181 short chain dehydroge 97.4 0.0013 2.8E-08 48.9 8.4 74 43-116 1-88 (263)
386 TIGR00417 speE spermidine synt 97.4 0.0039 8.5E-08 47.0 11.0 96 41-137 71-186 (270)
387 COG2084 MmsB 3-hydroxyisobutyr 97.4 0.0018 3.9E-08 49.0 9.0 90 45-141 2-99 (286)
388 PRK13255 thiopurine S-methyltr 97.4 0.0014 3.1E-08 47.8 8.3 93 41-135 36-153 (218)
389 PRK14173 bifunctional 5,10-met 97.4 0.0033 7.2E-08 47.6 10.4 95 22-139 134-229 (287)
390 PRK12938 acetyacetyl-CoA reduc 97.4 0.0061 1.3E-07 44.8 11.8 76 42-117 2-92 (246)
391 PRK08655 prephenate dehydrogen 97.4 0.0019 4.1E-08 52.0 9.6 88 45-138 2-93 (437)
392 PRK06483 dihydromonapterin red 97.4 0.0017 3.8E-08 47.4 8.8 74 43-116 2-84 (236)
393 PRK07856 short chain dehydroge 97.4 0.0029 6.3E-08 46.8 10.0 70 42-116 5-85 (252)
394 PRK14166 bifunctional 5,10-met 97.4 0.0038 8.2E-08 47.2 10.5 95 22-139 136-231 (282)
395 PRK08644 thiamine biosynthesis 97.4 0.0013 2.8E-08 47.8 7.9 78 42-119 27-130 (212)
396 PRK06124 gluconate 5-dehydroge 97.4 0.0016 3.4E-08 48.2 8.6 76 41-116 9-98 (256)
397 PRK07454 short chain dehydroge 97.4 0.0015 3.3E-08 47.8 8.5 76 41-116 4-93 (241)
398 PRK11207 tellurite resistance 97.4 0.00097 2.1E-08 47.8 7.1 93 41-136 29-133 (197)
399 TIGR01832 kduD 2-deoxy-D-gluco 97.4 0.0018 3.9E-08 47.7 8.8 74 42-116 4-90 (248)
400 TIGR00438 rrmJ cell division p 97.4 0.0077 1.7E-07 42.8 11.7 98 35-137 25-146 (188)
401 PRK12826 3-ketoacyl-(acyl-carr 97.4 0.0016 3.4E-08 47.9 8.4 76 42-117 5-94 (251)
402 PRK08936 glucose-1-dehydrogena 97.4 0.0063 1.4E-07 45.2 11.7 76 41-116 5-95 (261)
403 PRK00312 pcm protein-L-isoaspa 97.4 0.0031 6.7E-08 45.7 9.8 98 37-137 73-175 (212)
404 PLN02989 cinnamyl-alcohol dehy 97.4 0.0016 3.5E-08 50.0 8.7 75 42-116 4-87 (325)
405 PRK08277 D-mannonate oxidoredu 97.4 0.0017 3.7E-08 48.7 8.7 75 42-116 9-97 (278)
406 PRK14186 bifunctional 5,10-met 97.4 0.004 8.7E-08 47.4 10.5 95 22-139 137-232 (297)
407 PLN02516 methylenetetrahydrofo 97.4 0.0039 8.5E-08 47.4 10.5 96 21-139 145-241 (299)
408 PRK01438 murD UDP-N-acetylmura 97.4 0.0035 7.6E-08 51.0 11.0 71 41-117 14-89 (480)
409 PRK06720 hypothetical protein; 97.4 0.002 4.4E-08 45.1 8.5 76 42-117 15-104 (169)
410 PRK08251 short chain dehydroge 97.4 0.0017 3.8E-08 47.7 8.5 74 43-116 2-91 (248)
411 PRK14180 bifunctional 5,10-met 97.3 0.0043 9.3E-08 46.9 10.5 96 21-139 136-232 (282)
412 PRK12480 D-lactate dehydrogena 97.3 0.0022 4.8E-08 49.7 9.3 86 42-138 145-235 (330)
413 PRK11064 wecC UDP-N-acetyl-D-m 97.3 0.0034 7.3E-08 50.2 10.6 95 44-140 4-122 (415)
414 PRK14170 bifunctional 5,10-met 97.3 0.0042 9.1E-08 46.9 10.4 95 22-139 136-231 (284)
415 KOG4169 15-hydroxyprostaglandi 97.3 0.0033 7.2E-08 45.8 9.4 113 42-155 4-154 (261)
416 PRK15461 NADH-dependent gamma- 97.3 0.0025 5.4E-08 48.7 9.4 90 44-140 2-98 (296)
417 PRK12769 putative oxidoreducta 97.3 0.0012 2.5E-08 55.9 8.2 76 41-117 325-423 (654)
418 PRK12743 oxidoreductase; Provi 97.3 0.0055 1.2E-07 45.4 11.1 74 43-116 2-90 (256)
419 PRK06935 2-deoxy-D-gluconate 3 97.3 0.0019 4.1E-08 47.9 8.6 75 41-116 13-101 (258)
420 PRK08703 short chain dehydroge 97.3 0.0025 5.5E-08 46.6 9.2 75 42-116 5-97 (239)
421 PRK14187 bifunctional 5,10-met 97.3 0.0044 9.6E-08 47.0 10.4 96 21-139 138-234 (294)
422 PRK14171 bifunctional 5,10-met 97.3 0.0045 9.7E-08 46.9 10.4 95 22-139 138-233 (288)
423 TIGR02622 CDP_4_6_dhtase CDP-g 97.3 0.0022 4.8E-08 49.9 9.2 75 42-116 3-85 (349)
424 cd01487 E1_ThiF_like E1_ThiF_l 97.3 0.0027 5.8E-08 44.7 8.8 93 45-137 1-120 (174)
425 PRK08410 2-hydroxyacid dehydro 97.3 0.0023 5.1E-08 49.2 9.1 35 42-76 144-178 (311)
426 PLN02781 Probable caffeoyl-CoA 97.3 0.0044 9.6E-08 45.7 10.3 97 40-137 66-178 (234)
427 PRK14182 bifunctional 5,10-met 97.3 0.0047 1E-07 46.6 10.5 95 22-139 136-231 (282)
428 PLN02730 enoyl-[acyl-carrier-p 97.3 0.0036 7.9E-08 48.0 10.1 42 41-83 7-51 (303)
429 PRK08762 molybdopterin biosynt 97.3 0.0031 6.7E-08 49.8 10.0 77 42-118 134-237 (376)
430 PRK14183 bifunctional 5,10-met 97.3 0.0045 9.9E-08 46.7 10.3 95 22-139 136-231 (281)
431 PRK13403 ketol-acid reductoiso 97.3 0.0032 6.9E-08 48.4 9.6 88 41-136 14-105 (335)
432 PLN02244 tocopherol O-methyltr 97.3 0.0026 5.7E-08 49.5 9.4 95 41-137 117-223 (340)
433 PRK01683 trans-aconitate 2-met 97.3 0.0043 9.4E-08 46.2 10.3 96 39-137 28-130 (258)
434 PF00899 ThiF: ThiF family; I 97.3 0.0033 7.2E-08 42.2 8.8 95 43-137 2-124 (135)
435 PRK07097 gluconate 5-dehydroge 97.3 0.0021 4.6E-08 47.9 8.6 75 42-116 9-97 (265)
436 PRK06077 fabG 3-ketoacyl-(acyl 97.3 0.011 2.3E-07 43.5 12.3 99 42-141 5-144 (252)
437 PRK06522 2-dehydropantoate 2-r 97.3 0.0027 5.9E-08 48.3 9.3 90 45-137 2-100 (304)
438 PRK08317 hypothetical protein; 97.3 0.0031 6.8E-08 46.0 9.3 100 36-137 13-124 (241)
439 PRK08628 short chain dehydroge 97.3 0.0032 7E-08 46.6 9.4 76 41-116 5-93 (258)
440 TIGR01327 PGDH D-3-phosphoglyc 97.3 0.0028 6E-08 52.2 9.8 90 42-139 137-231 (525)
441 PLN02476 O-methyltransferase 97.3 0.0053 1.1E-07 46.4 10.4 97 40-137 116-228 (278)
442 PLN02214 cinnamoyl-CoA reducta 97.3 0.0085 1.8E-07 46.6 12.0 97 41-138 8-127 (342)
443 PLN02897 tetrahydrofolate dehy 97.3 0.0047 1E-07 47.8 10.2 95 22-139 193-288 (345)
444 PLN02986 cinnamyl-alcohol dehy 97.3 0.0027 5.9E-08 48.7 9.1 75 42-116 4-87 (322)
445 cd01079 NAD_bind_m-THF_DH NAD 97.3 0.0065 1.4E-07 43.3 10.1 111 21-139 31-158 (197)
446 PRK13581 D-3-phosphoglycerate 97.3 0.0037 8.1E-08 51.5 10.3 89 42-139 139-232 (526)
447 TIGR01963 PHB_DH 3-hydroxybuty 97.3 0.0027 5.9E-08 46.8 8.8 74 43-116 1-88 (255)
448 PRK14106 murD UDP-N-acetylmura 97.3 0.0036 7.8E-08 50.5 10.0 71 42-117 4-79 (450)
449 PRK10637 cysG siroheme synthas 97.3 0.003 6.6E-08 51.1 9.5 107 41-151 10-117 (457)
450 COG1179 Dinucleotide-utilizing 97.3 0.0037 7.9E-08 45.9 8.9 99 42-140 29-156 (263)
451 PRK10258 biotin biosynthesis p 97.3 0.0028 6.1E-08 47.1 8.7 96 41-139 41-142 (251)
452 PRK09310 aroDE bifunctional 3- 97.3 0.0049 1.1E-07 50.2 10.7 73 41-118 330-402 (477)
453 PLN02616 tetrahydrofolate dehy 97.2 0.0051 1.1E-07 47.9 10.2 95 22-139 210-305 (364)
454 PRK00094 gpsA NAD(P)H-dependen 97.2 0.0026 5.7E-08 48.9 8.8 91 45-137 3-105 (325)
455 PRK12490 6-phosphogluconate de 97.2 0.0062 1.3E-07 46.6 10.7 92 45-140 2-97 (299)
456 PRK05557 fabG 3-ketoacyl-(acyl 97.2 0.012 2.5E-07 43.0 11.9 75 42-116 4-93 (248)
457 PRK08220 2,3-dihydroxybenzoate 97.2 0.0089 1.9E-07 44.0 11.2 70 42-117 7-87 (252)
458 PLN02819 lysine-ketoglutarate 97.2 0.0056 1.2E-07 54.0 11.4 90 42-131 568-673 (1042)
459 TIGR02354 thiF_fam2 thiamine b 97.2 0.0024 5.1E-08 46.0 7.8 34 42-75 20-54 (200)
460 PRK08293 3-hydroxybutyryl-CoA 97.2 0.0069 1.5E-07 46.0 10.8 41 44-84 4-44 (287)
461 COG0287 TyrA Prephenate dehydr 97.2 0.0042 9.1E-08 47.0 9.5 93 43-140 3-101 (279)
462 PRK03612 spermidine synthase; 97.2 0.0051 1.1E-07 50.7 10.7 96 41-137 296-415 (521)
463 PLN02896 cinnamyl-alcohol dehy 97.2 0.0038 8.2E-08 48.6 9.6 76 41-116 8-89 (353)
464 PRK07688 thiamine/molybdopteri 97.2 0.0021 4.5E-08 50.0 8.0 77 42-118 23-128 (339)
465 PRK14184 bifunctional 5,10-met 97.2 0.0056 1.2E-07 46.4 10.0 95 22-139 136-235 (286)
466 PRK07074 short chain dehydroge 97.2 0.0034 7.3E-08 46.5 8.9 74 43-116 2-87 (257)
467 cd05291 HicDH_like L-2-hydroxy 97.2 0.009 1.9E-07 45.9 11.4 92 45-140 2-120 (306)
468 PRK09260 3-hydroxybutyryl-CoA 97.2 0.0022 4.9E-08 48.7 8.0 75 44-118 2-93 (288)
469 PF06325 PrmA: Ribosomal prote 97.2 0.00089 1.9E-08 51.0 5.7 124 7-141 130-263 (295)
470 KOG0725 Reductases with broad 97.2 0.0033 7.1E-08 47.4 8.7 77 41-117 6-100 (270)
471 PRK06436 glycerate dehydrogena 97.2 0.0042 9.2E-08 47.6 9.4 85 42-138 121-210 (303)
472 PLN02233 ubiquinone biosynthes 97.2 0.0049 1.1E-07 46.2 9.5 99 39-139 70-184 (261)
473 PRK08226 short chain dehydroge 97.2 0.0039 8.4E-08 46.3 9.0 75 42-116 5-92 (263)
474 PRK08945 putative oxoacyl-(acy 97.2 0.0037 8E-08 46.0 8.8 76 41-116 10-102 (247)
475 PRK15409 bifunctional glyoxyla 97.2 0.0037 8E-08 48.3 9.0 87 42-137 144-236 (323)
476 PRK14193 bifunctional 5,10-met 97.2 0.0074 1.6E-07 45.7 10.3 96 22-140 137-235 (284)
477 PRK06114 short chain dehydroge 97.2 0.0038 8.3E-08 46.2 8.9 75 42-116 7-96 (254)
478 PRK14181 bifunctional 5,10-met 97.2 0.008 1.7E-07 45.5 10.5 96 21-139 131-231 (287)
479 TIGR02355 moeB molybdopterin s 97.2 0.0026 5.7E-08 47.1 7.8 81 42-124 23-131 (240)
480 COG4122 Predicted O-methyltran 97.2 0.0039 8.4E-08 45.4 8.5 97 41-138 58-167 (219)
481 PRK06113 7-alpha-hydroxysteroi 97.2 0.003 6.4E-08 46.8 8.2 75 42-116 10-98 (255)
482 PLN00015 protochlorophyllide r 97.2 0.0068 1.5E-07 46.4 10.4 70 47-116 1-85 (308)
483 PRK12921 2-dehydropantoate 2-r 97.2 0.005 1.1E-07 46.9 9.6 89 45-136 2-101 (305)
484 PRK07578 short chain dehydroge 97.2 0.011 2.4E-07 42.0 10.9 84 45-140 2-114 (199)
485 PRK04266 fibrillarin; Provisio 97.2 0.0079 1.7E-07 44.2 10.2 98 38-136 68-175 (226)
486 TIGR00477 tehB tellurite resis 97.2 0.0038 8.3E-08 44.7 8.4 93 41-136 29-132 (195)
487 PRK11880 pyrroline-5-carboxyla 97.2 0.0042 9.2E-08 46.5 9.0 86 44-136 3-93 (267)
488 PLN02520 bifunctional 3-dehydr 97.2 0.0028 6E-08 52.3 8.5 94 41-137 377-475 (529)
489 TIGR03206 benzo_BadH 2-hydroxy 97.2 0.0032 7E-08 46.2 8.2 75 42-116 2-90 (250)
490 TIGR03466 HpnA hopanoid-associ 97.2 0.0019 4.1E-08 49.4 7.2 71 45-116 2-74 (328)
491 PRK08303 short chain dehydroge 97.2 0.0036 7.7E-08 48.0 8.6 74 42-115 7-105 (305)
492 PRK06046 alanine dehydrogenase 97.2 0.0054 1.2E-07 47.5 9.6 100 41-146 127-233 (326)
493 PRK12384 sorbitol-6-phosphate 97.1 0.0034 7.3E-08 46.5 8.2 74 43-116 2-91 (259)
494 PRK08264 short chain dehydroge 97.1 0.0037 8E-08 45.7 8.3 71 42-116 5-83 (238)
495 PRK06953 short chain dehydroge 97.1 0.0035 7.5E-08 45.5 8.1 72 44-116 2-80 (222)
496 COG0569 TrkA K+ transport syst 97.1 0.0065 1.4E-07 44.6 9.4 82 45-127 2-86 (225)
497 PRK15116 sulfur acceptor prote 97.1 0.0075 1.6E-07 45.4 9.9 99 42-140 29-156 (268)
498 PRK06932 glycerate dehydrogena 97.1 0.0021 4.5E-08 49.6 7.1 34 42-75 146-179 (314)
499 PRK14167 bifunctional 5,10-met 97.1 0.0087 1.9E-07 45.6 10.2 95 22-139 136-235 (297)
500 PRK07775 short chain dehydroge 97.1 0.0061 1.3E-07 45.8 9.5 77 41-117 8-98 (274)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.96 E-value=7.3e-30 Score=192.97 Aligned_cols=166 Identities=46% Similarity=0.673 Sum_probs=149.5
Q ss_pred CccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 1 v~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++|+++++++|+++++++||++.|++.|.|+++..... ++|++|+|.|.|++|.+++|+++++|++|++++++++|++
T Consensus 126 v~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e 204 (339)
T COG1064 126 VVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLE 204 (339)
T ss_pred EEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHH
Confidence 468899999999999999999999999999999988554 9999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CC-cccCccccccCcccce
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KP-LELPAFPLLTGEEEDS 158 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~~~ 158 (173)
.+++ +|++++++.++.+..+.+.+.+|++|++++ +..++.+++.|+++|+++.+|... +. ..++.+.+..+++.
T Consensus 205 ~a~~-lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~-- 280 (339)
T COG1064 205 LAKK-LGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEIS-- 280 (339)
T ss_pred HHHH-hCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeE--
Confidence 9999 999999998777777766667999999999 768999999999999999999884 43 56888889999988
Q ss_pred eeeccccccCCCC
Q 030694 159 WWQSHWGVEGDSR 171 (173)
Q Consensus 159 ~~~~~~~~~~~~~ 171 (173)
+.++..+++.|.+
T Consensus 281 i~GS~~g~~~d~~ 293 (339)
T COG1064 281 IVGSLVGTRADLE 293 (339)
T ss_pred EEEEecCCHHHHH
Confidence 6788777776653
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.95 E-value=3.1e-27 Score=181.02 Aligned_cols=160 Identities=31% Similarity=0.434 Sum_probs=137.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|+++++++|+++|+++||+++++++|||+++.....+++|++|||+|+ |++|+.++|+++.+|++++++..++++.+
T Consensus 102 ~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~ 181 (326)
T COG0604 102 VVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE 181 (326)
T ss_pred EecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH
Confidence 57899999999999999999999999999999999888899999999997 99999999999999988888888888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc---C--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM---G--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~---~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
.+++ +|+++++++.+.++.+++. + ++|++||++|+. .+..++.+|+++|+++.+|..++ ...++...++.+
T Consensus 182 ~~~~-lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~ 259 (326)
T COG0604 182 LLKE-LGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGK 259 (326)
T ss_pred HHHh-cCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhc
Confidence 7777 9999999998876555543 2 799999999999 68899999999999999998763 445666667666
Q ss_pred cccceeeecc
Q 030694 154 EEEDSWWQSH 163 (173)
Q Consensus 154 ~~~~~~~~~~ 163 (173)
.....++..+
T Consensus 260 ~~~~~g~~~~ 269 (326)
T COG0604 260 RLTLRGVTLG 269 (326)
T ss_pred cEEEEEecce
Confidence 6664444443
No 3
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=4.3e-26 Score=168.71 Aligned_cols=168 Identities=60% Similarity=0.921 Sum_probs=149.4
Q ss_pred CccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 1 MVADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 1 v~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++++.+++++|+++++++||++.|++.|+|..|.+..- .+|+++-|.|+|++|.+++|+++++|.+|+++++++.+.+
T Consensus 141 ~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kke 219 (360)
T KOG0023|consen 141 AVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKE 219 (360)
T ss_pred EEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHH
Confidence 367889999999999999999999999999999988776 7999999999977999999999999999999999997767
Q ss_pred HHHHHcCCCEEeeCC-ChHHHHHhcCCccEEEEcCC--CccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSR-DQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~-~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
++-+.+|++..++.. +.++++++.+-.|.+++++. ....++.++.+++++|+++++|.+.++..++.+++..+.+.
T Consensus 220 ea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~- 298 (360)
T KOG0023|consen 220 EAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKS- 298 (360)
T ss_pred HHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEE-
Confidence 666669999888887 78888888877777777777 66679999999999999999999888889999999999987
Q ss_pred eeeeccccccCCCC
Q 030694 158 SWWQSHWGVEGDSR 171 (173)
Q Consensus 158 ~~~~~~~~~~~~~~ 171 (173)
+.+++.+++.|.+
T Consensus 299 -I~GS~vG~~ket~ 311 (360)
T KOG0023|consen 299 -IKGSIVGSRKETQ 311 (360)
T ss_pred -EEeeccccHHHHH
Confidence 7788888877654
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=7.3e-25 Score=162.47 Aligned_cols=161 Identities=22% Similarity=0.262 Sum_probs=137.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+.++++++++|+++|+|++|.+ ..++.+|+|+++... +.|++|||+|+|++|+++...|++.|+ +|++++..++|++
T Consensus 131 ~~~~dfc~KLPd~vs~eeGAl~-ePLsV~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle 208 (354)
T KOG0024|consen 131 VHPADFCYKLPDNVSFEEGALI-EPLSVGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLE 208 (354)
T ss_pred EechHheeeCCCCCchhhcccc-cchhhhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHH
Confidence 5688999999999999998744 458888999987665 999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCCh---HHHHHh----cC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 81 EAVERLGADSFLVSRDQ---DEMQAA----MG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~---~~~~~~----~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+++ +|++.+.+.... +.+.+. .+ .+|+.|||.|....++.++..++.+|+++..|...+..++|..+..
T Consensus 209 ~Ak~-~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~ 287 (354)
T KOG0024|consen 209 LAKK-FGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVA 287 (354)
T ss_pred HHHH-hCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhh
Confidence 9999 999877655542 222222 22 5999999999998899999999999999999988888999999999
Q ss_pred cCcccceeeecccc
Q 030694 152 TGEEEDSWWQSHWG 165 (173)
Q Consensus 152 ~~~~~~~~~~~~~~ 165 (173)
.+++.....+.|..
T Consensus 288 ~kE~~~~g~fry~~ 301 (354)
T KOG0024|consen 288 LKEVDLRGSFRYCN 301 (354)
T ss_pred hheeeeeeeeeecc
Confidence 99998666555544
No 5
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.93 E-value=1.1e-24 Score=156.78 Aligned_cols=153 Identities=25% Similarity=0.306 Sum_probs=138.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|...++++|+.++++++|++...++|||..+++...+++|++||++.+ |++|++++|+++..|++++.+.++.+|++
T Consensus 106 ~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~ 185 (336)
T KOG1197|consen 106 TVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHE 185 (336)
T ss_pred cccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHH
Confidence 57888999999999999999999999999999999999999999999987 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcC-----CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMG-----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~-----~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ .|+++.|+++..+..+++.. |+|+++|.+|.. ++...+.+|++.|.++.+|+.++. -++++..+--+.
T Consensus 186 ~ake-nG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~ 263 (336)
T KOG1197|consen 186 IAKE-NGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKA 263 (336)
T ss_pred HHHh-cCCcceeeccchhHHHHHHhccCCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhh
Confidence 9999 99999999999888777642 899999999999 699999999999999999987764 356666665555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
++
T Consensus 264 l~ 265 (336)
T KOG1197|consen 264 LQ 265 (336)
T ss_pred hh
Confidence 53
No 6
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.92 E-value=1.1e-24 Score=169.44 Aligned_cols=155 Identities=68% Similarity=1.132 Sum_probs=131.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|++.++++|+++++++++++++++.|+|+++.....+++|++|+|.|+|++|++++|+++.+|++|++++.+++++..
T Consensus 143 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~ 222 (360)
T PLN02586 143 VVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDE 222 (360)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhh
Confidence 56788999999999999999999999999999987766689999999999999999999999999999988887777655
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+.+++|+++++++.+.+.+.+..+++|++||++|....+..++++++++|+++.+|...+...++...++.++..
T Consensus 223 ~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~ 297 (360)
T PLN02586 223 AINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKL 297 (360)
T ss_pred HHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeE
Confidence 544499999988766544555556899999999987678899999999999999997655566777777777655
No 7
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.92 E-value=2.7e-24 Score=162.07 Aligned_cols=161 Identities=24% Similarity=0.244 Sum_probs=133.5
Q ss_pred ccccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
++|++ .++++|+++++++++++++++.|+|+++.+... .++++|+|+|+|++|++++|+++.+|++ |++++++++|+
T Consensus 80 ~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 80 HLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred EecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 56776 699999999999999999999999999977665 6899999999999999999999999996 88888899999
Q ss_pred HHHHHHcCCCEEeeCCCh-HHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQ-DEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~-~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++.+. +...+.. .++|++||++|.+..++.++++++++|+++.+|... ...+++...++.++
T Consensus 159 ~~a~~-~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~ 237 (280)
T TIGR03366 159 ELALS-FGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRW 237 (280)
T ss_pred HHHHH-cCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCC
Confidence 99988 999988876543 2223332 379999999998877899999999999999999653 34577888888888
Q ss_pred ccceeeeccccc
Q 030694 155 EEDSWWQSHWGV 166 (173)
Q Consensus 155 ~~~~~~~~~~~~ 166 (173)
.+ +.+++..+
T Consensus 238 ~~--i~g~~~~~ 247 (280)
T TIGR03366 238 LT--IRGVHNYE 247 (280)
T ss_pred cE--EEecCCCC
Confidence 87 44444433
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.92 E-value=9.3e-24 Score=164.92 Aligned_cols=155 Identities=29% Similarity=0.394 Sum_probs=133.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|+++++++|+++++++++.+++++.|||+++.....++++++|+|.|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 151 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~ 230 (371)
T cd08281 151 VVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLA 230 (371)
T ss_pred EecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 567889999999999999999999999999998776777999999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~ 154 (173)
.+++ +|++.++++.+.+..+++. +++|++|||+|....+..++++++++|+++.+|...+ ..+++...++.++
T Consensus 231 ~a~~-~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~ 309 (371)
T cd08281 231 LARE-LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEE 309 (371)
T ss_pred HHHH-cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcC
Confidence 9988 9999999887655443332 3799999999987678999999999999999997643 3467777777787
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 310 ~~i 312 (371)
T cd08281 310 RTL 312 (371)
T ss_pred CEE
Confidence 763
No 9
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.91 E-value=8e-24 Score=164.54 Aligned_cols=162 Identities=52% Similarity=0.854 Sum_probs=135.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++++++++.|||+++......++|++++|+|+|++|++++|+++.+|++|++++++++++..
T Consensus 140 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~ 219 (357)
T PLN02514 140 VVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREE 219 (357)
T ss_pred EEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999987776689999999988999999999999999999999988888777
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccceeee
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSWWQ 161 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 161 (173)
+.+.+|++.++++.+.+.+.+...++|++|||+|....+..++++++++|+++.+|...+..+++...++.++.+ +.+
T Consensus 220 ~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~--i~g 297 (357)
T PLN02514 220 ALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKV--ITG 297 (357)
T ss_pred HHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcE--EEE
Confidence 765699988877665544444556899999999976678899999999999999997765556777777777775 334
Q ss_pred cccc
Q 030694 162 SHWG 165 (173)
Q Consensus 162 ~~~~ 165 (173)
++..
T Consensus 298 ~~~~ 301 (357)
T PLN02514 298 SFIG 301 (357)
T ss_pred EecC
Confidence 4433
No 10
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.91 E-value=9.3e-24 Score=165.08 Aligned_cols=155 Identities=60% Similarity=1.001 Sum_probs=130.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch-H
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-K 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~-~ 79 (173)
++|++.++++|+++++++++++++++.|+|+++..... .+++++|+|.|+|++|++++|+++.+|++|++++.++++ .
T Consensus 137 ~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~ 216 (375)
T PLN02178 137 VVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKER 216 (375)
T ss_pred EEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhH
Confidence 56788999999999999999999999999999876653 268999999999999999999999999999999887665 5
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
+.+++ +|+++++++.+.+.+.+..+++|++|||+|.+..+..++++++++|+++.+|...+...++...++.++..+
T Consensus 217 ~~a~~-lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i 293 (375)
T PLN02178 217 EAIDR-LGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMV 293 (375)
T ss_pred HHHHh-CCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEE
Confidence 66666 999999887654444444457999999999886788999999999999999976555667777787777763
No 11
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.91 E-value=2.9e-23 Score=160.60 Aligned_cols=153 Identities=23% Similarity=0.290 Sum_probs=128.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|++.++++|+++++++++ +...+.+||+++.+... .++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 131 ~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~ 208 (343)
T PRK09880 131 VVDTAQCIPYPEKADEKVMA-FAEPLAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLS 208 (343)
T ss_pred EechHHeEECCCCCCHHHHH-hhcHHHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHH
Confidence 56788999999999987644 56677899999987665 689999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh--cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA--MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
.+++ +|+++++++.+.+..+.. .+++|++|||+|.+..++.++++++++|+++.+|......+++...++.++..+
T Consensus 209 ~a~~-lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i 286 (343)
T PRK09880 209 LARE-MGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISL 286 (343)
T ss_pred HHHH-cCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEE
Confidence 9998 999999988764432211 236999999999876788999999999999999976555677777777777763
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.90 E-value=3.7e-23 Score=160.81 Aligned_cols=154 Identities=25% Similarity=0.307 Sum_probs=130.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|+++++++|+++++++++.+++.+.|||+++.....++++++|+|+|+|++|++++|+++..|+ +|++++++++|++
T Consensus 136 ~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~ 215 (358)
T TIGR03451 136 LVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLE 215 (358)
T ss_pred EEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467789999999999999999999999999988777777999999999999999999999999999 5999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC--cccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~ 153 (173)
.+++ +|+++++++.+.+..+. ..+ ++|++|||+|++..+..++++++++|+++.+|...+. ..++...++.+
T Consensus 216 ~~~~-~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 294 (358)
T TIGR03451 216 WARE-FGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGR 294 (358)
T ss_pred HHHH-cCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhc
Confidence 9988 99999998876544333 222 7999999999876789999999999999999976542 45666667777
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 295 ~~~ 297 (358)
T TIGR03451 295 GGA 297 (358)
T ss_pred CCE
Confidence 665
No 13
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.90 E-value=2.1e-23 Score=160.95 Aligned_cols=152 Identities=28% Similarity=0.376 Sum_probs=126.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+++++.|||+++.... +++|++|+|+|+|++|++++|+++.+|++ |++++++++|++
T Consensus 124 ~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~ 202 (339)
T cd08239 124 LVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLE 202 (339)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 5678899999999999999999999999999997655 48899999999999999999999999998 999999999999
Q ss_pred HHHHHcCCCEEeeCCChH--HHHHhc-C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc-cccccCcc
Q 030694 81 EAVERLGADSFLVSRDQD--EMQAAM-G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA-FPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~ 155 (173)
.+++ +|++.++++.+.+ .+.+.. + ++|++|||+|+...+..++++++++|+++.+|...+ ..++. ..++.++.
T Consensus 203 ~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~ 280 (339)
T cd08239 203 LAKA-LGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-LTIEVSNDLIRKQR 280 (339)
T ss_pred HHHH-hCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-cccCcHHHHHhCCC
Confidence 9988 9999999887644 122222 2 799999999998666889999999999999997543 23443 34556666
Q ss_pred c
Q 030694 156 E 156 (173)
Q Consensus 156 ~ 156 (173)
.
T Consensus 281 ~ 281 (339)
T cd08239 281 T 281 (339)
T ss_pred E
Confidence 5
No 14
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=1.8e-22 Score=149.10 Aligned_cols=167 Identities=26% Similarity=0.377 Sum_probs=145.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+++...+.++++..++++++.|.|...|+|-|..+...+++|+++.|+|.|++|+++++-+++.|+ +++.++-+++|++
T Consensus 152 Vv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~ 231 (375)
T KOG0022|consen 152 VVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFE 231 (375)
T ss_pred EeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHH
Confidence 567889999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-----HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|++..+|+.+. +.+.++. +|+|+.|||+|+.+++++++.+.+.| |+-+.+|.... ..+++.+.++
T Consensus 232 ~ak~-fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~ 310 (375)
T KOG0022|consen 232 KAKE-FGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV 310 (375)
T ss_pred HHHh-cCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc
Confidence 9999 999999999842 2333333 49999999999999999999999999 99999997653 4677888888
Q ss_pred cCcccceeeeccccccCC
Q 030694 152 TGEEEDSWWQSHWGVEGD 169 (173)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~ 169 (173)
.+..+....+..+.++.+
T Consensus 311 ~GR~~~Gs~FGG~K~~~~ 328 (375)
T KOG0022|consen 311 TGRTWKGSAFGGFKSKSD 328 (375)
T ss_pred cccEEEEEecccccchhh
Confidence 877766555555555554
No 15
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.89 E-value=2.3e-22 Score=156.99 Aligned_cols=149 Identities=22% Similarity=0.328 Sum_probs=124.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++++++++.|||+++.+...++++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 145 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~ 224 (368)
T TIGR02818 145 VVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFE 224 (368)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998776677999999999999999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC--CcccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK--PLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~ 151 (173)
.+++ +|++.++++.+ .+. +.++. +++|++|||+|.+..+..++++++++ |+++.+|...+ ...++...++
T Consensus 225 ~a~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~ 303 (368)
T TIGR02818 225 LAKK-LGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV 303 (368)
T ss_pred HHHH-hCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh
Confidence 9988 99999988763 222 22332 38999999999876788999999886 99999997542 2344444444
No 16
>PLN02740 Alcohol dehydrogenase-like
Probab=99.89 E-value=4.2e-22 Score=156.12 Aligned_cols=139 Identities=26% Similarity=0.334 Sum_probs=120.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.++++.+++++.|||+++.....+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 158 ~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~ 237 (381)
T PLN02740 158 VLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFE 237 (381)
T ss_pred EEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHH
Confidence 467788999999999999999999999999998776777999999999999999999999999999 6999999999999
Q ss_pred HHHHHcCCCEEeeCCCh--HH---HHHhcC-CccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQ--DE---MQAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~---~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~ 141 (173)
.+++ +|++.++++.+. ++ +.++.+ ++|++||++|.+..+..++.+++++ |+++.+|...+
T Consensus 238 ~a~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~ 304 (381)
T PLN02740 238 KGKE-MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT 304 (381)
T ss_pred HHHH-cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC
Confidence 9988 999989887652 22 223333 7999999999877789999999997 99999997654
No 17
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.89 E-value=4.6e-22 Score=148.80 Aligned_cols=160 Identities=28% Similarity=0.415 Sum_probs=140.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++++..+.+++++.+++.++.+.|...|.+-++.+...+++|+++.|+|.|++|++++|-++..|+ ++++++.+++|++
T Consensus 145 vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~ 224 (366)
T COG1062 145 VVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLE 224 (366)
T ss_pred eecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHH
Confidence 568889999999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHcCCCEEeeCCChH-HH---HHhcC-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQD-EM---QAAMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~-~~---~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
++++ ||+++++|+.+.. .. .++.+ +.|++|||+|+...+++++.+++++|+.+.+|..+. ..+++..++...
T Consensus 225 ~A~~-fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g 303 (366)
T COG1062 225 LAKK-FGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG 303 (366)
T ss_pred HHHh-cCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc
Confidence 9999 9999999998763 33 33444 999999999999999999999999999999997653 456777788777
Q ss_pred cccceeeecccc
Q 030694 154 EEEDSWWQSHWG 165 (173)
Q Consensus 154 ~~~~~~~~~~~~ 165 (173)
.. |.+++.+
T Consensus 304 r~---~~Gs~~G 312 (366)
T COG1062 304 RV---WKGSAFG 312 (366)
T ss_pred ce---EEEEeec
Confidence 33 4444443
No 18
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.89 E-value=2.2e-22 Score=154.88 Aligned_cols=149 Identities=29% Similarity=0.334 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|+++++++|+++++++++++++.+.|||+++.. ..+++|++|+|+|+|++|++++|+++..|++|++++++++|++.
T Consensus 126 ~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~ 204 (329)
T TIGR02822 126 TVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRL 204 (329)
T ss_pred EeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 56788999999999999999999999999999975 45699999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCcccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEED 157 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~ 157 (173)
+++ +|+++++++.+.. .+++|+++++.+....+..++++++++|+++.+|...+ ...++...++.++..+
T Consensus 205 a~~-~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i 275 (329)
T TIGR02822 205 ALA-LGAASAGGAYDTP-----PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQI 275 (329)
T ss_pred HHH-hCCceeccccccC-----cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEE
Confidence 998 9999998754321 23689999998877789999999999999999997533 2356666666676653
No 19
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.88 E-value=4.1e-22 Score=154.52 Aligned_cols=159 Identities=25% Similarity=0.247 Sum_probs=130.2
Q ss_pred ccccceeEECCC------CCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 2 VADEHFVVRIPE------GAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 2 ~~~~~~~~~~p~------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
++|.++++++|+ ++++++++++++++.|+|+++.. ..++++++|+|+|+|++|++++|+++..|++|++++++
T Consensus 121 ~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~ 199 (349)
T TIGR03201 121 VVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ-AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDID 199 (349)
T ss_pred EechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence 567788999998 89999999999999999999876 45589999999999999999999999999999999999
Q ss_pred cchHHHHHHHcCCCEEeeCCCh---HHHHH---hcC--Ccc----EEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc
Q 030694 76 PSKKSEAVERLGADSFLVSRDQ---DEMQA---AMG--TMD----GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~---~~~~~---~~~--~~d----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
++|++.+++ +|+++++++.+. +..+. ..+ ++| ++|||+|....+..++++++++|+++.+|...+..
T Consensus 200 ~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~ 278 (349)
T TIGR03201 200 PEKLEMMKG-FGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKT 278 (349)
T ss_pred HHHHHHHHH-hCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCc
Confidence 999999988 999988887553 22222 222 565 89999999877888999999999999999876555
Q ss_pred ccCccccccCcccceeeeccc
Q 030694 144 ELPAFPLLTGEEEDSWWQSHW 164 (173)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~ 164 (173)
.++...++.+..+ +.+++.
T Consensus 279 ~~~~~~~~~~~~~--~~g~~~ 297 (349)
T TIGR03201 279 EYRLSNLMAFHAR--ALGNWG 297 (349)
T ss_pred ccCHHHHhhcccE--EEEEec
Confidence 6666666665544 444443
No 20
>PLN02827 Alcohol dehydrogenase-like
Probab=99.88 E-value=1.2e-21 Score=153.40 Aligned_cols=155 Identities=21% Similarity=0.257 Sum_probs=127.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|++.++++|+++++++++++++++.++|+++.+...+++|++|+|+|+|++|++++|+++.+|+ .|++++++++|++
T Consensus 153 ~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~ 232 (378)
T PLN02827 153 VVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAE 232 (378)
T ss_pred EechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 467889999999999999999999999999887766667999999999999999999999999999 5888888999999
Q ss_pred HHHHHcCCCEEeeCCCh--HH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCCcccCc-ccccc
Q 030694 81 EAVERLGADSFLVSRDQ--DE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKPLELPA-FPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~ 152 (173)
.+++ +|++.++++.+. ++ +.+.. +++|++||++|....+..+++.++++ |+++.+|.......++. ..++.
T Consensus 233 ~a~~-lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 233 KAKT-FGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HHHH-cCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 9988 999989887652 22 22222 37999999999876789999999998 99999997654444443 34666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 312 ~~~~i 316 (378)
T PLN02827 312 SGRTL 316 (378)
T ss_pred cCceE
Confidence 66653
No 21
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.88 E-value=8.4e-22 Score=153.76 Aligned_cols=138 Identities=27% Similarity=0.369 Sum_probs=120.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|++.++++|+++++++++.+++++.|||+++.....++++++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 146 ~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~ 225 (368)
T cd08300 146 VVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFE 225 (368)
T ss_pred EEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 457789999999999999999999999999998776677999999999999999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCCh--HHH---HHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQ--DEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~---~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 140 (173)
.+++ +|+++++++.+. +.. .+.. +++|++||++|++..+..++++++++ |+++.+|...
T Consensus 226 ~~~~-lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~ 291 (368)
T cd08300 226 LAKK-FGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAA 291 (368)
T ss_pred HHHH-cCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCC
Confidence 9987 999999987653 222 2222 37999999999876789999999987 9999999764
No 22
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.88 E-value=1.2e-21 Score=151.91 Aligned_cols=147 Identities=22% Similarity=0.221 Sum_probs=120.0
Q ss_pred ECCCCCCcc-cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC
Q 030694 10 RIPEGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG 87 (173)
Q Consensus 10 ~~p~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g 87 (173)
++|++++++ +++++++++.|||+++.....+++|++|+|+|+ |++|++++|+++.+|++|++++++++|++.+++.+|
T Consensus 125 ~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lG 204 (348)
T PLN03154 125 QLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLG 204 (348)
T ss_pred cCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcC
Confidence 458999886 678999999999999987777799999999998 999999999999999999999999999998874499
Q ss_pred CCEEeeCCCh-HHHH---Hhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cc-----cCccccccCccc
Q 030694 88 ADSFLVSRDQ-DEMQ---AAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LE-----LPAFPLLTGEEE 156 (173)
Q Consensus 88 ~~~v~~~~~~-~~~~---~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-----~~~~~~~~~~~~ 156 (173)
++.++++.+. +..+ +.. +++|++|||+|+. .+..++++++++|+++.+|...+. .+ ++...++.++.+
T Consensus 205 a~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~ 283 (348)
T PLN03154 205 FDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIR 283 (348)
T ss_pred CCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccce
Confidence 9999998642 3222 222 3799999999987 689999999999999999975432 11 244556666665
Q ss_pred c
Q 030694 157 D 157 (173)
Q Consensus 157 ~ 157 (173)
+
T Consensus 284 i 284 (348)
T PLN03154 284 M 284 (348)
T ss_pred E
Confidence 3
No 23
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.88 E-value=7.3e-22 Score=151.97 Aligned_cols=136 Identities=28% Similarity=0.356 Sum_probs=119.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhC------CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG------LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~------~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~ 74 (173)
++|...++++|++++++++|++|.++.|||.++.... .+++|++|||+|+ |++|++++|+|+..|+..++++.
T Consensus 111 v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~ 190 (347)
T KOG1198|consen 111 VVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTAC 190 (347)
T ss_pred EcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEc
Confidence 5678899999999999999999999999999999999 7899999999988 89999999999999976667777
Q ss_pred CcchHHHHHHHcCCCEEeeCCChHHHHHhcC----CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQDEMQAAMG----TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~----~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++.+.+++ +|+++++||++.+..+++.. ++|++|||+|+. .....+.++...|+...++..
T Consensus 191 s~e~~~l~k~-lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~ 257 (347)
T KOG1198|consen 191 SKEKLELVKK-LGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLV 257 (347)
T ss_pred ccchHHHHHH-cCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCCceEEEEec
Confidence 7888999998 99999999999877666543 899999999998 577888888888865555543
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.87 E-value=3.9e-21 Score=149.90 Aligned_cols=150 Identities=27% Similarity=0.409 Sum_probs=125.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
+++.++++++|+++++++++.+++++.|||+++.....+++|++|+|+|+|++|++++++++.+|+ +|++++++++|++
T Consensus 144 ~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 223 (365)
T cd08277 144 VVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFE 223 (365)
T ss_pred EEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998766677999999999989999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-----HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCC-CcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQ-----DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-----~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
.+++ +|+++++++.+. +.+.+.. +++|++|||+|....+..++++++++ |+++.+|...+ ..+++...++.
T Consensus 224 ~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 302 (365)
T cd08277 224 KAKE-FGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL 302 (365)
T ss_pred HHHH-cCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh
Confidence 9987 999888887642 2222222 47999999999876788999999885 99999997653 34555555553
No 25
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.87 E-value=4.8e-21 Score=149.55 Aligned_cols=153 Identities=24% Similarity=0.365 Sum_probs=126.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.+++++.|||+++.....+++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++
T Consensus 147 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~ 226 (369)
T cd08301 147 VVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFE 226 (369)
T ss_pred EEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 467789999999999999999999999999998777777999999999999999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcC-CEEEEeCCCCCC--cccCccccc
Q 030694 81 EAVERLGADSFLVSRD--QDE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLGAPEKP--LELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~ 151 (173)
.+++ +|++.++++.. .+. +.+.. +++|++||++|....+..++.+++++ |+++.+|..... .+++...++
T Consensus 227 ~~~~-~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~ 305 (369)
T cd08301 227 QAKK-FGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL 305 (369)
T ss_pred HHHH-cCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh
Confidence 9988 99998888764 222 22222 37999999999886788999999996 999999976532 344443343
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
++++
T Consensus 306 -~~~~ 309 (369)
T cd08301 306 -NGRT 309 (369)
T ss_pred -cCCe
Confidence 4444
No 26
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.87 E-value=3.5e-21 Score=148.61 Aligned_cols=138 Identities=21% Similarity=0.217 Sum_probs=118.2
Q ss_pred cccc-ceeEECC-CCCCcc-cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADE-HFVVRIP-EGAPLD-ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|+ +.++++| ++++++ +++++++++.|||+++.....+++|++|+|+|+ |++|.+++|+++.+|++|++++++++
T Consensus 108 ~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~ 187 (338)
T cd08295 108 LIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDE 187 (338)
T ss_pred EecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 5677 7899995 678876 789999999999999987777899999999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCCh-HHH---HHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 78 KKSEAVERLGADSFLVSRDQ-DEM---QAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~-~~~---~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+.+++.+|+++++++.+. +.. .+.. +++|++||++|+. .+..++++++++|+++.+|...
T Consensus 188 ~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~ 254 (338)
T cd08295 188 KVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMIS 254 (338)
T ss_pred HHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccc
Confidence 99988876899999986542 322 2222 4899999999986 6899999999999999998654
No 27
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.87 E-value=1.5e-21 Score=149.89 Aligned_cols=136 Identities=26% Similarity=0.272 Sum_probs=116.6
Q ss_pred cccceeEEC----CCCCCcccc-cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 3 ADEHFVVRI----PEGAPLDAT-APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 3 ~~~~~~~~~----p~~~~~~~a-a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
+|.+++.++ |++++++++ +++++++.|||+++.....+++|++|+|+|+ |++|.+++|+++..|++|+++++++
T Consensus 94 ~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 94 SDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD 173 (325)
T ss_pred echhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 466666666 899999887 6899999999999977777799999999997 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCCh-HH---HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQ-DE---MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~-~~---~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++.+.+++ +|++.++++.+. +. ..... +++|++||++|+. .+..++++++++|+++.+|...
T Consensus 174 ~~~~~~~~-lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~ 240 (325)
T TIGR02825 174 EKVAYLKK-LGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAICGAIS 240 (325)
T ss_pred HHHHHHHH-cCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEEecchh
Confidence 99999988 999999988753 22 22222 3799999999988 5799999999999999998643
No 28
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.87 E-value=5.5e-21 Score=147.25 Aligned_cols=156 Identities=35% Similarity=0.580 Sum_probs=132.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++++++++.|||+++... .+.++++|+|+|+|++|++++++++.+|++|+++++++++++.
T Consensus 124 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~ 202 (333)
T cd08296 124 LAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADL 202 (333)
T ss_pred EEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHH
Confidence 467788999999999999999999999999999776 6689999999999999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccccee
Q 030694 82 AVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEEDSW 159 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (173)
+++ +|+++++++...+..+.+. +++|+++|+.|....+...+++++++|+++.+|......+++...++.++.++..
T Consensus 203 ~~~-~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~ 281 (333)
T cd08296 203 ARK-LGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHG 281 (333)
T ss_pred HHH-cCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEE
Confidence 977 9999998887654433332 4799999999766578899999999999999997665556666666677776443
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.87 E-value=2.6e-21 Score=149.98 Aligned_cols=154 Identities=25% Similarity=0.312 Sum_probs=128.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+ ..+.|||+++ ....++++++|+|+|+|++|.+++|+++..|+ +|+++++++++.+
T Consensus 134 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~ 211 (351)
T cd08233 134 VVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRE 211 (351)
T ss_pred EechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 4577889999999999888755 6778999999 44556899999999989999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++.++++.+.++.+++ . +++|++||++|....+..++++++++|+++.+|......+++...++.++.
T Consensus 212 ~~~~-~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 290 (351)
T cd08233 212 LAEE-LGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEK 290 (351)
T ss_pred HHHH-hCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCc
Confidence 8887 999999988765544333 2 269999999997667899999999999999999766556777777777777
Q ss_pred cce
Q 030694 156 EDS 158 (173)
Q Consensus 156 ~~~ 158 (173)
.+.
T Consensus 291 ~i~ 293 (351)
T cd08233 291 TLT 293 (351)
T ss_pred EEE
Confidence 633
No 30
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.86 E-value=1.2e-21 Score=151.57 Aligned_cols=149 Identities=17% Similarity=0.177 Sum_probs=117.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcCChHHHHHHHHHHH-CC-CeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGLGGLGHVAVKFAKA-MG-VKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g-~~v~~~~~~~~ 77 (173)
.+|+++++++|+++++++++ +.....++|+++... ..+++|++|+|+|+|++|++++|+++. .| .+|++++++++
T Consensus 122 ~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~ 200 (341)
T cd08237 122 FLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200 (341)
T ss_pred EEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHh
Confidence 57889999999999998766 556788889988643 234789999999999999999999986 55 58999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC---ccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA---VHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
|++.+++ .+.++.++ +..+ ..++|++||++|+ +..+..++++++++|+++.+|...+..+++...++.++
T Consensus 201 k~~~a~~-~~~~~~~~----~~~~--~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~ 273 (341)
T cd08237 201 KLDLFSF-ADETYLID----DIPE--DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKG 273 (341)
T ss_pred HHHHHhh-cCceeehh----hhhh--ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCc
Confidence 9999987 77654432 1111 1269999999995 34688999999999999999976555667777778887
Q ss_pred ccce
Q 030694 155 EEDS 158 (173)
Q Consensus 155 ~~~~ 158 (173)
.++.
T Consensus 274 ~~i~ 277 (341)
T cd08237 274 LTLV 277 (341)
T ss_pred eEEE
Confidence 7633
No 31
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.86 E-value=6e-21 Score=148.28 Aligned_cols=160 Identities=22% Similarity=0.260 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh------CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC-
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY------GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST- 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~------~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~- 74 (173)
.+|++.++++|++++ + ++++..+..++++++... ...+++++|+|+|+|++|++++|+++..|++|+++++
T Consensus 128 ~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 128 VDDPEYLVKVPPSLA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred EeccccEEECCCCCC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecC
Confidence 568889999999998 4 344445555544444322 2246899999999999999999999999999999998
Q ss_pred --CcchHHHHHHHcCCCEEeeCCChHHHH-HhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccC---
Q 030694 75 --SPSKKSEAVERLGADSFLVSRDQDEMQ-AAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELP--- 146 (173)
Q Consensus 75 --~~~~~~~~~~~~g~~~v~~~~~~~~~~-~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~--- 146 (173)
+++|++.+++ +|++. +++.+.+..+ ...+++|++|||+|.+..+..++++++++|+++.+|...+ ..+++
T Consensus 206 ~~~~~~~~~~~~-~Ga~~-v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~ 283 (355)
T cd08230 206 DPPDPKADIVEE-LGATY-VNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGE 283 (355)
T ss_pred CCCHHHHHHHHH-cCCEE-ecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhh
Confidence 5778888887 99986 4555433221 1234899999999987678899999999999999997655 34455
Q ss_pred -ccccccCcccceeeecccccc
Q 030694 147 -AFPLLTGEEEDSWWQSHWGVE 167 (173)
Q Consensus 147 -~~~~~~~~~~~~~~~~~~~~~ 167 (173)
...++.++.+ +.+++..++
T Consensus 284 ~~~~~~~k~~~--i~g~~~~~~ 303 (355)
T cd08230 284 LNRDLVLGNKA--LVGSVNANK 303 (355)
T ss_pred hhhhHhhcCcE--EEEecCCch
Confidence 3456667766 444444443
No 32
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.86 E-value=7.6e-21 Score=147.36 Aligned_cols=155 Identities=27% Similarity=0.339 Sum_probs=124.4
Q ss_pred ccccceeEE-CCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 2 VADEHFVVR-IPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~-~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
++|.+++++ +|+++ ..+++++...+.+++++.......+++.+|+|+|+|++|++++++++..|+ +|++++.+++|+
T Consensus 128 ~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl 206 (350)
T COG1063 128 RVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERL 206 (350)
T ss_pred EeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 466555555 47887 667788999999998885444444666699999999999999999999998 899999999999
Q ss_pred HHHHHHcCCCEEeeCCChHH---HHHhc-C-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCc-ccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDE---MQAAM-G-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPL-ELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~---~~~~~-~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~ 153 (173)
+.+++..|++.+++....+. ..+.. + ++|++|||+|.+..+.++++.++++|+++.+|...+.. .++...+..|
T Consensus 207 ~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~k 286 (350)
T COG1063 207 ELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSK 286 (350)
T ss_pred HHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhc
Confidence 99999566777766655322 22233 2 79999999998888999999999999999999887654 6778888888
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
++.+
T Consensus 287 el~l 290 (350)
T COG1063 287 ELTL 290 (350)
T ss_pred ccEE
Confidence 8873
No 33
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.85 E-value=1.7e-20 Score=145.87 Aligned_cols=154 Identities=28% Similarity=0.331 Sum_probs=126.7
Q ss_pred ccccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 2 VADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
.+|++ .++++|++++.++++.+++++.|||+++......+++++|||+|+|++|++++++++..|+ +|+++++++++.
T Consensus 136 ~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~ 215 (361)
T cd08231 136 YLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERL 215 (361)
T ss_pred EecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 35564 7999999999999888889999999999888876799999999889999999999999999 999999999999
Q ss_pred HHHHHHcCCCEEeeCCChH------HHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccc
Q 030694 80 SEAVERLGADSFLVSRDQD------EMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFP 149 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~------~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~ 149 (173)
+.+++ +|.+.++++...+ .+.+.. .++|++|||+|+...+..++++++++|+++.+|.... ..+++...
T Consensus 216 ~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 294 (361)
T cd08231 216 ELARE-FGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPER 294 (361)
T ss_pred HHHHH-cCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHH
Confidence 98887 9998888776432 233333 2799999999986578899999999999999996543 23455555
Q ss_pred cccCccc
Q 030694 150 LLTGEEE 156 (173)
Q Consensus 150 ~~~~~~~ 156 (173)
++.++..
T Consensus 295 ~~~~~~~ 301 (361)
T cd08231 295 IVRKNLT 301 (361)
T ss_pred HhhcccE
Confidence 5666665
No 34
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.85 E-value=1.4e-20 Score=144.43 Aligned_cols=136 Identities=26% Similarity=0.277 Sum_probs=116.8
Q ss_pred ccccc---eeEECCCCCC--c---ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE
Q 030694 2 VADEH---FVVRIPEGAP--L---DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI 72 (173)
Q Consensus 2 ~~~~~---~~~~~p~~~~--~---~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~ 72 (173)
+++++ .++++|++++ + ..++++++++.|||+++.....+++|++++|+|+ |++|.+++|+++..|++|+++
T Consensus 95 ~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~ 174 (329)
T cd08294 95 VSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGC 174 (329)
T ss_pred EECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEE
Confidence 46777 9999999988 2 2234688999999999987777799999999997 999999999999999999999
Q ss_pred eCCcchHHHHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 73 STSPSKKSEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++++.+.+++ +|+++++++.+.+..+++ . +++|++||++|+. .+..++++++++|+++.+|..
