BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030695
MSRATVELDFFGLENKENSSNKPQFKKFPRQRSFRDIQGAISKINPEIIKSVIASGSAKS
SISLPSTPKEEPITFPDVPLYRHIPKSGSENVSETAPLTIFYNGTVAVFDVHREKAEHIL
KLAVEGNSKSFESNDANVASDQQQQLLETLNTGDLPIARRKSLQRFLEKRKER

High Scoring Gene Products

Symbol, full name Information P value
JAZ10
jasmonate-zim-domain protein 10
protein from Arabidopsis thaliana 1.2e-40
JAZ11
jasmonate-zim-domain protein 11
protein from Arabidopsis thaliana 1.7e-08
JAZ3
jasmonate-zim-domain protein 3
protein from Arabidopsis thaliana 1.4e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030695
        (173 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2183921 - symbol:JAZ10 "jasmonate-zim-domain p...   432  1.2e-40   1
TAIR|locus:2098179 - symbol:JAZ11 "jasmonate-zim-domain p...   131  1.7e-08   1
TAIR|locus:2088530 - symbol:JAZ3 "jasmonate-zim-domain pr...    86  1.4e-05   2


>TAIR|locus:2183921 [details] [associations]
            symbol:JAZ10 "jasmonate-zim-domain protein 10"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0009753 "response to jasmonic acid stimulus"
            evidence=IEP;RCA;IMP] [GO:0009611 "response to wounding"
            evidence=IEP;RCA;IMP] [GO:0009733 "response to auxin stimulus"
            evidence=RCA;IMP] [GO:0009751 "response to salicylic acid stimulus"
            evidence=IMP] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:2000022 "regulation of jasmonic acid mediated
            signaling pathway" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0010112 "regulation of systemic acquired
            resistance" evidence=IEP] [GO:0007165 "signal transduction"
            evidence=RCA] [GO:0009414 "response to water deprivation"
            evidence=RCA] [GO:0009620 "response to fungus" evidence=RCA]
            [GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA]
            [GO:0009723 "response to ethylene stimulus" evidence=RCA]
            [GO:0009738 "abscisic acid mediated signaling pathway"
            evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
            pathway" evidence=RCA] [GO:0042538 "hyperosmotic salinity response"
            evidence=RCA] InterPro:IPR018467 Pfam:PF09425 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006952 GO:GO:0009753
            GO:GO:0009611 GO:GO:0006355 GO:GO:0006351 EMBL:AL163491
            GO:GO:0010112 InterPro:IPR010399 Pfam:PF06200 SMART:SM00979
            PROSITE:PS51320 GO:GO:2000022 KO:K13464 EMBL:AY056444 EMBL:AY081715
            EMBL:BX833870 IPI:IPI00518593 IPI:IPI00542220 PIR:T48569
            RefSeq:NP_568287.1 RefSeq:NP_974775.1 RefSeq:NP_974776.1
            UniGene:At.26324 DIP:DIP-53276N IntAct:Q93ZM9 STRING:Q93ZM9
            EnsemblPlants:AT5G13220.1 GeneID:831162 KEGG:ath:AT5G13220
            TAIR:At5g13220 eggNOG:NOG298014 HOGENOM:HOG000240764
            InParanoid:Q93ZM9 OMA:ESSMETD PhylomeDB:Q93ZM9
            ProtClustDB:CLSN2689641 Genevestigator:Q93ZM9 Uniprot:Q93ZM9
        Length = 197

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 103/186 (55%), Positives = 132/186 (70%)

Query:     1 MSRATVELDFFGLENKE-NSSNKPQFKKF-PRQRSFRDIQGAISKINPEIIKSVIAS--- 55
             MS+AT+ELDF GLE K+ N++ KP+F+KF  R+RSFRDIQGAISKI+PEIIKS++AS   
Sbjct:     1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLASTGN 60

Query:    56 ---GSAKSSISLPSTPKEEPITFPDVPLYRHIPKSGSENVSETAPLTIFYNGTVAVFDVH 112
                 SAKS  S+PSTP+E+    P  P++  + +S +E VS T P+TIFYNG+V+VF V 
Sbjct:    61 NSDSSAKSR-SVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQVS 119

Query:   113 REKAEHILKLAVEGNSKSFESN---DANVA--SDQQQQLLETLNTGDLPIARRKSLQRFL 167
             R KA  I+K+A E  SK  ES+   D +V   +  + +L      GDLPIARRKSLQRFL
Sbjct:   120 RNKAGEIMKVANEAASKKDESSMETDLSVILPTTLRPKLFGQNLEGDLPIARRKSLQRFL 179