T Consensus 175 ~~s~~~~~~l~~-~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~ 243 (329)
T cd08294 175 AGSDDKVAWLKE-LGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSI 243 (329)
T ss_pred eCCHHHHHHHHH-cCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHhhccCCEEEEEcch
Confidence 999999999998 999999998765543333 2 3799999999996 689999999999999999853
No 35
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.85 E-value=1.4e-20 Score=145.39 Aligned_cols=137 Identities=19% Similarity=0.215 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCccc----ccchhhHHHHHHHHHHhhCCCCCC--CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEe
Q 030694 2 VADEHFVVRIPEGAPLDA----TAPLLCAGITVYSPLRFYGLDKPG--MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVIS 73 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~----aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~ 73 (173)
++|++.++++|++++.++ +++++.++.|||+++.....++++ ++|+|+|+ |++|.+++|+++.+|+ +|++++
T Consensus 108 ~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~ 187 (345)
T cd08293 108 VLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGIC 187 (345)
T ss_pred EecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEc
Confidence 578899999999865443 456788899999999777666766 99999998 9999999999999999 899999
Q ss_pred CCcchHHHHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 74 TSPSKKSEAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 74 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++++|.+.+++++|++.++++.+.+..+. .. +++|++||++|+. .+..++++++++|+++.+|..
T Consensus 188 ~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 188 GSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred CCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEEEEeee
Confidence 99999998877699999999876544333 22 3899999999998 578999999999999999853
No 36
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.85 E-value=2.1e-20 Score=144.77 Aligned_cols=153 Identities=24% Similarity=0.316 Sum_probs=120.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+. ...++++++.. ..++++++|+|+|+|++|++++|+++.+|++ |++++++++|++
T Consensus 122 ~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 199 (347)
T PRK10309 122 VVKRKNLFALPTDMPIEDGAFIE-PITVGLHAFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLA 199 (347)
T ss_pred EeehHHeEECcCCCCHHHhhhhh-HHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 46778899999999999888663 44557877644 4558999999999899999999999999996 788899999999
Q ss_pred HHHHHcCCCEEeeCCChH--HHHHhc--CCcc-EEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCc---ccccc
Q 030694 81 EAVERLGADSFLVSRDQD--EMQAAM--GTMD-GIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPA---FPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~~~~~~--~~~d-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~---~~~~~ 152 (173)
.+++ +|+++++++...+ ...+.. .++| ++|||+|+...+..++++++++|+++.+|...+..+++. ..++.
T Consensus 200 ~~~~-~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~ 278 (347)
T PRK10309 200 LAKS-LGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILR 278 (347)
T ss_pred HHHH-cCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhh
Confidence 9877 9999888876532 222222 2788 999999998778999999999999999997655444433 35666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 279 ~~~~i 283 (347)
T PRK10309 279 KELTV 283 (347)
T ss_pred cCcEE
Confidence 66653
No 37
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=99.85 E-value=1.5e-20 Score=137.54 Aligned_cols=166 Identities=20% Similarity=0.332 Sum_probs=137.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+.+++.++++++.++++.||.+.++.+|||+++..+-++.+|++|+..|+ +.+|.+.+|+|++.|.+-+.+.|+....+
T Consensus 120 v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ie 199 (354)
T KOG0025|consen 120 VFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIE 199 (354)
T ss_pred eecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHH
Confidence 45678999999999999999999999999999999999999999999999 89999999999999999888888877666
Q ss_pred HHHHH---cCCCEEeeCCCh---HHHHH--hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccCccccc
Q 030694 81 EAVER---LGADSFLVSRDQ---DEMQA--AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~---~g~~~v~~~~~~---~~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~ 151 (173)
+++++ +|+++|+...+. +.... ...++.++|||+|+.+ -..+.+.|..||.++.+|..+ .+..++...++
T Consensus 200 el~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lI 278 (354)
T KOG0025|consen 200 ELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLI 278 (354)
T ss_pred HHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchhe
Confidence 66553 799999865432 11111 1347999999999995 678999999999999999765 56899999999
Q ss_pred cCccc-ceeeeccccccC
Q 030694 152 TGEEE-DSWWQSHWGVEG 168 (173)
Q Consensus 152 ~~~~~-~~~~~~~~~~~~ 168 (173)
+|++. ..||.+.|...+
T Consensus 279 FKdl~~rGfWvt~W~~~~ 296 (354)
T KOG0025|consen 279 FKDLKLRGFWVTRWKKEH 296 (354)
T ss_pred eccceeeeeeeeehhhcc
Confidence 99994 456666665544
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.85 E-value=1.8e-20 Score=144.45 Aligned_cols=152 Identities=30% Similarity=0.433 Sum_probs=125.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~ 79 (173)
.++.++++++|+++++++++.+++++.|||+++... ..+.++++|+|+|+|++|++++++++..| .+|+++.+++++.
T Consensus 126 ~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~ 205 (340)
T cd05284 126 LVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEAL 205 (340)
T ss_pred EecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHH
Confidence 567789999999999999999999999999999876 45688999999999779999999999999 7999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|.++++++... ..++ .. .++|+++|++|+....+.++++++++|+++.+|..+. .+++...++.++
T Consensus 206 ~~~~~-~g~~~~~~~~~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~ 282 (340)
T cd05284 206 KLAER-LGADHVLNASDD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTE 282 (340)
T ss_pred HHHHH-hCCcEEEcCCcc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcc
Confidence 99977 999888887764 3333 22 2799999999985578899999999999999986553 344444434455
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 283 ~~ 284 (340)
T cd05284 283 IS 284 (340)
T ss_pred eE
Confidence 54
No 39
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.85 E-value=2.8e-20 Score=143.54 Aligned_cols=153 Identities=60% Similarity=0.992 Sum_probs=130.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++++++.+++.+.|||+++.... ++++++++|.|+|++|.+++++++..|++|+++++++++.+.
T Consensus 130 ~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~ 208 (337)
T cd05283 130 VVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKED 208 (337)
T ss_pred EechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677899999999999999999999999999997776 589999999888999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|.+.+++....+......+++|++|||+|.......++++++++|+++.+|.......++...++.++..
T Consensus 209 ~~~-~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 282 (337)
T cd05283 209 ALK-LGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKS 282 (337)
T ss_pred HHH-cCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceE
Confidence 977 99988888766554444456899999999988558899999999999999997655445666665666665
No 40
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.85 E-value=4.6e-20 Score=143.87 Aligned_cols=154 Identities=29% Similarity=0.387 Sum_probs=128.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+++++++++|+++++++++++++++.||+.++.....++++++|+|+|+|++|++++++++..|+ ++++++++++|.+
T Consensus 146 ~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~ 225 (365)
T cd08278 146 VVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLE 225 (365)
T ss_pred EecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998777777899999999889999999999999999 6888889999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~ 154 (173)
.+++ +|++.++++.+.+..+++ ..++|+++||+|....+..++++++++|+++.+|..+ ....++...++.++
T Consensus 226 ~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 304 (365)
T cd08278 226 LAKE-LGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSG 304 (365)
T ss_pred HHHH-cCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcC
Confidence 8887 999988887664332222 2489999999997667899999999999999999653 33456666654555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 305 ~~ 306 (365)
T cd08278 305 KT 306 (365)
T ss_pred ce
Confidence 54
No 41
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.84 E-value=4.8e-20 Score=141.48 Aligned_cols=152 Identities=20% Similarity=0.228 Sum_probs=121.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEE-cC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVV-GL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
.+|++.++++|+++++++++++++.+.|||.++.. ... ++++++|+ |+ |++|++++|+++.+|++|++++++++|+
T Consensus 104 ~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~-~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~ 181 (324)
T cd08291 104 VADAQQCLPLPDGVSFEQGASSFVNPLTALGMLET-ARE-EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQV 181 (324)
T ss_pred eecHHHeEECCCCCCHHHHhhhcccHHHHHHHHHh-hcc-CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence 56788999999999999999899999999865543 332 55666665 55 9999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-c-ccCcccccc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-L-ELPAFPLLT 152 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~ 152 (173)
+.+++ +|+++++++...++.+++ . +++|++||++|+. .....+.+++++|+++.+|..++. . .++...++.
T Consensus 182 ~~~~~-~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 259 (324)
T cd08291 182 DLLKK-IGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIF 259 (324)
T ss_pred HHHHH-cCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhh
Confidence 99998 999999988765544333 2 2799999999988 467889999999999999965432 2 355666666
Q ss_pred Ccccc
Q 030694 153 GEEED 157 (173)
Q Consensus 153 ~~~~~ 157 (173)
++.++
T Consensus 260 ~~~~~ 264 (324)
T cd08291 260 KNKSI 264 (324)
T ss_pred cCcEE
Confidence 76653
No 42
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.84 E-value=1.1e-19 Score=139.14 Aligned_cols=153 Identities=21% Similarity=0.281 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++.+.|||+++.. ..++++++|+|+|+ |.+|++++++++.+|++++++..++++.+
T Consensus 100 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~ 178 (324)
T cd08292 100 VAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVA 178 (324)
T ss_pred EEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence 46778899999999999999999999999999865 55689999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++.+.+..+++ . .++|++|||+|+. ....++++++++|+++.+|...+ ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (324)
T cd08292 179 ELRA-LGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQ 256 (324)
T ss_pred HHHh-cCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCC
Confidence 9988 899888888765443332 2 2799999999997 57899999999999999986533 2445555556666
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 257 ~~~ 259 (324)
T cd08292 257 ATV 259 (324)
T ss_pred CEE
Confidence 653
No 43
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.83 E-value=6.3e-20 Score=135.24 Aligned_cols=137 Identities=25% Similarity=0.228 Sum_probs=119.2
Q ss_pred cccceeEECCCCCCcc--cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchH
Q 030694 3 ADEHFVVRIPEGAPLD--ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~~~~~~p~~~~~~--~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~ 79 (173)
++.+.+.++++..-+. ....|.+++.|||.++.+.++.++|++|+|-+| |++|..+.|++|..|++|+.++.+++|.
T Consensus 109 ~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~ 188 (340)
T COG2130 109 SDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC 188 (340)
T ss_pred echhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH
Confidence 3455677776432222 223788999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+++.+|.+..+||+..+..+.+. .++|+.||++|++ .++..+..|+..+|++.||..+
T Consensus 189 ~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS 252 (340)
T COG2130 189 DFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFENVGGE-VLDAVLPLLNLFARIPVCGAIS 252 (340)
T ss_pred HHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEEcCCch-HHHHHHHhhccccceeeeeehh
Confidence 9999999999999999987666654 3999999999999 7999999999999999999654
No 44
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.83 E-value=1.1e-19 Score=135.39 Aligned_cols=154 Identities=34% Similarity=0.435 Sum_probs=127.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.+.++++|+++++++++.+++.+.|||+++.....++++++++|+|+|++|++++++++..|.+|+++++++++.+.
T Consensus 94 ~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 94 VVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred EechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 46778999999999999999999999999999988887789999999999559999999999999999999999999998
Q ss_pred HHHHcCCCEEeeCCChHHHHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccC-ccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~ 156 (173)
+++ +|.+.+++....+....+ .+++|+++++++.......++++++++|+++.+|......... ....+.++..
T Consensus 174 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~ 252 (271)
T cd05188 174 AKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDLRRLLFKELT 252 (271)
T ss_pred HHH-hCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccHHHHHhcceE
Confidence 877 888888877654443332 3489999999998446889999999999999999765433222 3445566665
No 45
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.83 E-value=3.9e-20 Score=141.23 Aligned_cols=143 Identities=21% Similarity=0.227 Sum_probs=111.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|++.++++|++++++. +.+ ....|||+++.+. . .++++++|+|+|++|++++|+++.+|++ |++++.+++|++
T Consensus 108 ~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~ 183 (308)
T TIGR01202 108 VTPASRVCRLDPALGPQG-ALL-ALAATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRD 183 (308)
T ss_pred EcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 568889999999998764 444 4578999999764 2 4688999999999999999999999996 556667776766
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
.+.+ + .++|+.+. ...++|++|||+|++..++.++++++++|+++.+|...+..+++...++.++.++
T Consensus 184 ~a~~-~---~~i~~~~~-----~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i 251 (308)
T TIGR01202 184 GATG-Y---EVLDPEKD-----PRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARL 251 (308)
T ss_pred hhhh-c---cccChhhc-----cCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEE
Confidence 5544 3 34554321 2347999999999986789999999999999999976655677777777777653
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.83 E-value=1e-19 Score=143.21 Aligned_cols=153 Identities=20% Similarity=0.286 Sum_probs=124.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhh--CCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFY--GLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
++|.++++++|+++++++++.+++.+.|||+++... ..++++++|+|+|+ |++|++++++++.+|+++++++++++|
T Consensus 151 ~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~ 230 (393)
T cd08246 151 LVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEK 230 (393)
T ss_pred EechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence 467789999999999999999999999999998754 45688999999998 999999999999999999999999999
Q ss_pred HHHHHHHcCCCEEeeCCCh-------------------------HHHHHhcC---CccEEEEcCCCccchHHHHHhhhcC
Q 030694 79 KSEAVERLGADSFLVSRDQ-------------------------DEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQ 130 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~-------------------------~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~ 130 (173)
++.+++ +|++.+++++.. +.+.++.+ ++|++|||+|+. .+..++++++++
T Consensus 231 ~~~~~~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~ 308 (393)
T cd08246 231 AEYCRA-LGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRG 308 (393)
T ss_pred HHHHHH-cCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccC
Confidence 999988 999888886432 11122222 699999999986 688999999999
Q ss_pred CEEEEeCCCCC-CcccCccccccCccc
Q 030694 131 GKLVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 131 G~~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
|+++.+|...+ ...++...+..++..
T Consensus 309 G~~v~~g~~~~~~~~~~~~~l~~~~~~ 335 (393)
T cd08246 309 GMVVICAGTTGYNHTYDNRYLWMRQKR 335 (393)
T ss_pred CEEEEEcccCCCCCCCcHHHHhhheeE
Confidence 99999986543 234455555544443
No 47
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.83 E-value=2.1e-19 Score=140.17 Aligned_cols=148 Identities=25% Similarity=0.354 Sum_probs=123.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+||+++.....++++++++|+|+|++|++++++++.+|++ |++++++++|++
T Consensus 143 ~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~ 222 (365)
T cd05279 143 VVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFE 222 (365)
T ss_pred EecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4677899999999999999999999999999987777779999999998899999999999999995 777788999999
Q ss_pred HHHHHcCCCEEeeCCCh--HHHH---Hh-cCCccEEEEcCCCccchHHHHHhhh-cCCEEEEeCCCC--CCcccCcccc
Q 030694 81 EAVERLGADSFLVSRDQ--DEMQ---AA-MGTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE--KPLELPAFPL 150 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~--~~~~---~~-~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~ 150 (173)
.+++ +|.+++++..+. +..+ +. .+++|++||++|....+..++++++ ++|+++.+|... ....++...+
T Consensus 223 ~~~~-~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 300 (365)
T cd05279 223 KAKQ-LGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL 300 (365)
T ss_pred HHHH-hCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH
Confidence 9977 999888877654 3222 22 2489999999997557889999999 999999998653 3456666665
No 48
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.82 E-value=1.1e-19 Score=138.50 Aligned_cols=164 Identities=24% Similarity=0.272 Sum_probs=130.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeC--CcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIST--SPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~--~~~~~ 79 (173)
+++.+.++++|+++++++++ ++..+.+||+++.....++++++|+|.|+|.+|.+++++++..|++|+.+.. ++++.
T Consensus 125 ~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~ 203 (306)
T cd08258 125 LVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRL 203 (306)
T ss_pred EcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 46778999999999999876 8888899999998877789999999987799999999999999999887743 44467
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+.+++ +|.+.+ ++...+..+++ . +++|++||++|....+...+++|+++|+++.+|...+ ...++...++++
T Consensus 204 ~~~~~-~g~~~~-~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 281 (306)
T cd08258 204 DVAKE-LGADAV-NGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQK 281 (306)
T ss_pred HHHHH-hCCccc-CCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhc
Confidence 77777 898777 76654433332 2 3799999999876578899999999999999997652 356777778878
Q ss_pred cccceeeeccccccCCC
Q 030694 154 EEEDSWWQSHWGVEGDS 170 (173)
Q Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (173)
+++ +.+.+.++++|+
T Consensus 282 ~~~--i~g~~~~~~~~~ 296 (306)
T cd08258 282 ELS--VIGSRSSTPASW 296 (306)
T ss_pred CcE--EEEEecCchHhH
Confidence 776 556666666654
No 49
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.82 E-value=2.9e-19 Score=138.43 Aligned_cols=154 Identities=28% Similarity=0.358 Sum_probs=125.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||+++.....+.++++|+|+|+|.+|.+++|+++..|+ +|+++++++++.+
T Consensus 135 ~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~ 214 (350)
T cd08240 135 IVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLE 214 (350)
T ss_pred EecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 456678899999999999999999999999999888776789999999889999999999999999 7999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+.+ +|.+.+++....+..++ .. +++|++||++|....+..++++|+++|+++.+|...+...++...+.+++..
T Consensus 215 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08240 215 AAKA-AGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALT 293 (350)
T ss_pred HHHH-hCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcE
Confidence 9977 99888888765433222 22 3799999999976578999999999999999987655434444444444444
No 50
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.82 E-value=3.5e-19 Score=139.33 Aligned_cols=139 Identities=26% Similarity=0.375 Sum_probs=117.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.+++++.|||+++.....++++++|+|+|+|++|++++++++.+|+ +|++++++++|++
T Consensus 150 ~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~ 229 (373)
T cd08299 150 VVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFA 229 (373)
T ss_pred EecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 567889999999999999999999999999998777777999999999889999999999999999 8999999999999
Q ss_pred HHHHHcCCCEEeeCCChH--H---HHHh-cCCccEEEEcCCCccchHHHHHhh-hcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQD--E---MQAA-MGTMDGIIDTVSAVHPLMPLIGLL-KSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~--~---~~~~-~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~ 141 (173)
.+++ +|++.++++.+.+ . +.+. .+++|+++||+|.+..+..++..+ +++|+++.+|....
T Consensus 230 ~a~~-lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~ 296 (373)
T cd08299 230 KAKE-LGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS 296 (373)
T ss_pred HHHH-cCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC
Confidence 9977 9998888875422 2 2222 247999999999865677766655 57999999997643
No 51
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.82 E-value=4.2e-19 Score=137.24 Aligned_cols=153 Identities=23% Similarity=0.260 Sum_probs=125.1
Q ss_pred cccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchH
Q 030694 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~ 79 (173)
++.+ .++++|++++.++++.+++.+.|||+++.....+.++++++|.|+|.+|.+++|+++.+| .+|++++++++|.
T Consensus 125 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~ 204 (345)
T cd08286 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRL 204 (345)
T ss_pred cccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHH
Confidence 4555 899999999999999999999999998766667789999999988999999999999999 6999988888888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++...+...+ .. .++|++|||+|....++.++++++++|+++.+|.......++...++.++
T Consensus 205 ~~~~~-~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 283 (345)
T cd08286 205 EVAKK-LGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKN 283 (345)
T ss_pred HHHHH-hCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcC
Confidence 88887 99988888765433222 22 37999999999876788899999999999999965544555655555555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 284 ~~ 285 (345)
T cd08286 284 IT 285 (345)
T ss_pred cE
Confidence 54
No 52
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.82 E-value=3.6e-19 Score=138.83 Aligned_cols=154 Identities=25% Similarity=0.446 Sum_probs=126.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.++.++.|||+++.....+.++++++|+|+|.+|.+++++++..|++ +++++.++++.+
T Consensus 147 ~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~ 226 (367)
T cd08263 147 VVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLA 226 (367)
T ss_pred EechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 4567899999999999999999999999999998887778999999998799999999999999997 988989999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC--CcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK--PLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~ 153 (173)
.+++ +|.+.++++...++.+++ . .++|++||++++......++++++++|+++.+|..+. ...++...++.+
T Consensus 227 ~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 305 (367)
T cd08263 227 KAKE-LGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRR 305 (367)
T ss_pred HHHH-hCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhC
Confidence 8877 999889888765443332 2 3799999999987457899999999999999986543 234554554444
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 306 ~~~ 308 (367)
T cd08263 306 GIK 308 (367)
T ss_pred CeE
Confidence 443
No 53
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.81 E-value=3.1e-19 Score=137.27 Aligned_cols=154 Identities=33% Similarity=0.415 Sum_probs=127.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
+++.+.++++|++++.++++.++..+.|||+++.....++++++++|.|+|.+|.+++++++..|++|+++++++++.+.
T Consensus 125 ~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~ 204 (338)
T cd08254 125 VVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLEL 204 (338)
T ss_pred EechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 45678899999999999999999999999999988887899999999887999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|.+.+++......... . .+++|+++||+|....+..++++|+++|+++.+|.......++...++.++..
T Consensus 205 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 282 (338)
T cd08254 205 AKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELR 282 (338)
T ss_pred HHH-hCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccE
Confidence 977 89888877665332221 1 23799999999877678899999999999999986554445555555555554
No 54
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.81 E-value=6.5e-19 Score=135.96 Aligned_cols=153 Identities=37% Similarity=0.611 Sum_probs=126.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.++..+.|||+++... .++++++++|+|+ +.+|.+++++++.+|++|+++.+++++.+
T Consensus 126 ~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 204 (341)
T cd08297 126 IADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE 204 (341)
T ss_pred EeccccEEECCCCCCHHHHHHHHcchHHHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 467789999999999999999999999999998775 5689999999998 67999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++ . +++|+++|+.+.......++++++++|+++.+|..+.. .+++...++.++
T Consensus 205 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08297 205 LAKE-LGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRG 283 (341)
T ss_pred HHHH-cCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcc
Confidence 9876 999888888765443332 2 37999999877666788999999999999999865532 245555555555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 284 ~~ 285 (341)
T cd08297 284 IT 285 (341)
T ss_pred cE
Confidence 54
No 55
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.81 E-value=3.6e-20 Score=155.10 Aligned_cols=160 Identities=21% Similarity=0.259 Sum_probs=135.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+++|.+|...++++|+..|+.|.|||+++...++.++|+++||+++ |++|.+++.++.++|++|+.++.+.+|++
T Consensus 1512 l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRe 1591 (2376)
T KOG1202|consen 1512 LASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKRE 1591 (2376)
T ss_pred hcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHH
Confidence 45678999999999999999999999999999999999999999999966 99999999999999999999999999999
Q ss_pred HHHHHcC---CCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccC-ccccc
Q 030694 81 EAVERLG---ADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELP-AFPLL 151 (173)
Q Consensus 81 ~~~~~~g---~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~~~~ 151 (173)
++++.|. ...+-|.++.++.+-+. +|+|+|++....+ .++.+++||+..||+..+|-.+-+.+.+ .+..+
T Consensus 1592 fL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavf 1670 (2376)
T KOG1202|consen 1592 FLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVF 1670 (2376)
T ss_pred HHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhh
Confidence 9999776 56677877766544332 2999999999998 5999999999999999999655333333 35677
Q ss_pred cCcccceeeec
Q 030694 152 TGEEEDSWWQS 162 (173)
Q Consensus 152 ~~~~~~~~~~~ 162 (173)
.++.+++....
T Consensus 1671 LkNvsfHGiLL 1681 (2376)
T KOG1202|consen 1671 LKNVSFHGILL 1681 (2376)
T ss_pred hcccceeeeeh
Confidence 77877666543
No 56
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.81 E-value=6.5e-19 Score=134.97 Aligned_cols=154 Identities=22% Similarity=0.310 Sum_probs=123.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhC---CCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYG---LDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~---~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
++|++.++++|+++++++++.+++++.|||+++.... ....+++|+|+|+ |.+|.+++++++.+|++|++++++++
T Consensus 103 ~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (326)
T cd08289 103 RVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD 182 (326)
T ss_pred EEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence 4677899999999999999999999999998885432 2345789999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+++.+++ +|.+.++++.+.. .+.+.. +++|++||++|+. .+...+++++++|+++.+|.... ..+++...++.+
T Consensus 183 ~~~~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~ 260 (326)
T cd08289 183 AADYLKK-LGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILR 260 (326)
T ss_pred HHHHHHH-cCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhc
Confidence 9999987 9998888776532 122222 3799999999986 68999999999999999996543 234445555555
Q ss_pred cccc
Q 030694 154 EEED 157 (173)
Q Consensus 154 ~~~~ 157 (173)
+...
T Consensus 261 ~~~~ 264 (326)
T cd08289 261 GVNL 264 (326)
T ss_pred cceE
Confidence 5543
No 57
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.81 E-value=7.2e-19 Score=135.32 Aligned_cols=135 Identities=19% Similarity=0.313 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~ 74 (173)
+++++.++++|+++++++++.+++++.|||+++.....+.+ +++|+|+|+ |++|.+++|+++.+ |++|+++++
T Consensus 103 ~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~ 182 (336)
T TIGR02817 103 LVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATAS 182 (336)
T ss_pred EEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcC
Confidence 46778899999999999999999999999999977666666 999999997 99999999999998 999999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh--HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
++++.+.+++ +|+++++++... ..+.+.. +++|+++|++++.......+++++++|+++.++
T Consensus 183 ~~~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~ 247 (336)
T TIGR02817 183 RPESQEWVLE-LGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALID 247 (336)
T ss_pred cHHHHHHHHH-cCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEc
Confidence 9999999977 999999885541 2222232 379999999876557889999999999999885
No 58
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.81 E-value=8.7e-19 Score=135.49 Aligned_cols=149 Identities=28% Similarity=0.360 Sum_probs=123.4
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL 86 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~ 86 (173)
+++++|++++.++++.++..+.|||+++.....+.++++++|+|+|.+|.+++++++..|++|+++.+++++.+.+++ +
T Consensus 130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~ 208 (345)
T cd08260 130 NLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELARE-L 208 (345)
T ss_pred ceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-h
Confidence 899999999999999999999999999877677789999999999999999999999999999999999999999987 9
Q ss_pred CCCEEeeCCC-hHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC---cccCccccccCccc
Q 030694 87 GADSFLVSRD-QDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP---LELPAFPLLTGEEE 156 (173)
Q Consensus 87 g~~~v~~~~~-~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~ 156 (173)
|.+.++++.. .+..+.+ . +++|++|||+|........+++++++|+++.+|..... ..++...++.++..
T Consensus 209 g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 286 (345)
T cd08260 209 GAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELE 286 (345)
T ss_pred CCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccE
Confidence 9998988876 4433332 2 27999999999755688999999999999999965432 34444444444443
No 59
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.81 E-value=1.1e-18 Score=133.49 Aligned_cols=153 Identities=22% Similarity=0.256 Sum_probs=127.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||+++.....+.++++++|+|+ |.+|.+++++++.+|++++++.+++++++
T Consensus 98 ~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 177 (323)
T cd05282 98 VAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVE 177 (323)
T ss_pred ecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHH
Confidence 45677899999999999999999999999999988777789999999998 89999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++. .++|+++||+|+. .....+++++++|+++.+|.... ...++...+..++
T Consensus 178 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 255 (323)
T cd05282 178 ELKA-LGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKD 255 (323)
T ss_pred HHHh-cCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcC
Confidence 9977 9998888887654433332 3799999999998 46788999999999999986544 2345555554355
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 256 ~~ 257 (323)
T cd05282 256 IT 257 (323)
T ss_pred ce
Confidence 44
No 60
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.81 E-value=1.3e-18 Score=134.08 Aligned_cols=153 Identities=27% Similarity=0.478 Sum_probs=122.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~ 80 (173)
++|.++++++|+++++++++.++..+.|||+++ ....++++++|+|+|+|++|.+++++++. .|++|+++++++++++
T Consensus 123 ~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~ 201 (338)
T PRK09422 123 IVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLA 201 (338)
T ss_pred EEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHH
Confidence 456778999999999999999999999999998 44556999999999999999999999998 4999999999999999
Q ss_pred HHHHHcCCCEEeeCCC-hH---HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRD-QD---EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~-~~---~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.++++.. .+ .+.+..+++|.++.+.+....+..++++++++|+++.+|.......++...+..+...
T Consensus 202 ~~~~-~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 280 (338)
T PRK09422 202 LAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIE 280 (338)
T ss_pred HHHH-cCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcE
Confidence 9977 99988888754 22 2333345789555555555578999999999999999986544444555455545444
No 61
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.81 E-value=1.4e-18 Score=134.78 Aligned_cols=134 Identities=19% Similarity=0.248 Sum_probs=115.1
Q ss_pred ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH
Q 030694 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (173)
..++++|+++++++++.++..+.|||+++.. ..++++++|+|+|+|++|++++|+++.+|+ +|+++++++++.+.+++
T Consensus 131 ~~~~~lP~~~~~~~aa~~~~~~~ta~~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~ 209 (351)
T cd08285 131 ANLAPLPDGLTDEQAVMLPDMMSTGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKE 209 (351)
T ss_pred CceEECCCCCCHHHhhhhccchhhHHHHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 3799999999999999999999999999744 456899999999889999999999999999 58888899999988888
Q ss_pred HcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 85 RLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 85 ~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+|.+.++++...+..++ .. .++|+++||+|+...+..++++++++|+++.+|....
T Consensus 210 -~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 270 (351)
T cd08285 210 -YGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE 270 (351)
T ss_pred -cCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC
Confidence 99998988765443332 22 3799999999987678999999999999999997654
No 62
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.80 E-value=2e-18 Score=132.10 Aligned_cols=153 Identities=24% Similarity=0.292 Sum_probs=124.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCC--C-CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD--K-PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~--~-~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.+|.++++++|+++++++++.+++.+.|||+++...... . .+++|+|+|+ |.+|++++++++.+|++|++++++++
T Consensus 103 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (325)
T cd05280 103 RVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182 (325)
T ss_pred EEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 567789999999999999999999999999998665432 4 4579999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChH--HHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 78 KKSEAVERLGADSFLVSRDQD--EMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~--~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+++.+++ +|.++++++.+.. ..+... +++|++||++|+. .+...+++++++|+++.+|.... +..++...++.+
T Consensus 183 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 260 (325)
T cd05280 183 QADYLKS-LGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILR 260 (325)
T ss_pred HHHHHHh-cCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheee
Confidence 9999987 9998888766432 122222 3799999999997 68999999999999999996543 234555555455
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
+..
T Consensus 261 ~~~ 263 (325)
T cd05280 261 GVS 263 (325)
T ss_pred eeE
Confidence 554
No 63
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.80 E-value=1.2e-18 Score=134.37 Aligned_cols=154 Identities=22% Similarity=0.290 Sum_probs=125.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---- 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---- 76 (173)
.+|.++++++|+++++++++.+++.+.|||+++.....++++++|+|+|+ |++|++++++++..|++++++..++
T Consensus 106 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~ 185 (341)
T cd08290 106 VVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLE 185 (341)
T ss_pred eccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcch
Confidence 46778999999999999999999999999999987777789999999998 9999999999999999999988876
Q ss_pred chHHHHHHHcCCCEEeeCCCh---HHHHH---hcC-CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcc
Q 030694 77 SKKSEAVERLGADSFLVSRDQ---DEMQA---AMG-TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAF 148 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~---~~~~~---~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~ 148 (173)
++.+.+++ +|+++++++... +..+. ..+ ++|++|||+|+. .+...+++++++|+++.+|.... ...++..
T Consensus 186 ~~~~~~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 263 (341)
T cd08290 186 ELKERLKA-LGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTS 263 (341)
T ss_pred hHHHHHHh-cCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHH
Confidence 56788876 999998887653 33222 222 699999999998 57789999999999999985432 3345554
Q ss_pred ccccCcccc
Q 030694 149 PLLTGEEED 157 (173)
Q Consensus 149 ~~~~~~~~~ 157 (173)
.++.++..+
T Consensus 264 ~~~~~~~~~ 272 (341)
T cd08290 264 LLIFKDITL 272 (341)
T ss_pred HHhhCCceE
Confidence 556666653
No 64
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.80 E-value=1.1e-18 Score=134.99 Aligned_cols=151 Identities=25% Similarity=0.277 Sum_probs=120.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++++.++++|+++++++++.+ ..+.+|++++ ....++++++++|.|+|++|.+++++++.+|++ |+++.+++++.+
T Consensus 124 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~ 201 (343)
T cd05285 124 NHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLE 201 (343)
T ss_pred EecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4667889999999999998766 5778899987 556669999999998899999999999999997 899988999998
Q ss_pred HHHHHcCCCEEeeCCChHH------HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQDE------MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~------~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 152 (173)
.+++ +|++.++++.+.+. +.+.. +++|++|||+|....+...+++++++|+++.+|..+....++...+..
T Consensus 202 ~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 280 (343)
T cd05285 202 FAKE-LGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASL 280 (343)
T ss_pred HHHH-cCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhh
Confidence 8877 89999888775432 22222 269999999998656889999999999999998654433444444444
Q ss_pred Ccc
Q 030694 153 GEE 155 (173)
Q Consensus 153 ~~~ 155 (173)
+..
T Consensus 281 ~~~ 283 (343)
T cd05285 281 REI 283 (343)
T ss_pred CCc
Confidence 444
No 65
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.80 E-value=1.2e-18 Score=134.71 Aligned_cols=151 Identities=25% Similarity=0.261 Sum_probs=121.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++++++++.|||+++. ...++++++++|+|+ |++|++++++++.+|++++++++++ +++
T Consensus 138 ~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~ 215 (350)
T cd08274 138 VVPAENAYPVNSPLSDVELATFPCSYSTAENMLE-RAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEE 215 (350)
T ss_pred EecHHHceeCCCCCCHHHHHhcccHHHHHHHHHh-hcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhH
Confidence 4567789999999999999999999999999984 455689999999998 9999999999999999999888765 788
Q ss_pred HHHHHcCCCEEeeCCChHHHH-Hh-c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQ-AA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~-~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.+++........ .. . +++|++||++|+. .+..++++++++|+++.+|...+. ..++...++.++..
T Consensus 216 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 293 (350)
T cd08274 216 AVRA-LGADTVILRDAPLLADAKALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLT 293 (350)
T ss_pred HHHh-cCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceE
Confidence 8876 9987666654432211 11 2 3799999999987 689999999999999999865443 45666665666654
No 66
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.79 E-value=3e-18 Score=133.51 Aligned_cols=153 Identities=26% Similarity=0.390 Sum_probs=126.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.|||.++.....+.++++++|+|+|.+|.+++++++..|++ |+++.+++++.+
T Consensus 142 ~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~ 221 (363)
T cd08279 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLE 221 (363)
T ss_pred EeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHH
Confidence 4677899999999999999999999999999988777789999999997799999999999999995 999999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC--CCcccCccccccC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE--KPLELPAFPLLTG 153 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~ 153 (173)
.+++ +|.++++++...+...+ .. +++|+++|++++...+...+++++++|+++.+|..+ ....++...+..+
T Consensus 222 ~~~~-~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 300 (363)
T cd08279 222 LARR-FGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLS 300 (363)
T ss_pred HHHH-hCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhc
Confidence 8876 99988888766443333 32 379999999997657889999999999999998654 2345555555444
Q ss_pred cc
Q 030694 154 EE 155 (173)
Q Consensus 154 ~~ 155 (173)
..
T Consensus 301 ~~ 302 (363)
T cd08279 301 EK 302 (363)
T ss_pred Cc
Confidence 33
No 67
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.79 E-value=2.6e-18 Score=130.91 Aligned_cols=137 Identities=25% Similarity=0.313 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.|||+++.....++++++++|+|+ |++|.+++++++.+|++|+++++++++.+
T Consensus 102 ~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 181 (320)
T cd08243 102 LVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAA 181 (320)
T ss_pred EcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999988887799999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCC--hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRD--QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~--~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+++++... .+.+.+..+++|+++|++|+. .+...+++++++|+++.+|...
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (320)
T cd08243 182 LLKE-LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGGIVCMTGLLG 241 (320)
T ss_pred HHHh-cCCcEEEecCccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCCEEEEEccCC
Confidence 9977 99888765422 122333334899999999986 6899999999999999998643
No 68
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.79 E-value=2.5e-18 Score=131.97 Aligned_cols=151 Identities=23% Similarity=0.290 Sum_probs=125.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
++|.++++++|++++.++++.+++++.|||+++.....++++++++|+|+ |.+|++++++++.+|++++++.+++++.+
T Consensus 100 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 179 (334)
T PTZ00354 100 VAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVD 179 (334)
T ss_pred EecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778999999999999999999999999999988777799999999997 99999999999999999888999999999
Q ss_pred HHHHHcCCCEEeeCCChH-HHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-Ccc-cCcccccc
Q 030694 81 EAVERLGADSFLVSRDQD-EMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLE-LPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~-~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~-~~~~~~~~ 152 (173)
.+++ +|.+.++++...+ ..++ .. .++|++||++|+. .+..++++++++|+++.+|...+ ... ++...++.
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~ 257 (334)
T PTZ00354 180 FCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLR 257 (334)
T ss_pred HHHH-cCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHh
Confidence 9977 9998888876543 3332 22 3799999999976 68899999999999999986543 222 55555554
Q ss_pred Cc
Q 030694 153 GE 154 (173)
Q Consensus 153 ~~ 154 (173)
+.
T Consensus 258 ~~ 259 (334)
T PTZ00354 258 KR 259 (334)
T ss_pred hC
Confidence 54
No 69
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.79 E-value=4.4e-18 Score=130.27 Aligned_cols=153 Identities=24% Similarity=0.304 Sum_probs=122.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCC--CCCCC-EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGL--DKPGM-HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~--~~~g~-~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
.+|.+.++++|+++++++++.+++.+.+|+.++..... +.+++ +++|+|+ |.+|.+++++++.+|++++++..+++
T Consensus 102 ~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~ 181 (323)
T TIGR02823 102 RVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAE 181 (323)
T ss_pred EEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 46778999999999999999999999999888754332 57888 9999998 99999999999999999999988888
Q ss_pred hHHHHHHHcCCCEEeeCCChHH-HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDE-MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~-~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
+.+.+++ +|.+.+++..+.+. ..... +++|.++||+|+. .+...+++++++|+++.+|.... ...++...++.++
T Consensus 182 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 259 (323)
T TIGR02823 182 EEDYLKE-LGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRG 259 (323)
T ss_pred HHHHHHh-cCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcc
Confidence 8888876 99888887655332 22332 3699999999988 58899999999999999996543 2334445554555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 260 ~~ 261 (323)
T TIGR02823 260 VS 261 (323)
T ss_pred eE
Confidence 54
No 70
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.79 E-value=3.8e-18 Score=130.49 Aligned_cols=153 Identities=25% Similarity=0.285 Sum_probs=124.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+++.+.|||. +.....++++++++|+|+ |.+|.+++++++.+|++|+++++++++.+
T Consensus 103 ~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~ 181 (324)
T cd08244 103 VADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA 181 (324)
T ss_pred EEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4677899999999999999999999999964 444556689999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
.+++ +|.+.++++...+..+.+ . .++|+++|++|+. ....++++++++|+++.+|..+.. ..++...++.++
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 259 (324)
T cd08244 182 LVRA-LGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRG 259 (324)
T ss_pred HHHH-cCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCC
Confidence 9977 998888887665433332 2 2799999999998 478999999999999999865432 244544555555
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
..+
T Consensus 260 ~~~ 262 (324)
T cd08244 260 VTV 262 (324)
T ss_pred cEE
Confidence 543
No 71
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.79 E-value=4.1e-18 Score=131.35 Aligned_cols=150 Identities=26% Similarity=0.314 Sum_probs=119.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++++ ++++|+++++++++.+ ..+.++++++ ....+.++++|||+|+|.+|.+++++++.+|++|+++.+++++.+.
T Consensus 122 ~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~ 198 (337)
T cd08261 122 VVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEF 198 (337)
T ss_pred Eechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHH
Confidence 46677 9999999999998866 5677888887 5566789999999988999999999999999999999999999998
Q ss_pred HHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 82 AVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
+++ +|.++++++...+..+. .. .++|+++||+|+...+..++++|+++|+++.+|..+....++...+..+..
T Consensus 199 ~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~ 276 (337)
T cd08261 199 ARE-LGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKEL 276 (337)
T ss_pred HHH-hCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCC
Confidence 877 89999988876443332 22 269999999988657889999999999999998655433444444444443
No 72
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.79 E-value=1.8e-18 Score=136.30 Aligned_cols=152 Identities=21% Similarity=0.237 Sum_probs=123.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHh--hCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRF--YGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~ 78 (173)
+++.++++++|+++++++++.+.+.+.|||+++.. ...+.++++++|+|+ |.+|++++++++.+|++++++++++++
T Consensus 147 ~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~ 226 (398)
T TIGR01751 147 LVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK 226 (398)
T ss_pred EechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence 46678899999999999999999999999999865 355688999999998 999999999999999999998888999
Q ss_pred HHHHHHHcCCCEEeeCCChH----------------------H---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCC
Q 030694 79 KSEAVERLGADSFLVSRDQD----------------------E---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQG 131 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~----------------------~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G 131 (173)
.+.+++ +|++.++|+...+ + +.+.. +++|++|||+|.. .+...+++++++|
T Consensus 227 ~~~~~~-~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G 304 (398)
T TIGR01751 227 AEYCRE-LGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGG 304 (398)
T ss_pred HHHHHH-cCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCC
Confidence 999988 9999998875421 1 11122 3699999999976 6889999999999
Q ss_pred EEEEeCCCCCC-cccCccccccCcc
Q 030694 132 KLVLLGAPEKP-LELPAFPLLTGEE 155 (173)
Q Consensus 132 ~~v~~g~~~~~-~~~~~~~~~~~~~ 155 (173)
+++.+|..++. ..++...+..+..
T Consensus 305 ~~v~~g~~~~~~~~~~~~~~~~~~~ 329 (398)
T TIGR01751 305 MVVICGGTTGYNHDYDNRYLWMRQK 329 (398)
T ss_pred EEEEEccccCCCCCcCHHHHhhccc
Confidence 99999976542 3444444444443
No 73
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.78 E-value=3.5e-18 Score=131.98 Aligned_cols=148 Identities=22% Similarity=0.313 Sum_probs=118.9
Q ss_pred ceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHH
Q 030694 6 HFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVE 84 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~ 84 (173)
+.++++|+++++++++++++++.|||+++.. ..+.++++|+|+|+|.+|.+++++++.+|+ +|+++++++++.+.+++
T Consensus 132 ~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~ 210 (344)
T cd08284 132 GTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAA 210 (344)
T ss_pred CceEECCCCCCHHHhhhhcCchHHHHhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 4999999999999999999999999999976 456889999999889999999999999997 89999888888888877
Q ss_pred HcCCCEEeeCCChHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCccc
Q 030694 85 RLGADSFLVSRDQDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 85 ~~g~~~v~~~~~~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
+|+. .++....++ +.++. +++|++||++|+...+...+++++++|+++.+|..+. ....+....+.++..
T Consensus 211 -~g~~-~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 286 (344)
T cd08284 211 -LGAE-PINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLT 286 (344)
T ss_pred -hCCe-EEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcE
Confidence 9975 455554333 22222 3799999999986678899999999999999996653 233444445555554
No 74
>PRK10083 putative oxidoreductase; Provisional
Probab=99.78 E-value=4.3e-18 Score=131.27 Aligned_cols=151 Identities=20% Similarity=0.142 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHH-CCCe-EEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKA-MGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~-v~~~~~~~~~~ 79 (173)
+++.+.++++|+++++++++ +...+.+++++.. ...++++++|+|+|+|++|++++|+++. +|++ +++++++++|.
T Consensus 122 ~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~~~-~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~ 199 (339)
T PRK10083 122 VVPAKNAHRIPDAIADQYAV-MVEPFTIAANVTG-RTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERL 199 (339)
T ss_pred EechHHeEECcCCCCHHHHh-hhchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHH
Confidence 46778899999999988765 6677788886554 4456899999999999999999999996 6995 77788888999
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHhcC---CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAAMG---TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~~~---~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
+.+++ +|++.++++.+.+..+.+.+ ++|++||++|....+..++++++++|+++.+|.......++...+..+..
T Consensus 200 ~~~~~-~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (339)
T PRK10083 200 ALAKE-SGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKEL 277 (339)
T ss_pred HHHHH-hCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcce
Confidence 88888 99999988776544444432 46799999997667899999999999999999655433344444443433
No 75
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.78 E-value=4.9e-18 Score=131.21 Aligned_cols=138 Identities=22% Similarity=0.311 Sum_probs=116.2
Q ss_pred ccccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch
Q 030694 2 VADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK 78 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~ 78 (173)
+++.+ +++++|++++.++++.+++++.|||+++ ....++++++|+|.|+|.+|.+++|+++.+|+ +++++++++++
T Consensus 126 ~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~ 204 (347)
T cd05278 126 RVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPER 204 (347)
T ss_pred EecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence 34555 8999999999999999999999999998 45567899999998779999999999999997 88888888888
Q ss_pred HHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 79 KSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 79 ~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.+++ +|.+.++++...+..+.+ . +++|++||++|+...+..++++|+++|+++.+|...+
T Consensus 205 ~~~~~~-~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 271 (347)
T cd05278 205 LDLAKE-AGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK 271 (347)
T ss_pred HHHHHH-hCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 888887 898889888765443332 2 3799999999985468899999999999999985543
No 76
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.78 E-value=8.1e-18 Score=129.75 Aligned_cols=151 Identities=23% Similarity=0.305 Sum_probs=119.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.++++. ..++++||+++.....+ ++++|+|.|+|.+|.+++++++.+|+ +++++++++++.+
T Consensus 127 ~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~ 204 (339)
T cd08232 127 VVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLA 204 (339)
T ss_pred EechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 467788999999999988764 67888999999887775 89999998889999999999999999 8999998888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.+.++++...+ ..+. .+++|+++|++|+...++..+++|+++|+++.+|..+.....+...++.++..
T Consensus 205 ~~~~-~g~~~vi~~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 281 (339)
T cd08232 205 VARA-MGADETVNLARDP-LAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELD 281 (339)
T ss_pred HHHH-cCCCEEEcCCchh-hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceE
Confidence 7777 8988888876544 2222 23699999999975568899999999999999985443333344444444443
No 77
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.78 E-value=6.1e-18 Score=132.88 Aligned_cols=152 Identities=21% Similarity=0.171 Sum_probs=120.0
Q ss_pred cccc--eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchH
Q 030694 3 ADEH--FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKK 79 (173)
Q Consensus 3 ~~~~--~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~ 79 (173)
++.+ .++++|+++++++++.++..+.|||+++ ....+.++++|+|+|+|.+|.+++++++..|+ +|+++++++++.
T Consensus 144 v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~ 222 (386)
T cd08283 144 VPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERL 222 (386)
T ss_pred cccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 4555 8999999999999999999999999999 55667899999999889999999999999998 599999999999
Q ss_pred HHHHHHcCCCEEeeCCChH-HHHHh---c--CCccEEEEcCCCc---------------------cchHHHHHhhhcCCE
Q 030694 80 SEAVERLGADSFLVSRDQD-EMQAA---M--GTMDGIIDTVSAV---------------------HPLMPLIGLLKSQGK 132 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~-~~~~~---~--~~~d~vid~~g~~---------------------~~~~~~~~~l~~~G~ 132 (173)
+.+++ ++...++++...+ ..+.+ . +++|++||++|+. ..+..++++++++|+
T Consensus 223 ~~~~~-~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~ 301 (386)
T cd08283 223 EMARS-HLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGT 301 (386)
T ss_pred HHHHH-cCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCE
Confidence 99998 6433567766542 33333 2 2799999999863 246789999999999
Q ss_pred EEEeCCCCC-CcccCccccccCccc
Q 030694 133 LVLLGAPEK-PLELPAFPLLTGEEE 156 (173)
Q Consensus 133 ~v~~g~~~~-~~~~~~~~~~~~~~~ 156 (173)
++.+|.... ...++...++.+...
T Consensus 302 iv~~g~~~~~~~~~~~~~~~~~~~~ 326 (386)
T cd08283 302 VSIIGVYGGTVNKFPIGAAMNKGLT 326 (386)
T ss_pred EEEEcCCCCCcCccCHHHHHhCCcE
Confidence 999986554 233444444555554
No 78
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.78 E-value=6.3e-18 Score=133.03 Aligned_cols=136 Identities=21% Similarity=0.268 Sum_probs=107.0
Q ss_pred ccccc--eeEECCCCCCc----ccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeE-EEEeC
Q 030694 2 VADEH--FVVRIPEGAPL----DATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKV-TVIST 74 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~----~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v-~~~~~ 74 (173)
++|.. .++++|++++. ++++++.+.+.++|+++.+ ..++++++|+|.|+|++|++++|+++.+|+++ +++++
T Consensus 140 ~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~ 218 (393)
T TIGR02819 140 MVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDL 218 (393)
T ss_pred EechhhCceEECCCcccccccccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCC
Confidence 45543 69999998653 3567888899999999876 45589999999888999999999999999974 44567
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh---HHHHHhcC--CccEEEEcCCCc--------------cchHHHHHhhhcCCEEEE
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ---DEMQAAMG--TMDGIIDTVSAV--------------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~~~--~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~v~ 135 (173)
+++|++.+++ +|++.+.+..+. +.+.+..+ ++|++||++|.+ ..+++++++++++|+++.
T Consensus 219 ~~~r~~~a~~-~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~ 297 (393)
T TIGR02819 219 NPARLAQARS-FGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGI 297 (393)
T ss_pred CHHHHHHHHH-cCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEE
Confidence 7889999998 998754332222 22333332 799999999986 368999999999999999
Q ss_pred eCCC
Q 030694 136 LGAP 139 (173)
Q Consensus 136 ~g~~ 139 (173)
+|..
T Consensus 298 ~G~~ 301 (393)
T TIGR02819 298 PGLY 301 (393)
T ss_pred eeec
Confidence 9986
No 79
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.78 E-value=1.1e-17 Score=128.69 Aligned_cols=152 Identities=22% Similarity=0.309 Sum_probs=124.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCC-----CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeC
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKP-----GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVIST 74 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-----g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~ 74 (173)
.++.++++++|++++.++++.+++.+.|||+++.+...+.+ +++++|+|+ |++|++++++++.+| ++|+++++
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~ 183 (336)
T cd08252 104 LVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATAS 183 (336)
T ss_pred EEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcC
Confidence 45778899999999999999999999999999877666666 999999997 999999999999999 89999999
Q ss_pred CcchHHHHHHHcCCCEEeeCCCh--HHHHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 75 SPSKKSEAVERLGADSFLVSRDQ--DEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 75 ~~~~~~~~~~~~g~~~v~~~~~~--~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
++++.+.+++ +|.++++++... ..+.... +++|++||++|+...+..++++++++|+++.+|... ..++...+.
T Consensus 184 ~~~~~~~~~~-~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~ 260 (336)
T cd08252 184 RPESIAWVKE-LGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLK 260 (336)
T ss_pred ChhhHHHHHh-cCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--Ccccchhhh
Confidence 9999999977 999888887641 1222222 379999999997557899999999999999998543 344555554
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
.++..
T Consensus 261 ~~~~~ 265 (336)
T cd08252 261 SKSAS 265 (336)
T ss_pred cccce
Confidence 45554
No 80
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.78 E-value=6.4e-18 Score=129.64 Aligned_cols=139 Identities=30% Similarity=0.336 Sum_probs=117.0
Q ss_pred cccc-ceeEECCCCCC--cccccc-hhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADE-HFVVRIPEGAP--LDATAP-LLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.++. +.++++|++++ ++++++ +++.+.|||+++.....+.++++++|+|+ |++|.+++++++..|++|+++++++
T Consensus 101 ~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 101 VVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred EecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 4577 88999999985 444445 99999999999988777789999999997 9999999999999999999999999
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++.+.+++.+|.+.++++.+.+..+++. +++|++|||+|+. .+..++++++++|+++.+|..+.
T Consensus 181 ~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 248 (329)
T cd05288 181 EKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAALTLLNKGGRIALCGAISQ 248 (329)
T ss_pred HHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHHHHhcCCCceEEEEeeccC
Confidence 9988887768988888877654433322 4799999999987 68899999999999999986543
No 81
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.78 E-value=5.7e-18 Score=130.73 Aligned_cols=152 Identities=20% Similarity=0.253 Sum_probs=120.7
Q ss_pred ccccce-----eEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCC
Q 030694 2 VADEHF-----VVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTS 75 (173)
Q Consensus 2 ~~~~~~-----~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~ 75 (173)
++|.++ ++++|+++++++++.+ ..+.+||+++... .++++++|+|+|+|.+|.+++++++..|++ |+++.++
T Consensus 122 ~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s 199 (343)
T cd08235 122 RVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLN 199 (343)
T ss_pred EecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 345556 9999999999988765 7889999999765 679999999998899999999999999998 9888899
Q ss_pred cchHHHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC--cccCcc
Q 030694 76 PSKKSEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP--LELPAF 148 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~ 148 (173)
+++.+.+++ +|.++++++.+.+..+++ . +++|+++||+++...+...+++++++|+++.+|..... ..++..
T Consensus 200 ~~~~~~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~ 278 (343)
T cd08235 200 EFRLEFAKK-LGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPN 278 (343)
T ss_pred HHHHHHHHH-hCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHH
Confidence 999998876 898888888765543332 2 26999999999765688999999999999999864432 334434
Q ss_pred ccccCccc
Q 030694 149 PLLTGEEE 156 (173)
Q Consensus 149 ~~~~~~~~ 156 (173)
.+..+...
T Consensus 279 ~~~~~~~~ 286 (343)
T cd08235 279 LIHYREIT 286 (343)
T ss_pred HHhhCceE
Confidence 44444443
No 82
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.77 E-value=1.2e-17 Score=128.23 Aligned_cols=152 Identities=45% Similarity=0.727 Sum_probs=123.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.+|.++++++|+++++++++.+++.+.|||+++.. ..++++++++|+|+|.+|.+++++++..|++|+++.+++++.+.
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~ 201 (330)
T cd08245 123 VADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKREL 201 (330)
T ss_pred EEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46778899999999999999999999999999976 45689999999988889999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCcc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGEE 155 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~ 155 (173)
+++ +|.+.+++....+......+++|+++++++.......++++++++|+++.+|..... ..++..+++.++.
T Consensus 202 ~~~-~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~ 275 (330)
T cd08245 202 ARK-LGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQ 275 (330)
T ss_pred HHH-hCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCC
Confidence 977 898888776544333323347999999988766788999999999999999865332 2222344444444
No 83
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.77 E-value=9.4e-18 Score=129.61 Aligned_cols=138 Identities=26% Similarity=0.276 Sum_probs=117.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCC----------CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEE
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD----------KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVT 70 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~----------~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~ 70 (173)
.+|.+.++++|+++++++++.+++.+.|||+++.....+ .++++++|+|+ |.+|++++++++..|++|+
T Consensus 104 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~ 183 (339)
T cd08249 104 VADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVI 183 (339)
T ss_pred EechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEE
Confidence 467788999999999999999999999999998765433 68999999998 8999999999999999999
Q ss_pred EEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---c-CCccEEEEcCCCccchHHHHHhhhc--CCEEEEeCCCCC
Q 030694 71 VISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---M-GTMDGIIDTVSAVHPLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 71 ~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~-~~~d~vid~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++. ++++++.+++ +|.+.++++...+..+.+ . +++|++||++|.+..+..+++++++ +|+++.+|....
T Consensus 184 ~~~-~~~~~~~~~~-~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~ 258 (339)
T cd08249 184 TTA-SPKNFDLVKS-LGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPE 258 (339)
T ss_pred EEE-CcccHHHHHh-cCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCc
Confidence 888 5688888877 999889888765443333 2 3799999999985578999999999 999999986543
No 84
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.77 E-value=1.4e-17 Score=128.46 Aligned_cols=137 Identities=22% Similarity=0.293 Sum_probs=111.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++ ++..+.+||+++ ....++++++|+|+|+|++|.+++|+++.+|++ ++++++++++.+
T Consensus 123 ~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 200 (341)
T cd08262 123 LLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRA 200 (341)
T ss_pred EechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 56778999999999998776 778889999986 455668999999998899999999999999996 666777888888
Q ss_pred HHHHHcCCCEEeeCCChHHH------HHh-c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEM------QAA-M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~------~~~-~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.++++++...+.. ... . +++|++||++|+...+..++++++++|+++.+|....
T Consensus 201 ~~~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~ 268 (341)
T cd08262 201 LALA-MGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME 268 (341)
T ss_pred HHHH-cCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC
Confidence 8877 998888887654211 111 1 3799999999985467889999999999999986643
No 85
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.77 E-value=1e-17 Score=129.43 Aligned_cols=136 Identities=24% Similarity=0.383 Sum_probs=114.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++.+ ..+.|||+++. ...++++++|+|+|+|.+|.+++++++.+|++ |+++++++++.+
T Consensus 121 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~ 198 (343)
T cd08236 121 SVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLA 198 (343)
T ss_pred EechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 4677899999999999998877 67789999987 45568999999998899999999999999997 999999988888
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.+.++++.+.. .++ ..+ ++|++|||+|....+..++++|+++|+++.+|...+
T Consensus 199 ~l~~-~g~~~~~~~~~~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 262 (343)
T cd08236 199 VARE-LGADDTINPKEED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYG 262 (343)
T ss_pred HHHH-cCCCEEecCcccc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC
Confidence 8876 8988888876543 322 222 699999999876678899999999999999996544
No 86
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.77 E-value=5.3e-18 Score=130.03 Aligned_cols=148 Identities=26% Similarity=0.350 Sum_probs=118.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.+||+++.. ..++++++++|+|+ |++|++++++++.+|++|+++.+ .+
T Consensus 123 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~ 197 (325)
T cd08264 123 VVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KD 197 (325)
T ss_pred EcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HH
Confidence 45677899999999999999999999999999976 56699999999998 99999999999999999888863 36
Q ss_pred HHHHHcCCCEEeeCCCh-HHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC-CCcccCccccccCccc
Q 030694 81 EAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELPAFPLLTGEEE 156 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~ 156 (173)
.+++ +|.++++++.+. +.+.+..+++|++++++|.. .+...+++++++|+++.+|... ....++...++.+...
T Consensus 198 ~~~~-~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~ 273 (325)
T cd08264 198 WLKE-FGADEVVDYDEVEEKVKEITKMADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQIS 273 (325)
T ss_pred HHHH-hCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcE
Confidence 6666 898888876542 22222336899999999986 7899999999999999998642 2345565555544443
No 87
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.77 E-value=4.3e-19 Score=119.11 Aligned_cols=113 Identities=33% Similarity=0.438 Sum_probs=98.1
Q ss_pred hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---cC--CccEEEEcCCCccchHHHHHhh
Q 030694 53 GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---MG--TMDGIIDTVSAVHPLMPLIGLL 127 (173)
Q Consensus 53 ~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~--~~d~vid~~g~~~~~~~~~~~l 127 (173)
++|++++|+++..|++|++++++++|++.+++ +|+++++++++.+..+++ .+ ++|++|||+|....++.++.++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~-~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l 79 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKE-LGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL 79 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-TTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHh-hcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence 58999999999999999999999999999999 999999999887554444 33 7999999999777899999999
Q ss_pred hcCCEEEEeCCCC-CCcccCccccccCcccceeeeccccccC
Q 030694 128 KSQGKLVLLGAPE-KPLELPAFPLLTGEEEDSWWQSHWGVEG 168 (173)
Q Consensus 128 ~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (173)
+++|+++.+|... ...+++...++.++++ +.+++.++.+
T Consensus 80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~--i~g~~~~~~~ 119 (130)
T PF00107_consen 80 RPGGRIVVVGVYGGDPISFNLMNLMFKEIT--IRGSWGGSPE 119 (130)
T ss_dssp EEEEEEEEESSTSTSEEEEEHHHHHHTTEE--EEEESSGGHH
T ss_pred ccCCEEEEEEccCCCCCCCCHHHHHhCCcE--EEEEccCCHH
Confidence 9999999999887 5679999999999998 5555555543
No 88
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.77 E-value=1.4e-17 Score=126.37 Aligned_cols=144 Identities=27% Similarity=0.419 Sum_probs=119.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|+++++++++++++.+.|||+++...... ++++++|+|+ |++|.+++++++..|++|+.+++++++.+
T Consensus 93 ~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 171 (305)
T cd08270 93 AVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAE 171 (305)
T ss_pred EEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999887764 5999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCcccccc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLT 152 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~ 152 (173)
.+++ +|.+..++... +. ..+++|+++|++|+. ....++++++++|+++.+|.... ...++...+..
T Consensus 172 ~~~~-~g~~~~~~~~~-~~---~~~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 238 (305)
T cd08270 172 GLRE-LGAAEVVVGGS-EL---SGAPVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVG 238 (305)
T ss_pred HHHH-cCCcEEEeccc-cc---cCCCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhc
Confidence 9988 99766554322 11 124799999999988 68999999999999999986543 23455554444
No 89
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.77 E-value=1.7e-17 Score=128.63 Aligned_cols=143 Identities=17% Similarity=0.186 Sum_probs=114.2
Q ss_pred cccc-eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 3 ADEH-FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 3 ~~~~-~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+|++ .++++|+++++++++.+ ..+.|+|+++ ....++++++|+|.|+|.+|.+++++++.+|++ ++++++++++.+
T Consensus 136 ~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 213 (350)
T cd08256 136 FPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLA 213 (350)
T ss_pred cccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHH
Confidence 4555 57899999999998887 8889999998 555668999999977799999999999999984 677788888888
Q ss_pred HHHHHcCCCEEeeCCChHH---HHHhcC--CccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcc
Q 030694 81 EAVERLGADSFLVSRDQDE---MQAAMG--TMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF 148 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~---~~~~~~--~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 148 (173)
.+.+ +|++.++++...+. +.+..+ ++|++||++|+...+..++++++++|+++.+|.......++..
T Consensus 214 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~ 285 (350)
T cd08256 214 LARK-FGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWS 285 (350)
T ss_pred HHHH-cCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChh
Confidence 7777 99988888765433 333332 6999999999755688999999999999999865543344433
No 90
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.77 E-value=1.6e-17 Score=130.39 Aligned_cols=151 Identities=23% Similarity=0.269 Sum_probs=116.8
Q ss_pred ccccceeEECCCCC-------CcccccchhhHHHHHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEE
Q 030694 2 VADEHFVVRIPEGA-------PLDATAPLLCAGITVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVI 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~~-------~~~~aa~l~~~~~ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~ 72 (173)
+++.+.++++|+.+ +.+ +++++.++.+||+++... ..++++++|+|+|+|++|++++++++..|+ +|+++
T Consensus 156 ~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~ 234 (384)
T cd08265 156 AVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAF 234 (384)
T ss_pred EechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Confidence 46778899999863 344 567888899999998655 567899999999889999999999999999 79999
Q ss_pred eCCcchHHHHHHHcCCCEEeeCCCh---HHHH---Hhc--CCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCCCCCCc
Q 030694 73 STSPSKKSEAVERLGADSFLVSRDQ---DEMQ---AAM--GTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~---~~~--~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
+++++|.+.+++ +|.+.++++.+. ++.+ +.. +++|+++|++|+. ..+..++++++++|+++.+|......
T Consensus 235 ~~~~~~~~~~~~-~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 313 (384)
T cd08265 235 EISEERRNLAKE-MGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTV 313 (384)
T ss_pred cCCHHHHHHHHH-cCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCC
Confidence 988888888888 999888876632 2222 222 2799999999974 35788999999999999998654434
Q ss_pred ccCccccccCc
Q 030694 144 ELPAFPLLTGE 154 (173)
Q Consensus 144 ~~~~~~~~~~~ 154 (173)
.++...+..+.
T Consensus 314 ~~~~~~~~~~~ 324 (384)
T cd08265 314 PLHLEVLQVRR 324 (384)
T ss_pred cccHHHHhhCc
Confidence 44444443333
No 91
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.77 E-value=7.7e-18 Score=129.21 Aligned_cols=137 Identities=23% Similarity=0.293 Sum_probs=118.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.|||.++.....+.++++++|+|+ |.+|.+++++++.+|++|+++++++++.+
T Consensus 100 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~ 179 (327)
T PRK10754 100 NVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQ 179 (327)
T ss_pred EcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46677899999999999999999999999999887777789999999986 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHH---Hhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ---AAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~---~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+ +.. .++|+++||+|+. .....+++++++|+++.+|...
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 242 (327)
T PRK10754 180 RAKK-AGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNAS 242 (327)
T ss_pred HHHH-CCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCC
Confidence 9977 9988888776543322 222 2799999999986 6888999999999999998654
No 92
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.76 E-value=1.8e-17 Score=126.87 Aligned_cols=148 Identities=18% Similarity=0.210 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
++|.++++++|++++.++++.+ ....++|.++ +...++++++++|+|+|.+|.+++|+++.+|++|++++.++++++.
T Consensus 117 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~ 194 (319)
T cd08242 117 TLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLAL 194 (319)
T ss_pred EechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 4677889999999998887753 4445667666 4455689999999988999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCccc
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEE 156 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 156 (173)
+++ +|++.++++... .-.+++|+++||+|+...+..++++++++|+++..+.......++...+..++..
T Consensus 195 ~~~-~g~~~~~~~~~~----~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~ 264 (319)
T cd08242 195 ARR-LGVETVLPDEAE----SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEIT 264 (319)
T ss_pred HHH-cCCcEEeCcccc----ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceE
Confidence 998 998887776432 1224799999999986578899999999999998776554455666555556554
No 93
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.76 E-value=5.4e-18 Score=130.42 Aligned_cols=135 Identities=29% Similarity=0.388 Sum_probs=114.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+++.+.+||+++... .++++++++|+|+ |.+|++++++++..|++++++++++++.+
T Consensus 123 ~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~ 201 (334)
T PRK13771 123 KVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAK 201 (334)
T ss_pred ecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 467789999999999999999999999999999877 6689999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCCh-HHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQ-DEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~-~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ + +++++++... ..+.+. +++|+++||+|+. ....++++++++|+++.+|..+.
T Consensus 202 ~~~~-~-~~~~~~~~~~~~~v~~~-~~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~ 259 (334)
T PRK13771 202 IVSK-Y-ADYVIVGSKFSEEVKKI-GGADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDP 259 (334)
T ss_pred HHHH-H-HHHhcCchhHHHHHHhc-CCCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCC
Confidence 8876 7 6666655411 122222 4799999999997 58899999999999999997543
No 94
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.76 E-value=4.5e-18 Score=134.58 Aligned_cols=148 Identities=19% Similarity=0.253 Sum_probs=110.1
Q ss_pred eeEECCCCCCcccccch---hhHHHHHHHHHH--------hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCC---eEEE
Q 030694 7 FVVRIPEGAPLDATAPL---LCAGITVYSPLR--------FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGV---KVTV 71 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l---~~~~~ta~~~l~--------~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~---~v~~ 71 (173)
.++++|+++++++++.+ ++. .++++++. ....+++|++|+|+|+ |++|++++|+++..|+ +|++
T Consensus 130 ~~~~lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~ 208 (410)
T cd08238 130 DCLLIYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVV 208 (410)
T ss_pred CeEECCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEE
Confidence 58999999999988743 233 23444432 3345689999999986 9999999999999864 7999
Q ss_pred EeCCcchHHHHHHHc--------CCC-EEeeCCC-hHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 72 ISTSPSKKSEAVERL--------GAD-SFLVSRD-QDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 72 ~~~~~~~~~~~~~~~--------g~~-~v~~~~~-~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++++++|++.+++ + |++ .++++.+ .+. +.+.. .++|++||++|.+..+..++++++++|+++.+
T Consensus 209 ~~~~~~r~~~a~~-~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~ 287 (410)
T cd08238 209 TDVNDERLARAQR-LFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFF 287 (410)
T ss_pred EcCCHHHHHHHHH-hccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEE
Confidence 9999999999988 6 655 4677653 222 22332 27999999999877889999999999988776
Q ss_pred CCC-CC--CcccCccccccCccc
Q 030694 137 GAP-EK--PLELPAFPLLTGEEE 156 (173)
Q Consensus 137 g~~-~~--~~~~~~~~~~~~~~~ 156 (173)
+.. .+ ..+++...++.++.+
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~~ 310 (410)
T cd08238 288 AGPVDKNFSAPLNFYNVHYNNTH 310 (410)
T ss_pred EccCCCCccccccHHHhhhcCcE
Confidence 432 22 246777777777776
No 95
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.76 E-value=2.8e-17 Score=127.07 Aligned_cols=149 Identities=22% Similarity=0.293 Sum_probs=116.6
Q ss_pred ceeEECCCCCCccccc-----chhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 6 HFVVRIPEGAPLDATA-----PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 6 ~~~~~~p~~~~~~~aa-----~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
+.++++|++++.+++. ++...+.|||+++.. ..++++++++|.|+|++|++++++++..|++ ++++++++++.
T Consensus 128 ~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~ 206 (345)
T cd08287 128 GTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQ 206 (345)
T ss_pred CceEECCCCCChhhhhhhhhHhhhcHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 3899999999873211 233678899999864 4568999999988899999999999999995 88888888888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCc
Q 030694 80 SEAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGE 154 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 154 (173)
+.+++ +|++.++++...+..+++ . .++|+++|++|+...+..++++++++|+++.+|....+..++....+.++
T Consensus 207 ~~~~~-~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 285 (345)
T cd08287 207 ALARE-FGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRN 285 (345)
T ss_pred HHHHH-cCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcc
Confidence 88887 999999988765444333 2 27999999999876789999999999999999865544455554445555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 286 ~~ 287 (345)
T cd08287 286 VG 287 (345)
T ss_pred eE
Confidence 55
No 96
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.76 E-value=2.6e-17 Score=126.28 Aligned_cols=153 Identities=31% Similarity=0.396 Sum_probs=126.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++.+++.+++.+.+||+++.....++++++++|+|+|++|.+++++++..|++|+++++++++.+.
T Consensus 120 ~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~ 199 (336)
T cd08276 120 VLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLER 199 (336)
T ss_pred EecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence 35677899999999999999999999999999988777799999999987999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCC-hHH---HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCC-cccCccccccCc
Q 030694 82 AVERLGADSFLVSRD-QDE---MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKP-LELPAFPLLTGE 154 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~-~~~---~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~ 154 (173)
+.+ +|.+.+++... .+. +.+.. .++|+++|+++.. ....++++++++|+++.+|..... ...+...++.++
T Consensus 200 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 277 (336)
T cd08276 200 AKA-LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKG 277 (336)
T ss_pred HHH-cCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcc
Confidence 988 89888887654 322 22232 3799999999876 688999999999999999865432 234455555666
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 278 ~~ 279 (336)
T cd08276 278 AT 279 (336)
T ss_pred eE
Confidence 54
No 97
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.75 E-value=5.7e-17 Score=123.38 Aligned_cols=150 Identities=24% Similarity=0.322 Sum_probs=116.5
Q ss_pred ccccceeEECCCCCCcccccchh-hHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLL-CAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~-~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~ 79 (173)
+++++.++++|+++ . .++++ .++.++++++. ...++++++++|+|+|.+|.+++++++..|++ |+++.+++++.
T Consensus 92 ~v~~~~~~~lP~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~ 167 (312)
T cd08269 92 LADADHAVPLPSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARL 167 (312)
T ss_pred EEchhheEECCCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHH
Confidence 56788999999988 2 23344 78889999887 56668999999998899999999999999998 99999998888
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTG 153 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~ 153 (173)
+.+++ +|.+.++++...+..++ .. .++|+++||+|........+++++++|+++.+|.... ...++...+..+
T Consensus 168 ~~~~~-~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~ 246 (312)
T cd08269 168 ALARE-LGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWK 246 (312)
T ss_pred HHHHH-hCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhc
Confidence 87777 99888887654433333 32 3799999999877678899999999999999986542 234444444445
Q ss_pred ccc
Q 030694 154 EEE 156 (173)
Q Consensus 154 ~~~ 156 (173)
...
T Consensus 247 ~~~ 249 (312)
T cd08269 247 GID 249 (312)
T ss_pred CCE
Confidence 443
No 98
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.74 E-value=5e-17 Score=125.53 Aligned_cols=151 Identities=19% Similarity=0.208 Sum_probs=117.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++. ...+.++++++.. ...+|++++|.|+|.+|.+++++++..|+ +|+++.+++++.+
T Consensus 126 ~v~~~~~~~iP~~l~~~~~~~-~~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T PRK05396 126 VIPAFNVWKIPDDIPDDLAAI-FDPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLE 202 (341)
T ss_pred EechHHeEECcCCCCHHHhHh-hhHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 467788999999999888764 4555666655543 23689999998889999999999999999 6888888888888
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+++ +|++++++++..+..+. +. +++|++|||.|....+..++++++++|+++.+|..+....++...+..+..
T Consensus 203 ~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 281 (341)
T PRK05396 203 LARK-MGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGL 281 (341)
T ss_pred HHHH-hCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcce
Confidence 8887 99999988776543333 22 379999999998767899999999999999999765544555555555555
Q ss_pred c
Q 030694 156 E 156 (173)
Q Consensus 156 ~ 156 (173)
.
T Consensus 282 ~ 282 (341)
T PRK05396 282 T 282 (341)
T ss_pred E
Confidence 4
No 99
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.74 E-value=5.4e-17 Score=123.55 Aligned_cols=152 Identities=28% Similarity=0.388 Sum_probs=124.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+||+++.....+.++++++|+|+ |++|.+++++++..|++|+++++++++.+
T Consensus 104 ~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 183 (325)
T cd08253 104 VVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAE 183 (325)
T ss_pred EecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 35667889999999999999999999999999988777789999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccccCcc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+.+ +|.+.+++....+..+. .. +++|++++|+|.. .....+++++++|+++.+|.......++...++.+..
T Consensus 184 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~ 261 (325)
T cd08253 184 LVRQ-AGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEA 261 (325)
T ss_pred HHHH-cCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCc
Confidence 9977 89888887765443332 22 3799999999988 5788899999999999998654333444444344444
No 100
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.74 E-value=5.6e-17 Score=121.37 Aligned_cols=137 Identities=26% Similarity=0.413 Sum_probs=117.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.+|.+.++++|+++++++++.+++.+.++|+++.....+.++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 64 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 143 (288)
T smart00829 64 RTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRD 143 (288)
T ss_pred EccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778999999999999999999999999999877677789999999996 99999999999999999999999999999
Q ss_pred HHHHHcCC--CEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGA--DSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~--~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|. +.++++.+.+..+++. +++|.++|++|+. .....+++++++|+++.+|...
T Consensus 144 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 208 (288)
T smart00829 144 FLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRD 208 (288)
T ss_pred HHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcC
Confidence 9977 997 6777776544433322 2799999999975 6889999999999999998653
No 101
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.74 E-value=7e-17 Score=124.73 Aligned_cols=151 Identities=19% Similarity=0.209 Sum_probs=115.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
+++++.++++|++++.++ ++++..+.+|++++. ...+++++++|.|+|++|.+++++++.+|++ |+++.+++++.+
T Consensus 124 ~~~~~~~~~lp~~~~~~~-a~~~~~~~~a~~~~~--~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~ 200 (340)
T TIGR00692 124 VVPAQNIWKNPKSIPPEY-ATIQEPLGNAVHTVL--AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLE 200 (340)
T ss_pred EeehHHcEECcCCCChHh-hhhcchHHHHHHHHH--ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 456778999999999855 467788889988863 3347899999987799999999999999996 888877787888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCcc-ccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAF-PLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~ 154 (173)
.+++ +|.+.++++...+..+++ . +++|+++||+|....+...+++|+++|+++.+|.......++.. .++.+.
T Consensus 201 ~~~~-~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 279 (340)
T TIGR00692 201 LAKK-MGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKG 279 (340)
T ss_pred HHHH-hCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcc
Confidence 7777 998888877654433332 2 37999999999766788999999999999999975433333333 344444
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 280 ~~ 281 (340)
T TIGR00692 280 LT 281 (340)
T ss_pred eE
Confidence 43
No 102
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.74 E-value=5.1e-17 Score=123.34 Aligned_cols=137 Identities=30% Similarity=0.371 Sum_probs=118.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.++|+++.....+.++++++|+|+ |++|.+++++++.+|++|+++++++++.+
T Consensus 96 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 175 (320)
T cd05286 96 VVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAE 175 (320)
T ss_pred EecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45677899999999999999999999999999887777789999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+.... .. .++|++++|+++. .....+++++++|+++.+|...
T Consensus 176 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 176 LARA-AGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HHHH-CCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcEEEEEecCC
Confidence 9977 99888887765443332 22 2799999999986 6889999999999999998654
No 103
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.74 E-value=6.5e-17 Score=124.36 Aligned_cols=136 Identities=23% Similarity=0.229 Sum_probs=112.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++.+++.+ ..+.++++++ ....++++++++|+|+|.+|.+++++++..|++ |+++.+++++.+
T Consensus 121 ~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 198 (334)
T cd08234 121 VVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLE 198 (334)
T ss_pred EecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 4677889999999999988755 7788999988 555668999999998899999999999999997 888999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHH--Hh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ--AA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~--~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.++++...+... .. .+++|++|||+|........+++++++|+++.+|...
T Consensus 199 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~ 260 (334)
T cd08234 199 LAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYA 260 (334)
T ss_pred HHHH-hCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCC
Confidence 8877 8987787776543221 11 2379999999987657889999999999999998654
No 104
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.74 E-value=8e-17 Score=124.59 Aligned_cols=135 Identities=31% Similarity=0.392 Sum_probs=114.7
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCC----CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDK----PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~----~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.+|.+.++++|++++.++++.+++.+.|||+++.+...+. +|++++|+|+ |++|.+++++++..|++|+++.++
T Consensus 118 ~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~- 196 (350)
T cd08248 118 VVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST- 196 (350)
T ss_pred EecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-
Confidence 4677889999999999999999999999999997776654 4999999997 999999999999999999888765
Q ss_pred chHHHHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 77 SKKSEAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 77 ~~~~~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
++.+.+++ +|.+.+++..+.+..+.+. +++|++||++|+. ....++++++++|+++.+|..
T Consensus 197 ~~~~~~~~-~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~ 259 (350)
T cd08248 197 DAIPLVKS-LGADDVIDYNNEDFEEELTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSP 259 (350)
T ss_pred chHHHHHH-hCCceEEECCChhHHHHHHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCC
Confidence 56666666 8988888876654444433 4799999999988 689999999999999999854
No 105
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.74 E-value=6.1e-17 Score=124.34 Aligned_cols=131 Identities=34% Similarity=0.446 Sum_probs=114.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE 81 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~ 81 (173)
.++.+.++++|+++++.+++.+++.+.|||+++ ....++++++++|+|+|++|++++++++..|++|+++++++++++.
T Consensus 128 ~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~ 206 (329)
T cd08298 128 VADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL 206 (329)
T ss_pred EecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHH
Confidence 467788999999999999999999999999999 6666799999999988999999999999999999999999999999
Q ss_pred HHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 82 AVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 82 ~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+++ +|++.+++.... ..+++|+++++.+....+..++++++++|+++.+|..
T Consensus 207 ~~~-~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~ 258 (329)
T cd08298 207 ARE-LGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIH 258 (329)
T ss_pred HHH-hCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCC
Confidence 977 998877765432 1247999999877666789999999999999998853
No 106
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.73 E-value=8.8e-17 Score=125.86 Aligned_cols=136 Identities=23% Similarity=0.218 Sum_probs=111.0
Q ss_pred ccccc--eeEECCCCCCcc---cccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 030694 2 VADEH--FVVRIPEGAPLD---ATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (173)
Q Consensus 2 ~~~~~--~~~~~p~~~~~~---~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~ 75 (173)
++|.+ +++++|++++++ +++++++.+.|||+++ ....+.++++|+|.|+|++|++++|+++..|+ +|++++++
T Consensus 132 ~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~ 210 (375)
T cd08282 132 RVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHV 210 (375)
T ss_pred EeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34544 899999999998 5688999999999999 45566899999998889999999999999998 79999899
Q ss_pred cchHHHHHHHcCCCEEeeCCChHHHHH---hc-CCccEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeCCCC
Q 030694 76 PSKKSEAVERLGADSFLVSRDQDEMQA---AM-GTMDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 76 ~~~~~~~~~~~g~~~v~~~~~~~~~~~---~~-~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|.+.+++ +|+. .+++.+.+.... .. +++|+++||+|... .+..++++++++|+++.+|...
T Consensus 211 ~~~~~~~~~-~g~~-~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~ 288 (375)
T cd08282 211 PERLDLAES-IGAI-PIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYV 288 (375)
T ss_pred HHHHHHHHH-cCCe-EeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccC
Confidence 999998888 9984 456655433332 22 37999999999873 3789999999999999887643
No 107
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.73 E-value=7.9e-17 Score=120.92 Aligned_cols=134 Identities=27% Similarity=0.404 Sum_probs=111.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
.+|.++++++|+++++++++.+ +.+.|||+++.. ..++++++++|+|+|.+|.+++++++.+|++ |+++++++++.+
T Consensus 59 ~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~~-~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~ 136 (277)
T cd08255 59 VVPANLLVPLPDGLPPERAALT-ALAATALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE 136 (277)
T ss_pred EcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHH
Confidence 4677899999999999888888 889999999864 5668999999998899999999999999998 999999999999
Q ss_pred HHHHHcC-CCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLG-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +| .+.+++..... ....++|++||+++........+++++++|+++.+|..+.
T Consensus 137 ~~~~-~g~~~~~~~~~~~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~ 194 (277)
T cd08255 137 LAEA-LGPADPVAADTADE---IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGL 194 (277)
T ss_pred HHHH-cCCCccccccchhh---hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCC
Confidence 7787 88 55555432211 0123799999999976678899999999999999986544
No 108
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.73 E-value=9.5e-17 Score=123.20 Aligned_cols=135 Identities=27% Similarity=0.321 Sum_probs=114.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+. +.+++.+++++.|||+++.....+.++++++|+|+ |.+|.+++++++..|++|+++.+++++.+
T Consensus 101 ~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (329)
T cd08250 101 VVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE 178 (329)
T ss_pred EechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence 4677889999987 35678899999999999988777799999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+. . .+++|++||++|+. .+...+++++++|+++.+|...
T Consensus 179 ~~~~-~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 240 (329)
T cd08250 179 FLKS-LGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIGFIS 240 (329)
T ss_pred HHHH-cCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhccCCeEEEEeccc
Confidence 9977 99888887665433222 2 23799999999986 6889999999999999998654
No 109
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.73 E-value=1.2e-16 Score=122.51 Aligned_cols=135 Identities=29% Similarity=0.387 Sum_probs=115.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
+++.+.++++|+++++++++.+++++.|||+++.. ..+.++++++|+|+ |++|++++++++..|++|+++.+++++.+
T Consensus 123 ~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~ 201 (332)
T cd08259 123 KVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLK 201 (332)
T ss_pred EechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence 46778899999999999999999999999999987 66689999999998 99999999999999999999999988888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.+ +|.+.+++..+ ..+.+. .++|++++++|.. ....++++++++|+++.+|....
T Consensus 202 ~~~~-~~~~~~~~~~~--~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~ 260 (332)
T cd08259 202 ILKE-LGADYVIDGSK--FSEDVKKLGGADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTP 260 (332)
T ss_pred HHHH-cCCcEEEecHH--HHHHHHhccCCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCC
Confidence 8876 88877776543 222222 2799999999988 48899999999999999986543
No 110
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.72 E-value=1.2e-16 Score=119.58 Aligned_cols=137 Identities=26% Similarity=0.361 Sum_probs=118.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.++|+++.....++++++++|+|+ |.+|++++++++.+|++++++.+++++.+
T Consensus 68 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 147 (293)
T cd05195 68 RVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKRE 147 (293)
T ss_pred EechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 46778899999999999999999999999999877777799999999986 99999999999999999999999999999
Q ss_pred HHHHHcC--CCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLG--ADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g--~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ ++ .+.++++...+..+++ . .++|++++++|+. .++..+++++++|+++.+|...
T Consensus 148 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 212 (293)
T cd05195 148 FLRE-LGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRD 212 (293)
T ss_pred HHHH-hCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeeccc
Confidence 9888 66 6777777654433332 2 2799999999998 7899999999999999998654
No 111
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.72 E-value=2e-16 Score=123.38 Aligned_cols=152 Identities=22% Similarity=0.296 Sum_probs=114.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~ 80 (173)
++|.+.++++|+++++++++. .....++++++ ....+.++++++|+|+|++|.+++++++..|++ +++++++++|.+
T Consensus 143 ~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~ 220 (364)
T PLN02702 143 VHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLS 220 (364)
T ss_pred EcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHH
Confidence 466778999999999888764 22344577777 445568999999998899999999999999995 777778888888
Q ss_pred HHHHHcCCCEEeeCC--ChHH---HHHh----cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 81 EAVERLGADSFLVSR--DQDE---MQAA----MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~--~~~~---~~~~----~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+++ +|++.++++. ..+. +.++ .+++|++||++|....+..++++++++|+++.+|...+...++...+.
T Consensus 221 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 299 (364)
T PLN02702 221 VAKQ-LGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAA 299 (364)
T ss_pred HHHH-hCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHH
Confidence 8877 9988776643 2222 2222 237999999999765789999999999999999965443344444555
Q ss_pred cCccc
Q 030694 152 TGEEE 156 (173)
Q Consensus 152 ~~~~~ 156 (173)
.++..
T Consensus 300 ~~~~~ 304 (364)
T PLN02702 300 AREVD 304 (364)
T ss_pred hCccE
Confidence 55554
No 112
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.72 E-value=1.4e-16 Score=120.99 Aligned_cols=153 Identities=30% Similarity=0.342 Sum_probs=124.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|+++++++++.++..+.++|+++.....+.++++++|+|+ |++|++++++++..|++|+++.+++++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~ 178 (323)
T cd05276 99 VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLE 178 (323)
T ss_pred EcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45677899999999999999999999999999887777789999999998 89999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.+++....+....+ . +++|++++++|+.. ....+++++++|+++.+|..+. ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~ 256 (323)
T cd05276 179 ACRA-LGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKR 256 (323)
T ss_pred HHHH-cCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhC
Confidence 8877 898888877654433332 1 37999999999884 7889999999999999986542 2344444444454
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 257 ~~ 258 (323)
T cd05276 257 LT 258 (323)
T ss_pred Ce
Confidence 43
No 113
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.72 E-value=2e-16 Score=122.30 Aligned_cols=136 Identities=21% Similarity=0.289 Sum_probs=109.8
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~ 80 (173)
++|.+.++++|++++.+. ++++..+.++++++.. ...++++|+|.|+|.+|.+++++++..|+ +|++++++++|.+
T Consensus 126 ~v~~~~~~~lP~~~~~~~-a~~~~~~~~a~~~~~~--~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~ 202 (341)
T cd05281 126 VVPEENLWKNDKDIPPEI-ASIQEPLGNAVHTVLA--GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLE 202 (341)
T ss_pred EechHHcEECcCCCCHHH-hhhhhHHHHHHHHHHh--cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHH
Confidence 567789999999998854 4677778888887652 33789999998889999999999999999 7988888888888
Q ss_pred HHHHHcCCCEEeeCCChHH--HHHhc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDE--MQAAM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~--~~~~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.++++++...+. +.+.. +++|++|||+|.......++++|+++|+++.+|....
T Consensus 203 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 266 (341)
T cd05281 203 LAKK-MGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG 266 (341)
T ss_pred HHHH-hCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC
Confidence 8787 99888887654433 22222 3799999999987678899999999999999986544
No 114
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.72 E-value=1.9e-16 Score=120.63 Aligned_cols=153 Identities=31% Similarity=0.329 Sum_probs=124.6
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|++++..+++.++..+.|+|+++.....+.++++++|+|+ |++|.+++++++..|++|+++.+++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
T TIGR02824 99 AVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCA 178 (325)
T ss_pred EecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777899999999997 99999999999999999999999999888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHhc-----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQAAM-----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~~-----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+++ +|.+.+++....+....+. +++|++++++|.. .....+++++++|+++.+|.... ...++...++.++
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 256 (325)
T TIGR02824 179 ACEA-LGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKR 256 (325)
T ss_pred HHHH-cCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcC
Confidence 8866 8987777766544333322 3699999999987 68899999999999999986442 2245555554555
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 257 ~~ 258 (325)
T TIGR02824 257 LT 258 (325)
T ss_pred CE
Confidence 54
No 115
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.72 E-value=2.8e-16 Score=120.28 Aligned_cols=154 Identities=21% Similarity=0.282 Sum_probs=120.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHH---hhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLR---FYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS 77 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~ 77 (173)
+++.+.++++|++++.++++.+++.+.+|+.++. .....+++++++|+|+ |++|.+++++++.+|++|+++..+++
T Consensus 103 ~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~ 182 (324)
T cd08288 103 RVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPE 182 (324)
T ss_pred EEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4677889999999999999999999999987764 3344236789999998 99999999999999999999999999
Q ss_pred hHHHHHHHcCCCEEeeCCChHH-HHHhc-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 78 KKSEAVERLGADSFLVSRDQDE-MQAAM-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 78 ~~~~~~~~~g~~~v~~~~~~~~-~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
|.+.+++ +|+++++++.+.+. +.... +++|.++|++++. .+...+..++.+|+++.+|...+ +..++...++.++
T Consensus 183 ~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~ 260 (324)
T cd08288 183 EADYLRS-LGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRG 260 (324)
T ss_pred HHHHHHh-cCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccc
Confidence 9999977 99999988765332 22222 3689999999985 57788899999999999986532 2234444444555
Q ss_pred ccc
Q 030694 155 EED 157 (173)
Q Consensus 155 ~~~ 157 (173)
.++
T Consensus 261 ~~~ 263 (324)
T cd08288 261 VTL 263 (324)
T ss_pred cEE
Confidence 553
No 116
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.72 E-value=1.4e-16 Score=120.36 Aligned_cols=136 Identities=21% Similarity=0.267 Sum_probs=116.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.++..+.+||+++. ...++++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 81 ~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 159 (303)
T cd08251 81 TVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLE 159 (303)
T ss_pred EccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 4677889999999999999999999999999985 566799999999987 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+.... .. .++|+++|++++. .....+++++++|+++.+|..+
T Consensus 160 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~ 222 (303)
T cd08251 160 YLKQ-LGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTA 222 (303)
T ss_pred HHHH-cCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccC
Confidence 9977 99988888765443332 22 3799999999876 6889999999999999987543
No 117
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.70 E-value=6.2e-16 Score=118.69 Aligned_cols=138 Identities=26% Similarity=0.325 Sum_probs=117.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++++.+|++++.....+.++++++|+|+ +.+|++++++++..|++|+++++++++.+
T Consensus 126 ~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~ 205 (342)
T cd08266 126 AVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLE 205 (342)
T ss_pred EechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 45677899999999999999999999999999877777789999999998 79999999999999999999999999998
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh----c-CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA----M-GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~----~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+.. ++.+.+++..+.+..+.+ . +++|+++++.|.. .+...+++++++|+++.+|....
T Consensus 206 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~ 269 (342)
T cd08266 206 RAKE-LGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTG 269 (342)
T ss_pred HHHH-cCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCC
Confidence 8877 887777776654433332 1 3799999999987 58899999999999999986543
No 118
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.70 E-value=1.5e-16 Score=117.18 Aligned_cols=136 Identities=19% Similarity=0.192 Sum_probs=115.2
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+..++.|||-.+...+..++|++++|-|| |.+|.++-|+++.+||+|+..+.+++|.+.++..+|.+..+||.++..
T Consensus 132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~ 211 (343)
T KOG1196|consen 132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESD 211 (343)
T ss_pred hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccC
Confidence 3788899999999999988899999999998 999999999999999999999999999999999899999999998743
Q ss_pred HHH-hc----CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC---Cc---ccCccccccCcccc
Q 030694 100 MQA-AM----GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK---PL---ELPAFPLLTGEEED 157 (173)
Q Consensus 100 ~~~-~~----~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~---~~~~~~~~~~~~~~ 157 (173)
+.+ +. .++|+.||.+|+. .++..+..|+..||++.||..+. +. --+...++.|++.+
T Consensus 212 ~~~aL~r~~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~i 279 (343)
T KOG1196|consen 212 LSAALKRCFPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRI 279 (343)
T ss_pred HHHHHHHhCCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEe
Confidence 333 32 3999999999999 69999999999999999997553 11 12235666666654
No 119
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.69 E-value=5.8e-16 Score=117.75 Aligned_cols=138 Identities=30% Similarity=0.378 Sum_probs=117.2
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++..+++.+...+.+|++++.....+.++++++|+|+ |.+|.+++++++..|++|+++++++++.+
T Consensus 99 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (323)
T cd08241 99 VVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLA 178 (323)
T ss_pred EcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHH
Confidence 35667889999999998888899999999999886677789999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++ +|.+.+++....+..+. .. .++|.+++++|+. ....++++++++|+++.+|....
T Consensus 179 ~~~~-~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~ 242 (323)
T cd08241 179 LARA-LGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASG 242 (323)
T ss_pred HHHH-cCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCC
Confidence 9987 89877777665433322 22 3799999999986 68889999999999999986543
No 120
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.69 E-value=7.5e-16 Score=117.49 Aligned_cols=153 Identities=24% Similarity=0.355 Sum_probs=123.4
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.++|+++.....+.++++++|+|+ |++|..++++++..|++++++++++++.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~ 183 (328)
T cd08268 104 LVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD 183 (328)
T ss_pred EechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 45778899999999999999999999999999987777789999999998 99999999999999999999999999999
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCC-CcccCccccccCc
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPAFPLLTGE 154 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~ 154 (173)
.+.+ +|.+.+++....+.... .. .++|++++++|+. ....++++++++|+++.+|.... ...++....+.++
T Consensus 184 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~ 261 (328)
T cd08268 184 ALLA-LGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKS 261 (328)
T ss_pred HHHH-cCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcC
Confidence 8876 89877877665433222 22 2799999999996 68899999999999999985432 2233333334444
Q ss_pred cc
Q 030694 155 EE 156 (173)
Q Consensus 155 ~~ 156 (173)
..
T Consensus 262 ~~ 263 (328)
T cd08268 262 LT 263 (328)
T ss_pred CE
Confidence 43
No 121
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.68 E-value=9.8e-16 Score=116.84 Aligned_cols=135 Identities=29% Similarity=0.366 Sum_probs=115.5
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.++++++|++++.++++.+++.+.+||+++.+...++++++++|+|+ |.+|++++++++..|++|+.+.++ ++.+
T Consensus 104 ~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~ 182 (326)
T cd08272 104 VVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAA 182 (326)
T ss_pred EecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHH
Confidence 45677889999999999999999999999999877777799999999997 999999999999999999999988 8888
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh---c--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA---M--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~---~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++.... ..+.+ . .++|.++|++++. .....+++++++|+++.+|...
T Consensus 183 ~~~~-~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~ 244 (326)
T cd08272 183 FARS-LGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA 244 (326)
T ss_pred HHHH-cCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC
Confidence 8877 998888776544 33322 2 2799999999987 5888999999999999998553
No 122
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.67 E-value=2e-15 Score=117.14 Aligned_cols=129 Identities=26% Similarity=0.306 Sum_probs=105.9
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhC-CCCCCCEEEEEcC-ChHHHHHHHHHHHC-CC-eEEEEeCCcchHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYG-LDKPGMHVGVVGL-GGLGHVAVKFAKAM-GV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~G~-g~~G~~a~~~~~~~-g~-~v~~~~~~~~~~~~~ 82 (173)
.++++|+++++++++.+++++.|||+++.... .+++|++++|+|+ |.+|.+++++++.. |. +++.+. ++++.+.+
T Consensus 115 ~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~ 193 (352)
T cd08247 115 SITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN 193 (352)
T ss_pred eeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH
Confidence 78999999999999999999999999998876 6789999999998 89999999999987 44 566665 45556677
Q ss_pred HHHcCCCEEeeCCChH---HH----HHhc--CCccEEEEcCCCccchHHHHHhhh---cCCEEEEeC
Q 030694 83 VERLGADSFLVSRDQD---EM----QAAM--GTMDGIIDTVSAVHPLMPLIGLLK---SQGKLVLLG 137 (173)
Q Consensus 83 ~~~~g~~~v~~~~~~~---~~----~~~~--~~~d~vid~~g~~~~~~~~~~~l~---~~G~~v~~g 137 (173)
++ +|.+.++++.+.+ .. +... +++|++|||+|+......++++++ ++|+++.++
T Consensus 194 ~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 194 KK-LGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred HH-hCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEe
Confidence 66 9988888876533 22 2222 489999999998556788999999 999999874
No 123
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.66 E-value=2.3e-15 Score=115.52 Aligned_cols=135 Identities=24% Similarity=0.321 Sum_probs=113.3
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++++.+||+++.....+.++++++|+|+ |.+|.+++++++..|++|++++. +++.+
T Consensus 99 ~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~ 177 (331)
T cd08273 99 NLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHA 177 (331)
T ss_pred EechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHH
Confidence 45677899999999999999999999999999988777799999999998 99999999999999999999987 78888
Q ss_pred HHHHHcCCCEEeeCCChHHHH-Hh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQ-AA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~-~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|... ++....+... .. .+++|++++|+|+.. ...++++++++|+++.+|...
T Consensus 178 ~~~~-~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~ 236 (331)
T cd08273 178 ALRE-LGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGES-YEESYAALAPGGTLVCYGGNS 236 (331)
T ss_pred HHHH-cCCeE-EcCCCcchhhhhccCCCceEEEECCchHH-HHHHHHHhcCCCEEEEEccCC
Confidence 8877 88654 3443332222 12 247999999999985 889999999999999998654
No 124
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.65 E-value=3.9e-15 Score=113.66 Aligned_cols=135 Identities=29% Similarity=0.408 Sum_probs=114.0
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++..+++.+++.+.+|++++.....+.++++++|+|+ |.+|++++++++..|++|+++. ++++.+
T Consensus 101 ~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~ 179 (325)
T cd08271 101 VVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFE 179 (325)
T ss_pred EeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHH
Confidence 45677899999999999999999999999999988877789999999998 8999999999999999988877 667778
Q ss_pred HHHHHcCCCEEeeCCChHHHHH---hc--CCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQA---AM--GTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~---~~--~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.+ +|.+.+++....+...+ .. .++|.+++++++. .....+++++++|+++.+|..
T Consensus 180 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~ 241 (325)
T cd08271 180 YVKS-LGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGR 241 (325)
T ss_pred HHHH-cCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCC
Confidence 8866 89888887665433322 22 2799999999987 467789999999999998744
No 125
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.65 E-value=2.8e-15 Score=114.20 Aligned_cols=137 Identities=33% Similarity=0.426 Sum_probs=110.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|++++.++++.+++.+.+||+++.....++++++++|+|+ |++|.+++++++..|++|++++++ ++.+
T Consensus 103 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~ 181 (319)
T cd08267 103 VAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAE 181 (319)
T ss_pred EechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHH
Confidence 45677899999999999999999999999999988887799999999998 999999999999999999998875 7788
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh--cCCccEEEEcCCCc-cchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA--MGTMDGIIDTVSAV-HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~--~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..... .+++|++++|+|+. ......+..++++|+++.+|...
T Consensus 182 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 182 LVRS-LGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred HHHH-cCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 8866 998878776544332112 23799999999953 12334444599999999998654
No 126
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.65 E-value=3.3e-15 Score=113.03 Aligned_cols=136 Identities=31% Similarity=0.420 Sum_probs=114.9
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS 80 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~ 80 (173)
.++.+.++++|+++++++++.+++.+.++++++.....+.++++++|+|+ |.+|++++++++..|++|+++..++ +.+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~ 182 (309)
T cd05289 104 VVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NAD 182 (309)
T ss_pred EecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHH
Confidence 35667888999999999999999999999999988876789999999998 9999999999999999999998877 788
Q ss_pred HHHHHcCCCEEeeCCChHHHHHh-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 81 EAVERLGADSFLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 81 ~~~~~~g~~~v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+++ +|.+.+++....+..+.. .+++|++++++|+. ....++++++++|+++.+|...
T Consensus 183 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~ 241 (309)
T cd05289 183 FLRS-LGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPP 241 (309)
T ss_pred HHHH-cCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCC
Confidence 8866 898778776654432211 23799999999998 6889999999999999998644
No 127
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.57 E-value=4.4e-14 Score=108.37 Aligned_cols=136 Identities=27% Similarity=0.346 Sum_probs=109.1
Q ss_pred ccccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC-CCeEEEEeCCcchH
Q 030694 2 VADEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM-GVKVTVISTSPSKK 79 (173)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~-g~~v~~~~~~~~~~ 79 (173)
.++.+.++++|+++++++++.+++.+.+||+++.....++++++|+|+|+ |.+|.+++++++.. +..++.. ..+++.
T Consensus 98 ~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~ 176 (337)
T cd08275 98 NVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKH 176 (337)
T ss_pred EecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHH
Confidence 35667899999999999999999999999999887777799999999998 99999999999998 3333222 234577
Q ss_pred HHHHHHcCCCEEeeCCChHHHHH---h-cCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 80 SEAVERLGADSFLVSRDQDEMQA---A-MGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 80 ~~~~~~~g~~~v~~~~~~~~~~~---~-~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.++. +|.+.+++....+.... . .+++|+++||+|+. .....+++++++|+++.+|...
T Consensus 177 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~v~~g~~~ 239 (337)
T cd08275 177 EALKE-NGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRLVVYGAAN 239 (337)
T ss_pred HHHHH-cCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEEEEEeecC
Confidence 77766 89888887765433222 2 24799999999987 5889999999999999998543
No 128
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.50 E-value=6.9e-13 Score=106.57 Aligned_cols=115 Identities=23% Similarity=0.268 Sum_probs=90.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCCh-------------HHH------
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQ-------------DEM------ 100 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~-------------~~~------ 100 (173)
.++++|+|+|+|++|+++++.++.+|++|++++++++|++.+++ +|++.+ +|..+. +..
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 57999999999999999999999999999999999999999999 998854 554321 111
Q ss_pred -HHhcCCccEEEEcCCCcc-----c-hHHHHHhhhcCCEEEEeCCCC-CC--cccCcccccc-Cccc
Q 030694 101 -QAAMGTMDGIIDTVSAVH-----P-LMPLIGLLKSQGKLVLLGAPE-KP--LELPAFPLLT-GEEE 156 (173)
Q Consensus 101 -~~~~~~~d~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~-~~--~~~~~~~~~~-~~~~ 156 (173)
.+..+++|++|+|++.+. . .+++++.+++||+++++|... +. .+.+...++. ++++
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVt 308 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVT 308 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEE
Confidence 111247999999999742 4 489999999999999999753 43 4555556665 6765
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.45 E-value=1.8e-12 Score=101.82 Aligned_cols=119 Identities=17% Similarity=0.170 Sum_probs=95.8
Q ss_pred HHHHHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCc
Q 030694 29 TVYSPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 29 ta~~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~ 107 (173)
+.+.++.+. ....+|++|+|+|+|++|+.+++.++..|++|+++++++.|++.++. +|.+.+ + ..+...+.
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-~G~~~~-~------~~e~v~~a 258 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-EGYEVM-T------MEEAVKEG 258 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-cCCEEc-c------HHHHHcCC
Confidence 345665554 33468999999999999999999999999999999999999999988 897533 2 12334578
Q ss_pred cEEEEcCCCccchHHH-HHhhhcCCEEEEeCCCCCCcccCccccccCcccc
Q 030694 108 DGIIDTVSAVHPLMPL-IGLLKSQGKLVLLGAPEKPLELPAFPLLTGEEED 157 (173)
Q Consensus 108 d~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 157 (173)
|++|+|+|.+..+... +..++++|+++.+|.. ...++...+..++...
T Consensus 259 DVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i 307 (413)
T cd00401 259 DIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEV 307 (413)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEE
Confidence 9999999998777765 9999999999999965 3567887787777653
No 130
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=99.20 E-value=7.1e-10 Score=87.57 Aligned_cols=111 Identities=16% Similarity=0.201 Sum_probs=86.9
Q ss_pred HHHHHHHHhhCCC-CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCC
Q 030694 28 ITVYSPLRFYGLD-KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 28 ~ta~~~l~~~~~~-~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~ 106 (173)
...|.++.+...+ ..|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|.. +.+ +.+...+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~G~~-v~~------l~eal~~ 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-DGFR-VMT------MEEAAEL 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-cCCE-ecC------HHHHHhC
Confidence 4457777766333 48999999999999999999999999999999999888766666 5654 221 2334458
Q ss_pred ccEEEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 107 MDGIIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 107 ~d~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
+|++|+++|....++ ..+..+++|+.++..|....+..++
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~Eid~~ 308 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDNEIDVA 308 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCCccChH
Confidence 999999999887676 6788999999999999877554443
No 131
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=99.16 E-value=2.5e-09 Score=81.28 Aligned_cols=118 Identities=19% Similarity=0.297 Sum_probs=87.5
Q ss_pred hhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 23 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
.+.+..+...++.....-..+++++|+|.|.+|+.+++.++.+|++|++++++.++.+.+.. +|.+.+ . .+.+.+
T Consensus 132 ~~~aegav~~a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-~G~~~~-~---~~~l~~ 206 (296)
T PRK08306 132 IPTAEGAIMMAIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARITE-MGLSPF-H---LSELAE 206 (296)
T ss_pred HhHHHHHHHHHHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCeee-c---HHHHHH
Confidence 33333333334444443347899999999999999999999999999999999888888777 886533 2 233444
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCCCCccc
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPEKPLEL 145 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 145 (173)
...++|++|+|++........+..+++++.++.++..++...+
T Consensus 207 ~l~~aDiVI~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~ 249 (296)
T PRK08306 207 EVGKIDIIFNTIPALVLTKEVLSKMPPEALIIDLASKPGGTDF 249 (296)
T ss_pred HhCCCCEEEECCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe
Confidence 5568999999998764445777889999999999977765443
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=99.08 E-value=2.3e-09 Score=86.34 Aligned_cols=100 Identities=25% Similarity=0.314 Sum_probs=78.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCC-------------hHH-------
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRD-------------QDE------- 99 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~-------------~~~------- 99 (173)
.++++++|+|+|.+|+.+++.++.+|++|+++++++++++.+++ +|.+.+ ++..+ .+.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999998 997653 22211 111
Q ss_pred HHHhcCCccEEEEcC---CCcc---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 100 MQAAMGTMDGIIDTV---SAVH---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 100 ~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..+...++|++|+|+ |.+. ..+..++.|++|+.+++++...|
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCC
Confidence 222234899999999 6543 46688999999999999986554
No 133
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=99.03 E-value=5.5e-09 Score=82.16 Aligned_cols=104 Identities=21% Similarity=0.171 Sum_probs=81.4
Q ss_pred HHHHHHhhC-CCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCcc
Q 030694 30 VYSPLRFYG-LDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 30 a~~~l~~~~-~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d 108 (173)
.+.++.+.. ....|++|+|+|.|.+|+.+++.++..|++|+++++++.+...+.. .|.. +.+ +++...+.|
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~-~G~~-v~~------leeal~~aD 252 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEAAM-DGFR-VMT------MEEAAKIGD 252 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHh-cCCE-eCC------HHHHHhcCC
Confidence 355555543 3368999999999999999999999999999999998887766666 6753 321 122345789
Q ss_pred EEEEcCCCccchHH-HHHhhhcCCEEEEeCCCCC
Q 030694 109 GIIDTVSAVHPLMP-LIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 109 ~vid~~g~~~~~~~-~~~~l~~~G~~v~~g~~~~ 141 (173)
++|+++|.+..++. .+..+++++.++.+|..+.
T Consensus 253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~~~ 286 (406)
T TIGR00936 253 IFITATGNKDVIRGEHFENMKDGAIVANIGHFDV 286 (406)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCcEEEEECCCCc
Confidence 99999999877764 8889999999999987643
No 134
>PLN02494 adenosylhomocysteinase
Probab=98.98 E-value=1.1e-08 Score=81.44 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=81.8
Q ss_pred HHHHHhhCC-CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRFYGL-DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~~~~-~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++.+... ...|++++|+|.|.+|+.+++.++..|++|+++++++.+...+.. .|...+ + +.+.....|+
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~-~G~~vv-~------leEal~~ADV 312 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQALM-EGYQVL-T------LEDVVSEADI 312 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHh-cCCeec-c------HHHHHhhCCE
Confidence 555555533 367999999999999999999999999999999999887666666 665422 1 2334457899
Q ss_pred EEEcCCCccch-HHHHHhhhcCCEEEEeCCCCC
Q 030694 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++++.|....+ ...+..|++++.++.+|....
T Consensus 313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~~ 345 (477)
T PLN02494 313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFDN 345 (477)
T ss_pred EEECCCCccchHHHHHhcCCCCCEEEEcCCCCC
Confidence 99999988654 789999999999999997543
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.96 E-value=1.7e-08 Score=79.03 Aligned_cols=100 Identities=19% Similarity=0.234 Sum_probs=77.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC-----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA----- 116 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~----- 116 (173)
++.+++|+|+|.+|+.+++.++.+|++|+++++++++++.+...++........+.+.+.+...++|++|+|++.
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~ 245 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA 245 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence 346699999999999999999999999999999998888887656653223334445555566789999999842
Q ss_pred cc-chHHHHHhhhcCCEEEEeCCCCC
Q 030694 117 VH-PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 117 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+. .....+..+++++.++.++...+
T Consensus 246 p~lit~~~l~~mk~g~vIvDva~d~G 271 (370)
T TIGR00518 246 PKLVSNSLVAQMKPGAVIVDVAIDQG 271 (370)
T ss_pred CcCcCHHHHhcCCCCCEEEEEecCCC
Confidence 21 13678888999999999986554
No 136
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.90 E-value=1e-07 Score=72.21 Aligned_cols=100 Identities=20% Similarity=0.310 Sum_probs=77.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.+++++|+|.|.+|..+++.++..|++|++.++++++.+.+.+ .|...+ . .+.+.+...+.|+++++++.....