Query:   168 EKRKER 173
             EKRKER
Sbjct:   180 EKRKER 185


>TAIR|locus:2098179 [details] [associations]
            symbol:JAZ11 "jasmonate-zim-domain protein 11"
            species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR018467
            Pfam:PF09425 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0006952 GO:GO:0006355 GO:GO:0006351 EMBL:AL138644
            InterPro:IPR010399 Pfam:PF06200 SMART:SM00979 PROSITE:PS51320
            KO:K13464 EMBL:BT015154 EMBL:BT015661 IPI:IPI00522213 PIR:T47386
            RefSeq:NP_189930.1 UniGene:At.36272 DIP:DIP-53278N IntAct:Q9M246
            PRIDE:Q9M246 DNASU:823426 EnsemblPlants:AT3G43440.1 GeneID:823426
            KEGG:ath:AT3G43440 TAIR:At3g43440 eggNOG:NOG307482
            HOGENOM:HOG000154575 OMA:VPAQKVQ PhylomeDB:Q9M246
            ProtClustDB:CLSN2913508 Genevestigator:Q9M246 Uniprot:Q9M246
        Length = 238

 Score = 131 (51.2 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 33/98 (33%), Positives = 54/98 (55%)

Query:    77 DVPLYRHIPKSGSENVSETAPLTIFYNGTVAVFD-VHREKAEHILKLAVEGNSKSFESND 135
             D+ + R I ++ S     +  LTI + G+  VF+ V  +K + I+++A  G     ++ +
Sbjct:    25 DLLVERSIHEARSTEPDASTQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGK----QTKN 80

Query:   136 ANVASDQQQQLLETLNTGDLPIARRKSLQRFLEKRKER 173
                 +    + L      DLPIARR+SLQRFLEKR++R
Sbjct:    81 VTGINPALNRALSFSTVADLPIARRRSLQRFLEKRRDR 118

 Score = 121 (47.7 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 31/83 (37%), Positives = 46/83 (55%)

Query:    98 LTIFYNGTVAVFD-VHREKAEHILKLAVEGNS-KSFESNDANVA-----SDQQQQLLETL 150
             LTI + G+ +VFD +  EK + IL +A    + ++      N A     S      +  +
Sbjct:   132 LTIIFGGSFSVFDGIPAEKVQEILHIAAAAKATETINLTSINPALKRAISFSNASTVACV 191

Query:   151 NTGDLPIARRKSLQRFLEKRKER 173
             +T D+PIARR+SLQRF EKR+ R
Sbjct:   192 STADVPIARRRSLQRFFEKRRHR 214


>TAIR|locus:2088530 [details] [associations]
            symbol:JAZ3 "jasmonate-zim-domain protein 3" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0009867 "jasmonic acid mediated signaling pathway"
            evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0042802 "identical protein binding" evidence=IPI] [GO:0031347
            "regulation of defense response" evidence=IMP] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009695 "jasmonic acid
            biosynthetic process" evidence=RCA] InterPro:IPR018467 Pfam:PF09425
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952
            GO:GO:0006355 GO:GO:0006351 GO:GO:0009867 GO:GO:0031347
            InterPro:IPR010399 Pfam:PF06200 SMART:SM00979 PROSITE:PS51320
            EMBL:AB019230 KO:K13464 HOGENOM:HOG000015145 EMBL:AY085082
            EMBL:AF372907 EMBL:BT003044 EMBL:AK222169 IPI:IPI00520031
            RefSeq:NP_001078174.1 RefSeq:NP_566590.1 UniGene:At.8035
            DIP:DIP-40532N IntAct:Q9LVI4 STRING:Q9LVI4
            EnsemblPlants:AT3G17860.1 GeneID:821055 KEGG:ath:AT3G17860
            TAIR:At3g17860 eggNOG:NOG306561 InParanoid:Q9LVI4 OMA:MAPPISI
            PhylomeDB:Q9LVI4 ProtClustDB:CLSN2688504 Genevestigator:Q9LVI4
            Uniprot:Q9LVI4
        Length = 352

 Score = 86 (35.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
 Identities = 20/44 (45%), Positives = 29/44 (65%)

Query:    86 KSGSENVSETAPLTIFYNGTVAVFD-VHREKAEHILKLAVEGNS 128
             +S S+ +   A LTIFY G+V V+D +  EKA+ I+ LA  G+S
Sbjct:   167 RSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSS 210

 Score = 75 (31.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
 Identities = 15/19 (78%), Positives = 17/19 (89%)

Query:   155 LPIARRKSLQRFLEKRKER 173
             LP+AR+ SL RFLEKRKER
Sbjct:   301 LPLARKASLARFLEKRKER 319


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.129   0.350    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       173   0.00097  108 3  11 23  0.47    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  513 (55 KB)
  Total size of DFA:  119 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.74u 0.18s 21.92t   Elapsed:  00:00:01
  Total cpu time:  21.74u 0.18s 21.92t   Elapsed:  00:00:01
  Start:  Mon May 20 18:24:53 2013   End:  Mon May 20 18:24:54 2013

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