T Consensus 149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-~g~~~~-~---~~~l~~~l~~aDiVint~P~~ii~ 223 (287)
T TIGR02853 149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARITE-MGLIPF-P---LNKLEEKVAEIDIVINTIPALVLT 223 (287)
T ss_pred CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeee-c---HHHHHHHhccCCEEEECCChHHhC
Confidence 46899999999999999999999999999999999887777665 664322 2 233444556899999999866323
Q ss_pred HHHHHhhhcCCEEEEeCCCCCCccc
Q 030694 121 MPLIGLLKSQGKLVLLGAPEKPLEL 145 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~~~~~~ 145 (173)
...+..++++..++.++..++...+
T Consensus 224 ~~~l~~~k~~aliIDlas~Pg~tdf 248 (287)
T TIGR02853 224 ADVLSKLPKHAVIIDLASKPGGTDF 248 (287)
T ss_pred HHHHhcCCCCeEEEEeCcCCCCCCH
Confidence 4677889999999999877665444
No 137
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=98.82 E-value=9.5e-08 Score=76.24 Aligned_cols=102 Identities=16% Similarity=0.191 Sum_probs=80.1
Q ss_pred HHHHhh-CCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFY-GLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~-~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++.+. ...-.|++++|+|.|.+|..+++.++..|++|+++++++.+...+.. .|...+ .+.+.....|++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~-~G~~~~-------~leell~~ADIV 313 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQAAM-EGYQVV-------TLEDVVETADIF 313 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHh-cCceec-------cHHHHHhcCCEE
Confidence 444333 34468999999999999999999999999999999988777655555 565422 133455689999
Q ss_pred EEcCCCccchH-HHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~ 141 (173)
+.++|....+. ..+..|++++.++.+|....
T Consensus 314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d~ 345 (476)
T PTZ00075 314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFDN 345 (476)
T ss_pred EECCCcccccCHHHHhccCCCcEEEEcCCCch
Confidence 99999887665 88999999999999997653
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.76 E-value=9.1e-08 Score=73.36 Aligned_cols=108 Identities=20% Similarity=0.256 Sum_probs=73.8
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCC---CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLD---KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (173)
..+++|+.+..+.++... +...++.++...... .++.+|+|+|+|.+|..+++.++..|+ +|++++++.++...+
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 345567777766655322 233334454433321 478999999999999999999988776 899999998887666
Q ss_pred HHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 83 VERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 83 ~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.+|.. +++. +...+....+|++|.|++.+..
T Consensus 219 a~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL---DELLELLNEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence 5558874 3332 2233344579999999999854
No 139
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.74 E-value=2.7e-07 Score=67.21 Aligned_cols=112 Identities=16% Similarity=0.286 Sum_probs=83.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHH----HHh---cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEM----QAA---MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~----~~~---~~~~d~ 109 (173)
+++.++|.|+ +++|.+.++.....|++|+.+.|+.+|++.+..+++. ...+|-.+.+.+ ..+ .+.+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 4578999999 8999999999999999999999999999999998983 234555555432 222 247999
Q ss_pred EEEcCCCcc-------------------------chHHHHHhh--hcCCEEEEeCCCCCCcccCccccccC
Q 030694 110 IIDTVSAVH-------------------------PLMPLIGLL--KSQGKLVLLGAPEKPLELPAFPLLTG 153 (173)
Q Consensus 110 vid~~g~~~-------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~~~ 153 (173)
.+++.|... .....+..| +..|.++.+|+..+..+.+....+-.
T Consensus 85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~A 155 (246)
T COG4221 85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGA 155 (246)
T ss_pred EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchh
Confidence 999999741 123444444 34689999998887766666555443
No 140
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=98.73 E-value=6.9e-07 Score=61.53 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=75.0
Q ss_pred HHHHH-hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLR-FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~-~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+.++. .....-.|++++|+|.|.+|...++.++.+|++|++++.++-+.-++.. -|.. +. .+.+.....|+
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~-dGf~-v~------~~~~a~~~adi 81 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQAAM-DGFE-VM------TLEEALRDADI 81 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH-TT-E-EE-------HHHHTTT-SE
T ss_pred HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHhhh-cCcE-ec------CHHHHHhhCCE
Confidence 44443 3345578999999999999999999999999999999999977666655 4543 32 24455678999
Q ss_pred EEEcCCCccch-HHHHHhhhcCCEEEEeCCCCCCcccC
Q 030694 110 IIDTVSAVHPL-MPLIGLLKSQGKLVLLGAPEKPLELP 146 (173)
Q Consensus 110 vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~ 146 (173)
+|.++|..+.+ .+.+..|+.+..+..+|..+.++.++
T Consensus 82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d~Eid~~ 119 (162)
T PF00670_consen 82 FVTATGNKDVITGEHFRQMKDGAILANAGHFDVEIDVD 119 (162)
T ss_dssp EEE-SSSSSSB-HHHHHHS-TTEEEEESSSSTTSBTHH
T ss_pred EEECCCCccccCHHHHHHhcCCeEEeccCcCceeEeec
Confidence 99999998654 47888999999999999877665544
No 141
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=98.64 E-value=1.6e-07 Score=63.35 Aligned_cols=97 Identities=20% Similarity=0.360 Sum_probs=67.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
-++++++|+|+|++|..++..+...|+ +|+++.|+.+|.+.+.+.++.. ..+...+ ..+....+|++|+|++.+
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~~~DivI~aT~~~ 86 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQEADIVINATPSG 86 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHHTESEEEE-SSTT
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHhhCCeEEEecCCC
Confidence 568999999999999999999999999 5999999999998888877432 2333332 223345899999999987
Q ss_pred cc-h-HHHHHhhhc-CCEEEEeCCCC
Q 030694 118 HP-L-MPLIGLLKS-QGKLVLLGAPE 140 (173)
Q Consensus 118 ~~-~-~~~~~~l~~-~G~~v~~g~~~ 140 (173)
.. + ...+....+ -+.++.++.+.
T Consensus 87 ~~~i~~~~~~~~~~~~~~v~Dla~Pr 112 (135)
T PF01488_consen 87 MPIITEEMLKKASKKLRLVIDLAVPR 112 (135)
T ss_dssp STSSTHHHHTTTCHHCSEEEES-SS-
T ss_pred CcccCHHHHHHHHhhhhceeccccCC
Confidence 32 1 222222222 15788887543
No 142
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=98.55 E-value=6.3e-07 Score=67.36 Aligned_cols=99 Identities=18% Similarity=0.223 Sum_probs=81.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc----
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---- 118 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---- 118 (173)
..+|.|+|+|.+|.-+++++..+|++|++.+.+.+|+..+...++...-.-++....+.+...+.|++|.++-.+.
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP 247 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP 247 (371)
T ss_pred CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence 4568899999999999999999999999999999999999997776534445666777777779999998876541
Q ss_pred --chHHHHHhhhcCCEEEEeCCCCC
Q 030694 119 --PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 119 --~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..++.+..|+||+.++.+..-.+
T Consensus 248 kLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 248 KLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred eehhHHHHHhcCCCcEEEEEEEcCC
Confidence 35688999999999999976554
No 143
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.53 E-value=1.3e-06 Score=65.04 Aligned_cols=111 Identities=13% Similarity=0.225 Sum_probs=79.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----E--eeCCChHHHHHhc-------C
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----F--LVSRDQDEMQAAM-------G 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----v--~~~~~~~~~~~~~-------~ 105 (173)
..+.+++|.|+ +++|...++.+...|++++.+.|+++|++.+.+++...+ + +|.++++....+. .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 56789999999 999999999999999999999999999999888765222 2 3444444333322 2
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhh--cCCEEEEeCCCCCCcccCccccc
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLK--SQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
.+|+.+++.|-.. .....+..|. ..|.++.+++..+..+.+....+
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY 156 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVY 156 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHH
Confidence 7999999999741 1112333342 34889999987765555544443
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=98.51 E-value=1.8e-07 Score=77.23 Aligned_cols=78 Identities=24% Similarity=0.370 Sum_probs=59.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC---------------------cchHHHHHHHcCCCEEeeCCC-h
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS---------------------PSKKSEAVERLGADSFLVSRD-Q 97 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~---------------------~~~~~~~~~~~g~~~v~~~~~-~ 97 (173)
.+.|++|+|+|+|+.|+++++.++..|++|+++++. +.+++.+++ +|.+..++... .
T Consensus 134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~-~Gv~~~~~~~~~~ 212 (564)
T PRK12771 134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILD-LGVEVRLGVRVGE 212 (564)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHH-CCCEEEeCCEECC
Confidence 478999999999999999999999999999999853 235566776 88776665432 1
Q ss_pred H-HHHHhcCCccEEEEcCCCcc
Q 030694 98 D-EMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 98 ~-~~~~~~~~~d~vid~~g~~~ 118 (173)
+ ...+...++|++|+++|...
T Consensus 213 ~~~~~~~~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 213 DITLEQLEGEFDAVFVAIGAQL 234 (564)
T ss_pred cCCHHHHHhhCCEEEEeeCCCC
Confidence 1 12233457999999999763
No 145
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.40 E-value=1.4e-06 Score=65.57 Aligned_cols=100 Identities=22% Similarity=0.278 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCEE-eeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSF-LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v-~~~~~~~~~~~~~~~~d~vid 112 (173)
.++++++||.+|+|. |..+..+++..|. +|++++.+++.++.+++. .+...+ +...+...+....+.+|+|+.
T Consensus 74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~ 152 (272)
T PRK11873 74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS 152 (272)
T ss_pred cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence 458899999999976 8877777877765 699999999998888773 232211 111111111101237999985
Q ss_pred cCC------CccchHHHHHhhhcCCEEEEeCCC
Q 030694 113 TVS------AVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 113 ~~g------~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
... ....+..+++.|+|||+++..+..
T Consensus 153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~ 185 (272)
T PRK11873 153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVV 185 (272)
T ss_pred cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEee
Confidence 532 223578999999999999987643
No 146
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.39 E-value=3.8e-06 Score=60.18 Aligned_cols=99 Identities=27% Similarity=0.276 Sum_probs=70.7
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH---HcCCCEE-eeCCChHHHHHhcCCccEEE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE---RLGADSF-LVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~~~~~d~vi 111 (173)
....++++++||-+|+| +|..++-+++..+ +|+.+++.++=.+.+++ .+|...| +...+...=..-...||.++
T Consensus 66 ~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~~G~~~~aPyD~I~ 143 (209)
T COG2518 66 QLLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGSKGWPEEAPYDRII 143 (209)
T ss_pred HHhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcccCCCCCCCcCEEE
Confidence 44445999999999998 6999999999888 99999998874444433 2675333 22222111001123899999
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
-+.+.+..-..+++.|++||+++..
T Consensus 144 Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 144 VTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred EeeccCCCCHHHHHhcccCCEEEEE
Confidence 8888887667889999999998865
No 147
>PRK08324 short chain dehydrogenase; Validated
Probab=98.38 E-value=4.9e-06 Score=70.30 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=70.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
+|++++|+|+ |++|+.+++.+...|++|+++++++++.+.+.+.++. . ...|-.+.+.+.+. .+++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999997 9999999999999999999999998887776665543 1 12344444333222 34899
Q ss_pred EEEEcCCCcc-------------------------chHHHHHhhhc---CCEEEEeCCCC
Q 030694 109 GIIDTVSAVH-------------------------PLMPLIGLLKS---QGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~-------------------------~~~~~~~~l~~---~G~~v~~g~~~ 140 (173)
++|++.|... .++.+++.+++ +|+++.+++..
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~ 560 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKN 560 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCcc
Confidence 9999999421 13344566655 68999998654
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.34 E-value=7.7e-06 Score=65.38 Aligned_cols=74 Identities=30% Similarity=0.468 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|.+|..+++.++..|+ +|+++.++.++...+.+.+|.. +++. +...+...++|++|+|+|.+.
T Consensus 180 ~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~ 254 (423)
T PRK00045 180 LSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL---DELPEALAEADIVISSTGAPH 254 (423)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence 578999999999999999999999998 8999999988877555547754 3332 223334458999999999874
No 149
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=98.33 E-value=5.8e-06 Score=53.50 Aligned_cols=93 Identities=27% Similarity=0.344 Sum_probs=65.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHc---C--CC-EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERL---G--AD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~---g--~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
|+.+||-+|+| .|..+..+++ ..+++|++++.+++-.+.+++.. + .. .++..+- .......+++|+++...
T Consensus 1 p~~~vLDlGcG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLGCG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-EFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEETTT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-HGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEcCc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-ccCcccCCCCCEEEECC
Confidence 57899999987 4777777777 57889999999999988888866 2 12 2333322 22223345899999877
Q ss_pred -CCc---c------chHHHHHhhhcCCEEEEe
Q 030694 115 -SAV---H------PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 115 -g~~---~------~~~~~~~~l~~~G~~v~~ 136 (173)
... . .++.+.+.|+|||+++..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1 267888999999998763
No 150
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.32 E-value=9.6e-06 Score=63.53 Aligned_cols=98 Identities=24% Similarity=0.274 Sum_probs=75.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC---CCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG---ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g---~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+|+|+|+|.+|+.+++.+...+ .+|++.+|+.++.+.+....+ ....+|-.+.+...++..++|+||++.+....
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~ 81 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD 81 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence 57999999999999999988888 699999999999888877332 23456777777777778888999999998854
Q ss_pred hHHHHHhhhcCCEEEEeCCCCC
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
..-+-.|++.|-.++.......
T Consensus 82 ~~i~ka~i~~gv~yvDts~~~~ 103 (389)
T COG1748 82 LTILKACIKTGVDYVDTSYYEE 103 (389)
T ss_pred HHHHHHHHHhCCCEEEcccCCc
Confidence 4333356666667777765443
No 151
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=98.31 E-value=1.3e-05 Score=63.29 Aligned_cols=115 Identities=26% Similarity=0.220 Sum_probs=80.1
Q ss_pred ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 20 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
...+..+..+.+..+.....++++++||.+|+| .|..+..+++..|++|++++.+++..+.+++...... ++....+
T Consensus 145 ~~~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~-v~~~~~D- 221 (383)
T PRK11705 145 ADTLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLP-VEIRLQD- 221 (383)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCe-EEEEECc-
Confidence 345667777777776666666899999999986 5777788888889999999999999999888442111 1111111
Q ss_pred HHHhcCCccEEEEc-----CCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 100 MQAAMGTMDGIIDT-----VSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 100 ~~~~~~~~d~vid~-----~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..++.+.+|.|+.. +|.. ..+..+.+.|+|||+++...
T Consensus 222 ~~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 222 YRDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12234579998643 3432 34678888999999988754
No 152
>PRK06182 short chain dehydrogenase; Validated
Probab=98.30 E-value=2.2e-05 Score=58.90 Aligned_cols=74 Identities=22% Similarity=0.281 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++++.+.. .+... ..|-.+.+.+.+. .+++|++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999998 999999999999999999999999888776655 44332 3455554433332 248999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9985
No 153
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=98.30 E-value=1.8e-05 Score=64.92 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--------CC------C-EEeeCCChHHHHHh
Q 030694 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--------GA------D-SFLVSRDQDEMQAA 103 (173)
Q Consensus 40 ~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--------g~------~-~v~~~~~~~~~~~~ 103 (173)
.+.|++++|+|+ |.+|..+++.+...|++|++++++.++.+.+.+.+ |. . ...|-.+.+.+.+.
T Consensus 77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence 367899999998 99999999999999999999999988876554322 11 1 12344455556666
Q ss_pred cCCccEEEEcCCCcc---------------chHHHHHhhhc--CCEEEEeCCCC
Q 030694 104 MGTMDGIIDTVSAVH---------------PLMPLIGLLKS--QGKLVLLGAPE 140 (173)
Q Consensus 104 ~~~~d~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~~ 140 (173)
.+++|++|.+.|... ....+++.+.. .+++|.++...
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 679999999998641 01233444433 36899888654
No 154
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.29 E-value=1.3e-05 Score=64.04 Aligned_cols=74 Identities=19% Similarity=0.371 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|.+|..+++.++..|+ +|+++.++.++...+.+.+|.. .+.. +...+...++|++|+|++.+.
T Consensus 178 l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~---~~l~~~l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 178 LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF---EDLEEYLAEADIVISSTGAPH 252 (417)
T ss_pred ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH---HHHHHHHhhCCEEEECCCCCC
Confidence 678999999999999999999999994 8999999988876555547764 2322 223344458999999999774
No 155
>PRK05693 short chain dehydrogenase; Provisional
Probab=98.29 E-value=3.3e-05 Score=57.93 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=54.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHh-------cCCccEEEEcC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAA-------MGTMDGIIDTV 114 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~-------~~~~d~vid~~ 114 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.+ .+...+ .|..+.+.+.+. .+++|++|++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 57899998 999999999999999999999999887777665 454332 465554443332 24799999999
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 81 g~ 82 (274)
T PRK05693 81 GY 82 (274)
T ss_pred CC
Confidence 84
No 156
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.28 E-value=1.8e-05 Score=58.85 Aligned_cols=125 Identities=24% Similarity=0.288 Sum_probs=79.0
Q ss_pred ccceeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHH
Q 030694 4 DEHFVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEA 82 (173)
Q Consensus 4 ~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~ 82 (173)
+...++.+++++++..+. .+.+.. ....+... ..++++|+.+|+|. |..++.+++ .|+ +|++++.++...+.+
T Consensus 85 ~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~~~l~~A 158 (250)
T PRK00517 85 PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDPQAVEAA 158 (250)
T ss_pred CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCHHHHHHH
Confidence 345677778877777544 222211 12223222 36789999999986 777765544 676 699999999988888
Q ss_pred HHHcCCCEE---eeCCChHHHHHhcCCccEEEEcCCCc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 83 VERLGADSF---LVSRDQDEMQAAMGTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 83 ~~~~g~~~v---~~~~~~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++++....+ +.-... ...+|+++.+.... ..+..+.+.|+|||+++..|...
T Consensus 159 ~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~ 216 (250)
T PRK00517 159 RENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE 216 (250)
T ss_pred HHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence 774321111 110000 01599998766543 23557888999999999988654
No 157
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.28 E-value=2.6e-05 Score=58.66 Aligned_cols=111 Identities=17% Similarity=0.308 Sum_probs=78.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cC-CC-EE---eeCCChHHH-------HHhc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LG-AD-SF---LVSRDQDEM-------QAAM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g-~~-~v---~~~~~~~~~-------~~~~ 104 (173)
-.++.|+|.|| +++|..++.-....|++++.+++..++++.+.++ .+ .+ .. .|-++.+.. ....
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 35799999999 8999999998889999999998888877777332 23 23 11 222333222 2334
Q ss_pred CCccEEEEcCCCc-------------------------cchHHHHHhhhcC--CEEEEeCCCCCCcccCccccc
Q 030694 105 GTMDGIIDTVSAV-------------------------HPLMPLIGLLKSQ--GKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 105 ~~~d~vid~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+++|+.+++.|-. .....++..|++. |+++.+++..|...+|...++
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y 163 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY 163 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence 6999999999974 1234667777544 999999998887777776543
No 158
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.27 E-value=1.8e-05 Score=57.97 Aligned_cols=99 Identities=21% Similarity=0.362 Sum_probs=68.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CCEEe--eCCChHHHHH-------hcCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---ADSFL--VSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~~v~--~~~~~~~~~~-------~~~~~d 108 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+. ....+ |-.+.+...+ ..+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999998 999999999999999999999999887766633232 22222 3333332222 234789
Q ss_pred EEEEcCCCcc-----------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 109 GIIDTVSAVH-----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 109 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.++.+.|... .++..+++++++|+++.+++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 9999998531 1345556677789999888654
No 159
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=98.27 E-value=2.7e-05 Score=55.90 Aligned_cols=98 Identities=15% Similarity=0.172 Sum_probs=69.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHH---cC-CC--EEeeCCChHHHHHhcCCccE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVER---LG-AD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~---~g-~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
..+.++++++.+|+|. |..++.+++..+ .+|++++.+++..+.++++ +| .+ .++..+..+.+....+.+|.
T Consensus 36 l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~ 114 (198)
T PRK00377 36 LRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDR 114 (198)
T ss_pred cCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCE
Confidence 3458999999999986 888888887654 4899999999988877653 44 22 23332223334444468999
Q ss_pred EEEcCCCc---cchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAV---HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~---~~~~~~~~~l~~~G~~v~~ 136 (173)
+|...+.. ..+..+.+.|+|+|+++..
T Consensus 115 V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 115 IFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred EEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 99866532 3466778899999998864
No 160
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=98.27 E-value=6.8e-06 Score=58.05 Aligned_cols=90 Identities=21% Similarity=0.319 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|++|.|+|.|.+|..+++.++..|++|++.++.........+ .+.. .. .++++....|+++.+++...
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-~~~~----~~---~l~ell~~aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-FGVE----YV---SLDELLAQADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-TTEE----ES---SHHHHHHH-SEEEE-SSSSTTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhccc-ccce----ee---ehhhhcchhhhhhhhhcccccc
Confidence 46999999999999999999999999999999998876553444 4431 11 23344456899998888431
Q ss_pred ---chHHHHHhhhcCCEEEEeCC
Q 030694 119 ---PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 ---~~~~~~~~l~~~G~~v~~g~ 138 (173)
.-...+..|+++..+|.++.
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSS
T ss_pred ceeeeeeeeeccccceEEEeccc
Confidence 22377888999998888874
No 161
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=98.26 E-value=3.1e-05 Score=54.48 Aligned_cols=99 Identities=19% Similarity=0.213 Sum_probs=72.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+++|+.++=+|+| +|...+++++... .+|+++++++++.+..+++ ||.+ .++..+.++.+.++. .+|.+|-
T Consensus 31 ~~~~g~~l~DIGaG-tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFI 108 (187)
T COG2242 31 RPRPGDRLWDIGAG-TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFI 108 (187)
T ss_pred CCCCCCEEEEeCCC-ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEE
Confidence 34899999999986 4677788885443 4999999999988877663 6644 455555666655433 7999996
Q ss_pred cCCCc--cchHHHHHhhhcCCEEEEeCCC
Q 030694 113 TVSAV--HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 113 ~~g~~--~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
--|.. ..++.++..|+++|++|.-...
T Consensus 109 GGg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 109 GGGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred CCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 55532 3577899999999999877543
No 162
>PRK12742 oxidoreductase; Provisional
Probab=98.26 E-value=2.8e-05 Score=56.87 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=66.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHHcCCCEE-eeCCChHHHHHh---cCCccEEEEcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVERLGADSF-LVSRDQDEMQAA---MGTMDGIIDTVS 115 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~---~~~~d~vid~~g 115 (173)
++++++|.|+ |++|..+++.+...|++|+.+.+ ++++.+.+....+...+ .|..+.+.+.+. .+++|++|++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 4789999998 99999999999999999888765 44555555444564432 344444333322 246999999988
Q ss_pred Ccc---c----------------------hHHHHHhhhcCCEEEEeCCCCC
Q 030694 116 AVH---P----------------------LMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 116 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
... . ...++..++.+|+++.+++..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 531 0 1233455667889998876543
No 163
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=98.25 E-value=3.7e-05 Score=53.76 Aligned_cols=98 Identities=19% Similarity=0.256 Sum_probs=72.2
Q ss_pred ccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChH
Q 030694 20 TAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (173)
Q Consensus 20 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 98 (173)
..-.|+...++...+.....--.+++++|+|+|. +|..++..++..|++|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~--------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK--------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch---------------------
Confidence 4556777777777777665547899999999986 599899999999999988887632
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+....+|++|.+++.+..+... .++++-.++.++.+.
T Consensus 80 ~l~~~l~~aDiVIsat~~~~ii~~~--~~~~~~viIDla~pr 119 (168)
T cd01080 80 NLKEHTKQADIVIVAVGKPGLVKGD--MVKPGAVVIDVGINR 119 (168)
T ss_pred hHHHHHhhCCEEEEcCCCCceecHH--HccCCeEEEEccCCC
Confidence 1222344689999999987644433 467777788888654
No 164
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=98.25 E-value=2.9e-05 Score=53.30 Aligned_cols=105 Identities=22% Similarity=0.271 Sum_probs=71.0
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEE
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~v 110 (173)
++.....-.++.+++|+|+|.+|...++.++..| .+|++++++.++.+.+.+.++... .....+ ..+..+++|++
T Consensus 9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvv 85 (155)
T cd01065 9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLI 85 (155)
T ss_pred HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEE
Confidence 4444433256789999999999999999888886 689999999888777666566421 011111 12235689999
Q ss_pred EEcCCCccc----hHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVHP----LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~~----~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.|++.... .......++++..++.++..+
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~~ 119 (155)
T cd01065 86 INTTPVGMKPGDELPLPPSLLKPGGVVYDVVYNP 119 (155)
T ss_pred EeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcCC
Confidence 999998642 112234567888888887543
No 165
>PRK05993 short chain dehydrogenase; Provisional
Probab=98.23 E-value=3.4e-05 Score=58.04 Aligned_cols=99 Identities=14% Similarity=0.222 Sum_probs=68.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHH----HHh----cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEM----QAA----MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~----~~~----~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++++.+.+ .+...+ .|..+.+.+ +++ .+.+|++|
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-EGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 4678999998 999999999999999999999999888877766 454332 355554322 222 14799999
Q ss_pred EcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 112 DTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 112 d~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
++.|... ....++..+++ .|+++.+++..+
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~ 138 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG 138 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh
Confidence 9987421 02345555543 478998876543
No 166
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.21 E-value=8.8e-05 Score=53.02 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=57.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CCE-EeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADS-FLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++.+++|+|+ |++|..+++.+...|++|+++.++.++.+.+.+.+. ... ..+..+.+...+...+.|++|.++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 46789999997 999999988888889999999999888777655442 221 223344444445556899999999
Q ss_pred CCcc
Q 030694 115 SAVH 118 (173)
Q Consensus 115 g~~~ 118 (173)
+...
T Consensus 106 ~~g~ 109 (194)
T cd01078 106 AAGV 109 (194)
T ss_pred CCCc
Confidence 8774
No 167
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.21 E-value=2.4e-05 Score=56.18 Aligned_cols=110 Identities=17% Similarity=0.206 Sum_probs=79.0
Q ss_pred CCCCEEEEEcC--ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-CEEeeCCChHHHHHh--------cCCccE
Q 030694 41 KPGMHVGVVGL--GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-DSFLVSRDQDEMQAA--------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~--g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~~v~~~~~~~~~~~~--------~~~~d~ 109 (173)
...+.|||.|+ |++|.+++.-....|+.|+++.|+-+++..+..++|. .+=+|-.+++.+.+. .++.|+
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 45678999986 9999999999999999999999999999998866883 333455554433222 248999
Q ss_pred EEEcCCCcc----------------------c--hHHHH--HhhhcCCEEEEeCCCCCCcccCcccc
Q 030694 110 IIDTVSAVH----------------------P--LMPLI--GLLKSQGKLVLLGAPEKPLELPAFPL 150 (173)
Q Consensus 110 vid~~g~~~----------------------~--~~~~~--~~l~~~G~~v~~g~~~~~~~~~~~~~ 150 (173)
.++..|.+= + +.+++ .+.+..|+++.+|+..+-.++++..+
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~i 151 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSI 151 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhh
Confidence 999988750 0 11222 34578899999998776555554443
No 168
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=98.20 E-value=9.4e-06 Score=60.88 Aligned_cols=113 Identities=23% Similarity=0.245 Sum_probs=80.3
Q ss_pred hhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCC
Q 030694 23 LLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRD 96 (173)
Q Consensus 23 l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~ 96 (173)
|..+-..++..+.....+++|+++|=+|+| .|.+++.+++..|++|+++.-++++.+.+++. .|-. .+.-
T Consensus 53 L~eAQ~~k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l--- 128 (283)
T COG2230 53 LEEAQRAKLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL--- 128 (283)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe---
Confidence 333445566667777778999999999998 68888999999999999999999988888773 3422 1111
Q ss_pred hHHHHHhcCCccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 97 QDEMQAAMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 97 ~~~~~~~~~~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...++..+.+|-|+ +.+|.. .-+..+.++|+|+|+++......
T Consensus 129 -~d~rd~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 129 -QDYRDFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred -ccccccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 11122334588874 556653 23668889999999998776544
No 169
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.20 E-value=4.2e-05 Score=58.22 Aligned_cols=75 Identities=24% Similarity=0.349 Sum_probs=57.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--CEE---eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--DSF---LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~~v---~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ |++|+.+++.+...|++|+++++++++++.+.++++. ... .|-.+.+.+.+. .+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999999999999999999999888777665652 111 344444333222 25799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999996
No 170
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=98.20 E-value=4e-05 Score=57.86 Aligned_cols=96 Identities=17% Similarity=0.284 Sum_probs=75.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|.|. +|.-++.++...|++|++..+... .+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l 195 (286)
T PRK14175 137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DM 195 (286)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hH
Confidence 46888777788888877657899999999964 999999999999999998876431 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.....|++|.++|.+..+.. ..++++..++.+|...
T Consensus 196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence 2334578999999999865555 3589999999999754
No 171
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=98.19 E-value=1.8e-05 Score=55.71 Aligned_cols=91 Identities=26% Similarity=0.321 Sum_probs=67.9
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc----cc
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV----HP 119 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~----~~ 119 (173)
|+|+|+ |.+|..+++.+...|.+|+++.|++++.+. . .+.+. ..|..+.+.+.+...++|.+|.++|.. ..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~-~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~ 77 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--S-PGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA 77 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--C-TTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--c-cccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence 689998 999999999999999999999999998877 2 34332 234555666667777999999999853 23
Q ss_pred hHHHHHhhhcCC--EEEEeCCC
Q 030694 120 LMPLIGLLKSQG--KLVLLGAP 139 (173)
Q Consensus 120 ~~~~~~~l~~~G--~~v~~g~~ 139 (173)
....++.++..| +++.++..
T Consensus 78 ~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 78 AKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccceeeecc
Confidence 445666665554 77776643
No 172
>PRK08265 short chain dehydrogenase; Provisional
Probab=98.19 E-value=4.8e-05 Score=56.72 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=68.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+.+. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999998 999999999999999999999999887776666555321 2344444333222 2479999
Q ss_pred EEcCCCcc------------------------chHHHHHhh-hcCCEEEEeCCCC
Q 030694 111 IDTVSAVH------------------------PLMPLIGLL-KSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~~ 140 (173)
|.+.|... ..+.++..+ +++|+++.+++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~ 139 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSIS 139 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchh
Confidence 99988520 112333444 5678999887644
No 173
>PRK06139 short chain dehydrogenase; Provisional
Probab=98.19 E-value=5.3e-05 Score=58.66 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=56.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++++.+.++ .|.+. ..|-.+.+.+.+. .++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 35789999998 9999999999999999999999998887665443 34332 2344554433332 258
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 85 iD~lVnnAG~ 94 (330)
T PRK06139 85 IDVWVNNVGV 94 (330)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 174
>PRK08339 short chain dehydrogenase; Provisional
Probab=98.15 E-value=8.9e-05 Score=55.44 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=68.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC---EEeeCCChHHHHHh------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---SFLVSRDQDEMQAA------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~------~~~~ 107 (173)
++++++|.|+ +++|+..++.+...|++|+++++++++.+.+.+.+ +.. ...|-.+.+.+++. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4789999998 89999999999999999999999988776665433 322 12344444333222 2479
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
|+++++.|... ....+++.|+. .|+++.+++...
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 99999998531 12345566643 389999876543
No 175
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.14 E-value=1.2e-05 Score=57.25 Aligned_cols=76 Identities=16% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CCEEeeCCChHHHHH----h---cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
.|.+|||.|+ .++|+..++.....|=+|++..|+++++++++..+. ...+.|-.+.+..++ + ....++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 4789999987 799999999999999999999999999999999655 233445444432222 2 23789999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
++.|..
T Consensus 84 NNAGIq 89 (245)
T COG3967 84 NNAGIQ 89 (245)
T ss_pred eccccc
Confidence 998874
No 176
>PRK07109 short chain dehydrogenase; Provisional
Probab=98.12 E-value=9.1e-05 Score=57.43 Aligned_cols=100 Identities=16% Similarity=0.304 Sum_probs=69.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++++.+.++ .|.+. ..|..+.+.+++. .+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4678999998 9999999999999999999999998877665443 34332 2344444433322 3589
Q ss_pred cEEEEcCCCcc-------------------------chHHHHHhhhc--CCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-------------------------PLMPLIGLLKS--QGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 141 (173)
|++|++.|... ....++..+++ .|+++.+++..+
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 99999998531 11234555654 589999886543
No 177
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=98.11 E-value=1.2e-05 Score=58.09 Aligned_cols=100 Identities=29% Similarity=0.273 Sum_probs=64.8
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCE-EeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADS-FLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~~~~~d~ 109 (173)
....+++|++||-+|+| .|..++-+++..|. +|+.+++.++-.+.+++. ++.+. .+...+...-......||.
T Consensus 66 ~~L~l~pg~~VLeIGtG-sGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~~~apfD~ 144 (209)
T PF01135_consen 66 EALDLKPGDRVLEIGTG-SGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWPEEAPFDR 144 (209)
T ss_dssp HHTTC-TT-EEEEES-T-TSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTGGG-SEEE
T ss_pred HHHhcCCCCEEEEecCC-CcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccccCCCcCE
Confidence 44446999999999987 57778888887775 699999988766666554 34322 1222222111112348999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++-+.+-+..-...++.|++||+++..
T Consensus 145 I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 145 IIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp EEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred EEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 998888876566888999999999874
No 178
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=98.11 E-value=5.9e-05 Score=57.02 Aligned_cols=96 Identities=19% Similarity=0.232 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+++++|+|+|++|.+++..++..| .+|+++.|+.++.+.+.+.++...-+.. ..+ ..+...++|++|+|++....
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~-~~~~~~~~DivInaTp~g~~ 198 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE-LQEELADFDLIINATSAGMS 198 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc-chhccccCCEEEECCcCCCC
Confidence 56789999999999999999999999 5999999999988877765552210111 001 11233579999999986521
Q ss_pred -----hHHHHHhhhcCCEEEEeCC
Q 030694 120 -----LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 -----~~~~~~~l~~~G~~v~~g~ 138 (173)
.......++++..++.+-.
T Consensus 199 ~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 199 GELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CCCCCCCCCHHHcCCCCEEEEeec
Confidence 1123456777777777743
No 179
>PRK06484 short chain dehydrogenase; Validated
Probab=98.10 E-value=7.9e-05 Score=60.98 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=71.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ +++|+..++.+...|++|+++++++++.+.+.+.++... ..|-.+.+.+++. .+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5788999998 999999999999999999999999888887777565332 2344444333222 2579999
Q ss_pred EEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 111 IDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 111 id~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|.+.|... ....++..++.+|+++.+++..+
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 99988520 12344556666799999886543
No 180
>PRK07576 short chain dehydrogenase; Provisional
Probab=98.10 E-value=6.2e-05 Score=56.23 Aligned_cols=76 Identities=28% Similarity=0.329 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
.++++++|.|+ |++|...++.+...|++|+++++++++.+...+.+ +.. . ..|-.+.+.+.+ . .++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887665543323 222 1 234444333322 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998864
No 181
>PRK06500 short chain dehydrogenase; Provisional
Probab=98.10 E-value=0.00012 Score=53.95 Aligned_cols=75 Identities=20% Similarity=0.325 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE---eeCCChHHHH-------HhcCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF---LVSRDQDEMQ-------AAMGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v---~~~~~~~~~~-------~~~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.++++.... .|..+.+... +..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999998 9999999999999999999999988777776665664321 2333332221 223579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999885
No 182
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=98.10 E-value=4.4e-05 Score=57.85 Aligned_cols=76 Identities=26% Similarity=0.268 Sum_probs=55.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
++++++|+|+|+.+.+++..+...|+ +|+++.|+.+|.+.+.+.++... +......+...+....+|++|+|++..
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence 57899999999999999999999998 89999999998888876565321 111111122223345799999999875
No 183
>PRK07825 short chain dehydrogenase; Provisional
Probab=98.08 E-value=0.00013 Score=54.58 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CCE-EeeCCChHHHH-------HhcCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-ADS-FLVSRDQDEMQ-------AAMGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~~-v~~~~~~~~~~-------~~~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.++ ... ..|-.+.+.+. +..+++|++|
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999998 999999999988899999999999888776655455 221 23444443322 2235899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99885
No 184
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=98.07 E-value=1.2e-05 Score=56.31 Aligned_cols=98 Identities=21% Similarity=0.276 Sum_probs=67.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeC-C-----------------C--hHHHH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVS-R-----------------D--QDEMQ 101 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~-~-----------------~--~~~~~ 101 (173)
+..+|+|+|+|.+|..|+++++.+|++++..+...++++.... .+...+... . . ...+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES-LGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH-TTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc-ccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 3478999999999999999999999999999999988888877 665433221 0 0 12233
Q ss_pred HhcCCccEEEEcCCCc------cchHHHHHhhhcCCEEEEeCCCC
Q 030694 102 AAMGTMDGIIDTVSAV------HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 102 ~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+....+|++|.+.-.. -.....++.|+++..++.++.-.
T Consensus 98 ~~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~ 142 (168)
T PF01262_consen 98 EFIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQ 142 (168)
T ss_dssp HHHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGG
T ss_pred HHHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecC
Confidence 3334789998543221 13458889999999999997543
No 185
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=98.05 E-value=8.4e-05 Score=59.20 Aligned_cols=96 Identities=14% Similarity=0.226 Sum_probs=66.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+.+++|+|+|++|.+++..+...|+ +++++.|+.+|.+.+.+.++...++. .+...+....+|++|+|++.+..
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~---~~~l~~~l~~aDiVI~aT~a~~~ 255 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY---LSELPQLIKKADIIIAAVNVLEY 255 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec---HHHHHHHhccCCEEEECcCCCCe
Confidence 568899999999999999999999997 79999999888887777676222322 23334445689999999999843
Q ss_pred hHHHHHhhhcC-CEEEEeCCCC
Q 030694 120 LMPLIGLLKSQ-GKLVLLGAPE 140 (173)
Q Consensus 120 ~~~~~~~l~~~-G~~v~~g~~~ 140 (173)
+=. ...++.. =.++.++.+.
T Consensus 256 vi~-~~~~~~~~~~~iDLavPR 276 (414)
T PRK13940 256 IVT-CKYVGDKPRVFIDISIPQ 276 (414)
T ss_pred eEC-HHHhCCCCeEEEEeCCCC
Confidence 211 1112211 1456777554
No 186
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=98.05 E-value=5.1e-05 Score=54.83 Aligned_cols=93 Identities=17% Similarity=0.127 Sum_probs=63.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.|++|+|+|+|.+|..-++.+...|++|++++.... .+..+.+ .|.-..+.. +.. .....+++++|-+++.+..-
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~-~~~i~~~~~-~~~--~~dl~~~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLLAE-QGGITWLAR-CFD--ADILEGAFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH-cCCEEEEeC-CCC--HHHhCCcEEEEECCCCHHHH
Confidence 578999999999999999999999999999987654 3344433 342222222 111 12345899999999998544
Q ss_pred HHHHHhhhcCCEEEEeCC
Q 030694 121 MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~ 138 (173)
.......+..|..+.+..
T Consensus 84 ~~i~~~a~~~~ilvn~~d 101 (205)
T TIGR01470 84 RRVAHAARARGVPVNVVD 101 (205)
T ss_pred HHHHHHHHHcCCEEEECC
Confidence 455566667777776543
No 187
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.04 E-value=9.5e-05 Score=56.24 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCe-EEEEeCCc---chHHHHHHHcCC---C---EEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVK-VTVISTSP---SKKSEAVERLGA---D---SFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~-v~~~~~~~---~~~~~~~~~~g~---~---~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++++++|+|+|++|++++..+...|++ |+++.|++ ++.+.+.+++.. . ...+..+.+...+....+|++
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil 203 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL 203 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence 4578999999999999999988899995 99999986 555555443421 1 122333333333344578999
Q ss_pred EEcCCCccc-----hHH-HHHhhhcCCEEEEeC
Q 030694 111 IDTVSAVHP-----LMP-LIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~~~-----~~~-~~~~l~~~G~~v~~g 137 (173)
|+|++-... ... ....+.++..++.+-
T Consensus 204 INaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 236 (289)
T PRK12548 204 VNATLVGMKPNDGETNIKDTSVFRKDLVVADTV 236 (289)
T ss_pred EEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence 999974310 000 124566666666664
No 188
>PRK06196 oxidoreductase; Provisional
Probab=98.04 E-value=0.00015 Score=55.65 Aligned_cols=75 Identities=23% Similarity=0.273 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHH----h---cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+..-. ..|-.+.+.+++ + .+++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 5789999998 999999999999999999999999887766654343111 234444433322 2 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99984
No 189
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=98.03 E-value=9.2e-05 Score=53.77 Aligned_cols=99 Identities=29% Similarity=0.274 Sum_probs=67.1
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCcc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d 108 (173)
....++++++||-+|+| .|..+..+++..+ .+|+.++.+++-.+.+++.+ |.. .++..+..... ...+.+|
T Consensus 70 ~~l~~~~g~~VLdIG~G-sG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD 147 (212)
T PRK13942 70 ELLDLKEGMKVLEIGTG-SGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYD 147 (212)
T ss_pred HHcCCCCcCEEEEECCc-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcC
Confidence 33445899999999987 4667777777665 59999999998877776643 322 22222211110 0124799
Q ss_pred EEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 109 GIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 109 ~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
.++-...........++.|++||+++..
T Consensus 148 ~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 148 RIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred EEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 9987666565667888999999998765
No 190
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=98.03 E-value=0.00012 Score=55.06 Aligned_cols=103 Identities=20% Similarity=0.123 Sum_probs=68.1
Q ss_pred HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEEeeCCChHHHHHhcCCccE
Q 030694 33 PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 33 ~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~~~~d~ 109 (173)
++.+.....++++++|+|+|++|.+++..+...|++|+++.+++++.+.+.+.++. ..... .+. .....+|+
T Consensus 107 ~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~---~~~--~~~~~~Di 181 (270)
T TIGR00507 107 DLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFS---MDE--LPLHRVDL 181 (270)
T ss_pred HHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEec---hhh--hcccCccE
Confidence 34332333557899999999999999998888999999999998887776664432 11211 111 12247999
Q ss_pred EEEcCCCcc--ch---HHHHHhhhcCCEEEEeCCCC
Q 030694 110 IIDTVSAVH--PL---MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 110 vid~~g~~~--~~---~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+|++... .. ......++++..++.+...+
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p 217 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNP 217 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCC
Confidence 999999741 11 11234577777888776433
No 191
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=98.03 E-value=4.8e-05 Score=54.85 Aligned_cols=106 Identities=13% Similarity=0.014 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+++|+|+|+|.+|...++.+...|++|+++.+... ++..+.. -+.- ..... .+......++|++|-+++.+.
T Consensus 8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~-~~~i-~~~~~--~~~~~~l~~adlViaaT~d~e- 82 (202)
T PRK06718 8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLVE-EGKI-RWKQK--EFEPSDIVDAFLVIAATNDPR- 82 (202)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHh-CCCE-EEEec--CCChhhcCCceEEEEcCCCHH-
Confidence 3688999999999999999988889999999976532 2222222 1211 11211 111222458999999999995
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
++..+...+..+.++.+...+....+-.....
T Consensus 83 lN~~i~~~a~~~~lvn~~d~~~~~~f~~Pa~~ 114 (202)
T PRK06718 83 VNEQVKEDLPENALFNVITDAESGNVVFPSAL 114 (202)
T ss_pred HHHHHHHHHHhCCcEEECCCCccCeEEEeeEE
Confidence 56555555555666655433333333333333
No 192
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=98.02 E-value=0.00022 Score=46.66 Aligned_cols=98 Identities=17% Similarity=0.252 Sum_probs=66.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccEEEE
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~vid 112 (173)
.+.++++++-+|+|. |..+..+++..+ .+|++++.++...+.+++. ++.. .++..+.........+.+|+++.
T Consensus 16 ~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~ 94 (124)
T TIGR02469 16 RLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFI 94 (124)
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEE
Confidence 346788999999975 888888888764 5999999999888777653 3322 23322211112223358999997
Q ss_pred cCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 113 TVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
..+.. ..++.+.+.|+++|+++...
T Consensus 95 ~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 95 GGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 65433 24678889999999988654
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=98.02 E-value=0.00015 Score=53.31 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~ 106 (173)
.++++++|+|+ |++|..++..+...|++|+++++++++...+.+.+ +.. . ..|-.+.+.+.+. .++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887666554322 322 1 2244444333222 257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (250)
T PRK12939 85 LDGLVNNAGI 94 (250)
T ss_pred CCEEEECCCC
Confidence 9999999986
No 194
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=98.02 E-value=1.5e-05 Score=60.10 Aligned_cols=108 Identities=31% Similarity=0.285 Sum_probs=64.4
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C-EEeeCCChHHH
Q 030694 26 AGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D-SFLVSRDQDEM 100 (173)
Q Consensus 26 ~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~-~v~~~~~~~~~ 100 (173)
+-.--+..+.....+++|++||-+|+| .|..+..+++..|++|+++..++++.+.+++.. |. + .-+...+.
T Consensus 46 AQ~~k~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~--- 121 (273)
T PF02353_consen 46 AQERKLDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY--- 121 (273)
T ss_dssp HHHHHHHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G---
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec---
Confidence 333334445555667999999999997 677788888888999999999999988887643 31 1 11111111
Q ss_pred HHhcCCccEEE-----EcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 101 QAAMGTMDGII-----DTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 101 ~~~~~~~d~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
.++...+|.|+ +.+|.+ ..+..+.+.|+|||+++.-.
T Consensus 122 ~~~~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 122 RDLPGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp GG---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred cccCCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 22344899985 445433 23667889999999987543
No 195
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=98.01 E-value=0.00012 Score=55.59 Aligned_cols=97 Identities=26% Similarity=0.244 Sum_probs=65.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC---CC-EEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG---AD-SFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g---~~-~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+++++|+-+|+|. |..+..+++ .|+ +|++++.++...+.++++.. .. .+.... .+......+++|+++....
T Consensus 158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~-~~~~~~~~~~fDlVvan~~ 234 (288)
T TIGR00406 158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL-IYLEQPIEGKADVIVANIL 234 (288)
T ss_pred CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe-cccccccCCCceEEEEecC
Confidence 6789999999986 777766665 565 89999999988887776432 11 111111 1111122348999997655
Q ss_pred Cc---cchHHHHHhhhcCCEEEEeCCCC
Q 030694 116 AV---HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 116 ~~---~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.. ..+..+.+.|+|||.++..|...
T Consensus 235 ~~~l~~ll~~~~~~LkpgG~li~sgi~~ 262 (288)
T TIGR00406 235 AEVIKELYPQFSRLVKPGGWLILSGILE 262 (288)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEEeCcH
Confidence 43 23557789999999999988644
No 196
>PRK08618 ornithine cyclodeaminase; Validated
Probab=98.00 E-value=7.8e-05 Score=57.64 Aligned_cols=101 Identities=19% Similarity=0.256 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHH-HHCCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFA-KAMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~-~~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..|...++.. ...++ +|.++++++++.+.+.+.+ +.. +....+ .++.....|+++.|+
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~---~~~~~~~aDiVi~aT 200 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS---ADEAIEEADIIVTVT 200 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC---HHHHHhcCCEEEEcc
Confidence 5678999999999998777654 45676 8999999998877766544 332 222222 223446899999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCCCC-CcccCc
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAPEK-PLELPA 147 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~ 147 (173)
+....+- . ..+++|-.+..+|.... ...++.
T Consensus 201 ~s~~p~i-~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 201 NAKTPVF-S-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred CCCCcch-H-HhcCCCcEEEecCCCCcccccCCH
Confidence 9885433 3 78899999999997543 334443
No 197
>PRK06484 short chain dehydrogenase; Validated
Probab=98.00 E-value=0.00019 Score=58.72 Aligned_cols=76 Identities=22% Similarity=0.385 Sum_probs=57.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~ 109 (173)
.++++++|.|+ +++|...++.+...|++|+.++++.++++.+.++++... ..|-.+.+.+++. .+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999998 899999999999999999999999888877766666432 3444444333222 257999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999875
No 198
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.99 E-value=0.00021 Score=53.21 Aligned_cols=75 Identities=20% Similarity=0.301 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CC-C---EEeeCCChHHHHH----h---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GA-D---SFLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~-~---~v~~~~~~~~~~~----~---~~ 105 (173)
.+++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.+ +. . ...|-.+.+.+++ + .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999998 89999999999999999999999988766554432 11 1 1234444433322 2 25
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 199
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=97.99 E-value=6.2e-05 Score=56.85 Aligned_cols=96 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.++++++|+|+|+.+.+++..++..|+ +++++.|+.+|.+.+.+.++.... +............ .+|++|+|++...
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-~~dliINaTp~Gm 202 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-EADLLINATPVGM 202 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-ccCEEEECCCCCC
Confidence 458999999999999999999999997 899999999998888876663221 0111111111111 5899999998642
Q ss_pred chH-----HHHHhhhcCCEEEEeC
Q 030694 119 PLM-----PLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 ~~~-----~~~~~l~~~G~~v~~g 137 (173)
.-. ....++++.-.+..+=
T Consensus 203 ~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 203 AGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCcHHhcCcCCEEEEec
Confidence 110 0145566666665553
No 200
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.99 E-value=0.00022 Score=53.59 Aligned_cols=76 Identities=18% Similarity=0.228 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.+.+. .+++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 3578999998 999999999999999999999999888776666333211 2344444333222 2479999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+.+.|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999863
No 201
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=97.98 E-value=6.2e-05 Score=57.08 Aligned_cols=94 Identities=19% Similarity=0.275 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC----CEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----DSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|+.|.+++..+...|+ +|++++++.+|.+.+.+.++. ..+.... ...+....+|++|+|++
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAALAAADGLVHATP 201 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhhCCCCEEEECCc
Confidence 456899999999999999999999998 899999999988877665531 1222211 11223357999999975
Q ss_pred Ccc----chHHHHHhhhcCCEEEEeC
Q 030694 116 AVH----PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 116 ~~~----~~~~~~~~l~~~G~~v~~g 137 (173)
... ...-....++++..++.+-
T Consensus 202 ~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 202 TGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred CCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 320 0111123466666665554
No 202
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.98 E-value=0.00016 Score=58.28 Aligned_cols=75 Identities=17% Similarity=0.259 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--chHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~--~~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |++|...++.+...|++|+++++++ ++++.+.++++... ..|-.+.+.+.+. .+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 5789999998 9999999999999999999998743 33444444455332 3455554433322 2479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 203
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.98 E-value=0.00019 Score=53.13 Aligned_cols=76 Identities=25% Similarity=0.377 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |.+|+.+++.+...|++|+++++++++.+.+.+.+ |... ..|-.+.+.+++. .+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999999999999999987766554433 2211 1244444333322 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 89 d~li~~ag~~ 98 (255)
T PRK07523 89 DILVNNAGMQ 98 (255)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 204
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.97 E-value=0.00018 Score=52.53 Aligned_cols=75 Identities=23% Similarity=0.269 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC---CEE--eeCCChHHHHH----h---cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA---DSF--LVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~---~~v--~~~~~~~~~~~----~---~~~~d 108 (173)
.+.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+.. -+. .|..+.+.+.+ + .+++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999998 9999999999888999999999988877666554431 111 23333332222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999875
No 205
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.97 E-value=0.00027 Score=53.17 Aligned_cols=99 Identities=16% Similarity=0.186 Sum_probs=64.5
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcch---HHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
+++++||.|+ + ++|...++.+...|++|++.+++++. .+.+.++.|.... .|-.+.+.++.+ .+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 5789999998 4 89999999999999999999887532 2333232453322 344444333222 258
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+++++.|... .....+..|+.+|+++.+++..
T Consensus 86 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~ 148 (271)
T PRK06505 86 LDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGG 148 (271)
T ss_pred CCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCC
Confidence 999999998420 1223445666678998887544
No 206
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.97 E-value=0.00018 Score=54.41 Aligned_cols=94 Identities=19% Similarity=0.220 Sum_probs=66.2
Q ss_pred hhHHHHHHHHHHhhCCCCCCCEEEEEcCCh-HHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH
Q 030694 24 LCAGITVYSPLRFYGLDKPGMHVGVVGLGG-LGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA 102 (173)
Q Consensus 24 ~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~-~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 102 (173)
+++-......+..+...-+|++++|+|+|+ +|...+.++...|++|++..+... .+.+
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~---~L~~------------------ 198 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ---NLPE------------------ 198 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch---hHHH------------------
Confidence 444433344455555557899999999976 999999999999998888766321 1111
Q ss_pred hcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 103 AMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 103 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
...++|++|.++|.+..+.. ..++++..++.+|...
T Consensus 199 ~~~~aDIvI~AtG~~~~v~~--~~lk~gavViDvg~n~ 234 (283)
T PRK14192 199 LVKQADIIVGAVGKPELIKK--DWIKQGAVVVDAGFHP 234 (283)
T ss_pred HhccCCEEEEccCCCCcCCH--HHcCCCCEEEEEEEee
Confidence 12478999999997754433 5589999999998543
No 207
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.97 E-value=7.2e-05 Score=59.11 Aligned_cols=91 Identities=18% Similarity=0.204 Sum_probs=64.1
Q ss_pred EEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 46 VGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 46 vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
|+|+|+|.+|..+++.+...+- +|++.+++.++.+.+.+.+. ....+|..+.+.+.+...+.|+||+|+|....
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~ 80 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG 80 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence 6899999999999999888764 89999999999888876422 12345666667778888899999999998744
Q ss_pred hHHHHHhhhcCCEEEEe
Q 030694 120 LMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~ 136 (173)
..-+-.|++.|-.++..
T Consensus 81 ~~v~~~~i~~g~~yvD~ 97 (386)
T PF03435_consen 81 EPVARACIEAGVHYVDT 97 (386)
T ss_dssp HHHHHHHHHHT-EEEES
T ss_pred HHHHHHHHHhCCCeecc
Confidence 44455666677777774
No 208
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.96 E-value=0.00024 Score=52.94 Aligned_cols=75 Identities=19% Similarity=0.261 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+.+.+.+. .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 89999999999999999999999887766554432 322 1 2344554443322 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999884
No 209
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.96 E-value=0.00023 Score=52.37 Aligned_cols=75 Identities=19% Similarity=0.278 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CC---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--AD---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|+|+ |.+|..+++.+...|++|+++++++++.+.+...+. .. ...|-.+.+.++.. .+++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999998 999999999999999999999999887766655343 11 12233444333222 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999986
No 210
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=97.95 E-value=3.2e-05 Score=49.65 Aligned_cols=90 Identities=20% Similarity=0.170 Sum_probs=61.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-++++|+|+|+|.+|..-++.+...|++|++++... +..+ +.-..... .+ +....+++++|-+++.+..-
T Consensus 5 l~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~~~~~---~~-~~~l~~~~lV~~at~d~~~n 74 (103)
T PF13241_consen 5 LKGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQLIRR---EF-EEDLDGADLVFAATDDPELN 74 (103)
T ss_dssp -TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCEEEES---S--GGGCTTESEEEE-SS-HHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHHHHhh---hH-HHHHhhheEEEecCCCHHHH
Confidence 368999999999999999999999999999999886 2222 22222221 11 23456899999999998654
Q ss_pred HHHHHhhhcCCEEEEeCCCC
Q 030694 121 MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~~~ 140 (173)
+......+..|..+.+...+
T Consensus 75 ~~i~~~a~~~~i~vn~~D~p 94 (103)
T PF13241_consen 75 EAIYADARARGILVNVVDDP 94 (103)
T ss_dssp HHHHHHHHHTTSEEEETT-C
T ss_pred HHHHHHHhhCCEEEEECCCc
Confidence 55566666688888886544
No 211
>CHL00194 ycf39 Ycf39; Provisional
Probab=97.94 E-value=0.00025 Score=54.45 Aligned_cols=94 Identities=21% Similarity=0.251 Sum_probs=65.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCCccc---
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSAVHP--- 119 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~~~~--- 119 (173)
+|+|+|+ |.+|..+++.+...|.+|++++|+.++...+.. .+.+.+ .|..+.+.+.+...++|++|.+++....
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE-WGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh-cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence 6999998 999999999999999999999998766554444 454332 2444555566666789999998764310
Q ss_pred ---------hHHHHHhhhcCC--EEEEeCCC
Q 030694 120 ---------LMPLIGLLKSQG--KLVLLGAP 139 (173)
Q Consensus 120 ---------~~~~~~~l~~~G--~~v~~g~~ 139 (173)
...+++.++..| +++.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 123445554444 78887753
No 212
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=97.93 E-value=9.8e-05 Score=51.81 Aligned_cols=90 Identities=23% Similarity=0.366 Sum_probs=64.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CCEEeeCCChHHHHHhcCCccEEEEcCCCc--c-
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--ADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--H- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--~- 118 (173)
+|.|+|+ |.+|....+-++.+|..|++++|+++|....+. .. ...+++. ..+.+...++|+||++.|.. .
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~-~~i~q~Difd~---~~~a~~l~g~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQG-VTILQKDIFDL---TSLASDLAGHDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccccc-ceeecccccCh---hhhHhhhcCCceEEEeccCCCCCh
Confidence 6889998 999999999999999999999999988765432 21 1113322 22334556999999999976 1
Q ss_pred ------chHHHHHhhhcCC--EEEEeCC
Q 030694 119 ------PLMPLIGLLKSQG--KLVLLGA 138 (173)
Q Consensus 119 ------~~~~~~~~l~~~G--~~v~~g~ 138 (173)
..+.++..++..| |++.+|.
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 1234666676644 7888874
No 213
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.00031 Score=52.17 Aligned_cols=74 Identities=18% Similarity=0.270 Sum_probs=54.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CC---EEeeCCChHHHHH----h----cCCccEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD---SFLVSRDQDEMQA----A----MGTMDGI 110 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~---~v~~~~~~~~~~~----~----~~~~d~v 110 (173)
++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+..+ .. ...|-.+.+.+.+ . .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 57999998 999999999999999999999999888777766443 11 1234444433222 2 3478999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
+.+.|..
T Consensus 82 i~~ag~~ 88 (260)
T PRK08267 82 FNNAGIL 88 (260)
T ss_pred EECCCCC
Confidence 9999863
No 214
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.93 E-value=0.0001 Score=54.12 Aligned_cols=76 Identities=21% Similarity=0.358 Sum_probs=57.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhc---CCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAM---GTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~---~~~d~vid~~g 115 (173)
.++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+... ..|..+.+.+.+.. +++|++|.+.|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag 86 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG 86 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 35789999998 899999999999999999999999887777666455432 23555544443332 47999999998
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 87 ~ 87 (245)
T PRK07060 87 I 87 (245)
T ss_pred C
Confidence 5
No 215
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.92 E-value=0.00017 Score=52.10 Aligned_cols=99 Identities=25% Similarity=0.244 Sum_probs=66.4
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CC---CEEeeCCChHHHHHhcCCc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GA---DSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~---~~v~~~~~~~~~~~~~~~~ 107 (173)
....++++++||-+|+| .|..+..+++..+ .+|+.++.+++-.+.+++++ +. ..++..+..+... ..+.+
T Consensus 66 ~~l~~~~~~~VLDiG~G-sG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~f 143 (205)
T PRK13944 66 ELIEPRPGMKILEVGTG-SGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPF 143 (205)
T ss_pred HhcCCCCCCEEEEECcC-ccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCc
Confidence 33344789999999987 4767777777654 58999999988777666533 32 1233322221111 12479
Q ss_pred cEEEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 108 DGIIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 108 d~vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
|.++-+.......+.+++.|++||+++..
T Consensus 144 D~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 144 DAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred cEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 99997776665566788999999998764
No 216
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.92 E-value=0.00021 Score=55.09 Aligned_cols=97 Identities=22% Similarity=0.188 Sum_probs=68.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHH---cCCCEEeeCCChHHHHHh--cCCccEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVER---LGADSFLVSRDQDEMQAA--MGTMDGI 110 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~~~~~~--~~~~d~v 110 (173)
..++++++||.+|+| .|..++.+++..+. +|++++.+++..+.+++. .|.+.+... ..+..... .+.+|++
T Consensus 76 L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD~~~~~~~~~~fD~I 153 (322)
T PRK13943 76 VGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGDGYYGVPEFAPYDVI 153 (322)
T ss_pred cCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCChhhcccccCCccEE
Confidence 345889999999998 58888888887764 699999998877666553 454322111 11111111 2479999
Q ss_pred EEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 111 IDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 111 id~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
+.+.+........++.|+++|+++..
T Consensus 154 i~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 154 FVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred EECCchHHhHHHHHHhcCCCCEEEEE
Confidence 99888765566788999999998764
No 217
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.91 E-value=0.0005 Score=51.51 Aligned_cols=73 Identities=22% Similarity=0.305 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC----EEeeCCChHHHHH----h---cCCcc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD----SFLVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~----~v~~~~~~~~~~~----~---~~~~d 108 (173)
++++|+|+ |++|..+++.+...|++|+++++++++.+.+.++ .+.. ...|-.+.+.+.+ + .+++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 36899998 9999999999999999999999988766555332 2322 1245555433222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 81 ~lv~~ag~ 88 (272)
T PRK07832 81 VVMNIAGI 88 (272)
T ss_pred EEEECCCC
Confidence 99999985
No 218
>PRK04148 hypothetical protein; Provisional
Probab=97.91 E-value=0.00051 Score=46.03 Aligned_cols=112 Identities=14% Similarity=0.064 Sum_probs=72.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.++.+++++|.| .|...+..++..|.+|++++.+++..+.+++ .+.+.+.+.-. +.--++.+++|+++..-+.+...
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-~~~~~v~dDlf-~p~~~~y~~a~liysirpp~el~ 91 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-LGLNAFVDDLF-NPNLEIYKNAKLIYSIRPPRDLQ 91 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-hCCeEEECcCC-CCCHHHHhcCCEEEEeCCCHHHH
Confidence 457889999999 8876666777889999999999999988888 66544433211 11112455899999999998755
Q ss_pred HHHHHhhhcCC-EEEEeCCCCCCcccCccccccCcc
Q 030694 121 MPLIGLLKSQG-KLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 121 ~~~~~~l~~~G-~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
..+++.-++-| -++..-........++.-..+|..
T Consensus 92 ~~~~~la~~~~~~~~i~~l~~e~~~~~~kl~ny~~~ 127 (134)
T PRK04148 92 PFILELAKKINVPLIIKPLSGEEPIKELKLINYKGK 127 (134)
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCcceEEEecCCe
Confidence 55555544433 455444433332333333444444
No 219
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.91 E-value=0.00022 Score=54.25 Aligned_cols=95 Identities=18% Similarity=0.142 Sum_probs=75.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++|.|+|. +.+|.-++.++...|++|++..+.... .
T Consensus 138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~---------------------l 196 (301)
T PRK14194 138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD---------------------A 196 (301)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence 468887777777887776578999999998 699999999999999999998655331 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 197 ~e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 197 KALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 223346799999999987666555 8999999999843
No 220
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=97.91 E-value=3.9e-06 Score=55.67 Aligned_cols=50 Identities=40% Similarity=0.500 Sum_probs=36.8
Q ss_pred cCCCEEeeCCChHHHHHhcCCccEEEEcCC--CccchHHHHHhhhcCCEEEEeCC
Q 030694 86 LGADSFLVSRDQDEMQAAMGTMDGIIDTVS--AVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 86 ~g~~~v~~~~~~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|+++++||++.++ .-.+++|++||++| +...+..++++| ++|+++.++.
T Consensus 1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~ 52 (127)
T PF13602_consen 1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG 52 (127)
T ss_dssp CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S
T ss_pred CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC
Confidence 68999999997666 22469999999999 554456777888 9999999984
No 221
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.89 E-value=0.00018 Score=54.59 Aligned_cols=129 Identities=25% Similarity=0.285 Sum_probs=79.6
Q ss_pred eeEECCCCCCcccccchhhHHHHHHHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVER 85 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~ 85 (173)
.++++.+++.+- ......|++..-..-..++++++++=+|+| .|.+++..++ +|+ +|++++.++...+.++++
T Consensus 131 ~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcG-SGILaIAa~k-LGA~~v~g~DiDp~AV~aa~eN 204 (300)
T COG2264 131 LNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCG-SGILAIAAAK-LGAKKVVGVDIDPQAVEAAREN 204 (300)
T ss_pred eEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCC-hhHHHHHHHH-cCCceEEEecCCHHHHHHHHHH
Confidence 334444444333 334556655443333444799999999997 4766666655 777 799999998877777664
Q ss_pred c---CCCEEeeCCChHHHHHhc-CCccEEEEcCCCc---cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 86 L---GADSFLVSRDQDEMQAAM-GTMDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 86 ~---g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
. +....+............ +.+|+|+-+.=.. ...++..++++|+|++++.|....
T Consensus 205 a~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 205 ARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED 267 (300)
T ss_pred HHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence 2 222111011111222223 4899999777544 234577789999999999997653
No 222
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.89 E-value=0.00037 Score=52.53 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=67.1
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcCCCE--EeeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADS--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~~ 106 (173)
.+++++|.|+ +++|+.+++.+...|++|+++++++ ++.+.+.+.++... ..|-.+.+.+++ + .++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4789999997 4899999999999999999998875 23444434355332 234444433222 2 258
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+|++|++.|... .....++.|+++|+++.+++..+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 999999998410 13355667777899998875443
No 223
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=97.89 E-value=0.00022 Score=51.85 Aligned_cols=98 Identities=31% Similarity=0.334 Sum_probs=65.0
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
...++++++||-+|+| .|..+..+++..+. +|+.++.+++..+.+++.+ |.+ .++..+..+.. .....||+
T Consensus 72 ~l~~~~~~~VLDiG~G-sG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~ 149 (215)
T TIGR00080 72 LLELKPGMKVLEIGTG-SGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDR 149 (215)
T ss_pred HhCCCCcCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCE
Confidence 3345899999999987 46666777776553 6999999988777776543 322 22221111110 11247999
Q ss_pred EEEcCCCccchHHHHHhhhcCCEEEEe
Q 030694 110 IIDTVSAVHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 110 vid~~g~~~~~~~~~~~l~~~G~~v~~ 136 (173)
++-..........+++.|++||+++..
T Consensus 150 Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 150 IYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred EEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 986655555566888999999998765
No 224
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=97.88 E-value=0.0002 Score=54.28 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|+.+.+++..+...|+ +++++.|+.+|.+.+.+.+. ...+ ...+.....+....+|++++|++
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~~~~~~~~~~~divINaTp 203 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVIAAADGVVNATP 203 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecCHhHHHHHHhhcCEEEEcCC
Confidence 457899999999999999998888998 89999999988887766443 1112 11111111222347999999987
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
..
T Consensus 204 ~G 205 (283)
T PRK14027 204 MG 205 (283)
T ss_pred CC
Confidence 43
No 225
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.87 E-value=0.00016 Score=53.55 Aligned_cols=75 Identities=21% Similarity=0.277 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
++++++|+|+ |++|..+++.+...|++|+++++++++.+...+.++.. ...|..+.+.+++. .+++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999998 99999999999999999999999888776665545533 22355554433322 247999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
No 226
>PLN00203 glutamyl-tRNA reductase
Probab=97.86 E-value=0.00062 Score=55.75 Aligned_cols=98 Identities=24% Similarity=0.358 Sum_probs=67.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
.+.+|+|+|+|.+|.++++.+...|+ +|+++.++.++.+.+.+.++...+ .....+...+...+.|++|.|++.+..
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~~dl~~al~~aDVVIsAT~s~~pv 343 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPLDEMLACAAEADVVFTSTSSETPL 343 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecHhhHHHHHhcCCEEEEccCCCCCe
Confidence 47899999999999999999999998 799999999998888776642211 111222233445689999999987632
Q ss_pred -hHHHHHhhhcC----C---EEEEeCCCC
Q 030694 120 -LMPLIGLLKSQ----G---KLVLLGAPE 140 (173)
Q Consensus 120 -~~~~~~~l~~~----G---~~v~~g~~~ 140 (173)
....+..+.++ + .++.++.+.
T Consensus 344 I~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 344 FLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred eCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 23444444321 2 477777654
No 227
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00015 Score=53.77 Aligned_cols=77 Identities=19% Similarity=0.313 Sum_probs=56.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC----EEeeCCChHHHHH-------hcCCcc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~-------~~~~~d 108 (173)
.++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+.. ...|..+.+.+.+ ..+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999998 99999999999999999999999887776665534322 2234444433322 225899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
.+|.+.|..
T Consensus 89 ~vi~~ag~~ 97 (264)
T PRK12829 89 VLVNNAGIA 97 (264)
T ss_pred EEEECCCCC
Confidence 999999864
No 228
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=97.86 E-value=0.00041 Score=52.75 Aligned_cols=77 Identities=14% Similarity=0.210 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc---hHHHHHHHcCCC-----EEeeCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS---KKSEAVERLGAD-----SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~---~~~~~~~~~g~~-----~v~~~~~~~~~~~~~~~~d~vi 111 (173)
.++++++|+|+|+.+.+++..+...|+ +++++.|+++ |.+.+.+.++.. .+....+...+.+...++|+++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 467899999999899887777777888 8999999854 655555545421 1211111111222335799999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
+|++-.
T Consensus 202 NaTp~G 207 (288)
T PRK12749 202 NGTKVG 207 (288)
T ss_pred ECCCCC
Confidence 998753
No 229
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.86 E-value=0.00068 Score=50.06 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=52.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH----h---cCCccEEEEc
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MGTMDGIIDT 113 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~~~d~vid~ 113 (173)
+++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++.+. ..|-.+.+.+.+ + .+++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899998 999999999999999999999999888777766455332 123334332222 1 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 875
No 230
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.86 E-value=0.00023 Score=58.04 Aligned_cols=73 Identities=19% Similarity=0.243 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+.++++|+|+|.|.+|++++++++..|++|++.+.++++.+.+++ .|... +...... +....+|+++.+.|.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~-~g~~~-~~~~~~~---~~l~~~D~VV~SpGi~ 81 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPHAE-RGVAT-VSTSDAV---QQIADYALVVTSPGFR 81 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHh-CCCEE-EcCcchH---hHhhcCCEEEECCCCC
Confidence 356899999999999999999999999999999987766666655 67643 3222211 1224689999999987
No 231
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.86 E-value=0.00042 Score=50.95 Aligned_cols=73 Identities=16% Similarity=0.039 Sum_probs=51.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhc----CCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAM----GTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~----~~~d~vid~~g~ 116 (173)
.+++|.|+ |++|...++.+...|++|+++++++++.+.+.+..... ...|-.+.+.+.+.. ...|.++.+.|.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~ 81 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD 81 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence 57899998 99999999988889999999999988877776522211 123444544443332 346777777763
No 232
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00051 Score=50.56 Aligned_cols=98 Identities=19% Similarity=0.295 Sum_probs=62.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGADS---FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~ 106 (173)
++++++|.|+ |++|..+++.+...|++|+++.++.+ +.+.+... .+... ..|..+.+.+.+. .++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999998 99999999999999999999888653 33333221 23221 2344444433222 247
Q ss_pred ccEEEEcCCCc-------------------cchHHHHHhhhcCCEEEEeCCC
Q 030694 107 MDGIIDTVSAV-------------------HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 107 ~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+|++|.+.|.. ..++.+.+.+..+|+++.+++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 99999888653 1233444555566888888753
No 233
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.85 E-value=0.00017 Score=53.56 Aligned_cols=74 Identities=20% Similarity=0.265 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCC-CEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGA-DSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~-~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+++++|.|+ |++|...++.+...|++|+++++++. +.+.... ... ....|-.+.+.+.+..+++|++|++.|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDE-SPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhcc-CCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 4689999998 89999999999999999999998763 2222111 111 1234555555556666789999999985
No 234
>PRK09186 flagellin modification protein A; Provisional
Probab=97.85 E-value=0.0003 Score=51.99 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC---E-EeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD---S-FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~---~-v~~~~~~~~~~~~-------~~ 105 (173)
++++++|.|+ |++|...++.+...|++|+++.+++++.+.+.+.+ +.. . ..|-.+.+.+.+. .+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999999888776554433 221 1 2244444333222 24
Q ss_pred CccEEEEcCC
Q 030694 106 TMDGIIDTVS 115 (173)
Q Consensus 106 ~~d~vid~~g 115 (173)
++|++|.+.+
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 6999999986
No 235
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.85 E-value=0.00069 Score=50.05 Aligned_cols=75 Identities=21% Similarity=0.317 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |.+|...++.....|++|+++++++++.+.+...+ +.. ...|-.+.+.+.+. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999998 99999999999999999999999988766554433 322 12244444333222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999875
No 236
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=97.84 E-value=0.00021 Score=54.78 Aligned_cols=93 Identities=18% Similarity=0.236 Sum_probs=65.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
..+|.|+|+|.+|...++.++..|. +|+++++++++.+.+++ .|....+..+ ..+...+.|++|.|++....
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~-~g~~~~~~~~----~~~~~~~aDvViiavp~~~~~ 80 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARE-LGLGDRVTTS----AAEAVKGADLVILCVPVGASG 80 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHh-CCCCceecCC----HHHHhcCCCEEEECCCHHHHH
Confidence 4689999999999999998888885 89999999988888877 7742211111 12234579999999997631
Q ss_pred --hHHHHHhhhcCCEEEEeCCCC
Q 030694 120 --LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 120 --~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+......++++..++.+|...
T Consensus 81 ~v~~~l~~~l~~~~iv~dvgs~k 103 (307)
T PRK07502 81 AVAAEIAPHLKPGAIVTDVGSVK 103 (307)
T ss_pred HHHHHHHhhCCCCCEEEeCccch
Confidence 223334566777777776543
No 237
>PRK09242 tropinone reductase; Provisional
Probab=97.84 E-value=0.00055 Score=50.74 Aligned_cols=75 Identities=12% Similarity=0.235 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCCE---EeeCCChHHH----H---HhcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GADS---FLVSRDQDEM----Q---AAMG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~~---v~~~~~~~~~----~---~~~~ 105 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.+. ..|-.+.+.+ + +..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5789999998 99999999999999999999999887766554433 2111 1233333322 1 2235
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 89999999986
No 238
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.84 E-value=0.00054 Score=51.41 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=53.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH----h---cCCccEEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
+++++|.|+ |++|..+++.+...|++|++++++.++++.+.+.++... ..|..+.+.+.+ + .+++|.+|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 468999998 999999999998899999999999887776666444221 123334332222 1 24799999
Q ss_pred EcCCCc
Q 030694 112 DTVSAV 117 (173)
Q Consensus 112 d~~g~~ 117 (173)
.+.|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 999864
No 239
>PRK08589 short chain dehydrogenase; Validated
Probab=97.84 E-value=0.00052 Score=51.49 Aligned_cols=74 Identities=16% Similarity=0.315 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ +++|...++.+...|++|++++++ ++.+.+.+++ +.. ...|-.+.+.+.. + .+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 5789999998 899999999999999999999998 5544433323 321 1234444332222 2 2579
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999999875
No 240
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.83 E-value=0.00012 Score=50.85 Aligned_cols=90 Identities=23% Similarity=0.349 Sum_probs=61.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|-++|.|.+|...++-+...|++|++.++++++.+.+.+ .|.... .+..+ .....|++|-|+.+.......
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~g~~~~--~s~~e----~~~~~dvvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-AGAEVA--DSPAE----AAEQADVVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-TTEEEE--SSHHH----HHHHBSEEEE-SSSHHHHHHH
T ss_pred CEEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-hhhhhh--hhhhh----HhhcccceEeecccchhhhhh
Confidence 47889999999999999999999999999999999999988 564322 22222 233569999999986444443
Q ss_pred ------HHhhhcCCEEEEeCCCC
Q 030694 124 ------IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ------~~~l~~~G~~v~~g~~~ 140 (173)
+..++++..++.++..+
T Consensus 75 ~~~~~i~~~l~~g~iiid~sT~~ 97 (163)
T PF03446_consen 75 LFGENILAGLRPGKIIIDMSTIS 97 (163)
T ss_dssp HHCTTHGGGS-TTEEEEE-SS--
T ss_pred hhhhHHhhccccceEEEecCCcc
Confidence 44456677777777554
No 241
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.83 E-value=0.0003 Score=53.52 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=73.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
-+||+....+..+..+..--.|++|.|+|. +.+|.-++.++...|+.|+++. ++.+
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------- 194 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------- 194 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence 467877777777777766578999999995 9999999999999999999984 4321
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.++.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 195 l~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin 232 (296)
T PRK14188 195 LPAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN 232 (296)
T ss_pred HHHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence 1223446799999999987665554 8999999999853
No 242
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.83 E-value=0.00066 Score=48.86 Aligned_cols=80 Identities=21% Similarity=0.154 Sum_probs=56.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc-CCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM-GTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~-~~~d~vid~~g~~~~ 119 (173)
-+|++++|+|.|.+|..+++.+...|++|++.++++++.+.+.+.+|... ++.. ++. ..+|+++-|......
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~------~l~~~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPE------EIYSVDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-Ecch------hhccccCCEEEeccccccc
Confidence 46889999999999999999999999999999999988888877567542 2321 111 257777755443323
Q ss_pred hHHHHHhh
Q 030694 120 LMPLIGLL 127 (173)
Q Consensus 120 ~~~~~~~l 127 (173)
....+..|
T Consensus 99 ~~~~~~~l 106 (200)
T cd01075 99 NDDTIPQL 106 (200)
T ss_pred CHHHHHHc
Confidence 33444445
No 243
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.83 E-value=0.00044 Score=50.38 Aligned_cols=75 Identities=21% Similarity=0.376 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-EeeCCChHHHHH-------hcCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-FLVSRDQDEMQA-------AMGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v~~~~~~~~~~~-------~~~~~d~ 109 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.....+.+ +... ..|..+.+.+.+ ..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 4789999998 99999999999889999999999876644332222 2221 133333332222 2347999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999875
No 244
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.82 E-value=0.00056 Score=51.04 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCEE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ + ++|...++.+...|++|++..+++. +.+.+.+..|.... .|-.+.+.+++. .+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5788999998 4 7999999988889999999887642 23333332353322 344444333222 257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998874
No 245
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.82 E-value=0.0002 Score=53.35 Aligned_cols=75 Identities=21% Similarity=0.263 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHH----h---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQA----A---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~----~---~~~~d~v 110 (173)
++++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.++.. . ..|-.+.+.+++ . .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5789999998 89999999999999999999999988887776655532 1 223333332222 1 2479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|++.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
No 246
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.82 E-value=0.00053 Score=51.69 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=56.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C--CCEEeeCCChHHHHH-------hcCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G--ADSFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g--~~~v~~~~~~~~~~~-------~~~~~d 108 (173)
.|+.|||.|+ +++|+..++-...+|+++++++.+.+-.++-.++. | ..++.|-++.+.+.+ ..+.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 5899999998 79999998888889999999998877554444422 4 134556666543332 345899
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
+++++.|..
T Consensus 117 ILVNNAGI~ 125 (300)
T KOG1201|consen 117 ILVNNAGIV 125 (300)
T ss_pred EEEeccccc
Confidence 999999975
No 247
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.82 E-value=0.00014 Score=55.26 Aligned_cols=76 Identities=21% Similarity=0.338 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++++.+.+.+ +.. .. .|-.+.+.+.+. .+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 99999999999999999999999988776665433 322 11 233343332222 3489
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 248
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00054 Score=51.01 Aligned_cols=75 Identities=19% Similarity=0.324 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHh------cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAA------MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~------~~~~d~ 109 (173)
++++++|+|+ |++|...++.+...|++|+++++++++.+.+...+ +.. .. .|-.+.+.+... .+++|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 4678999998 99999999999999999999999988777665533 211 11 233333322222 257999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999886
No 249
>PRK07340 ornithine cyclodeaminase; Validated
Probab=97.81 E-value=0.00028 Score=54.06 Aligned_cols=100 Identities=17% Similarity=0.163 Sum_probs=71.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
....+++|+|+|..|.+.++.+.. .+. +|.++.+++++.+.+.+++... .+. . +..++...+.|+++.|++.
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~---~~~~~av~~aDiVitaT~s 198 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P---LDGEAIPEAVDLVVTATTS 198 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E---CCHHHHhhcCCEEEEccCC
Confidence 567899999999999998888764 665 7999999999888777756421 121 1 1223344689999999998
Q ss_pred ccchHHHHHhhhcCCEEEEeCCCC-CCcccC
Q 030694 117 VHPLMPLIGLLKSQGKLVLLGAPE-KPLELP 146 (173)
Q Consensus 117 ~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 146 (173)
...+-..+ ++||-.+..+|... +...++
T Consensus 199 ~~Pl~~~~--~~~g~hi~~iGs~~p~~~El~ 227 (304)
T PRK07340 199 RTPVYPEA--ARAGRLVVAVGAFTPDMAELA 227 (304)
T ss_pred CCceeCcc--CCCCCEEEecCCCCCCcccCC
Confidence 75433333 78999999999654 334555
No 250
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.0005 Score=51.79 Aligned_cols=75 Identities=21% Similarity=0.314 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++++.+.+.+ +... ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 99999999999999999999999887766554433 3221 2233343333222 3479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999985
No 251
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=97.80 E-value=0.0014 Score=48.07 Aligned_cols=102 Identities=17% Similarity=0.257 Sum_probs=65.7
Q ss_pred HHHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCe---EEEEeCC----cchH--------HHHHHHcCCCEEeeCC
Q 030694 31 YSPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVK---VTVISTS----PSKK--------SEAVERLGADSFLVSR 95 (173)
Q Consensus 31 ~~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~---v~~~~~~----~~~~--------~~~~~~~g~~~v~~~~ 95 (173)
..++.....--++.+++|+|+|+.|..++..+...|++ +++++++ .+|. +.++. ++... .+
T Consensus 13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~-~~~~~-~~-- 88 (226)
T cd05311 13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKE-TNPEK-TG-- 88 (226)
T ss_pred HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHH-hccCc-cc--
Confidence 34454444335678999999999999999998889975 9999998 4442 22233 43211 11
Q ss_pred ChHHHHHhcCCccEEEEcCCCccch-HHHHHhhhcCCEEEEeCCC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ +.+...++|++|++++.. .+ ...++.|+++..+..+..+
T Consensus 89 -~~-l~~~l~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~lsnP 130 (226)
T cd05311 89 -GT-LKEALKGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALANP 130 (226)
T ss_pred -CC-HHHHHhcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeCCC
Confidence 12 212334699999999843 34 3667778777766655533
No 252
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=97.80 E-value=0.00028 Score=48.82 Aligned_cols=89 Identities=17% Similarity=0.082 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
-.|++|+|+|+|.+|..-++.+...|++|++++ ++..+.+.+ ++.-.. ... .+......++|+++-+++... .
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~-l~~i~~-~~~--~~~~~dl~~a~lViaaT~d~e-~ 83 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEMKE-LPYITW-KQK--TFSNDDIKDAHLIYAATNQHA-V 83 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHHHh-ccCcEE-Eec--ccChhcCCCceEEEECCCCHH-H
Confidence 468999999999999999998888999999885 344455555 553222 211 111122358999999999985 5
Q ss_pred HHHHHhhhcCCEEEEe
Q 030694 121 MPLIGLLKSQGKLVLL 136 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~ 136 (173)
+..+...++.+.++..
T Consensus 84 N~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 84 NMMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHHCCcEEE
Confidence 6555555444434443
No 253
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=97.80 E-value=0.00038 Score=48.23 Aligned_cols=95 Identities=20% Similarity=0.321 Sum_probs=63.1
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|+......+.++.
T Consensus 14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~------------------ 75 (160)
T PF02882_consen 14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE------------------ 75 (160)
T ss_dssp SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH------------------
T ss_pred CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc------------------
Confidence 5678887777888888776678999999998 689999999999999999987665433322
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.....|+++.++|.+..+.. ..+++|..++.+|.
T Consensus 76 ---~~~~ADIVVsa~G~~~~i~~--~~ik~gavVIDvG~ 109 (160)
T PF02882_consen 76 ---ITRRADIVVSAVGKPNLIKA--DWIKPGAVVIDVGI 109 (160)
T ss_dssp ---HHTTSSEEEE-SSSTT-B-G--GGS-TTEEEEE--C
T ss_pred ---eeeeccEEeeeecccccccc--ccccCCcEEEecCC
Confidence 23357899999998865443 35788888998885
No 254
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.80 E-value=0.00057 Score=50.63 Aligned_cols=75 Identities=16% Similarity=0.312 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEE---eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSF---LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~~-------~~~~ 107 (173)
+++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+. .+.... .|-.+.+.+.+. .+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999998766555443 333221 233444333222 2469
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999985
No 255
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.79 E-value=0.00027 Score=52.65 Aligned_cols=75 Identities=27% Similarity=0.277 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHH----HHh---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEM----QAA---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~----~~~---~~~~d~v 110 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+..+.. . ..|-.+.+.. ++. .+++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4789999998 89999999999999999999999988777776644422 1 1243443222 222 2579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 256
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.79 E-value=0.00053 Score=50.93 Aligned_cols=75 Identities=20% Similarity=0.340 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCC-EE--eeCCChHHHHHh---cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GAD-SF--LVSRDQDEMQAA---MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~---~~~~d~v 110 (173)
++++++|.|+ +++|...++.+...|++|+++++++++.+.+.+.+ +.. .. .|-.+.+.+.+. .+++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 4789999998 89999999999999999999999988766654433 321 11 233343333332 3579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999885
No 257
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=97.77 E-value=0.00034 Score=55.34 Aligned_cols=96 Identities=27% Similarity=0.408 Sum_probs=70.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+.++||+|+|-+|..++..+...|. +|++..|+.+|...+.+++|+..+ ..+.+......+|++|.+++.+..
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~----~l~el~~~l~~~DvVissTsa~~~ 251 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV----ALEELLEALAEADVVISSTSAPHP 251 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee----cHHHHHHhhhhCCEEEEecCCCcc
Confidence 478999999999999999999999996 899999999998888777995433 234444455689999999998732
Q ss_pred ---hHHHHHhhhcC-C-EEEEeCCCC
Q 030694 120 ---LMPLIGLLKSQ-G-KLVLLGAPE 140 (173)
Q Consensus 120 ---~~~~~~~l~~~-G-~~v~~g~~~ 140 (173)
-......++.. . .++.++.+.
T Consensus 252 ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 252 IITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred ccCHHHHHHHHhcccCeEEEEecCCC
Confidence 11333344332 2 466777654
No 258
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=97.77 E-value=0.00034 Score=51.53 Aligned_cols=102 Identities=25% Similarity=0.311 Sum_probs=73.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---CE-EeeCCChHHHHHhcCCccEEEEc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---DS-FLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---~~-v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
..++|++||=+|+| +|-.+..+++..|- +|++++.+++-++.+++.... .. -+...+...+.-....+|.+..+
T Consensus 48 ~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~ 126 (238)
T COG2226 48 GIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTIS 126 (238)
T ss_pred CCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEee
Confidence 33589999999877 68888999998875 999999999988888885442 11 01122222222122379999888
Q ss_pred CCCc------cchHHHHHhhhcCCEEEEeCCCCC
Q 030694 114 VSAV------HPLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 114 ~g~~------~~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.|-. ..+..+.+.|+|||+++.+.....
T Consensus 127 fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 127 FGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred ehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 7765 257788999999999998876554
No 259
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.76 E-value=0.00066 Score=51.08 Aligned_cols=97 Identities=22% Similarity=0.328 Sum_probs=63.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHHh------cCCccEE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQAA------MGTMDGI 110 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~------~~~~d~v 110 (173)
+++++|.|+|++|..+++.+. .|++|+++++++++.+.+.+++ |.+ . ..|-.+.+.+.+. .+++|++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 357888898899999998885 7999999999887766554433 322 1 2344443322222 2479999
Q ss_pred EEcCCCcc------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 111 IDTVSAVH------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 111 id~~g~~~------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
|.+.|... .++.++..++++|+++.+++..
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~ 128 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQS 128 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecc
Confidence 99998531 1234445566677777776543
No 260
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.75 E-value=0.00098 Score=49.65 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=64.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcC-CC---EEeeCCChHHH----HHh---c
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLG-AD---SFLVSRDQDEM----QAA---M 104 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g-~~---~v~~~~~~~~~----~~~---~ 104 (173)
.+++++|.|+ +++|..+++.....|++|+++.+++ ++++.+.+++. .. ...|-.+.+.+ +++ .
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 5789999997 4999999999999999999987643 44555554442 11 12344443322 222 2
Q ss_pred CCccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
+++|+++++.|... .....++.|+++|+++.+++..+
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 57999999887320 01234556667899998886544
No 261
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.74 E-value=0.0011 Score=49.10 Aligned_cols=75 Identities=20% Similarity=0.388 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-E--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (173)
.++++||.|+ |++|...++.+...|++|+++++++++.+.+.+++ +... . .|-.+.+.+.+. .+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 5789999998 99999999999999999999999887766554433 2211 1 233343332222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999985
No 262
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=97.74 E-value=0.0013 Score=44.64 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=71.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
.+|+.....+..+..+..--.|++++|+|. ..+|.-++.++...|++|+...++...++
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~-------------------- 66 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQ-------------------- 66 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence 456666666666777665578999999998 78999999999999999999876543222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.....|+++.++|.+..+... .+++|..++.+|...
T Consensus 67 -~~v~~ADIVvsAtg~~~~i~~~--~ikpGa~Vidvg~~~ 103 (140)
T cd05212 67 -SKVHDADVVVVGSPKPEKVPTE--WIKPGATVINCSPTK 103 (140)
T ss_pred -HHHhhCCEEEEecCCCCccCHH--HcCCCCEEEEcCCCc
Confidence 2234678999999988655544 489999998888543
No 263
>PRK07574 formate dehydrogenase; Provisional
Probab=97.74 E-value=0.00043 Score=54.61 Aligned_cols=90 Identities=20% Similarity=0.245 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL- 120 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~- 120 (173)
.|++|.|+|.|.+|..+++.++..|++|.+.++.....+.... +|.... . .++++....|+++-+++.....
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~-~g~~~~---~---~l~ell~~aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE-LGLTYH---V---SFDSLVSVCDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh-cCceec---C---CHHHHhhcCCEEEEcCCCCHHHH
Confidence 5789999999999999999999999999999987643333333 553211 1 2345566789998888854221
Q ss_pred ----HHHHHhhhcCCEEEEeCC
Q 030694 121 ----MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ----~~~~~~l~~~G~~v~~g~ 138 (173)
...+..|+++..+|.++.
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 256778888888887764
No 264
>PLN03139 formate dehydrogenase; Provisional
Probab=97.73 E-value=0.00031 Score=55.39 Aligned_cols=90 Identities=18% Similarity=0.199 Sum_probs=64.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|++|.|+|.|.+|...++.++..|++|++.+++....+...+ .|.... +.++++....|+++-+++....
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~-~g~~~~------~~l~ell~~sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKE-TGAKFE------EDLDAMLPKCDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhh-cCceec------CCHHHHHhhCCEEEEeCCCCHHHH
Confidence 6889999999999999999999999999999877543333333 553321 1233455678899888875421
Q ss_pred --h-HHHHHhhhcCCEEEEeCC
Q 030694 120 --L-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 --~-~~~~~~l~~~G~~v~~g~ 138 (173)
+ ...+..|+++..+|.++.
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 1 256778888888887764
No 265
>PRK06398 aldose dehydrogenase; Validated
Probab=97.73 E-value=0.00034 Score=52.10 Aligned_cols=70 Identities=14% Similarity=0.188 Sum_probs=49.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH----h---cCCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA----A---MGTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~----~---~~~~d~vid~ 113 (173)
++++++|.|+ |++|...++.+...|++|+++++++.+.. + .- ....|-.+.+.+.+ + .+++|++|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~---~-~~-~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN---D-VD-YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC---c-eE-EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4789999998 89999999999999999999998765432 1 10 11234444433222 2 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 885
No 266
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.73 E-value=0.00086 Score=49.75 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=63.6
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-C---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~g---~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
.+++++|.|++ ++|...++.+...|++|++++++++..+.+++ +.. . ...|-.+.+.+++ + .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQK-LVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHh-hccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999973 89999999999999999999887433333333 321 1 1233344332222 2 2579
Q ss_pred cEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 108 DGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 108 d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
|+++++.|... .....+..++.+|+++.+++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~ 147 (252)
T PRK06079 85 DGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS 147 (252)
T ss_pred CEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc
Confidence 99999987420 12234566667789888875443
No 267
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.72 E-value=0.0007 Score=51.12 Aligned_cols=95 Identities=19% Similarity=0.202 Sum_probs=73.6
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.-++.+++..|++|++..+.... +
T Consensus 138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~---------------------l 196 (285)
T PRK10792 138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKN---------------------L 196 (285)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCC---------------------H
Confidence 468887777888887776567999999998 569999999999999999888654221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++.++|.+..+.. ..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin 233 (285)
T PRK10792 197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN 233 (285)
T ss_pred HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence 2334468999999999865444 668999999999943
No 268
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.71 E-value=0.00029 Score=52.36 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CC---EEeeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD---SFLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~---~v~~~~~~~~~~~~-------~~ 105 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++. .. ...|..+.+.+.+. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4789999998 999999999999999999999998887766655432 11 12243443322222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999999985
No 269
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.71 E-value=0.00028 Score=53.46 Aligned_cols=77 Identities=25% Similarity=0.257 Sum_probs=58.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEee---C-----CCh----HHHHHh---c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLV---S-----RDQ----DEMQAA---M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~---~-----~~~----~~~~~~---~ 104 (173)
++..+++|.|+ .++|++.+..++..|++|+++.++.+|+..+++.++..+.+. + .+. ..++++ .
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~ 110 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE 110 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence 45578999987 899999999999999999999999999999998777322211 1 111 122222 3
Q ss_pred CCccEEEEcCCCc
Q 030694 105 GTMDGIIDTVSAV 117 (173)
Q Consensus 105 ~~~d~vid~~g~~ 117 (173)
+.+|.+|.|.|..
T Consensus 111 ~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 111 GPIDNLFCCAGVA 123 (331)
T ss_pred CCcceEEEecCcc
Confidence 5899999999984
No 270
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.71 E-value=0.0011 Score=49.29 Aligned_cols=99 Identities=19% Similarity=0.259 Sum_probs=64.7
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHCCCeEEEEeCCcch---HHHHHHHcCCCEE--eeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGLG---GLGHVAVKFAKAMGVKVTVISTSPSK---KSEAVERLGADSF--LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~g---~~G~~a~~~~~~~g~~v~~~~~~~~~---~~~~~~~~g~~~v--~~~~~~~~~~~----~---~~~ 106 (173)
++++++|.|++ ++|..+++.....|++|++++++++. .+.+.++++.... .|-.+.+.+++ + .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 57899999973 89999999999999999999887543 3333333443222 23333332222 2 257
Q ss_pred ccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|+++++.|... ..+.++..|+.+|+++.+++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~ 151 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYG 151 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccc
Confidence 999999987420 1234566677778988876543
No 271
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.71 E-value=0.00067 Score=51.27 Aligned_cols=95 Identities=19% Similarity=0.261 Sum_probs=73.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. +.+|.-++.++...|++|++..+... .+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~---------------------~l 195 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR---------------------DL 195 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC---------------------CH
Confidence 467877777777777776578999999998 56699999999999999988543221 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin 232 (285)
T PRK14189 196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN 232 (285)
T ss_pred HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence 2334468999999998865554 679999999999954
No 272
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=97.71 E-value=0.00048 Score=51.92 Aligned_cols=77 Identities=17% Similarity=0.267 Sum_probs=54.9
Q ss_pred HHHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEE
Q 030694 32 SPLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 32 ~~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~v 110 (173)
.++..... ..+++++|+|+|+.+++++..++..|+ +|+++.|+.+|.+.+.+.++... . +.. ....+|++
T Consensus 112 ~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~dlv 182 (272)
T PRK12550 112 KLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEADIL 182 (272)
T ss_pred HHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCCEE
Confidence 34443333 456799999999999999999999998 69999999998888776554211 0 111 12358999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
|+|++..
T Consensus 183 INaTp~G 189 (272)
T PRK12550 183 VNVTPIG 189 (272)
T ss_pred EECCccc
Confidence 9998743
No 273
>PRK06128 oxidoreductase; Provisional
Probab=97.70 E-value=0.0013 Score=50.15 Aligned_cols=99 Identities=14% Similarity=0.195 Sum_probs=63.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHH---HcCCCEE---eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVE---RLGADSF---LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~---~~g~~~v---~~~~~~~~~~~~-------~~ 105 (173)
.++++||.|+ |++|..+++.+...|++|+++.++.+. .+...+ ..|.... .|-.+.+.+++. .+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 4689999998 999999999999999999888765332 222221 1343221 233443332222 34
Q ss_pred CccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|.+.|... ..+.+++.|+++|+++.+++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 8999999998520 1224445566788999887654
No 274
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00068 Score=51.73 Aligned_cols=76 Identities=25% Similarity=0.290 Sum_probs=52.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCC-E--EeeCCChHHHH----Hh---c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQ----AA---M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~----~~---~ 104 (173)
..+++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. . ..|-.+.+.++ ++ .
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 36789999998 99999999999889999999999877655443322 111 1 22434433222 22 2
Q ss_pred CCccEEEEcCCC
Q 030694 105 GTMDGIIDTVSA 116 (173)
Q Consensus 105 ~~~d~vid~~g~ 116 (173)
+++|++|.+.|.
T Consensus 94 ~~iD~li~nAg~ 105 (306)
T PRK06197 94 PRIDLLINNAGV 105 (306)
T ss_pred CCCCEEEECCcc
Confidence 479999999984
No 275
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.69 E-value=0.00099 Score=50.10 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=64.6
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCc---chHHHHHHHcCCCE--EeeCCChHHHHH----h---cC
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSP---SKKSEAVERLGADS--FLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~---~~~~~~~~~~g~~~--v~~~~~~~~~~~----~---~~ 105 (173)
-.+++++|.|+ +++|+..++.+...|++|+++.+++ ++.+.+.++++... ..|-.+.+.+++ + .+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 35789999987 5899999999999999999887763 34444444355322 234334332222 2 24
Q ss_pred CccEEEEcCCCcc-----------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH-----------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|+++++.|... ....++..++.+|+++.+++..
T Consensus 88 ~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~ 151 (272)
T PRK08159 88 KLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYG 151 (272)
T ss_pred CCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccc
Confidence 7999999987420 1223455666779988887543
No 276
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.69 E-value=0.0013 Score=48.72 Aligned_cols=74 Identities=18% Similarity=0.245 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hH-HHHHHHcCCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KK-SEAVERLGADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~-~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ +++|..+++.+...|++|+++++++. +. +.+++ .+.+. ..|-.+.+.+++. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 89999999999999999998887543 21 22222 44321 2344444433332 25799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
+++.+.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999885
No 277
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00047 Score=51.00 Aligned_cols=74 Identities=14% Similarity=0.094 Sum_probs=53.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCChHHHHHhc-CCccEEEEcC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAAM-GTMDGIIDTV 114 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~~-~~~d~vid~~ 114 (173)
+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+.. ...|..+.+.+.+.. +++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 468999998 9999999999999999999999987766555442 2221 123555554444433 4899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 84
No 278
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=97.67 E-value=0.00041 Score=50.45 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=61.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----------------EeeCCChHHHHHh
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----------------FLVSRDQDEMQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----------------v~~~~~~~~~~~~ 103 (173)
.++.++|+.|+| .|.-+..++. .|++|++++.++.-.+.+.++.+... ++..+-.+.-...
T Consensus 33 ~~~~rvLd~GCG-~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~ 110 (213)
T TIGR03840 33 PAGARVFVPLCG-KSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD 110 (213)
T ss_pred CCCCeEEEeCCC-chhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence 567899999998 5777777765 89999999999998877544333211 0000000110111
Q ss_pred cCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEEeCC
Q 030694 104 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 104 ~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.+.+|.++|+..-- ..+..+.+.|+|||+++..+.
T Consensus 111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 24689999976421 236688899999998666653
No 279
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.67 E-value=0.00072 Score=51.05 Aligned_cols=95 Identities=15% Similarity=0.231 Sum_probs=73.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|+++.|+|. |.+|.-++.++...|++|++.-.... ..
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~---------------------~l 195 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR---------------------NL 195 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC---------------------CH
Confidence 467777777777777776578999999998 89999999999999999998732211 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+...+ +++|..++.+|..
T Consensus 196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin 232 (284)
T PRK14179 196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMN 232 (284)
T ss_pred HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEecce
Confidence 233446899999999997666654 9999999999854
No 280
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=97.67 E-value=0.00062 Score=49.66 Aligned_cols=92 Identities=15% Similarity=0.044 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.++.+|||+|+|.++.-=++.+...|++|+++...-. .+..+.+ .|.-..+. .. +......++++||-|+..+.
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~-~~~i~~~~-r~--~~~~dl~g~~LViaATdD~~- 97 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKK-YGNLKLIK-GN--YDKEFIKDKHLIVIATDDEK- 97 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHh-CCCEEEEe-CC--CChHHhCCCcEEEECCCCHH-
Confidence 3578999999999998888888889999999987543 2333333 34322322 11 11122358999999999985
Q ss_pred hHHHHHhh-hcCCEEEEeC
Q 030694 120 LMPLIGLL-KSQGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l-~~~G~~v~~g 137 (173)
++..+... +..+.++...
T Consensus 98 vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 98 LNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHHcCCeEEEc
Confidence 55555444 4446655554
No 281
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00038 Score=51.56 Aligned_cols=75 Identities=12% Similarity=0.215 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+++ +.. ...|-.+.+.+.+. .+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999988776665433 322 12344444333222 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999885
No 282
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.66 E-value=0.00082 Score=50.07 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=63.2
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcc------hHHHHHHHcCCCE--EeeCCChHHHHH----h---
Q 030694 42 PGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPS------KKSEAVERLGADS--FLVSRDQDEMQA----A--- 103 (173)
Q Consensus 42 ~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~------~~~~~~~~~g~~~--v~~~~~~~~~~~----~--- 103 (173)
.+++++|.|+ +++|+..++.+...|++|+++.++.+ ..+.+.+..+... ..|-.+.+.+++ +
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 4789999996 48999999999999999988764332 2333333222111 234444433322 2
Q ss_pred cCCccEEEEcCCCc-------c----------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 104 MGTMDGIIDTVSAV-------H----------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 104 ~~~~d~vid~~g~~-------~----------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
.+++|+++++.|.. . ..+.+++.|+++|+++.+++..+
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 25799999999842 0 12345667777899998876443
No 283
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00039 Score=51.49 Aligned_cols=76 Identities=26% Similarity=0.336 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---C-CCEE--eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---G-ADSF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g-~~~v--~~~~~~~~~~~~-------~~~ 106 (173)
..+++++|.|+ |.+|..+++.+...|++|+++.+++++++.+...+ + ...+ .|-.+.+.+.+. .++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 45799999998 99999999999999999999999988876665432 2 1112 233333322222 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 284
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.66 E-value=0.00063 Score=50.63 Aligned_cols=76 Identities=20% Similarity=0.344 Sum_probs=54.4
Q ss_pred CCCCEEEEEcC-C-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCCEE----eeCCChHHHHHh-------
Q 030694 41 KPGMHVGVVGL-G-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGADSF----LVSRDQDEMQAA------- 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~------- 103 (173)
.++++++|.|+ | ++|..+++.+...|++|+++++++++.+...+. ++...+ .|..+.+.+++.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 45789999997 6 799999999999999999999988776655442 342222 244444333222
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|++|.+.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 2579999999985
No 285
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.66 E-value=0.0011 Score=49.99 Aligned_cols=94 Identities=16% Similarity=0.198 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcCC-hHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGLG-GLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~g-~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++|+|+|.| .+|.-++.++...|++|++.-.... .+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~---------------------~l 194 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTK---------------------DL 194 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcH---------------------HH
Confidence 4678877777778777665689999999985 9999999999999999988743221 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|.
T Consensus 195 ~~~~~~ADIvV~AvG~p~~i~~--~~vk~GavVIDvGi 230 (285)
T PRK14191 195 SFYTQNADIVCVGVGKPDLIKA--SMVKKGAVVVDIGI 230 (285)
T ss_pred HHHHHhCCEEEEecCCCCcCCH--HHcCCCcEEEEeec
Confidence 2334468999999999865543 35799999999995
No 286
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=97.66 E-value=0.00025 Score=57.52 Aligned_cols=75 Identities=21% Similarity=0.359 Sum_probs=54.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCCh-H-
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRDQ-D- 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~~-~- 98 (173)
.+++|+|+|+|+.|+.++..++..|.+|+++++.+. ..+.+++ +|.+..++.... +
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTA-MGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHH-CCCEEECCCEeCCcc
Confidence 578999999999999999999999999999987642 3455555 786654443211 1
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 030694 99 EMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~ 117 (173)
...+...++|.+|.++|..
T Consensus 219 ~~~~~~~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLEDYDAVFLGVGTY 237 (467)
T ss_pred CHHHHHhcCCEEEEEeCCC
Confidence 1222334799999999985
No 287
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=97.65 E-value=0.0015 Score=48.36 Aligned_cols=99 Identities=16% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-CCCEE-eeCCC-hHHHHHhc-CCccEEEEcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-GADSF-LVSRD-QDEMQAAM-GTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-g~~~v-~~~~~-~~~~~~~~-~~~d~vid~~g 115 (173)
..+.+++|+|+ |.+|..+++.+...|++|+++.++.++........ +...+ .|..+ ...+.+.. .++|++|.+.|
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g 94 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG 94 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence 34689999998 99999999998889999999999877654332211 12211 24433 23333334 48999999887
Q ss_pred Ccc-------------chHHHHHhhhcC--CEEEEeCCC
Q 030694 116 AVH-------------PLMPLIGLLKSQ--GKLVLLGAP 139 (173)
Q Consensus 116 ~~~-------------~~~~~~~~l~~~--G~~v~~g~~ 139 (173)
... ....+++.++.. ++++.++..
T Consensus 95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 531 123444545433 588887754
No 288
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=97.65 E-value=0.00063 Score=54.13 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC--CC-EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG--AD-SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g--~~-~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
++++++|.|+ |++|...++.....|++|+++++++++.+...+..+ .. ...|-.+.+.+.+..+++|++|.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 5789999998 999999999988899999999988766543322112 11 123555556566666789999998875
No 289
>PRK05717 oxidoreductase; Validated
Probab=97.65 E-value=0.0006 Score=50.53 Aligned_cols=76 Identities=18% Similarity=0.309 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHH----HHh---cCCccE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEM----QAA---MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~----~~~---~~~~d~ 109 (173)
.++++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.++... ..|-.+.+.+ +++ .+++|+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 35789999998 999999999999999999999988776665554455321 2333443332 222 246999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 88 li~~ag~ 94 (255)
T PRK05717 88 LVCNAAI 94 (255)
T ss_pred EEECCCc
Confidence 9999985
No 290
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=97.64 E-value=0.00057 Score=52.91 Aligned_cols=94 Identities=17% Similarity=0.274 Sum_probs=65.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..+.+.+..+. ..+. +|+++.++.+|.+.+.+.+ |.. +.... ..++...+.|+|+.|+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~---~~~~av~~aDiVvtaT 202 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAAT---DPRAAMSGADIIVTTT 202 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeC---CHHHHhccCCEEEEec
Confidence 45679999999999988887776 4675 8999999999877776544 322 22222 2233445899999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+....+- ....++++-.+..+|..
T Consensus 203 ~s~~p~i-~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 203 PSETPIL-HAEWLEPGQHVTAMGSD 226 (326)
T ss_pred CCCCcEe-cHHHcCCCcEEEeeCCC
Confidence 8763211 12357888888888854
No 291
>PRK12747 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.0012 Score=48.78 Aligned_cols=100 Identities=15% Similarity=0.213 Sum_probs=62.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHc---CCCEE---eeCCChH----HHHHh------
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERL---GADSF---LVSRDQD----EMQAA------ 103 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~---g~~~v---~~~~~~~----~~~~~------ 103 (173)
.+++++|.|+ |++|..+++.+...|++|++.. +++++.+....++ +.... .|-.+.+ ..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4789999998 8999999999999999998875 4445444333222 32211 1222221 11111
Q ss_pred -c--CCccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 104 -M--GTMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 104 -~--~~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
. +++|+++.+.|... ....+++.+++.|+++.+++..+
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 1 27999999988420 12235566667799999986654
No 292
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=97.63 E-value=0.00077 Score=51.05 Aligned_cols=111 Identities=17% Similarity=0.232 Sum_probs=74.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----C---CEEeeCCChHH-HHHh----cC-C
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----A---DSFLVSRDQDE-MQAA----MG-T 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~---~~v~~~~~~~~-~~~~----~~-~ 106 (173)
+-|+..+|.|+ .++|...+.-+..+|.+|+.+.|+++|++..+++.. . ..++|...++. .+.+ .+ .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 34788999999 799988777777799999999999999988877554 1 12456655442 2222 22 5
Q ss_pred ccEEEEcCCCcc---------------------------chHHHHHhh--hcCCEEEEeCCCCCCcccCccccc
Q 030694 107 MDGIIDTVSAVH---------------------------PLMPLIGLL--KSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 107 ~d~vid~~g~~~---------------------------~~~~~~~~l--~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
+-+.++++|-.. ..+..+..| ++.|.++.+|+..+-.+++....+
T Consensus 127 VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~y 200 (312)
T KOG1014|consen 127 VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVY 200 (312)
T ss_pred eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHH
Confidence 777889998642 011222222 355899999988876666654444
No 293
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0016 Score=48.96 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCC--C-E--EeeCCChHHHHH---h---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGA--D-S--FLVSRDQDEMQA---A---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~--~-~--v~~~~~~~~~~~---~---~~~~ 107 (173)
+++++|.|+ |.+|...++.+...|++|+++++++++.+.+.+. .+. . . ..|..+.+.++. . .+++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 578999998 9999999999999999999999988776555432 121 1 1 234444433322 2 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 294
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.63 E-value=0.00024 Score=59.78 Aligned_cols=75 Identities=20% Similarity=0.266 Sum_probs=55.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCC--hH
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRD--QD 98 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~~ 98 (173)
.+++|+|+|+|+.|+.++..++..|.+|+++++.+. +.+.+++ +|.+..++... .-
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTA-MGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHH-CCeEEEcCCccCCcC
Confidence 489999999999999999999999999999987763 3455555 77665544321 11
Q ss_pred HHHHhcCCccEEEEcCCCc
Q 030694 99 EMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~ 117 (173)
.+.++..++|.+|.++|..
T Consensus 388 ~~~~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhcCCEEEEeCCCC
Confidence 2233445899999999974
No 295
>PRK06179 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.00073 Score=50.48 Aligned_cols=72 Identities=22% Similarity=0.312 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHh-------cCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.. .+.. ...|..+.+.+++. .+++|++|.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3568999998 9999999999999999999999987654322 1222 23344454433332 247999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9986
No 296
>PRK06194 hypothetical protein; Provisional
Probab=97.63 E-value=0.00048 Score=51.94 Aligned_cols=76 Identities=20% Similarity=0.334 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.++++||.|+ |++|..+++.+...|++|++++++.++++...+.+ +... ..|-.+.+.+.+. .+++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999998 99999999999999999999999877666554433 3221 1233343333322 2478
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999863
No 297
>PRK13243 glyoxylate reductase; Reviewed
Probab=97.63 E-value=0.00066 Score=52.70 Aligned_cols=88 Identities=23% Similarity=0.367 Sum_probs=63.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.+++.+.. .... .+... . ...++....|+++-+++...
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~-~~~~~----~---~l~ell~~aDiV~l~lP~t~~T~ 219 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPE-AEKE-LGAEY----R---PLEELLRESDFVSLHVPLTKETY 219 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChh-hHHH-cCCEe----c---CHHHHHhhCCEEEEeCCCChHHh
Confidence 57899999999999999999999999999999875432 2222 44321 1 23344557889988887542
Q ss_pred -ch-HHHHHhhhcCCEEEEeCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~ 138 (173)
.+ ...+..|+++..++.++.
T Consensus 220 ~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 220 HMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred hccCHHHHhcCCCCeEEEECcC
Confidence 12 366778888888887764
No 298
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.63 E-value=0.0004 Score=53.34 Aligned_cols=75 Identities=23% Similarity=0.216 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----C-CC-E--EeeCCChHHHHH----h---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----G-AD-S--FLVSRDQDEMQA----A---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g-~~-~--v~~~~~~~~~~~----~---~~ 105 (173)
.+++++|.|+ +++|..+++.+...|++|+++++++++.+.+.+++ + .. . ..|-.+.+.+++ + .+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4789999998 89999999999999999999999988766554432 1 11 1 234444333222 2 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|++.|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999999885
No 299
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.63 E-value=0.00062 Score=49.07 Aligned_cols=77 Identities=25% Similarity=0.457 Sum_probs=51.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------chHHHHHHH---cCCC-EE--eeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP-------------------SKKSEAVER---LGAD-SF--LVSR 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~-------------------~~~~~~~~~---~g~~-~v--~~~~ 95 (173)
.+.+|+|+|+|++|..+++.+...|. ++++++.+. .|.+.+.+. +... .+ ++..
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~ 99 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKER 99 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhc
Confidence 46889999999999999999999998 899998772 222222222 2221 11 1111
Q ss_pred -ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 -~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+.+...+...++|++|+|+.+..
T Consensus 100 i~~~~~~~~~~~~D~Vi~~~d~~~ 123 (202)
T TIGR02356 100 VTAENLELLINNVDLVLDCTDNFA 123 (202)
T ss_pred CCHHHHHHHHhCCCEEEECCCCHH
Confidence 12334445568999999998874
No 300
>PLN02253 xanthoxin dehydrogenase
Probab=97.62 E-value=0.00065 Score=51.06 Aligned_cols=75 Identities=21% Similarity=0.335 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.++. . ...|-.+.+.+.+. .+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999999989999999999887766555544432 1 12344444433332 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999875
No 301
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.0017 Score=48.15 Aligned_cols=76 Identities=18% Similarity=0.287 Sum_probs=52.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCe-EEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVK-VTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~-v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
..+++++|.|+ |++|..+++.+...|++ |+++++++++....... .+... ..|..+.+.+.+. .+
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35788999998 99999999999999998 99999887655533221 34321 2344444433322 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999985
No 302
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.62 E-value=0.0026 Score=48.38 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=74.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-C---CCEEeeCCChHHHHHh-------c--CC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-G---ADSFLVSRDQDEMQAA-------M--GT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-g---~~~v~~~~~~~~~~~~-------~--~~ 106 (173)
.+++.|+|.|+ .+.|..++.-+...|++|++.+.+++..+.++... . .+..+|-..++.+++. . .+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 45677999999 89999999999999999999999888878777744 2 1224455555433332 2 27
Q ss_pred ccEEEEcCCCc--------------------------cchHHHHHhhhc-CCEEEEeCCCCCCcccC
Q 030694 107 MDGIIDTVSAV--------------------------HPLMPLIGLLKS-QGKLVLLGAPEKPLELP 146 (173)
Q Consensus 107 ~d~vid~~g~~--------------------------~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~ 146 (173)
.--++++.|.. ......+..+++ .||+|.+++..|..+.|
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p 173 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALP 173 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCc
Confidence 88889999832 112344555654 49999999887765553
No 303
>PLN02928 oxidoreductase family protein
Probab=97.61 E-value=0.00058 Score=53.28 Aligned_cols=96 Identities=19% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CCEEeeC-CChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----ADSFLVS-RDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~~v~~~-~~~~~~~~~~~~~d~vid~~ 114 (173)
-.|+++.|+|.|.+|..+++.++..|++|++.+++..+... .. ++ .....+. .....+.++....|+++.++
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l 234 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPE-DG-LLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC 234 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhh-hh-hccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence 35889999999999999999999999999999886432111 10 10 0000000 01223445566789999888
Q ss_pred CCcc----c-hHHHHHhhhcCCEEEEeCC
Q 030694 115 SAVH----P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 115 g~~~----~-~~~~~~~l~~~G~~v~~g~ 138 (173)
+... . -...+..|+++..+|.++.
T Consensus 235 Plt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 235 TLTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CCChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 7532 1 2367788899888888863
No 304
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.61 E-value=0.0011 Score=49.85 Aligned_cols=95 Identities=16% Similarity=0.231 Sum_probs=73.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.+....|++|++..+... .+
T Consensus 131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~---------------------~L 189 (279)
T PRK14178 131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE---------------------NL 189 (279)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh---------------------HH
Confidence 467777777777877776578999999998 58999999999999999988776532 12
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|++|.++|.+..+...+ +++|..++.+|..
T Consensus 190 ~~~~~~ADIvI~Avgk~~lv~~~~--vk~GavVIDVgi~ 226 (279)
T PRK14178 190 KAELRQADILVSAAGKAGFITPDM--VKPGATVIDVGIN 226 (279)
T ss_pred HHHHhhCCEEEECCCcccccCHHH--cCCCcEEEEeecc
Confidence 233446899999999775555444 7999999999965
No 305
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.61 E-value=0.0016 Score=48.32 Aligned_cols=74 Identities=28% Similarity=0.341 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++.. ..+.+++ +.+ ...|-.+.+.+.+ + .+++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 999999999999999999999987532 2222212 322 1234444332222 2 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999974
No 306
>PRK04457 spermidine synthase; Provisional
Probab=97.60 E-value=0.0023 Score=48.05 Aligned_cols=95 Identities=18% Similarity=0.225 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCC----C--EEeeCCChHHHHHhcCCccEEE-E
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGA----D--SFLVSRDQDEMQAAMGTMDGII-D 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~----~--~v~~~~~~~~~~~~~~~~d~vi-d 112 (173)
.+.++||++|+|+ |..+..+++.. +.++++++.+++-.+.+++.++. . .++..+..+.+.+..+.+|+|+ |
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D 143 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD 143 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence 4568899999873 66777777766 45999999999988888886552 1 2344443455555556899997 3
Q ss_pred cCCC---------ccchHHHHHhhhcCCEEEEe
Q 030694 113 TVSA---------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 113 ~~g~---------~~~~~~~~~~l~~~G~~v~~ 136 (173)
.... ...+..+.++|+|+|+++..
T Consensus 144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 3221 12456788999999998873
No 307
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00059 Score=50.51 Aligned_cols=75 Identities=24% Similarity=0.333 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE-E--eeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS-F--LVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.+. . .|-.+.+.+.+ + .+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999998 89999999999999999999999988776665433 3221 1 23334332222 2 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999985
No 308
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.59 E-value=0.0017 Score=48.54 Aligned_cols=75 Identities=15% Similarity=0.244 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHCCCeEEEEeCCcc---hHHHHHHHcCCCE--EeeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-G--GLGHVAVKFAKAMGVKVTVISTSPS---KKSEAVERLGADS--FLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g--~~G~~a~~~~~~~g~~v~~~~~~~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~-------~~~ 106 (173)
++++++|.|+ + ++|.+.++.+...|++|++.++++. ..+.+....+... ..|-.+.+.+++. .++
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 5789999997 3 7999999999999999998887632 2233332223211 2344444333322 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|++.|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999999983
No 309
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=97.59 E-value=0.0012 Score=47.05 Aligned_cols=95 Identities=24% Similarity=0.258 Sum_probs=60.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH-CCCeEEEEeCCcchHHHHHHH---cCCCE--EeeCCChHHHHHhcCCccEEEEc
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKA-MGVKVTVISTSPSKKSEAVER---LGADS--FLVSRDQDEMQAAMGTMDGIIDT 113 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~-~g~~v~~~~~~~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~~~~~d~vid~ 113 (173)
++++.+|+-+|+| .|..+..+++. .+++|++++.+++..+.+++. .+.+. ++..+..+ ... .+.+|+++..
T Consensus 43 l~~g~~VLDiGcG-tG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~-~~~-~~~fDlV~~~ 119 (187)
T PRK00107 43 LPGGERVLDVGSG-AGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEE-FGQ-EEKFDVVTSR 119 (187)
T ss_pred cCCCCeEEEEcCC-CCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhh-CCC-CCCccEEEEc
Confidence 3558999999986 34444445543 457999999999877776653 33321 22211111 111 3479999864
Q ss_pred CCCc--cchHHHHHhhhcCCEEEEeC
Q 030694 114 VSAV--HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 114 ~g~~--~~~~~~~~~l~~~G~~v~~g 137 (173)
.... ..+..+.+.|+|||+++.+-
T Consensus 120 ~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 120 AVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred cccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 3322 34667889999999998874
No 310
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.00044 Score=51.17 Aligned_cols=76 Identities=21% Similarity=0.311 Sum_probs=54.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH-------hcCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~-------~~~~ 106 (173)
-++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ...|-.+.+.+.. ..++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR 82 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 99999999999999999999999887766655433 221 2234344333222 1257
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (258)
T PRK07890 83 VDALVNNAFR 92 (258)
T ss_pred ccEEEECCcc
Confidence 9999999975
No 311
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=97.59 E-value=0.00049 Score=45.84 Aligned_cols=89 Identities=19% Similarity=0.337 Sum_probs=57.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEe-CCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVIS-TSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~-~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
.+.-+|-|+|+|.+|..+....+..|..|..+. ++.+..+.+...++...+.+ ..++....|++|-++++. .
T Consensus 8 ~~~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~------~~~~~~~aDlv~iavpDd-a 80 (127)
T PF10727_consen 8 AARLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILD------LEEILRDADLVFIAVPDD-A 80 (127)
T ss_dssp ----EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----------TTGGGCC-SEEEE-S-CC-H
T ss_pred CCccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccc------cccccccCCEEEEEechH-H
Confidence 346789999999999999999999999988875 55556666666555543432 223456899999999999 5
Q ss_pred hHHHHHhhhcC-----CEEEEe
Q 030694 120 LMPLIGLLKSQ-----GKLVLL 136 (173)
Q Consensus 120 ~~~~~~~l~~~-----G~~v~~ 136 (173)
+...+..|+.. |+++.-
T Consensus 81 I~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 81 IAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp HHHHHHHHHCC--S-TT-EEEE
T ss_pred HHHHHHHHHHhccCCCCcEEEE
Confidence 88888888765 665544
No 312
>PRK07985 oxidoreductase; Provisional
Probab=97.59 E-value=0.0015 Score=49.71 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=63.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc--chHHHHHH---HcCCCE---EeeCCChHHHHHh-------c
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP--SKKSEAVE---RLGADS---FLVSRDQDEMQAA-------M 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~--~~~~~~~~---~~g~~~---v~~~~~~~~~~~~-------~ 104 (173)
-++++++|.|+ |++|...++.+...|++|++..++. ++.+.+.+ ..+... ..|-.+.+.+.+. .
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35689999998 9999999999999999999887543 23333332 123221 2344444332222 3
Q ss_pred CCccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 105 GTMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 105 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+++|+++.+.|... .+..++..|+.+|+++.+++..
T Consensus 127 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~ 188 (294)
T PRK07985 127 GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQ 188 (294)
T ss_pred CCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCch
Confidence 47999999887420 1234445566789999887644
No 313
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.59 E-value=0.0021 Score=48.76 Aligned_cols=100 Identities=15% Similarity=0.194 Sum_probs=63.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
.++++++|.|+ |++|..+++.+...|++|+++.+++++ .+...+. .+... ..|-.+.+.+.+. .+
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 999999999999899999999887542 2222221 23222 1233333332222 24
Q ss_pred CccEEEEcCCCcc--------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 106 TMDGIIDTVSAVH--------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 106 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
++|++|.+.|... ....++..++++|+++.+++..
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~ 184 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSIT 184 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 7999999987520 1123345566778999888644
No 314
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.59 E-value=0.00049 Score=52.95 Aligned_cols=74 Identities=20% Similarity=0.247 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+. .. . ..|-.+.+.+++. .+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4788999998 999999999999999999999999888776655442 11 1 1244443322221 2369
Q ss_pred cEEEEcCC
Q 030694 108 DGIIDTVS 115 (173)
Q Consensus 108 d~vid~~g 115 (173)
|++|++.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999988
No 315
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.58 E-value=0.00085 Score=49.35 Aligned_cols=75 Identities=23% Similarity=0.441 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHH----Hh---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQ----AA---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~----~~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|-.+.+... .+ .+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999988776655442 23321 23333333222 22 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.+|.+.|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999884
No 316
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.58 E-value=0.00056 Score=47.18 Aligned_cols=74 Identities=24% Similarity=0.381 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCC--cchHHHHHHHc---CCCE-E--eeCCChHHHHH-------hcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTS--PSKKSEAVERL---GADS-F--LVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~--~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~-------~~~~ 106 (173)
++++|+|+ +++|...++.....|. +|+.+.++ .++.+.+.+.+ +... + .|-.+.+.+++ ..+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899998 9999999998888877 77888887 45555443323 4221 2 23333332222 2358
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999999975
No 317
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.58 E-value=0.00073 Score=49.94 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC-C---EEeeCCChHHHHH----h---cCCccE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA-D---SFLVSRDQDEMQA----A---MGTMDG 109 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~-~---~v~~~~~~~~~~~----~---~~~~d~ 109 (173)
++++++|.|+ |++|...++.+...|++|++++++++..+...+ ... . ...|-.+.+.+.+ + .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQ-LLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999998 999999999999999999999998765444444 322 1 1234344332222 1 247999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999985
No 318
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=97.58 E-value=0.0013 Score=41.31 Aligned_cols=86 Identities=21% Similarity=0.363 Sum_probs=60.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCC---CeEEEE-eCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMG---VKVTVI-STSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g---~~v~~~-~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
++.++|+|.+|.+.++-....| .+|+.. .+++++.+.+.++++..... .+..+ ..+..|++|-|+.... +
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~----~~~~advvilav~p~~-~ 74 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEE----AAQEADVVILAVKPQQ-L 74 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHH----HHHHTSEEEE-S-GGG-H
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHH----hhccCCEEEEEECHHH-H
Confidence 5778899999999999999999 789955 99999999988867754332 11122 2336899999999884 5
Q ss_pred HHHHHhh---hcCCEEEEe
Q 030694 121 MPLIGLL---KSQGKLVLL 136 (173)
Q Consensus 121 ~~~~~~l---~~~G~~v~~ 136 (173)
...+..+ .++..++.+
T Consensus 75 ~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 75 PEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHhhccCCCEEEEe
Confidence 5555444 455666654
No 319
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.58 E-value=0.0016 Score=50.16 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=71.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC----CE----EeeCCChHHHHH-------hc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA----DS----FLVSRDQDEMQA-------AM 104 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~----~~----v~~~~~~~~~~~-------~~ 104 (173)
.++.+++|.|+ +++|..+++.+...|++|++.+|+.++.+.+.+++.. .. ..|-++.+.+.. ..
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 45788999999 8999999999999999999999999887777665432 21 223333322222 23
Q ss_pred CCccEEEEcCCCcc-----------------------chHHHHHhhhcC--CEEEEeCCCCC
Q 030694 105 GTMDGIIDTVSAVH-----------------------PLMPLIGLLKSQ--GKLVLLGAPEK 141 (173)
Q Consensus 105 ~~~d~vid~~g~~~-----------------------~~~~~~~~l~~~--G~~v~~g~~~~ 141 (173)
.+.|+.|++.|.-. ....++..|+.. +|+|.+++..+
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 48999999988631 133555666655 79999986543
No 320
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.58 E-value=0.00066 Score=52.52 Aligned_cols=91 Identities=20% Similarity=0.226 Sum_probs=67.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-----------EeeCCChHHHHHhcCCccEEE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-----------FLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-----------v~~~~~~~~~~~~~~~~d~vi 111 (173)
..+|.|+|+|.+|...+..+...|.+|+++++++++.+.+.+ .+... +... +...+.....|++|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~-~~~~~~~~~g~~~~~~~~~~---~~~~e~~~~aD~Vi 79 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAA-ERENREYLPGVALPAELYPT---ADPEEALAGADFAV 79 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-hCcccccCCCCcCCCCeEEe---CCHHHHHcCCCEEE
Confidence 457999999999999999988899999999999888777765 32100 1111 11223345799999
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEeCC
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
-|+.... +...+..++++-.++.+..
T Consensus 80 ~~v~~~~-~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 80 VAVPSKA-LRETLAGLPRALGYVSCAK 105 (328)
T ss_pred EECchHH-HHHHHHhcCcCCEEEEEee
Confidence 9999984 7888888888877776643
No 321
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.00061 Score=50.39 Aligned_cols=74 Identities=20% Similarity=0.308 Sum_probs=52.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EEe--eCCChHHHHH----h---cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SFL--VSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~----~---~~~~d 108 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+ +.. ..+ |-.+.+.+++ + .+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 478999998 89999999999999999999999887766554433 211 222 4344433322 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 322
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=97.57 E-value=0.00082 Score=51.70 Aligned_cols=89 Identities=20% Similarity=0.317 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
..+++|.|+|.|.+|...++.++..|++|+++++..++.. +..... ....+.+...+.|+++.+++.....
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T 204 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET 204 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence 3678999999999999999999999999999987654321 111111 1123445566788888888864221
Q ss_pred -----HHHHHhhhcCCEEEEeCC
Q 030694 121 -----MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 -----~~~~~~l~~~G~~v~~g~ 138 (173)
...+..|+++..+|.+|-
T Consensus 205 ~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 205 VGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HHHhHHHHHhcCCCCcEEEECCC
Confidence 246677888888877764
No 323
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=97.57 E-value=0.0017 Score=49.94 Aligned_cols=74 Identities=26% Similarity=0.279 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC--C--EE--eeCCChHHH----HHh---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA--D--SF--LVSRDQDEM----QAA---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~--~--~v--~~~~~~~~~----~~~---~~~~ 107 (173)
+++++|.|+ +++|..+++.+...| ++|+++++++++.+.+.+.++. . .. .|-.+.+.+ +++ .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 578999998 899999999888899 8999999998877766554531 1 11 344443322 222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999874
No 324
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=97.57 E-value=0.00055 Score=50.10 Aligned_cols=92 Identities=29% Similarity=0.385 Sum_probs=63.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCEEeeCCChH--HHHHhcCCccEEE-----
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADSFLVSRDQD--EMQAAMGTMDGII----- 111 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~v~~~~~~~--~~~~~~~~~d~vi----- 111 (173)
+|.+||=+|+|+ |++...+|+ .|++|++++-+++-.+.++.. -|.. +||.... .+.+..+.||+|+
T Consensus 59 ~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEVl 134 (243)
T COG2227 59 PGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEVL 134 (243)
T ss_pred CCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhHH
Confidence 789999999952 555555555 889999999999988888752 2222 4555432 2222335899996
Q ss_pred EcCCCcc-chHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAVH-PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~~-~~~~~~~~l~~~G~~v~~g 137 (173)
+-+..+. .+..+.+.++|+|.+...-
T Consensus 135 EHv~dp~~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 135 EHVPDPESFLRACAKLVKPGGILFLST 161 (243)
T ss_pred HccCCHHHHHHHHHHHcCCCcEEEEec
Confidence 4566553 3557888999999987654
No 325
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.56 E-value=0.0028 Score=46.91 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCE-EeeCCChHHHHHh-------cCCccEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADS-FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~-v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
.+++++|.|+ |++|...++.+...|++|++..++.+ +.+.+.. .+... ..|-.+.+.+.+. .+++|++|
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE-KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh-CCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999998 99999999999999999988765443 3444443 33222 2344444333222 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99875
No 326
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.55 E-value=0.0023 Score=46.75 Aligned_cols=75 Identities=19% Similarity=0.321 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE-E--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~~ 107 (173)
++++++|+|+ |.+|..+++.+...|.+|+++.+++++.+.+... .+... . .|..+.+.+.+. .+++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999998 9999999999989999999999998775544332 23221 1 244443322221 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.++.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999876
No 327
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.55 E-value=0.0019 Score=50.19 Aligned_cols=94 Identities=21% Similarity=0.291 Sum_probs=66.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
-.+++|+|+|+ |.+|..+++.+.. .|. +++.+.++++++..+.++++...+. .+.+...+.|+++.+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l~~aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEALPEADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHHccCCEEEECCcCC
Confidence 46799999999 9999999888864 465 8999999988888876655522221 2334556899999999976
Q ss_pred cchHHHHHhhhcCCEEEEeCCCC
Q 030694 118 HPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 118 ~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..+.---..++++-.++.++.+.
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvPR 249 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYPK 249 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCCC
Confidence 43211123557777888888654
No 328
>PRK07402 precorrin-6B methylase; Provisional
Probab=97.55 E-value=0.0043 Score=44.34 Aligned_cols=102 Identities=15% Similarity=0.105 Sum_probs=63.0
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHH---cCCC--EEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVER---LGAD--SFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~~~~~d~ 109 (173)
.....+++++|+-+|+| .|..+..+++.. +.+|++++.+++..+.++++ ++.. .++..+..+....+...+|.
T Consensus 34 ~~l~~~~~~~VLDiG~G-~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~ 112 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAG-TGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDR 112 (196)
T ss_pred HhcCCCCCCEEEEeCCC-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCE
Confidence 33345788999999875 344555555543 46999999999888877663 3432 23333333333333334455
Q ss_pred EEEcCCC--ccchHHHHHhhhcCCEEEEeCC
Q 030694 110 IIDTVSA--VHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 110 vid~~g~--~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
++-..+. ...+..+.+.|+|||+++....
T Consensus 113 v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 113 VCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred EEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 4432232 2356788899999999887753
No 329
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=97.55 E-value=0.00073 Score=46.68 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=61.4
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-CC----EEeeCC--ChHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-AD----SFLVSR--DQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-~~----~v~~~~--~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|.|+|+|..|.+++..+...|.+|+.+.++++..+.+++.-. .. ..+... ..+.+++...+.|+++-+++..
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs~ 80 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPSQ 80 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-GG
T ss_pred CEEEECcCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccHH
Confidence 5889999999999999999999999999999988888877321 01 111110 0123344556899999999988
Q ss_pred cchHHHHHhhhc---CCEEEEe
Q 030694 118 HPLMPLIGLLKS---QGKLVLL 136 (173)
Q Consensus 118 ~~~~~~~~~l~~---~G~~v~~ 136 (173)
..+..+..+++ .+..+..
T Consensus 81 -~~~~~~~~l~~~l~~~~~ii~ 101 (157)
T PF01210_consen 81 -AHREVLEQLAPYLKKGQIIIS 101 (157)
T ss_dssp -GHHHHHHHHTTTSHTT-EEEE
T ss_pred -HHHHHHHHHhhccCCCCEEEE
Confidence 46777777766 3544444
No 330
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.55 E-value=0.0018 Score=48.97 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=73.3
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
.-.||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|++..+....
T Consensus 142 ~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~--------------------- 200 (287)
T PRK14176 142 GLVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDD--------------------- 200 (287)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCC---------------------
Confidence 3468877777777887776568999999998 569999999999999999887743221
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++.++|.+..+. -..+++|..++.+|..
T Consensus 201 l~~~~~~ADIvv~AvG~p~~i~--~~~vk~gavVIDvGin 238 (287)
T PRK14176 201 LKKYTLDADILVVATGVKHLIK--ADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHHHhhCCEEEEccCCccccC--HHHcCCCcEEEEeccc
Confidence 1223346789999999986553 3468999999999963
No 331
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.54 E-value=0.00075 Score=52.05 Aligned_cols=94 Identities=16% Similarity=0.132 Sum_probs=58.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----------cCCC--EEeeC-CChHHHHHhcCCccE
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----------LGAD--SFLVS-RDQDEMQAAMGTMDG 109 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----------~g~~--~v~~~-~~~~~~~~~~~~~d~ 109 (173)
-++|.|+|+|.+|...++.+...|.+|++.+++++..+.+.+. .+.. ..... .....+.+...+.|+
T Consensus 7 i~~VaVIGaG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aDl 86 (321)
T PRK07066 7 IKTFAAIGSGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADADF 86 (321)
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCCE
Confidence 3689999999999999999999999999999998765544331 1100 00000 000112334468999
Q ss_pred EEEcCCCcc-----chHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAVH-----PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~~-----~~~~~~~~l~~~G~~v~~g 137 (173)
|++++.... .+..+-..++++ .++...
T Consensus 87 ViEavpE~l~vK~~lf~~l~~~~~~~-aIlaSn 118 (321)
T PRK07066 87 IQESAPEREALKLELHERISRAAKPD-AIIASS 118 (321)
T ss_pred EEECCcCCHHHHHHHHHHHHHhCCCC-eEEEEC
Confidence 999999763 233333444444 454443
No 332
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00082 Score=48.87 Aligned_cols=72 Identities=18% Similarity=0.157 Sum_probs=51.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE--EeeCCChHHHHH----hc-CCccEEEEcCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS--FLVSRDQDEMQA----AM-GTMDGIIDTVS 115 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~--v~~~~~~~~~~~----~~-~~~d~vid~~g 115 (173)
++++|.|+ |++|...++.+...|++|+++++++++.+.+.+ ++... ..|-.+.+..++ +. +++|++|.+.|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 57899998 999999999999999999999999887766655 43222 234344333322 22 37999999886
Q ss_pred C
Q 030694 116 A 116 (173)
Q Consensus 116 ~ 116 (173)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 5
No 333
>PRK07069 short chain dehydrogenase; Validated
Probab=97.53 E-value=0.0023 Score=47.09 Aligned_cols=72 Identities=19% Similarity=0.295 Sum_probs=49.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCC-cchHHHHHHHcC----CC----EEeeCCChHHHHH-------hcCCcc
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTS-PSKKSEAVERLG----AD----SFLVSRDQDEMQA-------AMGTMD 108 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~-------~~~~~d 108 (173)
++|.|+ |++|...++.+...|++|++++++ +++.+.+.+.+. .. ...|-.+.+.+++ ..+++|
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 81 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS 81 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence 789998 999999999999999999999987 665555544332 11 1224444433322 235799
Q ss_pred EEEEcCCCc
Q 030694 109 GIIDTVSAV 117 (173)
Q Consensus 109 ~vid~~g~~ 117 (173)
++|.+.|..
T Consensus 82 ~vi~~ag~~ 90 (251)
T PRK07069 82 VLVNNAGVG 90 (251)
T ss_pred EEEECCCcC
Confidence 999998853
No 334
>PRK00811 spermidine synthase; Provisional
Probab=97.53 E-value=0.0024 Score=48.46 Aligned_cols=96 Identities=17% Similarity=0.126 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC----------CEEeeCCChHHHHHhcCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA----------DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~----------~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+..++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. -.++..+...++....+.+|+
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv 153 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV 153 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence 4568999999863 5566666776565 899999999988888774421 123333334455443458999
Q ss_pred EEEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
||.....+ .-+..+.+.|+++|.++...
T Consensus 154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 98654332 12457789999999988754
No 335
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=97.53 E-value=0.00082 Score=49.21 Aligned_cols=70 Identities=23% Similarity=0.362 Sum_probs=55.1
Q ss_pred EEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHcCCCEE-eeCCChHHHHHhcCCccEEEEcCCC
Q 030694 46 VGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGADSF-LVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 46 vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~~~v-~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
|+|+|+ |.+|...++.+...+.+|.+..|++.+ .+.++. .|...+ .|+.+.+.+.+...++|.+|.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~-~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQA-LGAEVVEADYDDPESLVAALKGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHH-TTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhc-ccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence 689998 999999999999999999999998743 455566 787543 3555667777778899999999994
No 336
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=97.53 E-value=0.00075 Score=51.32 Aligned_cols=87 Identities=22% Similarity=0.252 Sum_probs=61.1
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (173)
+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|.|++........
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-~g~~~~---~~---~~~~~~~aDivi~~vp~~~~~~~v~ 73 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-AGAVTA---ET---ARQVTEQADVIFTMVPDSPQVEEVA 73 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHHH
Confidence 3778999999999888888899999999999998888877 664321 11 223345789999999876433333
Q ss_pred ------HHhhhcCCEEEEeCC
Q 030694 124 ------IGLLKSQGKLVLLGA 138 (173)
Q Consensus 124 ------~~~l~~~G~~v~~g~ 138 (173)
+..++++-.++.++.
T Consensus 74 ~~~~~~~~~~~~g~iivd~st 94 (291)
T TIGR01505 74 FGENGIIEGAKPGKTLVDMSS 94 (291)
T ss_pred cCcchHhhcCCCCCEEEECCC
Confidence 234455556665553
No 337
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.0046 Score=46.83 Aligned_cols=76 Identities=26% Similarity=0.342 Sum_probs=51.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc---------chHHHHHHHc---CCCEE---eeCCChHHHH---
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP---------SKKSEAVERL---GADSF---LVSRDQDEMQ--- 101 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~---------~~~~~~~~~~---g~~~v---~~~~~~~~~~--- 101 (173)
.++++++|.|+ +++|...++.+...|++|++++++. ++.+.+.+++ +.... .|-.+.+.+.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 45789999998 8999999999999999999988765 4444443323 32211 2333433222
Q ss_pred -Hh---cCCccEEEEcCCC
Q 030694 102 -AA---MGTMDGIIDTVSA 116 (173)
Q Consensus 102 -~~---~~~~d~vid~~g~ 116 (173)
++ .+++|++|++.|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 22 3589999999885
No 338
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.001 Score=48.72 Aligned_cols=75 Identities=11% Similarity=0.139 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cC-C
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MG-T 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~-~ 106 (173)
++++++|.|+ +++|+..++.+...|++|+++.+++++++.+.++. +.+. ..|-.+.+.+++ + .+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 89999999999999999999999988876654432 4221 234344433322 2 24 7
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999973
No 339
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.52 E-value=0.00038 Score=49.46 Aligned_cols=71 Identities=15% Similarity=0.170 Sum_probs=45.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhc---------------CCccE
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAM---------------GTMDG 109 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~---------------~~~d~ 109 (173)
+|.|+|.|-+|+-++..+...|.+|++++.++++.+.+++ |..++..+.-.+.+++.. ...|+
T Consensus 2 ~I~ViGlGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~--g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 2 KIAVIGLGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNN--GELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp EEEEE--STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHT--TSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred EEEEECCCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhh--ccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 6889999999999999999999999999999999888866 433333222223333221 16999
Q ss_pred EEEcCCCc
Q 030694 110 IIDTVSAV 117 (173)
Q Consensus 110 vid~~g~~ 117 (173)
+|-|++.+
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 99999987
No 340
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.52 E-value=0.002 Score=48.55 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=72.9
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l--------------------- 195 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNL--------------------- 195 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467877777777877776578999999998 7899999999999999998876432222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+... .+++|..++.+|..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~~~--~ik~gavVIDvGin 232 (278)
T PRK14172 196 KEVCKKADILVVAIGRPKFIDEE--YVKEGAIVIDVGTS 232 (278)
T ss_pred HHHHhhCCEEEEcCCCcCccCHH--HcCCCcEEEEeecc
Confidence 22334579999999999755543 48999999999854
No 341
>PRK08017 oxidoreductase; Provisional
Probab=97.52 E-value=0.0011 Score=48.95 Aligned_cols=72 Identities=19% Similarity=0.268 Sum_probs=53.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHH----HHh----cCCccEEEEc
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEM----QAA----MGTMDGIIDT 113 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~----~~~----~~~~d~vid~ 113 (173)
++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+ .+... ..|..+.+.+ +.+ .+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-LGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 57999998 999999999999999999999999988887766 66443 2344443322 222 1468899988
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 774
No 342
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.0007 Score=49.88 Aligned_cols=75 Identities=17% Similarity=0.271 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|.|+ |.+|..+++.+...|++|+.+.++.++.....+.+ +.. .. .|-.+.+.+++. .+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4679999998 99999999988889999999999887666555433 221 11 233444333222 24899
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
.+|.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
No 343
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.51 E-value=0.0024 Score=46.80 Aligned_cols=75 Identities=20% Similarity=0.390 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCCE-E--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GADS-F--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~~-v--~~~~~~~~~~~~-------~~~ 106 (173)
.+++++|.|+ |.+|..++..+...|++|+++ .+++++.+.+.+.+ +... + .|-.+.+.+.+. .++
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999998 999999999888899999998 88877665554422 2211 1 233333332222 237
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998875
No 344
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=97.51 E-value=0.0018 Score=48.34 Aligned_cols=94 Identities=27% Similarity=0.304 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C--EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D--SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++.+||-+|+| .|..+..+++ .|.+|++++.+++..+.+++.. |. . .++..+..+......+.+|+|+...
T Consensus 43 ~~~~~vLDiGcG-~G~~a~~la~-~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~ 120 (255)
T PRK11036 43 PRPLRVLDAGGG-EGQTAIKLAE-LGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA 120 (255)
T ss_pred CCCCEEEEeCCC-chHHHHHHHH-cCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence 456799999987 4666667766 5889999999999888887643 21 1 2222222222122345799998543
Q ss_pred C-----Cc-cchHHHHHhhhcCCEEEEe
Q 030694 115 S-----AV-HPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 115 g-----~~-~~~~~~~~~l~~~G~~v~~ 136 (173)
. .+ ..+..+.+.|+|||+++.+
T Consensus 121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 121 VLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred HHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 2 22 2467888999999998765
No 345
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=97.51 E-value=0.0012 Score=50.27 Aligned_cols=90 Identities=22% Similarity=0.289 Sum_probs=62.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.|+|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|.|++........
T Consensus 3 ~~IgviG~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-~g~~~~---~~---~~e~~~~~d~vi~~vp~~~~~~~v 75 (296)
T PRK11559 3 MKVGFIGLGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-AGAETA---ST---AKAVAEQCDVIITMLPNSPHVKEV 75 (296)
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-CCCeec---CC---HHHHHhcCCEEEEeCCCHHHHHHH
Confidence 36899999999998888888899999999999888887776 664211 11 122345789999999876433333
Q ss_pred -------HHhhhcCCEEEEeCCCC
Q 030694 124 -------IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 -------~~~l~~~G~~v~~g~~~ 140 (173)
...++++-.++.++...
T Consensus 76 ~~~~~~~~~~~~~g~iiid~st~~ 99 (296)
T PRK11559 76 ALGENGIIEGAKPGTVVIDMSSIA 99 (296)
T ss_pred HcCcchHhhcCCCCcEEEECCCCC
Confidence 34455666666665433
No 346
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0012 Score=48.98 Aligned_cols=74 Identities=19% Similarity=0.239 Sum_probs=52.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-----EEeeCCChHHHHH----h---cCCccE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-----SFLVSRDQDEMQA----A---MGTMDG 109 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-----~v~~~~~~~~~~~----~---~~~~d~ 109 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+.+.+... ...|-.+.+.+.+ + .+.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 468999998 99999999999999999999999988877665534311 1234444333322 2 246899
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
++.+.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
No 347
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.003 Score=46.31 Aligned_cols=99 Identities=18% Similarity=0.219 Sum_probs=62.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~ 106 (173)
++++++|+|+ |++|...++.+...|++++.+.++.+ +.+.+.+. .+.. .. .|-.+.+.+.+. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 99999999999999999888776543 22222221 3321 11 233333322222 247
Q ss_pred ccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 107 MDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 107 ~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+|++|.+.|... ....+++.++++|+++.++...
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 142 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSV 142 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeecc
Confidence 999999998521 1223445566778999887543
No 348
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00086 Score=49.38 Aligned_cols=75 Identities=20% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~-------~~~~~ 107 (173)
.+++++|.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|-.+.+.+.+ ..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4688999998 99999999999999999999999877655544322 211 1 234344332222 22479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 349
>PRK08643 acetoin reductase; Validated
Probab=97.50 E-value=0.00088 Score=49.59 Aligned_cols=74 Identities=20% Similarity=0.337 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~~~d 108 (173)
+++++|.|+ |++|..+++.+...|++|+++++++++.+.+...+ +... ..|-.+.+.+++ + .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999998 99999999999999999999999887765554433 2221 123344433222 2 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
No 350
>PRK01581 speE spermidine synthase; Validated
Probab=97.50 E-value=0.0029 Score=49.43 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcC-------------CCEEeeCCChHHHHHhcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLG-------------ADSFLVSRDQDEMQAAMGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g-------------~~~v~~~~~~~~~~~~~~~ 106 (173)
...++|||+|+| .|..+..+++..+ .+|++++.+++-.+.+++ +. .-.++..+..+++....+.
T Consensus 149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~-~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARN-VPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSL 226 (374)
T ss_pred CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHh-ccccchhccccCCCCceEEEECcHHHHHHhcCCC
Confidence 445799999976 5666666776544 499999999988888875 21 1112222334455544558
Q ss_pred ccEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeCC
Q 030694 107 MDGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 107 ~d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~ 138 (173)
+|++|--...+. -+..+.+.|+|+|.++....
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs~ 269 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQSN 269 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 999986654431 24577889999999887653
No 351
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.49 E-value=0.00087 Score=49.80 Aligned_cols=72 Identities=19% Similarity=0.284 Sum_probs=51.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE--EeeCCChHHHHHh-------cCCccEEE
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS--FLVSRDQDEMQAA-------MGTMDGII 111 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~-------~~~~d~vi 111 (173)
+++|.|+ +++|...++.+...|++|+++++++++.+.+.+++ +..+ ..|-.+.+.+++. .+++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899998 89999999999999999999999988766654433 3222 2343443332222 25899999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99885
No 352
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.49 E-value=0.00092 Score=49.55 Aligned_cols=75 Identities=20% Similarity=0.329 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHH-------hcCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQA-------AMGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~-------~~~~~d~v 110 (173)
.+++++|.|+ |++|...++.+...|++|++++++.++.+.+.+.++... ..|-.+.+.+.+ ..+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999998 999999999999999999999999888777666454221 123333332222 12479999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 999874
No 353
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.49 E-value=0.0024 Score=48.32 Aligned_cols=95 Identities=20% Similarity=0.245 Sum_probs=72.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.++...+++|++..+... .+
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~---------------------~l 195 (284)
T PRK14190 137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTK---------------------NL 195 (284)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCch---------------------hH
Confidence 467777777777887776678999999998 78999999999999999988643221 22
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 196 ~~~~~~ADIvI~AvG~p~~i~--~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 196 AELTKQADILIVAVGKPKLIT--ADMVKEGAVVIDVGVN 232 (284)
T ss_pred HHHHHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeecc
Confidence 233446899999999986544 3447999999999854
No 354
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.0012 Score=49.42 Aligned_cols=75 Identities=21% Similarity=0.349 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC-----CC-EE--eeCCChHHHHHh-------cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG-----AD-SF--LVSRDQDEMQAA-------MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~-------~~ 105 (173)
++++++|.|+ |.+|..+++.+...|++|+++++++++.+...+++. .. .+ .|-.+.+.+.+. .+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999998 999999999999999999999998776655443321 11 12 233333332222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|++|.+.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 355
>PRK05855 short chain dehydrogenase; Validated
Probab=97.49 E-value=0.0018 Score=53.48 Aligned_cols=75 Identities=23% Similarity=0.257 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~-------~~~~ 107 (173)
.+.+++|+|+ |++|..+++.+...|++|++++++.++.+.+.+. .|.. . ..|-.+.+.+.+. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999998 9999999999999999999999998776655442 2321 1 2344444333222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999986
No 356
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00098 Score=49.21 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-EE--eeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-SF--LVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+.+.+++ . .+++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999998 99999999999999999999999877766555433 221 11 23334332222 1 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999884
No 357
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=97.48 E-value=0.001 Score=50.38 Aligned_cols=89 Identities=22% Similarity=0.226 Sum_probs=61.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc---hH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP---LM 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~---~~ 121 (173)
+|.|+|.|.+|...+..++..|.+|+++++++++.+.+.+ .|..... ..+ . +...+.|++|-|++.... +.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~-~g~~~~~---~~~-~-~~~~~aDlVilavp~~~~~~~~~ 75 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIE-RGLVDEA---STD-L-SLLKDCDLVILALPIGLLLPPSE 75 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CCCcccc---cCC-H-hHhcCCCEEEEcCCHHHHHHHHH
Confidence 5889999999999988888889999999999988888877 6631111 111 1 124578999999997632 22
Q ss_pred HHHHhhhcCCEEEEeCCC
Q 030694 122 PLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 122 ~~~~~l~~~G~~v~~g~~ 139 (173)
.....++++..++.+++.
T Consensus 76 ~l~~~l~~~~ii~d~~Sv 93 (279)
T PRK07417 76 QLIPALPPEAIVTDVGSV 93 (279)
T ss_pred HHHHhCCCCcEEEeCcch
Confidence 333444555566666643
No 358
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=97.47 E-value=0.00063 Score=51.04 Aligned_cols=102 Identities=18% Similarity=0.063 Sum_probs=64.6
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHH-h-cCCccEEEEc
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQA-A-MGTMDGIIDT 113 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-~-~~~~d~vid~ 113 (173)
....+.++.+||-+|+| .|..+..+++..+++|++++.+++..+.+++.+....-+.....+.... . .+.+|+|+..
T Consensus 46 ~~l~l~~~~~VLDiGcG-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~ 124 (263)
T PTZ00098 46 SDIELNENSKVLDIGSG-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSR 124 (263)
T ss_pred HhCCCCCCCEEEEEcCC-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEh
Confidence 33445889999999986 3445566666678899999999988888877443211011111111111 1 2369999852
Q ss_pred C-----C--C-ccchHHHHHhhhcCCEEEEeCC
Q 030694 114 V-----S--A-VHPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 114 ~-----g--~-~~~~~~~~~~l~~~G~~v~~g~ 138 (173)
- + . ...+..+.+.|+|||+++....
T Consensus 125 ~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 125 DAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred hhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 1 1 1 1246678899999999987754
No 359
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.47 E-value=0.00081 Score=52.27 Aligned_cols=76 Identities=22% Similarity=0.341 Sum_probs=51.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------chHH----HHHHHcCCCE-E--e
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKS----EAVERLGADS-F--L 92 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~---------------------~~~~----~~~~~~g~~~-v--~ 92 (173)
.+.+|+|+|+|++|..++..+...|. ++++++.+. .|.+ .+++ ++.+. + +
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~-inp~v~i~~~ 101 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRK-INSEVEIVPV 101 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHH-HCCCcEEEEE
Confidence 46789999999999999999999998 888888763 1222 2233 33221 1 1
Q ss_pred e-CCChHHHHHhcCCccEEEEcCCCcc
Q 030694 93 V-SRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 93 ~-~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
. ....+.+.++..++|++|||+.+..
T Consensus 102 ~~~~~~~~~~~~~~~~DlVid~~D~~~ 128 (338)
T PRK12475 102 VTDVTVEELEELVKEVDLIIDATDNFD 128 (338)
T ss_pred eccCCHHHHHHHhcCCCEEEEcCCCHH
Confidence 1 1123445556678999999998764
No 360
>PRK08219 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.0034 Score=45.40 Aligned_cols=74 Identities=14% Similarity=0.195 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE--eeCCChHHHHHhc---CCccEEEEcCCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF--LVSRDQDEMQAAM---GTMDGIIDTVSA 116 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v--~~~~~~~~~~~~~---~~~d~vid~~g~ 116 (173)
.++++|.|+ |.+|...++.+... ++|++++++.++.+.+.+......+ .|-.+.+.+.+.. +++|.+|.+.|.
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 368999998 99999998887777 9999999998776666543322222 2334444444333 379999999986
Q ss_pred c
Q 030694 117 V 117 (173)
Q Consensus 117 ~ 117 (173)
.
T Consensus 82 ~ 82 (227)
T PRK08219 82 A 82 (227)
T ss_pred C
Confidence 3
No 361
>PRK05884 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.001 Score=48.49 Aligned_cols=71 Identities=23% Similarity=0.265 Sum_probs=52.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHh----cCCccEEEEcCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAA----MGTMDGIIDTVS 115 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~----~~~~d~vid~~g 115 (173)
+++|.|+ |++|...++.+...|++|+.+++++++.+.+.+.++... ..|-.+.+.+++. .+.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 5899998 999999999999999999999999888776655455432 2344444433332 236899999865
No 362
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=97.46 E-value=0.0013 Score=50.79 Aligned_cols=89 Identities=26% Similarity=0.341 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
-.|+++-|+|.|.+|.+.++.++..|++|...+++.. .+..+.++..++ + +.++....|++.-.++...
T Consensus 144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~--~~~~~~~~~~y~------~-l~ell~~sDii~l~~Plt~~T 214 (324)
T COG1052 144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN--PEAEKELGARYV------D-LDELLAESDIISLHCPLTPET 214 (324)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC--hHHHhhcCceec------c-HHHHHHhCCEEEEeCCCChHH
Confidence 3589999999999999999999999999999998876 333332555443 1 4445567888876666431
Q ss_pred --c-hHHHHHhhhcCCEEEEeCC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g~ 138 (173)
. -...+..|++++.+|.++-
T Consensus 215 ~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 215 RHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhhcCHHHHHhCCCCeEEEECCC
Confidence 1 2266788888888888764
No 363
>COG0499 SAM1 S-adenosylhomocysteine hydrolase [Coenzyme metabolism]
Probab=97.46 E-value=0.0015 Score=50.59 Aligned_cols=105 Identities=20% Similarity=0.189 Sum_probs=75.3
Q ss_pred HHHHHh-hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccE
Q 030694 31 YSPLRF-YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 31 ~~~l~~-~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~ 109 (173)
+-++.+ ...+-.|++++|.|-|-+|.-.++.++..|++|++++.++-+.-++.= -|. .|.. +.+....-|+
T Consensus 196 ~DgI~RaTn~liaGK~vVV~GYG~vGrG~A~~~rg~GA~ViVtEvDPI~AleA~M-dGf-~V~~------m~~Aa~~gDi 267 (420)
T COG0499 196 LDGILRATNVLLAGKNVVVAGYGWVGRGIAMRLRGMGARVIVTEVDPIRALEAAM-DGF-RVMT------MEEAAKTGDI 267 (420)
T ss_pred HHHHHhhhceeecCceEEEecccccchHHHHHhhcCCCeEEEEecCchHHHHHhh-cCc-EEEE------hHHhhhcCCE
Confidence 334444 344578999999999999999999999999999999998865544432 233 2322 2233335699
Q ss_pred EEEcCCCccchH-HHHHhhhcCCEEEEeCCCCCCc
Q 030694 110 IIDTVSAVHPLM-PLIGLLKSQGKLVLLGAPEKPL 143 (173)
Q Consensus 110 vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~ 143 (173)
++-++|+.+.+. .-+..|+.+..+...|....++
T Consensus 268 fiT~TGnkdVi~~eh~~~MkDgaIl~N~GHFd~EI 302 (420)
T COG0499 268 FVTATGNKDVIRKEHFEKMKDGAILANAGHFDVEI 302 (420)
T ss_pred EEEccCCcCccCHHHHHhccCCeEEecccccceec
Confidence 999999987665 5667788888888888655443
No 364
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.46 E-value=0.0026 Score=48.02 Aligned_cols=95 Identities=21% Similarity=0.234 Sum_probs=73.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.-++.++...+++|++.-+....+
T Consensus 138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l--------------------- 196 (284)
T PRK14177 138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNL--------------------- 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 467777777777777776678999999998 7899999999999999998876433222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin 233 (284)
T PRK14177 197 PSIVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYN 233 (284)
T ss_pred HHHHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCc
Confidence 223346789999999986544 4568999999999964
No 365
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0032 Score=47.08 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHH-------hcCCccE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQA-------AMGTMDG 109 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~~~~d~ 109 (173)
++++|.|+ |++|+..++.+...|++|++++++.++.+.+... .+.+. ..|-.+.+.+.+ ..+++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 36899998 9999999999988999999999988776654432 23221 123333332222 2247999
Q ss_pred EEEcCCC
Q 030694 110 IIDTVSA 116 (173)
Q Consensus 110 vid~~g~ 116 (173)
+|.+.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999985
No 366
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.46 E-value=0.00085 Score=51.77 Aligned_cols=75 Identities=13% Similarity=0.245 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc----CCCE----EeeCCC--hHHHHHh---cC--
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL----GADS----FLVSRD--QDEMQAA---MG-- 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~----g~~~----v~~~~~--~~~~~~~---~~-- 105 (173)
.|++++|.|+ +++|...++.....|++|+++++++++++.+.+++ +... ..|-.+ .+..+++ .+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999998 89999999988889999999999998877665433 2111 233332 2222222 23
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
.+|+++++.|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 46699998874
No 367
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0017 Score=48.62 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=53.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeCCChHHHHHh-------cCCccEEEE
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVSRDQDEMQAA-------MGTMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~~~~~~~~~~-------~~~~d~vid 112 (173)
+++||.|+ |.+|..+++.+...|++|+++.+++++.+.+.+..+... ..|-.+.+.+.+. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 57999998 999999999999999999999999888777766444221 2344444333221 247999999
Q ss_pred cCCCc
Q 030694 113 TVSAV 117 (173)
Q Consensus 113 ~~g~~ 117 (173)
+.|..
T Consensus 83 ~ag~~ 87 (276)
T PRK06482 83 NAGYG 87 (276)
T ss_pred CCCCC
Confidence 98853
No 368
>PLN03075 nicotianamine synthase; Provisional
Probab=97.45 E-value=0.001 Score=50.61 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcCCC----EEeeCCChHHHHH--hcCCccEEEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGAD----SFLVSRDQDEMQA--AMGTMDGIID 112 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~--~~~~~d~vid 112 (173)
...++|+-+|+|+.++.++.+++.+. .+++.++.+++..+.+++.+..+ .-+.....+..+. ..+++|+||.
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF~ 201 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVFL 201 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEEE
Confidence 37799999999999988888886654 47999999999888888754221 1111111122211 1358999987
Q ss_pred cCC------C-ccchHHHHHhhhcCCEEEEeC
Q 030694 113 TVS------A-VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 113 ~~g------~-~~~~~~~~~~l~~~G~~v~~g 137 (173)
.+- . ...++...+.|+|||.++.=.
T Consensus 202 ~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 202 AALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred ecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 741 1 135678889999999987654
No 369
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=97.45 E-value=0.0021 Score=47.42 Aligned_cols=101 Identities=21% Similarity=0.169 Sum_probs=72.0
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHcCCCEEee---CCChHHHHHhc-CCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERLGADSFLV---SRDQDEMQAAM-GTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~g~~~v~~---~~~~~~~~~~~-~~~d~vi 111 (173)
..+.+|++|+-.|.| .|.+++-+++..|. +|+..+..++..+.+++++..-.+.| ....+..+... ..+|.+|
T Consensus 90 ~gi~pg~rVlEAGtG-SG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~ 168 (256)
T COG2519 90 LGISPGSRVLEAGTG-SGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVF 168 (256)
T ss_pred cCCCCCCEEEEcccC-chHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEE
Confidence 445899999999887 57788888887765 99999999999988888654211111 11122221122 2799998
Q ss_pred EcCCCc-cchHHHHHhhhcCCEEEEeCCC
Q 030694 112 DTVSAV-HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 112 d~~g~~-~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
=-.+.| ..++.+.+.|+|||+++++...
T Consensus 169 LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 169 LDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred EcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 777766 5688999999999999998643
No 370
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.45 E-value=0.0012 Score=48.94 Aligned_cols=75 Identities=23% Similarity=0.330 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|..+++.+...|++|++++++.++.+.+.+.+ +.. ...|..+.+.+++ + .+++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999998 99999999999999999999999887766555422 222 1234444443322 1 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|.+|.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999885
No 371
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=97.44 E-value=0.0014 Score=47.42 Aligned_cols=107 Identities=14% Similarity=0.085 Sum_probs=69.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc-chHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP-SKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-+|++|+|+|+|.+|..=+++....|++|+++.... .++..+.++.+.. .+. ..+......+++++|-+++++..
T Consensus 10 l~~k~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~-~~~---~~~~~~~~~~~~lviaAt~d~~l 85 (210)
T COG1648 10 LEGKKVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIK-WIE---REFDAEDLDDAFLVIAATDDEEL 85 (210)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcc-hhh---cccChhhhcCceEEEEeCCCHHH
Confidence 368899999999999999999999999999998766 4444444422211 111 11111122259999999999864
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
-....+..++.+.++.+...+...++......
T Consensus 86 n~~i~~~a~~~~i~vNv~D~p~~~~f~~Pa~~ 117 (210)
T COG1648 86 NERIAKAARERRILVNVVDDPELCDFIFPAIV 117 (210)
T ss_pred HHHHHHHHHHhCCceeccCCcccCceecceee
Confidence 44555666677877777644443344433333
No 372
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.44 E-value=0.0013 Score=48.81 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcch-HHHHHHHc---CC-C-EE--eeCCChHH----HHHhc-
Q 030694 40 DKPGMHVGVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSK-KSEAVERL---GA-D-SF--LVSRDQDE----MQAAM- 104 (173)
Q Consensus 40 ~~~g~~vlI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~-~~~~~~~~---g~-~-~v--~~~~~~~~----~~~~~- 104 (173)
+..+++++|.|+ |++|..+++.+...| ++|+++++++++ ++.+.+++ +. . ++ .|..+.+. .+++.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999998 999999999877775 899999998875 54443322 32 1 22 23333332 22222
Q ss_pred -CCccEEEEcCCCc
Q 030694 105 -GTMDGIIDTVSAV 117 (173)
Q Consensus 105 -~~~d~vid~~g~~ 117 (173)
+++|+++.+.|..
T Consensus 85 ~g~id~li~~ag~~ 98 (253)
T PRK07904 85 GGDVDVAIVAFGLL 98 (253)
T ss_pred cCCCCEEEEeeecC
Confidence 4799999888764
No 373
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=97.43 E-value=0.0029 Score=48.38 Aligned_cols=90 Identities=14% Similarity=0.135 Sum_probs=61.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHH--
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMP-- 122 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~-- 122 (173)
+|.++|.|.+|...++.+...|.+|++.++++++.+.+.+ .|.... .+...+.+.....|+++-|+... ..+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~-~g~~~~---~s~~~~~~~~~~~dvIi~~vp~~-~~~~v~ 76 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKE-DRTTGV---ANLRELSQRLSAPRVVWVMVPHG-IVDAVL 76 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-cCCccc---CCHHHHHhhcCCCCEEEEEcCch-HHHHHH
Confidence 5889999999999888888899999999999999888887 553221 12222222234678888888876 3343
Q ss_pred --HHHhhhcCCEEEEeCCC
Q 030694 123 --LIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 123 --~~~~l~~~G~~v~~g~~ 139 (173)
+...++++-.++.++..
T Consensus 77 ~~l~~~l~~g~ivid~st~ 95 (298)
T TIGR00872 77 EELAPTLEKGDIVIDGGNS 95 (298)
T ss_pred HHHHhhCCCCCEEEECCCC
Confidence 33444555556665543
No 374
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0031 Score=45.94 Aligned_cols=69 Identities=20% Similarity=0.240 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHHhc------CCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQAAM------GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~~~------~~~d~vid~ 113 (173)
++++++|.|+ |++|...++.+...|++|+++.++.++ . .... ...|..+.+.+.+.. .++|++|.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----D-FPGELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----c-cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 3678999998 999999999999999999999988764 1 2211 223444443332221 268999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 885
No 375
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.42 E-value=0.0019 Score=47.29 Aligned_cols=75 Identities=24% Similarity=0.352 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-E--eeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-F--LVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |.+|..+++.+...|+.|+...++.++++.+....+... . .|-.+.+.+.+. .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999998 999999999999999999988888877776655455321 1 233333332222 3579999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999985
No 376
>PRK08291 ectoine utilization protein EutC; Validated
Probab=97.42 E-value=0.002 Score=49.93 Aligned_cols=94 Identities=19% Similarity=0.302 Sum_probs=63.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHc----CCCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERL----GADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~----g~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+..++++|+|+|..|.+.+..+.. .+. +|.++.++.++.+.+.+.+ |.. +....+ .++...+.|+++.++
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d---~~~al~~aDiVi~aT 205 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARD---VHEAVAGADIIVTTT 205 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCC---HHHHHccCCEEEEee
Confidence 456789999999999887776664 565 8999999999888776644 322 211222 233445789999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+....+-.. ..++++-.+..+|..
T Consensus 206 ~s~~p~i~~-~~l~~g~~v~~vg~d 229 (330)
T PRK08291 206 PSEEPILKA-EWLHPGLHVTAMGSD 229 (330)
T ss_pred CCCCcEecH-HHcCCCceEEeeCCC
Confidence 876322111 236777777777754
No 377
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.42 E-value=0.0033 Score=46.42 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEE-eCCcchHHHHHHHc---CCC-EE--eeCCChHHH----HHhc-----
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVI-STSPSKKSEAVERL---GAD-SF--LVSRDQDEM----QAAM----- 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~-~~~~~~~~~~~~~~---g~~-~v--~~~~~~~~~----~~~~----- 104 (173)
.+.+++|.|+ |++|..+++.+...|++|++. .+++++.+...+.+ +.. .. .|-.+.+.+ +++.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~ 84 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI 84 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence 3578999998 999999999999999988775 56666554443322 222 12 233443322 2211
Q ss_pred ----CCccEEEEcCCC
Q 030694 105 ----GTMDGIIDTVSA 116 (173)
Q Consensus 105 ----~~~d~vid~~g~ 116 (173)
+++|++|.+.|.
T Consensus 85 ~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 85 RVGTSEIDILVNNAGI 100 (254)
T ss_pred ccCCCCccEEEECCCC
Confidence 369999999876
No 378
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=97.41 E-value=0.0018 Score=49.92 Aligned_cols=75 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcCC-C-E--EeeCCChHHHHHhcCCccEEEEcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLGA-D-S--FLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g~-~-~--v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
.++++||.|+ |.+|..+++.+...| .+|++.++++.+...+.+.+.. . . ..|-.+.+.+.+...++|++|.+.
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A 82 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA 82 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence 4789999998 999999999887775 6899988876655444332321 1 1 125455666666667899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
|.
T Consensus 83 g~ 84 (324)
T TIGR03589 83 AL 84 (324)
T ss_pred cc
Confidence 75
No 379
>PRK06141 ornithine cyclodeaminase; Validated
Probab=97.41 E-value=0.0066 Score=46.79 Aligned_cols=95 Identities=24% Similarity=0.239 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHH-CCC-eEEEEeCCcchHHHHHHHcCCC--EEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKA-MGV-KVTVISTSPSKKSEAVERLGAD--SFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~-~g~-~v~~~~~~~~~~~~~~~~~g~~--~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+..++++|+|+|..|...++.... .+. +|+++.+++++.+.+.+.+... .+.... ...+...+.|+|+.|++.
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~~---~~~~av~~aDIVi~aT~s 199 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVVT---DLEAAVRQADIISCATLS 199 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEeC---CHHHHHhcCCEEEEeeCC
Confidence 678899999999999998864443 564 8999999999888777655321 121111 122334589999999987
Q ss_pred ccc-hHHHHHhhhcCCEEEEeCCCC
Q 030694 117 VHP-LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 117 ~~~-~~~~~~~l~~~G~~v~~g~~~ 140 (173)
... +. -..+++|-.+..+|...
T Consensus 200 ~~pvl~--~~~l~~g~~i~~ig~~~ 222 (314)
T PRK06141 200 TEPLVR--GEWLKPGTHLDLVGNFT 222 (314)
T ss_pred CCCEec--HHHcCCCCEEEeeCCCC
Confidence 632 22 24678888777777544
No 380
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0013 Score=48.64 Aligned_cols=75 Identities=21% Similarity=0.248 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+. .+.. . ..|-.+.+.+.+ . .+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999999989999999999988765544432 2322 1 123333332222 1 2478
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999885
No 381
>PLN02366 spermidine synthase
Probab=97.41 E-value=0.0029 Score=48.56 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHh-cCCccE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAA-MGTMDG 109 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~-~~~~d~ 109 (173)
...++||++|+|. |..+..+++..+. +|++++.+++-.+.+++.+.. -.++..+...++++. .+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 5578999999864 5556667776554 899999988777777664431 122333333455544 347999
Q ss_pred EEEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
||--...+ .-++.+.++|+++|.++.-+
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 98654432 12567789999999997654
No 382
>PRK14967 putative methyltransferase; Provisional
Probab=97.41 E-value=0.0028 Score=46.31 Aligned_cols=94 Identities=24% Similarity=0.235 Sum_probs=61.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHc---CCC-EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERL---GAD-SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
++++++||-+|+|. |..+..+++. ++ +|++++.+++..+.++++. +.. .+++.+-.+.. ..+.+|+|+...
T Consensus 34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~~--~~~~fD~Vi~np 109 (223)
T PRK14967 34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARAV--EFRPFDVVVSNP 109 (223)
T ss_pred cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhhc--cCCCeeEEEECC
Confidence 47889999999985 7777777764 66 9999999998777666532 322 23332211211 124799999763
Q ss_pred CCc---------------------------cchHHHHHhhhcCCEEEEeC
Q 030694 115 SAV---------------------------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~---------------------------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-. ..+..+.+.|++||+++.+-
T Consensus 110 Py~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 110 PYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred CCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 211 12346778999999998763
No 383
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.41 E-value=0.0034 Score=47.42 Aligned_cols=95 Identities=16% Similarity=0.186 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l--------------------- 193 (282)
T PRK14169 135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNL--------------------- 193 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCH---------------------
Confidence 467887777777877776578999999998 7889999999999999998764432212
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 194 ~~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin 230 (282)
T PRK14169 194 KQLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGIS 230 (282)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeecc
Confidence 223345789999999986544 3468999999999954
No 384
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0012 Score=48.30 Aligned_cols=76 Identities=21% Similarity=0.347 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+.+++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +... ..|..+.+.+.+. .+++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 3678999998 99999999998899999999999887655543322 3221 1233333332222 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|++|.+.|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999998753
No 385
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0013 Score=48.93 Aligned_cols=74 Identities=14% Similarity=0.265 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE---EeeCCChHHHHHh-------cCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS---FLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~~~d 108 (173)
+.+++|.|+ |++|..+++.+...|++|+++++++++.+.+.+. .+... ..|..+.+.+.+. .+++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 357999998 9999999999999999999999987765544332 23221 2233333322221 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
No 386
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=97.40 E-value=0.0039 Score=46.97 Aligned_cols=96 Identities=21% Similarity=0.149 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCC---------CEEeeCCChHHHHHhcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGA---------DSFLVSRDQDEMQAAMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~---------~~v~~~~~~~~~~~~~~~~d~v 110 (173)
+..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+.. -.++..+..+.+++..+.+|+|
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvI 149 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVI 149 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEE
Confidence 4456999999864 4445555565534 899999998877777664321 1122222234444445689999
Q ss_pred EEcCCCc----------cchHHHHHhhhcCCEEEEeC
Q 030694 111 IDTVSAV----------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 111 id~~g~~----------~~~~~~~~~l~~~G~~v~~g 137 (173)
+-....+ ..++.+.+.|+++|.++...
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 7544321 12457789999999998874
No 387
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=97.40 E-value=0.0018 Score=49.02 Aligned_cols=90 Identities=19% Similarity=0.211 Sum_probs=68.0
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
+|..+|.|.+|.-+++-+...|..|++.++++++ .+.++. .|+...-+ ..+.....|++|-|+++.....+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~-~Ga~~a~s------~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAA-AGATVAAS------PAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHH-cCCcccCC------HHHHHHhCCEEEEecCCHHHHHHH
Confidence 5788899999999999999999999999999999 666666 78754321 123344789999999998655544
Q ss_pred H-------HhhhcCCEEEEeCCCCC
Q 030694 124 I-------GLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~~~ 141 (173)
+ ..+++|..+|.++..+.
T Consensus 75 ~~g~~g~~~~~~~G~i~IDmSTisp 99 (286)
T COG2084 75 LFGENGLLEGLKPGAIVIDMSTISP 99 (286)
T ss_pred HhCccchhhcCCCCCEEEECCCCCH
Confidence 4 44567888888876553
No 388
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=97.39 E-value=0.0014 Score=47.77 Aligned_cols=93 Identities=17% Similarity=0.108 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEE-----------------eeCCChHHHHHh
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSF-----------------LVSRDQDEMQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v-----------------~~~~~~~~~~~~ 103 (173)
.++.+||+.|+| .|.-+..++. .|++|++++.++...+.+.++.+.... ...+-.+.....
T Consensus 36 ~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~ 113 (218)
T PRK13255 36 PAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD 113 (218)
T ss_pred CCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence 567899999987 5677777765 899999999999877766443442110 000001110111
Q ss_pred cCCccEEEEcCCCc--------cchHHHHHhhhcCCEEEE
Q 030694 104 MGTMDGIIDTVSAV--------HPLMPLIGLLKSQGKLVL 135 (173)
Q Consensus 104 ~~~~d~vid~~g~~--------~~~~~~~~~l~~~G~~v~ 135 (173)
.+.+|.++|..--- ..+..+.+.|+|||+++.
T Consensus 114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l 153 (218)
T PRK13255 114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLL 153 (218)
T ss_pred CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEE
Confidence 23689999866421 236678899999997554
No 389
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.39 E-value=0.0033 Score=47.59 Aligned_cols=95 Identities=20% Similarity=0.251 Sum_probs=71.7
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~---------------------l 192 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD---------------------L 192 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777777776568999999998 789999999999999999876543322 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 193 ~~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDVGin 229 (287)
T PRK14173 193 PAVTRRADVLVVAVGRPHLIT--PEMVRPGAVVVDVGIN 229 (287)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCc
Confidence 223345789999999886543 4457999999999954
No 390
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.39 E-value=0.0061 Score=44.75 Aligned_cols=76 Identities=22% Similarity=0.273 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCCEE---eeCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGADSF---LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~~v---~~~~~~~~~~~----~---~~~ 106 (173)
++++++|.|+ |++|..+++.+...|++|++... ++.+.....+. .+.... .|-.+.+.+.+ + .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3678999998 99999999999999998887543 33332222221 343322 34444333222 1 258
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|++|.+.|..
T Consensus 82 id~li~~ag~~ 92 (246)
T PRK12938 82 IDVLVNNAGIT 92 (246)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 391
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.38 E-value=0.0019 Score=52.00 Aligned_cols=88 Identities=25% Similarity=0.334 Sum_probs=59.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---ch
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PL 120 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~ 120 (173)
+|.|+|+ |.+|.+.+..++..|.+|+++++++++......++|.... .+ ..+.....|++|-|++... .+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~~---~~---~~e~~~~aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEYA---ND---NIDAAKDADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCeec---cC---HHHHhccCCEEEEecCHHHHHHHH
Confidence 6889985 9999999999999999999999988775444333675211 11 1223457899998888652 12
Q ss_pred HHHHHhhhcCCEEEEeCC
Q 030694 121 MPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 121 ~~~~~~l~~~G~~v~~g~ 138 (173)
......++++..++.+++
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 233344566777777775
No 392
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.38 E-value=0.0017 Score=47.43 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=50.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHH----HHh---cCCccEEEEc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEM----QAA---MGTMDGIIDT 113 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~----~~~---~~~~d~vid~ 113 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.....+..+... ..|..+.+.+ +++ .+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 468999998 899999999999999999999988764332222245321 2333333322 222 2479999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 885
No 393
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0029 Score=46.77 Aligned_cols=70 Identities=24% Similarity=0.298 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCC--C-EEeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGA--D-SFLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~-------~~~~d~v 110 (173)
.+++++|.|+ |++|..+++.+...|++|+++++++++ .. .+. . ...|..+.+.+++. .+++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TV-DGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hh-cCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 999999999999999999999998754 11 221 1 12344443332222 2478999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999884
No 394
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.38 E-value=0.0038 Score=47.16 Aligned_cols=95 Identities=21% Similarity=0.262 Sum_probs=72.5
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~n---------------------l 194 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKD---------------------L 194 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467877777777877776578999999998 788999999999999999876543322 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvIsAvGkp~~i~~--~~vk~GavVIDvGin 231 (282)
T PRK14166 195 SLYTRQADLIIVAAGCVNLLRS--DMVKEGVIVVDVGIN 231 (282)
T ss_pred HHHHhhCCEEEEcCCCcCccCH--HHcCCCCEEEEeccc
Confidence 2233467899999999865543 458999999999953
No 395
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.38 E-value=0.0013 Score=47.79 Aligned_cols=78 Identities=18% Similarity=0.287 Sum_probs=50.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc------------------chHHHHHHH---cCCC-EE--eeC-C
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEAVER---LGAD-SF--LVS-R 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~------------------~~~~~~~~~---~g~~-~v--~~~-~ 95 (173)
...+|+|+|+|++|..+++.+.+.|. ++++++.+. .|.+.+.+. ++.. .+ ++. -
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~~i 106 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNEKI 106 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEeeec
Confidence 46789999999999999999999999 799988772 122222221 2221 11 111 1
Q ss_pred ChHHHHHhcCCccEEEEcCCCccc
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
..+...+...++|+||||+.+...
T Consensus 107 ~~~~~~~~~~~~DvVI~a~D~~~~ 130 (212)
T PRK08644 107 DEDNIEELFKDCDIVVEAFDNAET 130 (212)
T ss_pred CHHHHHHHHcCCCEEEECCCCHHH
Confidence 123333455689999999887743
No 396
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.38 E-value=0.0016 Score=48.22 Aligned_cols=76 Identities=24% Similarity=0.302 Sum_probs=53.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
-++++++|.|+ |++|..+++.+...|++|+++++++++.+.+.++ .+.. . ..|..+.+.+.+ + .++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 35889999998 9999999998888999999999988766554432 2321 1 224344332222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.+|.+.|.
T Consensus 89 id~vi~~ag~ 98 (256)
T PRK06124 89 LDILVNNVGA 98 (256)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 397
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0015 Score=47.83 Aligned_cols=76 Identities=13% Similarity=0.226 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
..+++++|.|+ |++|..+++.+...|++|+++++++++.+.+.+.+ +.. . ..|-.+.+.+.. + .++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35678999998 99999999999999999999999887766554422 211 1 223333332222 1 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|+++.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 398
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=97.37 E-value=0.00097 Score=47.84 Aligned_cols=93 Identities=18% Similarity=0.120 Sum_probs=58.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHH-HhcCCccEEEEcCCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQ-AAMGTMDGIIDTVSA 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~-~~~~~~d~vid~~g~ 116 (173)
.++.+||-+|+| .|..+..+++ .|++|++++.+++-.+.+++.. +...+ +....+... ...+.+|+|+....-
T Consensus 29 ~~~~~vLDiGcG-~G~~a~~La~-~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~fD~I~~~~~~ 105 (197)
T PRK11207 29 VKPGKTLDLGCG-NGRNSLYLAA-NGFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLTFDGEYDFILSTVVL 105 (197)
T ss_pred CCCCcEEEECCC-CCHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCCcCCCcCEEEEecch
Confidence 567899999987 3666677776 4889999999988666665522 22111 111111111 123479999876442
Q ss_pred --------ccchHHHHHhhhcCCEEEEe
Q 030694 117 --------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 117 --------~~~~~~~~~~l~~~G~~v~~ 136 (173)
...+..+.+.|+|||.++.+
T Consensus 106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 106 MFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 12456777889999996543
No 399
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.37 E-value=0.0018 Score=47.67 Aligned_cols=74 Identities=19% Similarity=0.238 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch--HHHHHHHcCCC-E--EeeCCChHHHH----Hh---cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK--KSEAVERLGAD-S--FLVSRDQDEMQ----AA---MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~--~~~~~~~~g~~-~--v~~~~~~~~~~----~~---~~~~d 108 (173)
.+++++|.|+ |++|...++.+...|++|+++++++.. .+.+.+ .+.. . ..|-.+.+.+. ++ .+++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEA-LGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHh-cCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 899999999999999999999986521 122222 4432 1 22333433222 22 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99999885
No 400
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.37 E-value=0.0077 Score=42.76 Aligned_cols=98 Identities=20% Similarity=0.188 Sum_probs=58.5
Q ss_pred HhhCCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCCCEE-eeCCChHHHH---H-h-cCCc
Q 030694 35 RFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGADSF-LVSRDQDEMQ---A-A-MGTM 107 (173)
Q Consensus 35 ~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~---~-~-~~~~ 107 (173)
+....++++++||.+|+|+-++......+..+ .+|++++.++.+ ...+...+ .|..+.+... + . .+++
T Consensus 25 ~~~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 25 QKFKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKV 99 (188)
T ss_pred HHhcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCc
Confidence 34556689999999999755543333333323 489999998764 11233222 2332222221 1 2 2379
Q ss_pred cEEEEcC-----CC------------ccchHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTV-----SA------------VHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~-----g~------------~~~~~~~~~~l~~~G~~v~~g 137 (173)
|+++... |. ...+..+.++|+|+|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 9999532 22 124667889999999998865
No 401
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.37 E-value=0.0016 Score=47.89 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ |.+|...++.+...|++|++++++.++...+... .+.. .+ .|-.+.+.+.+. .+++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 9999999999999999999999987655444332 2321 11 233343333222 2479
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|.+|.+.|..
T Consensus 85 d~vi~~ag~~ 94 (251)
T PRK12826 85 DILVANAGIF 94 (251)
T ss_pred CEEEECCCCC
Confidence 9999998763
No 402
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=97.37 E-value=0.0063 Score=45.21 Aligned_cols=76 Identities=20% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHH---cCCCE---EeeCCChHHHHHh-------cC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVER---LGADS---FLVSRDQDEMQAA-------MG 105 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~---~g~~~---v~~~~~~~~~~~~-------~~ 105 (173)
-++++++|.|+ |++|...++.+...|++|+++.++.. +...+.+. .+... ..|-.+.+.+.+. .+
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35789999998 99999999999999999888877543 33322221 23221 2344444333222 24
Q ss_pred CccEEEEcCCC
Q 030694 106 TMDGIIDTVSA 116 (173)
Q Consensus 106 ~~d~vid~~g~ 116 (173)
++|+++.+.|.
T Consensus 85 ~id~lv~~ag~ 95 (261)
T PRK08936 85 TLDVMINNAGI 95 (261)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 403
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=97.36 E-value=0.0031 Score=45.65 Aligned_cols=98 Identities=28% Similarity=0.213 Sum_probs=62.1
Q ss_pred hCCCCCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EEeeCCChHHHHHhcCCccEEE
Q 030694 37 YGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SFLVSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 37 ~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v~~~~~~~~~~~~~~~~d~vi 111 (173)
....+++++||-+|+| .|..+..+++.. .+|+.++.+++..+.+++.+ +.. .++..+..+.. ...+.+|+++
T Consensus 73 ~l~~~~~~~VLeiG~G-sG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~I~ 149 (212)
T PRK00312 73 LLELKPGDRVLEIGTG-SGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGW-PAYAPFDRIL 149 (212)
T ss_pred hcCCCCCCEEEEECCC-ccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCC-CcCCCcCEEE
Confidence 3445789999999986 344445555543 48999999988777776643 322 12222111110 0124799998
Q ss_pred EcCCCccchHHHHHhhhcCCEEEEeC
Q 030694 112 DTVSAVHPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 112 d~~g~~~~~~~~~~~l~~~G~~v~~g 137 (173)
.............+.|++||+++..-
T Consensus 150 ~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 150 VTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred EccCchhhhHHHHHhcCCCcEEEEEE
Confidence 76655555667889999999987653
No 404
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=97.36 E-value=0.0016 Score=50.04 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC---CEE--eeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA---DSF--LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~---~~v--~~~~~~~~~~~~~~~~d~vid 112 (173)
.++++||.|+ |.+|..+++.+...|++|+++.++.++........ +. -.. .|-.+.+.+.+...++|++|.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 83 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH 83 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence 4789999998 99999999999999999998888766543332211 11 112 244445555555668999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.+.
T Consensus 84 ~A~~ 87 (325)
T PLN02989 84 TASP 87 (325)
T ss_pred eCCC
Confidence 9984
No 405
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.36 E-value=0.0017 Score=48.73 Aligned_cols=75 Identities=21% Similarity=0.327 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH----h---cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA----A---MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~----~---~~~~ 107 (173)
++++++|.|+ |++|+..++.+...|++|+++++++++.+.+.+.+ +... ..|..+.+.+.. + .+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 99999999999999999999999877665554432 3221 223333332222 1 2589
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999883
No 406
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.36 E-value=0.004 Score=47.37 Aligned_cols=95 Identities=18% Similarity=0.148 Sum_probs=71.0
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.-++.++...|++|++.-+....+
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l--------------------- 195 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDL--------------------- 195 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCH---------------------
Confidence 457776777777777766568999999998 7889999999999999998875432222
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 196 ~~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin 232 (297)
T PRK14186 196 ASITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIH 232 (297)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 223345789999999886444 3458899999999854
No 407
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=97.36 E-value=0.0039 Score=47.43 Aligned_cols=96 Identities=17% Similarity=0.158 Sum_probs=73.2
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~n--------------------- 203 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPD--------------------- 203 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC---------------------
Confidence 3567887777777887776578999999998 688999999999999999987543221
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 204 l~~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin 241 (299)
T PLN02516 204 PESIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN 241 (299)
T ss_pred HHHHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence 2223446799999999886544 3458999999999954
No 408
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.36 E-value=0.0035 Score=51.00 Aligned_cols=71 Identities=24% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-h----HHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-K----KSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~----~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
..+++++|+|+|++|+.++..++..|++|++++.++. . .+.+++ .|......... . ...++|+++-+.|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~-~gv~~~~~~~~-~----~~~~~D~Vv~s~G 87 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEA-LGATVRLGPGP-T----LPEDTDLVVTSPG 87 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHH-cCCEEEECCCc-c----ccCCCCEEEECCC
Confidence 4578999999999999999999999999999986543 1 223334 56543332211 1 2346899998888
Q ss_pred Cc
Q 030694 116 AV 117 (173)
Q Consensus 116 ~~ 117 (173)
.+
T Consensus 88 i~ 89 (480)
T PRK01438 88 WR 89 (480)
T ss_pred cC
Confidence 75
No 409
>PRK06720 hypothetical protein; Provisional
Probab=97.36 E-value=0.002 Score=45.06 Aligned_cols=76 Identities=21% Similarity=0.268 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~-------~~~~~ 107 (173)
+++.++|.|+ +++|...+..+...|++|+++++++++.+...+++ +... ..|..+.+..++ ..+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999998 89999999998889999999998877654443323 4221 233333332222 12579
Q ss_pred cEEEEcCCCc
Q 030694 108 DGIIDTVSAV 117 (173)
Q Consensus 108 d~vid~~g~~ 117 (173)
|+++++.|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999998864
No 410
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.35 E-value=0.0017 Score=47.71 Aligned_cols=74 Identities=20% Similarity=0.294 Sum_probs=51.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc-----CCC-E--EeeCCChHHHHH----h---cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL-----GAD-S--FLVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~----~---~~~ 106 (173)
+++++|.|+ |++|...++.+...|++|+++++++++.+.+...+ +.. . ..|..+.+.+.+ + .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999998 99999999988889999999999988776654422 211 1 124444432222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (248)
T PRK08251 82 LDRVIVNAGI 91 (248)
T ss_pred CCEEEECCCc
Confidence 9999999874
No 411
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.35 E-value=0.0043 Score=46.87 Aligned_cols=96 Identities=18% Similarity=0.210 Sum_probs=73.5
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
+-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+....+
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl-------------------- 195 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDL-------------------- 195 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCH--------------------
Confidence 4578887777888888776578999999998 7889999999999999998875432211
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 196 -~~~~k~ADIvIsAvGkp~~i~~--~~vk~gavVIDvGin 232 (282)
T PRK14180 196 -KSHTTKADILIVAVGKPNFITA--DMVKEGAVVIDVGIN 232 (282)
T ss_pred -HHHhhhcCEEEEccCCcCcCCH--HHcCCCcEEEEeccc
Confidence 1223467999999999965443 568999999999954
No 412
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=97.35 E-value=0.0022 Score=49.73 Aligned_cols=86 Identities=22% Similarity=0.287 Sum_probs=59.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|.+|.|+|.|.+|..+++.++..|++|++.++++++.... .. . ...+.+.....|+++.+++....
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~--~~~l~ell~~aDiVil~lP~t~~t~ 213 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----Y--KDSVKEAIKDADIISLHVPANKESY 213 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----c--cCCHHHHHhcCCEEEEeCCCcHHHH
Confidence 57899999999999999999999999999999876532211 00 0 01233445578888888876521
Q ss_pred ---hHHHHHhhhcCCEEEEeCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (173)
....+..|+++..+|.++.
T Consensus 214 ~li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 214 HLFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHHhHHHHhcCCCCcEEEEcCC
Confidence 2255567777777777763
No 413
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.34 E-value=0.0034 Score=50.25 Aligned_cols=95 Identities=14% Similarity=0.128 Sum_probs=63.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh-----------cCCccEEEE
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA-----------MGTMDGIID 112 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~-----------~~~~d~vid 112 (173)
.+|.|+|.|.+|+.++..+...|.+|+++++++++.+.++. |...+..+.-.+.+.+. ..+.|++|-
T Consensus 4 ~kI~VIGlG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~--g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii 81 (415)
T PRK11064 4 ETISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR--GEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLI 81 (415)
T ss_pred cEEEEECcchhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHC--CCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEE
Confidence 57999999999999999988899999999999998887543 43222221112222111 126899999
Q ss_pred cCCCc---------cch----HHHHHhhhcCCEEEEeCCCC
Q 030694 113 TVSAV---------HPL----MPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 113 ~~g~~---------~~~----~~~~~~l~~~G~~v~~g~~~ 140 (173)
|++.+ ..+ +.+...++++..++..+..+
T Consensus 82 ~vptp~~~~~~~dl~~v~~~~~~i~~~l~~g~iVI~~STv~ 122 (415)
T PRK11064 82 AVPTPFKGDHEPDLTYVEAAAKSIAPVLKKGDLVILESTSP 122 (415)
T ss_pred EcCCCCCCCCCcChHHHHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 99985 122 33445566666666665433
No 414
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.34 E-value=0.0042 Score=46.93 Aligned_cols=95 Identities=12% Similarity=0.157 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~---------------------l 194 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD---------------------L 194 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467887777777777776578999999998 788999999999999998876543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvI~AvG~~~~i~--~~~vk~GavVIDvGin 231 (284)
T PRK14170 195 PQVAKEADILVVATGLAKFVK--KDYIKPGAIVIDVGMD 231 (284)
T ss_pred HHHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEccCc
Confidence 233446789999999986544 3458899999999954
No 415
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=97.34 E-value=0.0033 Score=45.80 Aligned_cols=113 Identities=22% Similarity=0.343 Sum_probs=74.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CCE-EeeCCC---h----HHHHHh---cC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----ADS-FLVSRD---Q----DEMQAA---MG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~~-v~~~~~---~----~~~~~~---~~ 105 (173)
.|+++++.|+ |++|+.....+...|+++.++.-+.|+.+...+ +- ... ++-.-+ . ..++++ .+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~ak-L~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg 82 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAK-LQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG 82 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHH-HhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence 3899999987 999999999999999999888887776555544 33 222 211111 1 122222 35
Q ss_pred CccEEEEcCCCcc-----------------chHHHHHhhh-----cCCEEEEeCCCCCCcccCccccccCcc
Q 030694 106 TMDGIIDTVSAVH-----------------PLMPLIGLLK-----SQGKLVLLGAPEKPLELPAFPLLTGEE 155 (173)
Q Consensus 106 ~~d~vid~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~~~~~~~~~~~~~~~~~ 155 (173)
.+|+.|+..|.-. ....++..+. +||.++..++..|-.+.+..+.+....
T Consensus 83 ~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsK 154 (261)
T KOG4169|consen 83 TIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASK 154 (261)
T ss_pred ceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcc
Confidence 8999999888641 2234444442 678999999887766666666665444
No 416
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=97.34 E-value=0.0025 Score=48.67 Aligned_cols=90 Identities=14% Similarity=0.203 Sum_probs=62.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL 123 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~ 123 (173)
.+|.++|.|.+|...++.+...|.+|+++++++++.+.+.+ .|.... .+ ..+.....|++|-|+.....+...
T Consensus 2 ~~Ig~IGlG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~-~g~~~~---~s---~~~~~~~aDvVi~~vp~~~~~~~v 74 (296)
T PRK15461 2 AAIAFIGLGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVD-KGATPA---AS---PAQAAAGAEFVITMLPNGDLVRSV 74 (296)
T ss_pred CeEEEEeeCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-cCCccc---CC---HHHHHhcCCEEEEecCCHHHHHHH
Confidence 36889999999999988888899999999999999888877 564321 11 122344789999999887433433
Q ss_pred H-------HhhhcCCEEEEeCCCC
Q 030694 124 I-------GLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ~-------~~l~~~G~~v~~g~~~ 140 (173)
+ ..++++-.++.++...
T Consensus 75 l~~~~~i~~~l~~g~lvid~sT~~ 98 (296)
T PRK15461 75 LFGENGVCEGLSRDALVIDMSTIH 98 (296)
T ss_pred HcCcccHhhcCCCCCEEEECCCCC
Confidence 2 2345555666665433
No 417
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=97.34 E-value=0.0012 Score=55.90 Aligned_cols=76 Identities=20% Similarity=0.289 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc---------------------hHHHHHHHcCCCEEeeCCC--h
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS---------------------KKSEAVERLGADSFLVSRD--Q 97 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~---------------------~~~~~~~~~g~~~v~~~~~--~ 97 (173)
..+++|+|+|+|+.|+.++..++..|++|+++++.+. +.+.+++ +|.+...+... .
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~-~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSA-MGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHH-CCeEEECCCEeCCc
Confidence 3588999999999999999999999999999987643 2344444 67543322211 1
Q ss_pred HHHHHhcCCccEEEEcCCCc
Q 030694 98 DEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 98 ~~~~~~~~~~d~vid~~g~~ 117 (173)
-.+.++..++|.+|.++|..
T Consensus 404 i~~~~~~~~~DavilAtGa~ 423 (654)
T PRK12769 404 ISLESLLEDYDAVFVGVGTY 423 (654)
T ss_pred CCHHHHHhcCCEEEEeCCCC
Confidence 11222334799999999864
No 418
>PRK12743 oxidoreductase; Provisional
Probab=97.33 E-value=0.0055 Score=45.42 Aligned_cols=74 Identities=18% Similarity=0.253 Sum_probs=48.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeC-CcchHHHHHHH---cCCC-EE--eeCCChHHH----HHh---cCCc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVIST-SPSKKSEAVER---LGAD-SF--LVSRDQDEM----QAA---MGTM 107 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~-~~~~~~~~~~~---~g~~-~v--~~~~~~~~~----~~~---~~~~ 107 (173)
+++++|.|+ |++|..+++.+...|++|+++.+ +.++.+.+.+. .+.. +. .|-.+.+.+ +++ .+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999998 89999999999999999988865 43333333221 3432 22 344443322 222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999885
No 419
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.33 E-value=0.0019 Score=47.92 Aligned_cols=75 Identities=15% Similarity=0.187 Sum_probs=51.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC---EEeeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD---SFLVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~-------~~~ 106 (173)
..+++++|.|+ |++|...++.+...|++|+++.++ ++.+.+.+. .+.. ...|-.+.+.+.+. .++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999998 999999999999999999999887 443333332 3322 12343443332222 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 420
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0025 Score=46.65 Aligned_cols=75 Identities=20% Similarity=0.291 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C---EEeeCCC--hH----HHHHh---c
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D---SFLVSRD--QD----EMQAA---M 104 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~---~v~~~~~--~~----~~~~~---~ 104 (173)
++++++|.|+ |++|...++.+...|++|+++++++++.+.+.+++ +. + ...|..+ .+ ..+++ .
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4689999998 99999999999999999999999988766654433 21 1 1123221 11 11112 2
Q ss_pred -CCccEEEEcCCC
Q 030694 105 -GTMDGIIDTVSA 116 (173)
Q Consensus 105 -~~~d~vid~~g~ 116 (173)
+.+|++|.+.|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 578999999984
No 421
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.33 E-value=0.0044 Score=47.04 Aligned_cols=96 Identities=11% Similarity=0.111 Sum_probs=72.3
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHH
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDE 99 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~ 99 (173)
..+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+....+
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l-------------------- 197 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDL-------------------- 197 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCH--------------------
Confidence 3467777777777877776678999999998 7889999999999999999876543222
Q ss_pred HHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 100 MQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 100 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 198 -~~~~~~ADIvVsAvGkp~~i~~--~~ik~gaiVIDVGin 234 (294)
T PRK14187 198 -ADYCSKADILVAAVGIPNFVKY--SWIKKGAIVIDVGIN 234 (294)
T ss_pred -HHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEeccc
Confidence 2233467899999998865443 447899999999853
No 422
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.33 E-value=0.0045 Score=46.89 Aligned_cols=95 Identities=12% Similarity=0.226 Sum_probs=71.6
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~---------------------L 196 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHN---------------------L 196 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 467777777777887776678999999998 788999999999999998876543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 197 ~~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin 233 (288)
T PRK14171 197 SSITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN 233 (288)
T ss_pred HHHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence 223346789999999886444 3458899999999943
No 423
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=97.33 E-value=0.0022 Score=49.91 Aligned_cols=75 Identities=21% Similarity=0.245 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC----CC-EEeeCCChHHHHHhcC--CccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG----AD-SFLVSRDQDEMQAAMG--TMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~~~--~~d~vid~ 113 (173)
+++++||.|+ |.+|..+++.+...|.+|+++++++.........++ .. ...|-.+.+.+.+... ++|++|.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 4789999998 999999999999999999999987665433322122 11 1224344444444443 68999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.+.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 984
No 424
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=97.33 E-value=0.0027 Score=44.71 Aligned_cols=93 Identities=19% Similarity=0.312 Sum_probs=55.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc------------------chHHHHHHH---cCC-CEEe--eCC-ChH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP------------------SKKSEAVER---LGA-DSFL--VSR-DQD 98 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~------------------~~~~~~~~~---~g~-~~v~--~~~-~~~ 98 (173)
+|+|+|+|++|...++.+.+.|. +++.++.+. .|.+.+++. +.. ..+. +.. +.+
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~~ 80 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDEN 80 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecChh
Confidence 48999999999999999999999 799998775 122222221 221 1221 111 122
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcC-CEEEEeC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQ-GKLVLLG 137 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g 137 (173)
...+...++|++|+|+.+...-....+.+.+. +.-...+
T Consensus 81 ~~~~~l~~~DlVi~~~d~~~~r~~i~~~~~~~~~ip~i~~ 120 (174)
T cd01487 81 NLEGLFGDCDIVVEAFDNAETKAMLAESLLGNKNKPVVCA 120 (174)
T ss_pred hHHHHhcCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 33445568999999988875333344444333 5433343
No 425
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=97.32 E-value=0.0023 Score=49.19 Aligned_cols=35 Identities=43% Similarity=0.654 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCc
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSP 76 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~ 76 (173)
.|+++.|+|.|.+|...++.++..|++|++.++..
T Consensus 144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~ 178 (311)
T PRK08410 144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSG 178 (311)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCc
Confidence 68999999999999999999999999999998753
No 426
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=97.32 E-value=0.0044 Score=45.71 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=64.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-----cCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-----MGT 106 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-----~~~ 106 (173)
..+.++||-+|.| +|..+..+++.. +.+|+.++.+++..+.+++.+ |.. .++..+..+.+.++ .+.
T Consensus 66 ~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~~~~~ 144 (234)
T PLN02781 66 IMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNNDPKPE 144 (234)
T ss_pred HhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCCCCCC
Confidence 3567899999974 455555566654 349999999999888887743 321 23333334444443 247
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
||.+|--...+ ..++.+++++++||.++.-.
T Consensus 145 fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 145 FDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 99998544322 34678889999999988543
No 427
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.32 E-value=0.0047 Score=46.62 Aligned_cols=95 Identities=17% Similarity=0.219 Sum_probs=72.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
.+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~n---------------------l 194 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTAD---------------------L 194 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC---------------------H
Confidence 468887777777887776678999999998 788999999999999988886443221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvI~AvGk~~~i~~--~~ik~gaiVIDvGin 231 (282)
T PRK14182 195 AGEVGRADILVAAIGKAELVKG--AWVKEGAVVIDVGMN 231 (282)
T ss_pred HHHHhhCCEEEEecCCcCccCH--HHcCCCCEEEEeece
Confidence 2233467999999998865443 458899999999954
No 428
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.32 E-value=0.0036 Score=47.97 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=34.1
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHH
Q 030694 41 KPGMHVGVVGL---GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAV 83 (173)
Q Consensus 41 ~~g~~vlI~G~---g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~ 83 (173)
-.|++++|.|+ .++|.+.++.+...|++|++ .++.++++.+.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~ 51 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFE 51 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHH
Confidence 35899999998 79999999999999999988 66655554443
No 429
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=97.32 E-value=0.0031 Score=49.82 Aligned_cols=77 Identities=23% Similarity=0.376 Sum_probs=53.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC-------------------cchHHHHHHHc---CC-CEEeeCC--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS-------------------PSKKSEAVERL---GA-DSFLVSR-- 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~-------------------~~~~~~~~~~~---g~-~~v~~~~-- 95 (173)
.+.+|+|+|+|++|..++..+...|. ++++++.+ ..|.+.+.+.+ .. ..+....
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~ 213 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER 213 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence 56789999999999999999999999 89999887 33444443333 22 2221111
Q ss_pred -ChHHHHHhcCCccEEEEcCCCcc
Q 030694 96 -DQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 96 -~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
+.+...++..++|+|++|+.+..
T Consensus 214 ~~~~~~~~~~~~~D~Vv~~~d~~~ 237 (376)
T PRK08762 214 VTSDNVEALLQDVDVVVDGADNFP 237 (376)
T ss_pred CChHHHHHHHhCCCEEEECCCCHH
Confidence 12334445568999999999874
No 430
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.32 E-value=0.0045 Score=46.69 Aligned_cols=95 Identities=19% Similarity=0.229 Sum_probs=71.1
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.=++.++...|++|++.-+.... +
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~---------------------l 194 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKD---------------------L 194 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcC---------------------H
Confidence 467777777777777776578999999998 588999999999999988865332211 1
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 195 ~~~~~~ADIvV~AvGkp~~i~--~~~vk~gavvIDvGin 231 (281)
T PRK14183 195 KAHTKKADIVIVGVGKPNLIT--EDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHHhhCCEEEEecCcccccC--HHHcCCCcEEEEeecc
Confidence 223446899999999986544 3458899999999953
No 431
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=97.31 E-value=0.0032 Score=48.43 Aligned_cols=88 Identities=19% Similarity=0.208 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
-.+++|.|+|.|.+|...++.++..|.+|++..+.....+.+.. .|.. +. .+.+.....|+++-+++.+..
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~-~G~~-v~------sl~Eaak~ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKA-DGFE-VM------SVSEAVRTAQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHH-cCCE-EC------CHHHHHhcCCEEEEeCCChHHH
Confidence 46899999999999999999999999999998776544445544 5653 21 234556689999999987532
Q ss_pred --h-HHHHHhhhcCCEEEEe
Q 030694 120 --L-MPLIGLLKSQGKLVLL 136 (173)
Q Consensus 120 --~-~~~~~~l~~~G~~v~~ 136 (173)
+ ...+..|+++..+++.
T Consensus 86 ~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred HHHHHHHHhcCCCCCEEEEC
Confidence 2 2456777887766554
No 432
>PLN02244 tocopherol O-methyltransferase
Probab=97.31 E-value=0.0026 Score=49.53 Aligned_cols=95 Identities=23% Similarity=0.298 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC-C--EEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA-D--SFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~-~--~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+++++||-+|+| .|..+..+++..|++|++++.+++..+.+++.. |. + .++..+..+ .....+.+|+|+...
T Consensus 117 ~~~~~VLDiGCG-~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~-~~~~~~~FD~V~s~~ 194 (340)
T PLN02244 117 KRPKRIVDVGCG-IGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALN-QPFEDGQFDLVWSME 194 (340)
T ss_pred CCCCeEEEecCC-CCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCccc-CCCCCCCccEEEECC
Confidence 678899999987 466667778877999999999988777666522 21 1 121111111 101124799998644
Q ss_pred CCc------cchHHHHHhhhcCCEEEEeC
Q 030694 115 SAV------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 115 g~~------~~~~~~~~~l~~~G~~v~~g 137 (173)
... ..+..+.+.|+|||+++...
T Consensus 195 ~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 195 SGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred chhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 322 24567889999999998764
No 433
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=97.31 E-value=0.0043 Score=46.22 Aligned_cols=96 Identities=22% Similarity=0.180 Sum_probs=65.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHC-CCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAM-GVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~-g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
.++++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++.+....++..+..++. ....+|+++....-.
T Consensus 28 ~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d~~~~~--~~~~fD~v~~~~~l~ 104 (258)
T PRK01683 28 PLENPRYVVDLGCG-PGNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEADIASWQ--PPQALDLIFANASLQ 104 (258)
T ss_pred CCcCCCEEEEEccc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECchhccC--CCCCccEEEEccChh
Confidence 34778999999986 456666777765 46999999999988888775443333332221111 123799998654431
Q ss_pred ------cchHHHHHhhhcCCEEEEeC
Q 030694 118 ------HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 118 ------~~~~~~~~~l~~~G~~v~~g 137 (173)
..+..+.+.|+|||+++...
T Consensus 105 ~~~d~~~~l~~~~~~LkpgG~~~~~~ 130 (258)
T PRK01683 105 WLPDHLELFPRLVSLLAPGGVLAVQM 130 (258)
T ss_pred hCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence 24668889999999988763
No 434
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.31 E-value=0.0033 Score=42.19 Aligned_cols=95 Identities=23% Similarity=0.361 Sum_probs=57.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc-------------------hHHHHHHH---cC-CCEEe--eCC-
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAVER---LG-ADSFL--VSR- 95 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~~~---~g-~~~v~--~~~- 95 (173)
..+|+|+|+|++|..++..+...|. ++++++.+.- |.+.+++. +. ...+. +..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 4689999999999999999999999 8888876521 22222221 22 11221 111
Q ss_pred ChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCE-EEEeC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGK-LVLLG 137 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~-~v~~g 137 (173)
..+...+...++|++|+|+........+.+..+..+. ++..+
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~ 124 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG 124 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 1334444456899999999987533344444455554 44443
No 435
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.31 E-value=0.0021 Score=47.87 Aligned_cols=75 Identities=17% Similarity=0.279 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~-------~~~~ 107 (173)
.+++++|.|+ +++|...+..+...|++|+++.+++++.+.+.+.+ +... ..|-.+.+.+.+. .+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5789999998 89999999988899999999999887766554433 3221 2343443322221 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999986
No 436
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.31 E-value=0.011 Score=43.54 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=61.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc-chHHH----HHHHcCCC-EE--eeCCChHHHHH-------hcC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP-SKKSE----AVERLGAD-SF--LVSRDQDEMQA-------AMG 105 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~-~~~~~----~~~~~g~~-~v--~~~~~~~~~~~-------~~~ 105 (173)
.+++++|.|+ |.+|...++.+...|++|+...++. ++... +++ .+.. .. .|..+.+.+.. ..+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKE-NGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH-cCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 3689999998 9999999998889999988776532 22222 222 3322 11 33333332222 124
Q ss_pred CccEEEEcCCCcc-------------------------chHHHHHhhhcCCEEEEeCCCCC
Q 030694 106 TMDGIIDTVSAVH-------------------------PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 106 ~~d~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++|++|.+.|... ..+.+++.+++.|+++.+++..+
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 7999999998410 12244556667789999886543
No 437
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=97.30 E-value=0.0027 Score=48.32 Aligned_cols=90 Identities=19% Similarity=0.231 Sum_probs=60.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE---EeeC--CChHHHHHhcCCccEEEEcCCCccc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS---FLVS--RDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~---v~~~--~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
+|.|+|+|.+|...+..+...|.+|+.+++++++.+.+++ .|... -... ...+...+. +.+|++|-|+....
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~- 78 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALNE-NGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ- 78 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHHH-cCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence 5899999999999888888889999999998887777776 45321 0000 001112223 68999999999773
Q ss_pred hHHHHHhhhc----CCEEEEeC
Q 030694 120 LMPLIGLLKS----QGKLVLLG 137 (173)
Q Consensus 120 ~~~~~~~l~~----~G~~v~~g 137 (173)
+..++..+++ +..++.+.
T Consensus 79 ~~~~~~~l~~~l~~~~~iv~~~ 100 (304)
T PRK06522 79 LPAALPSLAPLLGPDTPVLFLQ 100 (304)
T ss_pred HHHHHHHHhhhcCCCCEEEEec
Confidence 5666655553 44666554
No 438
>PRK08317 hypothetical protein; Provisional
Probab=97.30 E-value=0.0031 Score=45.98 Aligned_cols=100 Identities=25% Similarity=0.316 Sum_probs=64.9
Q ss_pred hhCCCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CC-CEEeeCCChHHHHHhcCCccE
Q 030694 36 FYGLDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GA-DSFLVSRDQDEMQAAMGTMDG 109 (173)
Q Consensus 36 ~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~~~~~d~ 109 (173)
....+.++++||.+|+|. |..+..+++..+ .++++++.+++..+.+++.. +. ..+...+..+ .....+.+|+
T Consensus 13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~ 90 (241)
T PRK08317 13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADG-LPFPDGSFDA 90 (241)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccccc-CCCCCCCceE
Confidence 334458899999999974 777778887763 58999999998888887741 11 1121111111 0011247898
Q ss_pred EEEcCC-----Cc-cchHHHHHhhhcCCEEEEeC
Q 030694 110 IIDTVS-----AV-HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 110 vid~~g-----~~-~~~~~~~~~l~~~G~~v~~g 137 (173)
++.... .+ ..+..+.++|+++|.++...
T Consensus 91 v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 91 VRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 875432 21 25678889999999998765
No 439
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.29 E-value=0.0032 Score=46.60 Aligned_cols=76 Identities=20% Similarity=0.226 Sum_probs=52.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC---EEeeCCChHHHHHh-------cCCc
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD---SFLVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~-------~~~~ 107 (173)
-++++++|+|+ |++|..+++.+...|++|+++++++++.+...+ ..+.. ...|-.+.+.+... .+++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 35789999998 899999999999999999999988876533332 12322 12333333322221 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999984
No 440
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=97.29 E-value=0.0028 Score=52.24 Aligned_cols=90 Identities=26% Similarity=0.325 Sum_probs=63.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.++... .+...+ +|...+ +.++++....|+++-+++...
T Consensus 137 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~~-~g~~~~------~~l~ell~~aDvV~l~lPlt~~T~ 208 (525)
T TIGR01327 137 YGKTLGVIGLGRIGSIVAKRAKAFGMKVLAYDPYIS-PERAEQ-LGVELV------DDLDELLARADFITVHTPLTPETR 208 (525)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCC-hhHHHh-cCCEEc------CCHHHHHhhCCEEEEccCCChhhc
Confidence 578999999999999999999999999999987532 223333 554221 123445567889988887542
Q ss_pred -ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 209 ~li~~~~l~~mk~ga~lIN~aRG 231 (525)
T TIGR01327 209 GLIGAEELAKMKKGVIIVNCARG 231 (525)
T ss_pred cCcCHHHHhcCCCCeEEEEcCCC
Confidence 12 3567788888888877643
No 441
>PLN02476 O-methyltransferase
Probab=97.29 E-value=0.0053 Score=46.38 Aligned_cols=97 Identities=11% Similarity=0.049 Sum_probs=65.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHC--CCeEEEEeCCcchHHHHHHHc---CCC---EEeeCCChHHHHHh-----cCC
Q 030694 40 DKPGMHVGVVGLGGLGHVAVKFAKAM--GVKVTVISTSPSKKSEAVERL---GAD---SFLVSRDQDEMQAA-----MGT 106 (173)
Q Consensus 40 ~~~g~~vlI~G~g~~G~~a~~~~~~~--g~~v~~~~~~~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~-----~~~ 106 (173)
..+.++||-+|.+ +|..++.+++.. +.+|+.++.+++..+.+++.+ |.. .++.....+.+.++ .+.
T Consensus 116 ~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~ 194 (278)
T PLN02476 116 ILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS 194 (278)
T ss_pred hcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence 3568899999974 455555666655 347999999999888887754 432 23334444555544 247
Q ss_pred ccEEEEcCCCc---cchHHHHHhhhcCCEEEEeC
Q 030694 107 MDGIIDTVSAV---HPLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 107 ~d~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 137 (173)
||.+|--.... ..++.+++.|++||.++.=.
T Consensus 195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 99997554432 34678899999999988554
No 442
>PLN02214 cinnamoyl-CoA reductase
Probab=97.28 E-value=0.0085 Score=46.61 Aligned_cols=97 Identities=23% Similarity=0.264 Sum_probs=63.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHH--HHHHHcC---CC-EEe--eCCChHHHHHhcCCccEEE
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKS--EAVERLG---AD-SFL--VSRDQDEMQAAMGTMDGII 111 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~--~~~~~~g---~~-~v~--~~~~~~~~~~~~~~~d~vi 111 (173)
.++++++|.|+ |.+|..+++.+...|.+|++++++.++.. .+.. +. .. .++ |-.+.+.+.+...++|++|
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRE-LEGGKERLILCKADLQDYEALKAAIDGCDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHH-hhCCCCcEEEEecCcCChHHHHHHHhcCCEEE
Confidence 45789999998 99999999999999999999998765422 1222 21 11 122 3334455555566899999
Q ss_pred EcCCCcc------------chHHHHHhhhcCC--EEEEeCC
Q 030694 112 DTVSAVH------------PLMPLIGLLKSQG--KLVLLGA 138 (173)
Q Consensus 112 d~~g~~~------------~~~~~~~~l~~~G--~~v~~g~ 138 (173)
.+.+... ....+++.+++.| +++.+++
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 9987531 1123444444443 7887765
No 443
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=97.28 E-value=0.0047 Score=47.78 Aligned_cols=95 Identities=14% Similarity=0.131 Sum_probs=72.4
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+....+
T Consensus 193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl--------------------- 251 (345)
T PLN02897 193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDP--------------------- 251 (345)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCH---------------------
Confidence 467777777777777776578999999998 7889999999999999988765432211
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 252 ~~~~~~ADIvIsAvGkp~~v~--~d~vk~GavVIDVGin 288 (345)
T PLN02897 252 EQITRKADIVIAAAGIPNLVR--GSWLKPGAVVIDVGTT 288 (345)
T ss_pred HHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 223446899999999996544 3458999999999954
No 444
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=97.27 E-value=0.0027 Score=48.73 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CC--C-EE--eeCCChHHHHHhcCCccEEEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GA--D-SF--LVSRDQDEMQAAMGTMDGIID 112 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~--~-~v--~~~~~~~~~~~~~~~~d~vid 112 (173)
.+++|+|.|+ |.+|..+++.+...|.+|+++.++.++.+.+.+.. +. . .+ .|-.+.+.+.+...++|++|.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 4789999998 99999999998889999999888776544333211 11 1 12 233334445555568999999
Q ss_pred cCCC
Q 030694 113 TVSA 116 (173)
Q Consensus 113 ~~g~ 116 (173)
+.+.
T Consensus 84 ~A~~ 87 (322)
T PLN02986 84 TASP 87 (322)
T ss_pred eCCC
Confidence 9874
No 445
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=97.27 E-value=0.0065 Score=43.32 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=77.2
Q ss_pred cchhhHHHHHHHHHHhhCC---------CCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE
Q 030694 21 APLLCAGITVYSPLRFYGL---------DKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS 90 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~---------~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~ 90 (173)
.-+||+....+..+..+.. --.|++++|+|. ..+|.=++.++...|++|++...+.-.. ... .+.
T Consensus 31 ~~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~-~~~-- 105 (197)
T cd01079 31 SILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTR-GES-- 105 (197)
T ss_pred CccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--ccc-ccc--
Confidence 3467887777777776643 367999999998 6889999999999999999886543211 111 110
Q ss_pred EeeCC-----C-hHHHHHhcCCccEEEEcCCCccc-hHHHHHhhhcCCEEEEeCCC
Q 030694 91 FLVSR-----D-QDEMQAAMGTMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 91 v~~~~-----~-~~~~~~~~~~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~ 139 (173)
...+ + .+.+.+.....|+++-++|.+.. +. -..+++|..++.+|..
T Consensus 106 -~~hs~t~~~~~~~~l~~~~~~ADIVIsAvG~~~~~i~--~d~ik~GavVIDVGi~ 158 (197)
T cd01079 106 -IRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVP--TELLKDGAICINFASI 158 (197)
T ss_pred -cccccccccchhhHHHHHhhhCCEEEEccCCCCCccC--HHHcCCCcEEEEcCCC
Confidence 0111 1 12244566789999999999964 34 4558999999999954
No 446
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=97.27 E-value=0.0037 Score=51.52 Aligned_cols=89 Identities=22% Similarity=0.306 Sum_probs=65.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc---
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH--- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~--- 118 (173)
.|+++.|+|.|.+|...++.++..|++|++.++...+ +.... .|.... .+.++....|+++-+++...
T Consensus 139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~~-~g~~~~-------~l~ell~~aDiV~l~lP~t~~t~ 209 (526)
T PRK13581 139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERAAQ-LGVELV-------SLDELLARADFITLHTPLTPETR 209 (526)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHHh-cCCEEE-------cHHHHHhhCCEEEEccCCChHhh
Confidence 5889999999999999999999999999999985432 22333 554322 13345567899998888642
Q ss_pred -ch-HHHHHhhhcCCEEEEeCCC
Q 030694 119 -PL-MPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 119 -~~-~~~~~~l~~~G~~v~~g~~ 139 (173)
.+ ...+..|+++..++.++..
T Consensus 210 ~li~~~~l~~mk~ga~lIN~aRG 232 (526)
T PRK13581 210 GLIGAEELAKMKPGVRIINCARG 232 (526)
T ss_pred cCcCHHHHhcCCCCeEEEECCCC
Confidence 22 3677888888888888643
No 447
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.27 E-value=0.0027 Score=46.75 Aligned_cols=74 Identities=22% Similarity=0.280 Sum_probs=52.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCE---EeeCCChHH-------HHHhcCCcc
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADS---FLVSRDQDE-------MQAAMGTMD 108 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~~~~~~-------~~~~~~~~d 108 (173)
++++||.|+ |.+|..+++.+...|++|+++++++++.+.+.+.+ +... ..|-.+.+. +.+..+++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 357999998 99999999999899999999999887766655422 2221 124444432 222235799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.+.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988875
No 448
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.26 E-value=0.0036 Score=50.46 Aligned_cols=71 Identities=25% Similarity=0.345 Sum_probs=50.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hH----HHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KK----SEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~----~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
.+++++|+|+|.+|+.+++.+...|++|+++++++. .. +.+.+ .|.. ++-....+ +..+++|+++.+.|.
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~-~~~~~~~~---~~~~~~d~vv~~~g~ 78 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIE-LVLGEYPE---EFLEGVDLVVVSPGV 78 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence 478999999988999999999999999999998752 22 22322 4543 22222222 334579999999986
Q ss_pred c
Q 030694 117 V 117 (173)
Q Consensus 117 ~ 117 (173)
.
T Consensus 79 ~ 79 (450)
T PRK14106 79 P 79 (450)
T ss_pred C
Confidence 4
No 449
>PRK10637 cysG siroheme synthase; Provisional
Probab=97.26 E-value=0.003 Score=51.15 Aligned_cols=107 Identities=9% Similarity=0.001 Sum_probs=67.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc-hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS-KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~-~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~ 119 (173)
-.+++|||+|+|.++..=++.....|++|+++...-. ++..+.+ -|.-..+.. ++......++++||-|++++..
T Consensus 10 l~~~~vlvvGgG~vA~rk~~~ll~~ga~v~visp~~~~~~~~l~~-~~~i~~~~~---~~~~~dl~~~~lv~~at~d~~~ 85 (457)
T PRK10637 10 LRDRDCLLVGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWAD-AGMLTLVEG---PFDESLLDTCWLAIAATDDDAV 85 (457)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHh-CCCEEEEeC---CCChHHhCCCEEEEECCCCHHH
Confidence 4689999999999998878888889999999876532 3333333 333222221 1222234588999999999864
Q ss_pred hHHHHHhhhcCCEEEEeCCCCCCcccCccccc
Q 030694 120 LMPLIGLLKSQGKLVLLGAPEKPLELPAFPLL 151 (173)
Q Consensus 120 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 151 (173)
-.+.....+..|.++.+...+....+-...+.
T Consensus 86 n~~i~~~a~~~~~lvN~~d~~~~~~f~~pa~~ 117 (457)
T PRK10637 86 NQRVSEAAEARRIFCNVVDAPKAASFIMPSII 117 (457)
T ss_pred hHHHHHHHHHcCcEEEECCCcccCeEEEeeEE
Confidence 44555555667887777644433333333333
No 450
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=97.26 E-value=0.0037 Score=45.91 Aligned_cols=99 Identities=18% Similarity=0.311 Sum_probs=61.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc------h-HHHHHHHcCCCE---------EeeCCC--------
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS------K-KSEAVERLGADS---------FLVSRD-------- 96 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~------~-~~~~~~~~g~~~---------v~~~~~-------- 96 (173)
+..+|+|+|.|++|.+++..+.+.|+ +++.++.++- | ...+....|... -+|+..
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f 108 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF 108 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence 45889999999999999999999998 8888875432 1 111211123110 122221
Q ss_pred --hHHHHHhcC-CccEEEEcCCCccc-hHHHHHhhhcCCEEEEeCCCC
Q 030694 97 --QDEMQAAMG-TMDGIIDTVSAVHP-LMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 97 --~~~~~~~~~-~~d~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~~ 140 (173)
.+.+.++.. ++|+++||.-.-.. ...+..|.+.+=.++.++...
T Consensus 109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag 156 (263)
T COG1179 109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG 156 (263)
T ss_pred hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence 234444443 89999999987632 223334666666777776444
No 451
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=97.26 E-value=0.0028 Score=47.05 Aligned_cols=96 Identities=21% Similarity=0.266 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCc---
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAV--- 117 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~--- 117 (173)
.++.+||-+|+|. |..+..++ ..|.+|++++.+++.++.+++.......+..+..+ .....+.+|+|+....-.
T Consensus 41 ~~~~~vLDiGcG~-G~~~~~l~-~~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~-~~~~~~~fD~V~s~~~l~~~~ 117 (251)
T PRK10258 41 RKFTHVLDAGCGP-GWMSRYWR-ERGSQVTALDLSPPMLAQARQKDAADHYLAGDIES-LPLATATFDLAWSNLAVQWCG 117 (251)
T ss_pred cCCCeEEEeeCCC-CHHHHHHH-HcCCeEEEEECCHHHHHHHHhhCCCCCEEEcCccc-CcCCCCcEEEEEECchhhhcC
Confidence 4678899999874 55554444 46889999999999888888743322222221111 111123699998654321
Q ss_pred ---cchHHHHHhhhcCCEEEEeCCC
Q 030694 118 ---HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 118 ---~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
..+..+.+.|+|||.++.....
T Consensus 118 d~~~~l~~~~~~Lk~gG~l~~~~~~ 142 (251)
T PRK10258 118 NLSTALRELYRVVRPGGVVAFTTLV 142 (251)
T ss_pred CHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 2467888999999999877543
No 452
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=97.26 E-value=0.0049 Score=50.23 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
..+++++|+|+|++|.+++..+...|+++++..+++++.+.+.+.++.. .++.. .... ...+|++++|++...
T Consensus 330 ~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~---~~~~-l~~~DiVInatP~g~ 402 (477)
T PRK09310 330 LNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLE---SLPE-LHRIDIIINCLPPSV 402 (477)
T ss_pred cCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechh---Hhcc-cCCCCEEEEcCCCCC
Confidence 4678999999999999999999999999999999888877766645432 22211 1111 247999999998763
No 453
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=97.25 E-value=0.0051 Score=47.85 Aligned_cols=95 Identities=16% Similarity=0.188 Sum_probs=72.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEM 100 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 100 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++...+++|++.-+.... +
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~n---------------------l 268 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKN---------------------P 268 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCC---------------------H
Confidence 467777777777777776568999999998 788999999999999999887543221 2
Q ss_pred HHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 101 QAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 101 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 269 ~~~~r~ADIVIsAvGkp~~i~--~d~vK~GAvVIDVGIn 305 (364)
T PLN02616 269 EEITREADIIISAVGQPNMVR--GSWIKPGAVVIDVGIN 305 (364)
T ss_pred HHHHhhCCEEEEcCCCcCcCC--HHHcCCCCEEEecccc
Confidence 223446899999999986544 3458999999999953
No 454
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.25 E-value=0.0026 Score=48.93 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=60.8
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEe------e--CCChHHHHHhcCCccEEEEcCCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFL------V--SRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~------~--~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+|.|+|+|.+|...+..+...|.+|+++++++++.+.+++ .+..... . ........+...+.|++|-|+..
T Consensus 3 kI~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~~ 81 (325)
T PRK00094 3 KIAVLGAGSWGTALAIVLARNGHDVTLWARDPEQAAEINA-DRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVPS 81 (325)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCCH
Confidence 6899999999999999988899999999999888887776 3311000 0 00011122334578999999998
Q ss_pred ccchHHHHHhh----hcCCEEEEeC
Q 030694 117 VHPLMPLIGLL----KSQGKLVLLG 137 (173)
Q Consensus 117 ~~~~~~~~~~l----~~~G~~v~~g 137 (173)
. .+...+..+ .++..++.+.
T Consensus 82 ~-~~~~v~~~l~~~~~~~~~vi~~~ 105 (325)
T PRK00094 82 Q-ALREVLKQLKPLLPPDAPIVWAT 105 (325)
T ss_pred H-HHHHHHHHHHhhcCCCCEEEEEe
Confidence 6 355554444 4455566663
No 455
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=97.24 E-value=0.0062 Score=46.56 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=61.3
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccchHHH-
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPLMPL- 123 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~- 123 (173)
+|.++|.|.+|...++-+...|.+|++.++++++.+.+.+ .|... ..+....-+.....|++|-|++....+...
T Consensus 2 ~Ig~IGlG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~-~g~~~---~~s~~~~~~~~~~advVi~~vp~~~~~~~v~ 77 (299)
T PRK12490 2 KLGLIGLGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGK-LGITA---RHSLEELVSKLEAPRTIWVMVPAGEVTESVI 77 (299)
T ss_pred EEEEEcccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-CCCee---cCCHHHHHHhCCCCCEEEEEecCchHHHHHH
Confidence 5788999999999888888899999999999988888876 66431 112221111112368888888876333333
Q ss_pred ---HHhhhcCCEEEEeCCCC
Q 030694 124 ---IGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 124 ---~~~l~~~G~~v~~g~~~ 140 (173)
...++++..++.++...
T Consensus 78 ~~i~~~l~~g~ivid~st~~ 97 (299)
T PRK12490 78 KDLYPLLSPGDIVVDGGNSR 97 (299)
T ss_pred HHHhccCCCCCEEEECCCCC
Confidence 33455666777776443
No 456
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.24 E-value=0.012 Score=43.04 Aligned_cols=75 Identities=21% Similarity=0.324 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE-Ee--eCCChHHHHH----h---cCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS-FL--VSRDQDEMQA----A---MGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~-v~--~~~~~~~~~~----~---~~~ 106 (173)
.+++++|.|+ |.+|...++.+...|++|+++.++..+ .+...+. .+... .+ |-.+.+.+.+ + .++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 999999999999999999888776543 2222221 23221 22 4444333222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.+|.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999885
No 457
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=97.24 E-value=0.0089 Score=44.00 Aligned_cols=70 Identities=19% Similarity=0.229 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHh-------cCCccEE
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~-------~~~~d~v 110 (173)
++++++|.|+ |.+|...++.+...|++|++++++. ... .+.. . ..|-.+.+.+++. .+++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5689999998 8999999999999999999999876 122 2321 1 1233333333222 2469999
Q ss_pred EEcCCCc
Q 030694 111 IDTVSAV 117 (173)
Q Consensus 111 id~~g~~ 117 (173)
|.+.|..
T Consensus 81 i~~ag~~ 87 (252)
T PRK08220 81 VNAAGIL 87 (252)
T ss_pred EECCCcC
Confidence 9998863
No 458
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.24 E-value=0.0056 Score=53.99 Aligned_cols=90 Identities=18% Similarity=0.217 Sum_probs=63.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCC-Ce-------------EEEEeCCcchHHHHHHHc-CCC-EEeeCCChHHHHHhcC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMG-VK-------------VTVISTSPSKKSEAVERL-GAD-SFLVSRDQDEMQAAMG 105 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g-~~-------------v~~~~~~~~~~~~~~~~~-g~~-~v~~~~~~~~~~~~~~ 105 (173)
..++|+|+|+|.+|...++.+.... +. |++.+.+.++.+.+.+.+ +.. ..+|..+.+.+.+...
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 4678999999999999888886543 34 777888877777766645 322 3455667666666666
Q ss_pred CccEEEEcCCCccchHHHHHhhhcCC
Q 030694 106 TMDGIIDTVSAVHPLMPLIGLLKSQG 131 (173)
Q Consensus 106 ~~d~vid~~g~~~~~~~~~~~l~~~G 131 (173)
++|+|+.|++...+...+..|++.|-
T Consensus 648 ~~DaVIsalP~~~H~~VAkaAieaGk 673 (1042)
T PLN02819 648 QVDVVISLLPASCHAVVAKACIELKK 673 (1042)
T ss_pred CCCEEEECCCchhhHHHHHHHHHcCC
Confidence 79999999998754444444544443
No 459
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=97.24 E-value=0.0024 Score=46.00 Aligned_cols=34 Identities=26% Similarity=0.456 Sum_probs=30.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTS 75 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~ 75 (173)
...+|+|+|+|++|...++.+.+.|. ++++++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999 79999887
No 460
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.24 E-value=0.0069 Score=45.99 Aligned_cols=41 Identities=29% Similarity=0.274 Sum_probs=36.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE 84 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~ 84 (173)
.+|.|+|+|.+|...++.+...|.+|+++++++++++.+++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKE 44 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 57999999999999999998899999999999887776654
No 461
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=97.23 E-value=0.0042 Score=47.02 Aligned_cols=93 Identities=26% Similarity=0.327 Sum_probs=61.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcc--hHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 43 GMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPS--KKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 43 g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~--~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
..+|.|+|.|.+|.+.++..+..|..+.+++++.+ +.+...+ +|. ++....+.........|+||=+++... .
T Consensus 3 ~~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~-lgv---~d~~~~~~~~~~~~~aD~VivavPi~~-~ 77 (279)
T COG0287 3 SMKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALE-LGV---IDELTVAGLAEAAAEADLVIVAVPIEA-T 77 (279)
T ss_pred CcEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhh-cCc---ccccccchhhhhcccCCEEEEeccHHH-H
Confidence 46788999999999999999999997766655544 4444444 663 222111222223447899999999873 4
Q ss_pred HHHHHh----hhcCCEEEEeCCCC
Q 030694 121 MPLIGL----LKSQGKLVLLGAPE 140 (173)
Q Consensus 121 ~~~~~~----l~~~G~~v~~g~~~ 140 (173)
...+.. ++++..++.+++..
T Consensus 78 ~~~l~~l~~~l~~g~iv~Dv~S~K 101 (279)
T COG0287 78 EEVLKELAPHLKKGAIVTDVGSVK 101 (279)
T ss_pred HHHHHHhcccCCCCCEEEeccccc
Confidence 444444 44677788887544
No 462
>PRK03612 spermidine synthase; Provisional
Probab=97.23 E-value=0.0051 Score=50.67 Aligned_cols=96 Identities=20% Similarity=0.120 Sum_probs=64.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHH--cC----------CCEEeeCCChHHHHHhcCCc
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVER--LG----------ADSFLVSRDQDEMQAAMGTM 107 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~--~g----------~~~v~~~~~~~~~~~~~~~~ 107 (173)
++.++||++|+| .|..+..+++..+ .+|++++.+++-.+.+++. +. .-+++..+..+++++..+++
T Consensus 296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f 374 (521)
T PRK03612 296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF 374 (521)
T ss_pred CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence 457899999986 3555566666544 5999999999988887772 11 11233333344554445689
Q ss_pred cEEEEcCCCcc-----------chHHHHHhhhcCCEEEEeC
Q 030694 108 DGIIDTVSAVH-----------PLMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 108 d~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g 137 (173)
|+|+-....+. .++.+.+.|+|+|.++...
T Consensus 375 DvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 375 DVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred CEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 99986654431 2457788999999988764
No 463
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=97.23 E-value=0.0038 Score=48.65 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc--CCC-EE--eeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL--GAD-SF--LVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
..+.+|||.|+ |.+|..+++.+...|.+|++++++.++...+...+ +.. .+ .|-.+.+.+.+...++|++|.+.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 56789999998 99999999999999999999988776555443322 111 12 23334455555556899999998
Q ss_pred CC
Q 030694 115 SA 116 (173)
Q Consensus 115 g~ 116 (173)
+.
T Consensus 88 ~~ 89 (353)
T PLN02896 88 AS 89 (353)
T ss_pred cc
Confidence 75
No 464
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.23 E-value=0.0021 Score=50.04 Aligned_cols=77 Identities=27% Similarity=0.428 Sum_probs=51.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------chHHHHHHH---cCCCE-E--ee
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSP---------------------SKKSEAVER---LGADS-F--LV 93 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~---------------------~~~~~~~~~---~g~~~-v--~~ 93 (173)
...+|+|+|+|++|..++..+...|. ++++++.+. .|.+.+.+. ++.+. + +.
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~ 102 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV 102 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence 45889999999999999999999999 899998863 122222221 33221 1 11
Q ss_pred -CCChHHHHHhcCCccEEEEcCCCcc
Q 030694 94 -SRDQDEMQAAMGTMDGIIDTVSAVH 118 (173)
Q Consensus 94 -~~~~~~~~~~~~~~d~vid~~g~~~ 118 (173)
.-..+...++..++|++++|+.+..
T Consensus 103 ~~~~~~~~~~~~~~~DlVid~~Dn~~ 128 (339)
T PRK07688 103 QDVTAEELEELVTGVDLIIDATDNFE 128 (339)
T ss_pred ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence 1123344555678999999999874
No 465
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.23 E-value=0.0056 Score=46.37 Aligned_cols=95 Identities=20% Similarity=0.221 Sum_probs=71.8
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHH----CCCeEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA----MGVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~----~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
-+||+....+..+..+..--.|++++|+|. ..+|.=++.++.. .+++|++..+....
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~------------------ 197 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPD------------------ 197 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchh------------------
Confidence 468887777777888776678999999998 6889998888887 78888887654322
Q ss_pred hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|.+..+.. ..+++|..++.+|..
T Consensus 198 ---l~~~~~~ADIVI~AvG~p~li~~--~~vk~GavVIDVGi~ 235 (286)
T PRK14184 198 ---LAEECREADFLFVAIGRPRFVTA--DMVKPGAVVVDVGIN 235 (286)
T ss_pred ---HHHHHHhCCEEEEecCCCCcCCH--HHcCCCCEEEEeeee
Confidence 22233467899999999865544 446999999999854
No 466
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0034 Score=46.48 Aligned_cols=74 Identities=22% Similarity=0.279 Sum_probs=52.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC--E--EeeCCChHHHHHh-------cCCccEE
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD--S--FLVSRDQDEMQAA-------MGTMDGI 110 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~-------~~~~d~v 110 (173)
+++++|.|+ |.+|...+..+...|++|++++++.++.+.+.+.+... + ..|-.+.+.+... .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999998 99999999998889999999999888776655534211 1 2344444333221 1369999
Q ss_pred EEcCCC
Q 030694 111 IDTVSA 116 (173)
Q Consensus 111 id~~g~ 116 (173)
|.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999985
No 467
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.22 E-value=0.009 Score=45.86 Aligned_cols=92 Identities=17% Similarity=0.199 Sum_probs=60.9
Q ss_pred EEEEEcCChHHHHHHHHHHHCCC--eEEEEeCCcchHHHHHHHc-------CCCEEeeCCChHHHHHhcCCccEEEEcCC
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGV--KVTVISTSPSKKSEAVERL-------GADSFLVSRDQDEMQAAMGTMDGIIDTVS 115 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~--~v~~~~~~~~~~~~~~~~~-------g~~~v~~~~~~~~~~~~~~~~d~vid~~g 115 (173)
+|.|+|+|.+|..++..+...|. +++++++++++.+.....+ +....+...+. .+ ..+.|++|.++|
T Consensus 2 kI~IIGaG~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~---~~-l~~aDIVIitag 77 (306)
T cd05291 2 KVVIIGAGHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDY---SD-CKDADIVVITAG 77 (306)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCH---HH-hCCCCEEEEccC
Confidence 68999999999999998888884 7999999888755443333 22211211111 12 358999999999
Q ss_pred Ccc---------------chH---HHHHhhhcCCEEEEeCCCC
Q 030694 116 AVH---------------PLM---PLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 116 ~~~---------------~~~---~~~~~l~~~G~~v~~g~~~ 140 (173)
.+. .+. ..+..-+|.+.++.++++-
T Consensus 78 ~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~ 120 (306)
T cd05291 78 APQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPV 120 (306)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChH
Confidence 751 122 3333446778888887543
No 468
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.22 E-value=0.0022 Score=48.67 Aligned_cols=75 Identities=20% Similarity=0.261 Sum_probs=51.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc------CCC-EEeeCC----------ChHHHHHhcCC
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL------GAD-SFLVSR----------DQDEMQAAMGT 106 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~------g~~-~v~~~~----------~~~~~~~~~~~ 106 (173)
++|.|+|+|.+|...++.+...|.+|+++++++++.+.+.+.. +.. ..++.. ......+...+
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 81 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVAD 81 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhcC
Confidence 4799999999999999998889999999999999887765421 100 001100 00112233458
Q ss_pred ccEEEEcCCCcc
Q 030694 107 MDGIIDTVSAVH 118 (173)
Q Consensus 107 ~d~vid~~g~~~ 118 (173)
.|++|+|++...
T Consensus 82 aD~Vi~avpe~~ 93 (288)
T PRK09260 82 ADLVIEAVPEKL 93 (288)
T ss_pred CCEEEEeccCCH
Confidence 999999999873
No 469
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=97.22 E-value=0.00089 Score=51.00 Aligned_cols=124 Identities=32% Similarity=0.385 Sum_probs=72.8
Q ss_pred eeEECCCCCCcccccchhhHHHHHHH--HHHhhCCCCCCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHH
Q 030694 7 FVVRIPEGAPLDATAPLLCAGITVYS--PLRFYGLDKPGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAV 83 (173)
Q Consensus 7 ~~~~~p~~~~~~~aa~l~~~~~ta~~--~l~~~~~~~~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~ 83 (173)
.++.+++++.+-.. ....|... ++.+. .+++++||=+|+| .|.+++..++ +|+ +|++++.++.-.+.++
T Consensus 130 ~~I~idPg~AFGTG----~H~TT~lcl~~l~~~--~~~g~~vLDvG~G-SGILaiaA~k-lGA~~v~a~DiDp~Av~~a~ 201 (295)
T PF06325_consen 130 IVIEIDPGMAFGTG----HHPTTRLCLELLEKY--VKPGKRVLDVGCG-SGILAIAAAK-LGAKKVVAIDIDPLAVEAAR 201 (295)
T ss_dssp EEEEESTTSSS-SS----HCHHHHHHHHHHHHH--SSTTSEEEEES-T-TSHHHHHHHH-TTBSEEEEEESSCHHHHHHH
T ss_pred EEEEECCCCcccCC----CCHHHHHHHHHHHHh--ccCCCEEEEeCCc-HHHHHHHHHH-cCCCeEEEecCCHHHHHHHH
Confidence 44555555544433 24444332 33443 4788999999986 4555555555 687 8999999988777766
Q ss_pred HHc---C-CCEEeeCCChHHHHHhcCCccEEEEcCCCcc---chHHHHHhhhcCCEEEEeCCCCC
Q 030694 84 ERL---G-ADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH---PLMPLIGLLKSQGKLVLLGAPEK 141 (173)
Q Consensus 84 ~~~---g-~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~ 141 (173)
++. | .+.+......+. ..+++|+|+-+.-... ..+...++++++|.+++.|....
T Consensus 202 ~N~~~N~~~~~~~v~~~~~~---~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 202 ENAELNGVEDRIEVSLSEDL---VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE 263 (295)
T ss_dssp HHHHHTT-TTCEEESCTSCT---CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred HHHHHcCCCeeEEEEEeccc---ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence 632 2 222211111111 1268999997766552 23355678899999999997654
No 470
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=97.22 E-value=0.0033 Score=47.43 Aligned_cols=77 Identities=19% Similarity=0.302 Sum_probs=55.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcC---CC------EEeeCCChHHH--------HH
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLG---AD------SFLVSRDQDEM--------QA 102 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g---~~------~v~~~~~~~~~--------~~ 102 (173)
-.++.++|.|+ .++|.+.+..+...|++|+++.+++++.+.....+. .. ...|-...+.. ++
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 46788999998 899999999999999999999999998777665432 21 12233333222 22
Q ss_pred hcCCccEEEEcCCCc
Q 030694 103 AMGTMDGIIDTVSAV 117 (173)
Q Consensus 103 ~~~~~d~vid~~g~~ 117 (173)
..+++|+.+++.|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 245899999999875
No 471
>PRK06436 glycerate dehydrogenase; Provisional
Probab=97.21 E-value=0.0042 Score=47.58 Aligned_cols=85 Identities=19% Similarity=0.296 Sum_probs=58.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP-- 119 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~-- 119 (173)
.|+++.|+|.|.+|...++.++..|++|++.+++..+ .+..... ..++++....|+++.+++....
T Consensus 121 ~gktvgIiG~G~IG~~vA~~l~afG~~V~~~~r~~~~-------~~~~~~~-----~~l~ell~~aDiv~~~lp~t~~T~ 188 (303)
T PRK06436 121 YNKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVN-------DGISSIY-----MEPEDIMKKSDFVLISLPLTDETR 188 (303)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcc-------cCccccc-----CCHHHHHhhCCEEEECCCCCchhh
Confidence 5899999999999999999999999999999986321 1211111 1233445567888877775421
Q ss_pred ---hHHHHHhhhcCCEEEEeCC
Q 030694 120 ---LMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 120 ---~~~~~~~l~~~G~~v~~g~ 138 (173)
-...+..|+++..++.++.
T Consensus 189 ~li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 189 GMINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred cCcCHHHHhcCCCCeEEEECCC
Confidence 1255677777777777764
No 472
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=97.20 E-value=0.0049 Score=46.23 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=63.2
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHcC------CC--EEeeCCChHHHHHhcCCcc
Q 030694 39 LDKPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERLG------AD--SFLVSRDQDEMQAAMGTMD 108 (173)
Q Consensus 39 ~~~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~g------~~--~v~~~~~~~~~~~~~~~~d 108 (173)
.++++++||-+|+| .|..+..+++..+ .+|++++.+++-++.+++... .. .++..+..+ +.-..+.+|
T Consensus 70 ~~~~~~~VLDlGcG-tG~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~-lp~~~~sfD 147 (261)
T PLN02233 70 GAKMGDRVLDLCCG-SGDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD-LPFDDCYFD 147 (261)
T ss_pred CCCCCCEEEEECCc-CCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-CCCCCCCEe
Confidence 45789999999986 3556666777655 489999999998887765322 11 122211111 110123699
Q ss_pred EEEEcCCCc------cchHHHHHhhhcCCEEEEeCCC
Q 030694 109 GIIDTVSAV------HPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 109 ~vid~~g~~------~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.|+...+-. ..+..+.+.|+|||+++.+-..
T Consensus 148 ~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 148 AITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred EEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 997654322 2467888999999998877543
No 473
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0039 Score=46.32 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHH--HcCCC---EEeeCCChHHHHHh-------cCCcc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVE--RLGAD---SFLVSRDQDEMQAA-------MGTMD 108 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~-------~~~~d 108 (173)
++++++|+|+ |++|..+++.+...|++|++++++++..+...+ ..+.. ...|-.+.+.+.+. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 999999999999999999999988753333222 12322 12333443332222 24799
Q ss_pred EEEEcCCC
Q 030694 109 GIIDTVSA 116 (173)
Q Consensus 109 ~vid~~g~ 116 (173)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99999985
No 474
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=97.20 E-value=0.0037 Score=46.02 Aligned_cols=76 Identities=17% Similarity=0.310 Sum_probs=51.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCC--EE--eeCC--ChHH-------HHHh
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GAD--SF--LVSR--DQDE-------MQAA 103 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~--~v--~~~~--~~~~-------~~~~ 103 (173)
.++++++|.|+ |++|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|.. +.+. +.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 57889999998 99999999999889999999999887655443322 211 12 2222 2211 2222
Q ss_pred cCCccEEEEcCCC
Q 030694 104 MGTMDGIIDTVSA 116 (173)
Q Consensus 104 ~~~~d~vid~~g~ 116 (173)
.+++|.+|.+.|.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 3479999998875
No 475
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=97.20 E-value=0.0037 Score=48.35 Aligned_cols=87 Identities=14% Similarity=0.184 Sum_probs=57.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCcc--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAK-AMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~-~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~-- 118 (173)
.|+++.|+|.|.+|...++.++ ..|++|+..++.... +.... ++.... .++++....|++.-+++...
T Consensus 144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~-~~~~~-~~~~~~-------~l~ell~~sDvv~lh~plt~~T 214 (323)
T PRK15409 144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHK-EAEER-FNARYC-------DLDTLLQESDFVCIILPLTDET 214 (323)
T ss_pred CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCch-hhHHh-cCcEec-------CHHHHHHhCCEEEEeCCCChHH
Confidence 5799999999999999999998 899999988765322 11122 443211 13344556777776666431
Q ss_pred --c-hHHHHHhhhcCCEEEEeC
Q 030694 119 --P-LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 119 --~-~~~~~~~l~~~G~~v~~g 137 (173)
. -...+..|+++..+|.++
T Consensus 215 ~~li~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 215 HHLFGAEQFAKMKSSAIFINAG 236 (323)
T ss_pred hhccCHHHHhcCCCCeEEEECC
Confidence 1 125667777777776665
No 476
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.19 E-value=0.0074 Score=45.67 Aligned_cols=96 Identities=22% Similarity=0.315 Sum_probs=71.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHH--CCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChH
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKA--MGVKVTVISTSPSKKSEAVERLGADSFLVSRDQD 98 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~--~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~ 98 (173)
.+||+....+..+..+..--.|++++|+|. ..+|.-++.++.. .+++|++.-+....
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~-------------------- 196 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRD-------------------- 196 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCC--------------------
Confidence 468887777877877776567999999998 7889999888887 68888776543211
Q ss_pred HHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCCC
Q 030694 99 EMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 99 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
+.+.....|+++-++|.+..+. -..+++|..++.+|...
T Consensus 197 -l~~~~k~ADIvV~AvGkp~~i~--~~~ik~GavVIDvGin~ 235 (284)
T PRK14193 197 -LAAHTRRADIIVAAAGVAHLVT--ADMVKPGAAVLDVGVSR 235 (284)
T ss_pred -HHHHHHhCCEEEEecCCcCccC--HHHcCCCCEEEEccccc
Confidence 2233446799999999986443 34589999999999543
No 477
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0038 Score=46.21 Aligned_cols=75 Identities=16% Similarity=0.249 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcch-HHHHHHH---cCCCE---EeeCCChHHHHH-------hcCC
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSK-KSEAVER---LGADS---FLVSRDQDEMQA-------AMGT 106 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~-~~~~~~~---~g~~~---v~~~~~~~~~~~-------~~~~ 106 (173)
++++++|.|+ +++|..+++.+...|++|+++++++++ .+.+.+. .+... ..|-.+.+.+.+ ..++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 899999999999999999999987543 2333221 23221 123333332222 1247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 478
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.19 E-value=0.008 Score=45.53 Aligned_cols=96 Identities=18% Similarity=0.308 Sum_probs=70.8
Q ss_pred cchhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC----CCeEEEEeCCcchHHHHHHHcCCCEEeeCC
Q 030694 21 APLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAVERLGADSFLVSR 95 (173)
Q Consensus 21 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~----g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~ 95 (173)
.-+||+....+..+..+..--.|++++|+|. ..+|.=++.++... +++|++.-+...
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~------------------ 192 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSE------------------ 192 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCC------------------
Confidence 3567877777777877776578999999998 68899999998888 677776543221
Q ss_pred ChHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 96 DQDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 96 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
.+.+.....|+++-++|.+..+. -..+++|..++.+|..
T Consensus 193 ---~l~~~~~~ADIvV~AvG~p~~i~--~~~ik~GavVIDvGin 231 (287)
T PRK14181 193 ---NLTEILKTADIIIAAIGVPLFIK--EEMIAEKAVIVDVGTS 231 (287)
T ss_pred ---CHHHHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence 12233446799999999986544 3458999999999954
No 479
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.19 E-value=0.0026 Score=47.11 Aligned_cols=81 Identities=23% Similarity=0.402 Sum_probs=52.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcch-------------------HH----HHHHHcCCC-EE--eeC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPSK-------------------KS----EAVERLGAD-SF--LVS 94 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~~-------------------~~----~~~~~~g~~-~v--~~~ 94 (173)
.+.+|+|+|+|++|..+++.+.+.|. ++++++.+.-+ .+ .+++ ++.+ .+ ++.
T Consensus 23 ~~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~-inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQ-INPHIAINPINA 101 (240)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHH-HCCCcEEEEEec
Confidence 35789999999999999999999998 88887765322 11 2222 2221 11 111
Q ss_pred -CChHHHHHhcCCccEEEEcCCCccchHHHH
Q 030694 95 -RDQDEMQAAMGTMDGIIDTVSAVHPLMPLI 124 (173)
Q Consensus 95 -~~~~~~~~~~~~~d~vid~~g~~~~~~~~~ 124 (173)
-+.+...++..++|+++||+.+.. ....+
T Consensus 102 ~i~~~~~~~~~~~~DlVvd~~D~~~-~r~~l 131 (240)
T TIGR02355 102 KLDDAELAALIAEHDIVVDCTDNVE-VRNQL 131 (240)
T ss_pred cCCHHHHHHHhhcCCEEEEcCCCHH-HHHHH
Confidence 112334455668999999999885 34333
No 480
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=97.19 E-value=0.0039 Score=45.40 Aligned_cols=97 Identities=23% Similarity=0.256 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCC--CeEEEEeCCcchHHHHHHHc---CCCE---EeeC-CChHHHHH-hcCCccEE
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMG--VKVTVISTSPSKKSEAVERL---GADS---FLVS-RDQDEMQA-AMGTMDGI 110 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g--~~v~~~~~~~~~~~~~~~~~---g~~~---v~~~-~~~~~~~~-~~~~~d~v 110 (173)
+..+++|-+|.+ +|..+++++..+. .+++.+++++++.+.+++.+ |.+. ++.. +..+.+.+ ..+.||++
T Consensus 58 ~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~~~fDli 136 (219)
T COG4122 58 SGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLDGSFDLV 136 (219)
T ss_pred cCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccCCCccEE
Confidence 567899999864 4566666666665 48999999999999998855 4332 2221 33344443 34689999
Q ss_pred EEcCC-Cc--cchHHHHHhhhcCCEEEEeCC
Q 030694 111 IDTVS-AV--HPLMPLIGLLKSQGKLVLLGA 138 (173)
Q Consensus 111 id~~g-~~--~~~~~~~~~l~~~G~~v~~g~ 138 (173)
|-=.. .. ..++.+++.|++||.++.-..
T Consensus 137 FIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 137 FIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred EEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 74333 32 357789999999999886653
No 481
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.18 E-value=0.003 Score=46.79 Aligned_cols=75 Identities=19% Similarity=0.301 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-E--EeeCCChHHHHH-------hcCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-S--FLVSRDQDEMQA-------AMGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~-------~~~~~ 107 (173)
.+++++|.|+ +++|...++.+...|++++++++++++.+.+.+. .+.+ . ..|-.+.+.+.+ ..+++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4789999998 9999999999999999999999887766554332 2322 1 234444433322 12479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999884
No 482
>PLN00015 protochlorophyllide reductase
Probab=97.18 E-value=0.0068 Score=46.41 Aligned_cols=70 Identities=21% Similarity=0.230 Sum_probs=49.3
Q ss_pred EEEcC-ChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHcCC--CE----EeeCCChHHHHH----h---cCCccEEE
Q 030694 47 GVVGL-GGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERLGA--DS----FLVSRDQDEMQA----A---MGTMDGII 111 (173)
Q Consensus 47 lI~G~-g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~g~--~~----v~~~~~~~~~~~----~---~~~~d~vi 111 (173)
+|.|+ +++|+.+++.+...| ++|+++++++++.+.+.+.++. .. ..|-.+.+.+++ + .+++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 47888 899999999998899 8999999988877666554431 11 234444433222 2 24799999
Q ss_pred EcCCC
Q 030694 112 DTVSA 116 (173)
Q Consensus 112 d~~g~ 116 (173)
++.|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 99985
No 483
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=97.18 E-value=0.005 Score=46.95 Aligned_cols=89 Identities=24% Similarity=0.238 Sum_probs=58.2
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-------EeeCCChHHHHHhcCCccEEEEcCCCc
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-------FLVSRDQDEMQAAMGTMDGIIDTVSAV 117 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-------v~~~~~~~~~~~~~~~~d~vid~~g~~ 117 (173)
+|+|+|+|.+|...+..+...|.+|+.+++ +++.+.+++ .|... .+.........+....+|++|-|+...
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~~ 79 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRE-RGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKAY 79 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCCceEEEec-HHHHHHHHh-CCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEeccc
Confidence 689999999999888888888999999999 777777766 45211 000000111122235799999999877
Q ss_pred cchHHHHHhhh----cCCEEEEe
Q 030694 118 HPLMPLIGLLK----SQGKLVLL 136 (173)
Q Consensus 118 ~~~~~~~~~l~----~~G~~v~~ 136 (173)
. +...+..++ ++..++.+
T Consensus 80 ~-~~~~~~~l~~~~~~~~~ii~~ 101 (305)
T PRK12921 80 Q-LDAAIPDLKPLVGEDTVIIPL 101 (305)
T ss_pred C-HHHHHHHHHhhcCCCCEEEEe
Confidence 3 555555554 44455555
No 484
>PRK07578 short chain dehydrogenase; Provisional
Probab=97.18 E-value=0.011 Score=42.01 Aligned_cols=84 Identities=19% Similarity=0.262 Sum_probs=55.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHh---cCCccEEEEcCCCcc--
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAA---MGTMDGIIDTVSAVH-- 118 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~---~~~~d~vid~~g~~~-- 118 (173)
+++|.|+ |++|...++.+... .+|+.+++++.. ...|-.+.+.+++. .+++|+++.+.|...
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~~~ 69 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKVGKVDAVVSAAGKVHFA 69 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 6899998 89999988887777 899999887531 12344443333332 247999999988521
Q ss_pred -----------------------chHHHHHhhhcCCEEEEeCCCC
Q 030694 119 -----------------------PLMPLIGLLKSQGKLVLLGAPE 140 (173)
Q Consensus 119 -----------------------~~~~~~~~l~~~G~~v~~g~~~ 140 (173)
..+..++.++++|+++.++...
T Consensus 70 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~ 114 (199)
T PRK07578 70 PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGIL 114 (199)
T ss_pred chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccc
Confidence 1223345566789988887544
No 485
>PRK04266 fibrillarin; Provisional
Probab=97.18 E-value=0.0079 Score=44.16 Aligned_cols=98 Identities=17% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCCCCCCEEEEEcCChHHHHHHHHHHHCC-CeEEEEeCCcchHHHHHHHc---CCCEEeeCCChH--HHHHhcCCccEEE
Q 030694 38 GLDKPGMHVGVVGLGGLGHVAVKFAKAMG-VKVTVISTSPSKKSEAVERL---GADSFLVSRDQD--EMQAAMGTMDGII 111 (173)
Q Consensus 38 ~~~~~g~~vlI~G~g~~G~~a~~~~~~~g-~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~--~~~~~~~~~d~vi 111 (173)
..++++++|+=+|+| .|..+..+++..+ .+|++++.+++.++.+.+.. ..-..+..+..+ ....+.+.+|+++
T Consensus 68 l~i~~g~~VlD~G~G-~G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~ 146 (226)
T PRK04266 68 FPIKKGSKVLYLGAA-SGTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIY 146 (226)
T ss_pred CCCCCCCEEEEEccC-CCHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEE
Confidence 455899999999985 2444455555543 48999999998766554421 111222222111 1112334699999
Q ss_pred EcCCCcc----chHHHHHhhhcCCEEEEe
Q 030694 112 DTVSAVH----PLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 112 d~~g~~~----~~~~~~~~l~~~G~~v~~ 136 (173)
.....+. .+..+.+.|+|||+++..
T Consensus 147 ~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 147 QDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred ECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 6555432 256777899999998883
No 486
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=97.17 E-value=0.0038 Score=44.67 Aligned_cols=93 Identities=14% Similarity=0.106 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHc---CCCEEeeCCChHHHHHhcCCccEEEEcCCC-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERL---GADSFLVSRDQDEMQAAMGTMDGIIDTVSA- 116 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~---g~~~v~~~~~~~~~~~~~~~~d~vid~~g~- 116 (173)
.++.+||-+|+| .|..+..+++ .|++|++++.+++-.+.+++.. +........+... ....+.+|+++.+..-
T Consensus 29 ~~~~~vLDiGcG-~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~~~fD~I~~~~~~~ 105 (195)
T TIGR00477 29 VAPCKTLDLGCG-QGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINA-AALNEDYDFIFSTVVFM 105 (195)
T ss_pred CCCCcEEEeCCC-CCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchh-ccccCCCCEEEEecccc
Confidence 456789999986 4666666665 5889999999988766665422 2210011011110 0123479999865321
Q ss_pred -------ccchHHHHHhhhcCCEEEEe
Q 030694 117 -------VHPLMPLIGLLKSQGKLVLL 136 (173)
Q Consensus 117 -------~~~~~~~~~~l~~~G~~v~~ 136 (173)
+..+..+.+.|+|||.++.+
T Consensus 106 ~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 106 FLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred cCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 12456778899999985544
No 487
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=97.17 E-value=0.0042 Score=46.53 Aligned_cols=86 Identities=22% Similarity=0.284 Sum_probs=59.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHCC---CeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccch
Q 030694 44 MHVGVVGLGGLGHVAVKFAKAMG---VKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHPL 120 (173)
Q Consensus 44 ~~vlI~G~g~~G~~a~~~~~~~g---~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~ 120 (173)
.++.|+|+|.+|...++.....| .+|+++++++++.+.+.+.+|.. +. .+ ..+.....|++|-|+... .+
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~g~~-~~-~~----~~~~~~~advVil~v~~~-~~ 75 (267)
T PRK11880 3 KKIGFIGGGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEYGVR-AA-TD----NQEAAQEADVVVLAVKPQ-VM 75 (267)
T ss_pred CEEEEEechHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCCe-ec-CC----hHHHHhcCCEEEEEcCHH-HH
Confidence 46899999999999888877777 68999999988888777745642 21 11 112234789999998776 46
Q ss_pred HHHHHhhhcC--CEEEEe
Q 030694 121 MPLIGLLKSQ--GKLVLL 136 (173)
Q Consensus 121 ~~~~~~l~~~--G~~v~~ 136 (173)
...++.+++. ..++.+
T Consensus 76 ~~v~~~l~~~~~~~vvs~ 93 (267)
T PRK11880 76 EEVLSELKGQLDKLVVSI 93 (267)
T ss_pred HHHHHHHHhhcCCEEEEe
Confidence 6666666553 344444
No 488
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=97.16 E-value=0.0028 Score=52.30 Aligned_cols=94 Identities=19% Similarity=0.097 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCEEeeCCChHHHHHhcCCccEEEEcCCCccc-
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADSFLVSRDQDEMQAAMGTMDGIIDTVSAVHP- 119 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~- 119 (173)
..+++++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+ ..+......|++++|++....
T Consensus 377 ~~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~--~~~~~~~~~diiINtT~vGm~~ 453 (529)
T PLN02520 377 LAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLAD--LENFHPEEGMILANTTSVGMQP 453 (529)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhH--hhhhccccCeEEEecccCCCCC
Confidence 3478999999999999999999999999999999988888777656532 222211 111112357889988865410
Q ss_pred ----hHHHHHhhhcCCEEEEeC
Q 030694 120 ----LMPLIGLLKSQGKLVLLG 137 (173)
Q Consensus 120 ----~~~~~~~l~~~G~~v~~g 137 (173)
..-....+++.+.++.+-
T Consensus 454 ~~~~~pl~~~~l~~~~~v~D~v 475 (529)
T PLN02520 454 NVDETPISKHALKHYSLVFDAV 475 (529)
T ss_pred CCCCCcccHhhCCCCCEEEEec
Confidence 011224466666666664
No 489
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.16 E-value=0.0032 Score=46.25 Aligned_cols=75 Identities=20% Similarity=0.300 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCC-EE--eeCCChHHHHHh-------cCCc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGAD-SF--LVSRDQDEMQAA-------MGTM 107 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~-------~~~~ 107 (173)
+++++||.|+ |.+|..+++.+...|++|++++++.++...+.+. .+.. .+ .|..+.+.+++. .+++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4688999998 9999999999999999999999988776655442 2221 12 233333332222 2479
Q ss_pred cEEEEcCCC
Q 030694 108 DGIIDTVSA 116 (173)
Q Consensus 108 d~vid~~g~ 116 (173)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 490
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=97.16 E-value=0.0019 Score=49.41 Aligned_cols=71 Identities=20% Similarity=0.243 Sum_probs=53.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCCE-EeeCCChHHHHHhcCCccEEEEcCCC
Q 030694 45 HVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGADS-FLVSRDQDEMQAAMGTMDGIIDTVSA 116 (173)
Q Consensus 45 ~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~~-v~~~~~~~~~~~~~~~~d~vid~~g~ 116 (173)
+++|.|+ |.+|..+++.+...|.+|+++++++++...+.. .+... ..|..+.+.+.+...++|++|.+.+.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG-LDVEIVEGDLRDPASLRKAVAGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc-CCceEEEeeCCCHHHHHHHHhCCCEEEEecee
Confidence 6899998 999999999999999999999998776543333 34332 23555556666666789999998864
No 491
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.15 E-value=0.0036 Score=47.98 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCc----------chHHHHHHH---cCCCE---EeeCCChHHHH---
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSP----------SKKSEAVER---LGADS---FLVSRDQDEMQ--- 101 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~----------~~~~~~~~~---~g~~~---v~~~~~~~~~~--- 101 (173)
.+++++|.|+ +++|+.+++.+...|++|+++++++ ++.+.+.+. .|... ..|-.+.+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4789999998 8999999999999999999999873 333333221 33221 12333333222
Q ss_pred -Hh---cCCccEEEEcC-C
Q 030694 102 -AA---MGTMDGIIDTV-S 115 (173)
Q Consensus 102 -~~---~~~~d~vid~~-g 115 (173)
++ .+++|++|++. |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 22 25799999998 6
No 492
>PRK06046 alanine dehydrogenase; Validated
Probab=97.15 E-value=0.0054 Score=47.52 Aligned_cols=100 Identities=22% Similarity=0.325 Sum_probs=66.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHH-HCCC-eEEEEeCCcchHHHHHHHcC----CCEEeeCCChHHHHHhcCCccEEEEcC
Q 030694 41 KPGMHVGVVGLGGLGHVAVKFAK-AMGV-KVTVISTSPSKKSEAVERLG----ADSFLVSRDQDEMQAAMGTMDGIIDTV 114 (173)
Q Consensus 41 ~~g~~vlI~G~g~~G~~a~~~~~-~~g~-~v~~~~~~~~~~~~~~~~~g----~~~v~~~~~~~~~~~~~~~~d~vid~~ 114 (173)
+...++.|+|+|..|...++... ..+. +|.++++++++.+.+.+++. ....+ ..+ .++... .|+|+.|+
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~~~---~~~~l~-aDiVv~aT 201 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-AED---IEEACD-CDILVTTT 201 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-eCC---HHHHhh-CCEEEEec
Confidence 56788999999999988877665 3456 78888999888877766543 22111 222 222334 89999999
Q ss_pred CCccchHHHHHhhhcCCEEEEeCCCC-CCcccC
Q 030694 115 SAVHPLMPLIGLLKSQGKLVLLGAPE-KPLELP 146 (173)
Q Consensus 115 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~ 146 (173)
+....+ -....+++|-.+..+|... +...++
T Consensus 202 ps~~P~-~~~~~l~~g~hV~~iGs~~p~~~El~ 233 (326)
T PRK06046 202 PSRKPV-VKAEWIKEGTHINAIGADAPGKQELD 233 (326)
T ss_pred CCCCcE-ecHHHcCCCCEEEecCCCCCccccCC
Confidence 976422 2234578988888999654 333444
No 493
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.15 E-value=0.0034 Score=46.52 Aligned_cols=74 Identities=16% Similarity=0.182 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH----cCCC--EE--eeCCChHHHHH----h---cCC
Q 030694 43 GMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER----LGAD--SF--LVSRDQDEMQA----A---MGT 106 (173)
Q Consensus 43 g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~----~g~~--~v--~~~~~~~~~~~----~---~~~ 106 (173)
+++++|.|+ |.+|...++.+...|++|+.++++.++.+.+.+. .+.. .. .|-.+.+.+.+ + .++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999998 8999999999999999999999987766554332 2211 11 23333332222 2 247
Q ss_pred ccEEEEcCCC
Q 030694 107 MDGIIDTVSA 116 (173)
Q Consensus 107 ~d~vid~~g~ 116 (173)
+|.++.+.|.
T Consensus 82 id~vv~~ag~ 91 (259)
T PRK12384 82 VDLLVYNAGI 91 (259)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 494
>PRK08264 short chain dehydrogenase; Validated
Probab=97.15 E-value=0.0037 Score=45.68 Aligned_cols=71 Identities=25% Similarity=0.322 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHCCC-eEEEEeCCcchHHHHHHHcCCC-E--EeeCCChHHHHHhc---CCccEEEEc
Q 030694 42 PGMHVGVVGL-GGLGHVAVKFAKAMGV-KVTVISTSPSKKSEAVERLGAD-S--FLVSRDQDEMQAAM---GTMDGIIDT 113 (173)
Q Consensus 42 ~g~~vlI~G~-g~~G~~a~~~~~~~g~-~v~~~~~~~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~~---~~~d~vid~ 113 (173)
.+++++|+|+ |.+|..+++.+...|+ +|+++++++++.+. .+.. . ..|-.+.+.+.+.. +.+|++|.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 5678999998 9999999999999999 99999998776543 2211 1 13444444433332 368999999
Q ss_pred CCC
Q 030694 114 VSA 116 (173)
Q Consensus 114 ~g~ 116 (173)
.|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 987
No 495
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0035 Score=45.46 Aligned_cols=72 Identities=21% Similarity=0.245 Sum_probs=52.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHHcCCC-EEeeCCChHHHHH----hc-CCccEEEEcCCC
Q 030694 44 MHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVERLGAD-SFLVSRDQDEMQA----AM-GTMDGIIDTVSA 116 (173)
Q Consensus 44 ~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~~g~~-~v~~~~~~~~~~~----~~-~~~d~vid~~g~ 116 (173)
++++|+|+ |++|...++.+...|++|+++++++++.+.+.. .+.. ...|-.+.+.+.. +. +++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-LGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-ccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47899998 999999999888899999999999887777665 4532 2334444443333 22 269999998876
No 496
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.14 E-value=0.0065 Score=44.57 Aligned_cols=82 Identities=17% Similarity=0.332 Sum_probs=61.6
Q ss_pred EEEEEcCChHHHHHHHHHHHCCCeEEEEeCCcchHHH-HHHHcCCCE-EeeCCChHHHHHh-cCCccEEEEcCCCccchH
Q 030694 45 HVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPSKKSE-AVERLGADS-FLVSRDQDEMQAA-MGTMDGIIDTVSAVHPLM 121 (173)
Q Consensus 45 ~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~-~~~~~g~~~-v~~~~~~~~~~~~-~~~~d~vid~~g~~~~~~ 121 (173)
+++|+|+|.+|...++.+...|..|+.+++++++.+. +.++++... ..+..+.+.+.+. ...+|+++=++|... .+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N 80 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN 80 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence 6889999999999999999999999999999998777 333344332 3455566777666 358999999999863 44
Q ss_pred HHHHhh
Q 030694 122 PLIGLL 127 (173)
Q Consensus 122 ~~~~~l 127 (173)
..+-++
T Consensus 81 ~i~~~l 86 (225)
T COG0569 81 SVLALL 86 (225)
T ss_pred HHHHHH
Confidence 444333
No 497
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=97.14 E-value=0.0075 Score=45.36 Aligned_cols=99 Identities=26% Similarity=0.427 Sum_probs=58.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCC-eEEEEeCCcc-------------------hHHHHHHH---cCCC-EEeeCC--
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGV-KVTVISTSPS-------------------KKSEAVER---LGAD-SFLVSR-- 95 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~-~v~~~~~~~~-------------------~~~~~~~~---~g~~-~v~~~~-- 95 (173)
.+.+|+|+|+|++|..++..+.+.|. ++++++.+.- |.+.+.+. ++.+ .+....
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 56889999999999999999999996 8988886522 11122121 2221 121111
Q ss_pred -ChHHHHHhc-CCccEEEEcCCCccchHHHHHhhh-cCCEEEEeCCCC
Q 030694 96 -DQDEMQAAM-GTMDGIIDTVSAVHPLMPLIGLLK-SQGKLVLLGAPE 140 (173)
Q Consensus 96 -~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~ 140 (173)
..+...++. .++|+||||......-..+....+ .+=.++.+|...
T Consensus 109 i~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGag 156 (268)
T PRK15116 109 ITPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAG 156 (268)
T ss_pred cChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCcc
Confidence 123333343 479999999998633333333333 344566665443
No 498
>PRK06932 glycerate dehydrogenase; Provisional
Probab=97.13 E-value=0.0021 Score=49.55 Aligned_cols=34 Identities=35% Similarity=0.546 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHCCCeEEEEeCC
Q 030694 42 PGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTS 75 (173)
Q Consensus 42 ~g~~vlI~G~g~~G~~a~~~~~~~g~~v~~~~~~ 75 (173)
.|+++.|+|.|.+|...++.++..|++|++.++.
T Consensus 146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~ 179 (314)
T PRK06932 146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHK 179 (314)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCC
Confidence 5789999999999999999999999999998764
No 499
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.13 E-value=0.0087 Score=45.59 Aligned_cols=95 Identities=18% Similarity=0.202 Sum_probs=70.3
Q ss_pred chhhHHHHHHHHHHhhCCCCCCCEEEEEcC-ChHHHHHHHHHHHC----CCeEEEEeCCcchHHHHHHHcCCCEEeeCCC
Q 030694 22 PLLCAGITVYSPLRFYGLDKPGMHVGVVGL-GGLGHVAVKFAKAM----GVKVTVISTSPSKKSEAVERLGADSFLVSRD 96 (173)
Q Consensus 22 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G~-g~~G~~a~~~~~~~----g~~v~~~~~~~~~~~~~~~~~g~~~v~~~~~ 96 (173)
-.||+....+..+..+..--.|++++|+|. ..+|.=++.++... +++|++.-+....
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~------------------ 197 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDD------------------ 197 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCC------------------
Confidence 457777777777777776678999999998 78899998888877 7788775332211
Q ss_pred hHHHHHhcCCccEEEEcCCCccchHHHHHhhhcCCEEEEeCCC
Q 030694 97 QDEMQAAMGTMDGIIDTVSAVHPLMPLIGLLKSQGKLVLLGAP 139 (173)
Q Consensus 97 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 139 (173)
+.+.....|+++-++|-+..+.. ..+++|..++.+|..
T Consensus 198 ---l~~~~~~ADIvIsAvGkp~~i~~--~~ik~gaiVIDvGin 235 (297)
T PRK14167 198 ---LAAKTRRADIVVAAAGVPELIDG--SMLSEGATVIDVGIN 235 (297)
T ss_pred ---HHHHHhhCCEEEEccCCcCccCH--HHcCCCCEEEEcccc
Confidence 22234467999999999865543 568999999999943
No 500
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0061 Score=45.76 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=52.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHCCCeEEEEeCCcchHHHHHHH---cCCCE-E--eeCCChHHHHHh-------cCC
Q 030694 41 KPGMHVGVVGL-GGLGHVAVKFAKAMGVKVTVISTSPSKKSEAVER---LGADS-F--LVSRDQDEMQAA-------MGT 106 (173)
Q Consensus 41 ~~g~~vlI~G~-g~~G~~a~~~~~~~g~~v~~~~~~~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~-------~~~ 106 (173)
.+.++++|.|+ |.+|..+++.+...|++|++++++.++...+... .+... . .|-.+.+.+.+. .++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 34578999998 9999999999999999999999887765544332 23221 1 243443333221 247
Q ss_pred ccEEEEcCCCc
Q 030694 107 MDGIIDTVSAV 117 (173)
Q Consensus 107 ~d~vid~~g~~ 117 (173)
+|.+|.+.|..
T Consensus 88 id~vi~~Ag~~ 98 (274)
T PRK07775 88 IEVLVSGAGDT 98 (274)
T ss_pred CCEEEECCCcC
Confidence 89999999863
Done!