Query 030695
Match_columns 173
No_of_seqs 129 out of 300
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 04:30:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030695.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/030695hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e29a1 d.58.7.5 (A:8-92) ATP- 68.8 1 7.3E-05 30.9 1.7 31 93-123 44-74 (85)
2 d1dfna_ g.9.1.1 (A:) Defensin 41.2 8.9 0.00065 21.2 2.3 16 94-109 13-28 (30)
3 d1aisa2 d.129.1.1 (A:93-181) T 28.7 22 0.0016 23.3 3.2 29 94-122 52-81 (89)
4 d2pgda2 c.2.1.6 (A:1-176) 6-ph 24.9 18 0.0013 25.3 2.2 20 105-124 27-46 (176)
5 d1qnaa1 d.129.1.1 (A:17-115) T 23.0 41 0.003 22.3 3.7 27 95-121 52-79 (99)
6 d1uiya_ c.14.1.3 (A:) Enoyl-Co 22.0 15 0.0011 27.0 1.3 14 159-172 238-251 (253)
7 d1aisa1 d.129.1.1 (A:1-92) TAT 22.0 52 0.0038 21.4 4.1 29 94-122 53-82 (92)
8 d1pgja2 c.2.1.6 (A:1-178) 6-ph 20.1 29 0.0021 23.9 2.6 20 105-124 26-45 (178)
9 d2fw2a1 c.14.1.3 (A:3-260) Chr 19.4 18 0.0013 27.1 1.3 14 159-172 243-256 (258)
10 d1nzya_ c.14.1.3 (A:) 4-Chloro 19.1 17 0.0012 27.3 1.1 13 160-172 246-258 (269)
No 1
>d2e29a1 d.58.7.5 (A:8-92) ATP-dependent RNA helicase DDX50 {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.76 E-value=1 Score=30.89 Aligned_cols=31 Identities=16% Similarity=0.213 Sum_probs=27.0
Q ss_pred CCCCceeEEECcEEEEEeCCHHHHHHHHHHH
Q 030695 93 SETAPLTIFYNGTVAVFDVHREKAEHILKLA 123 (173)
Q Consensus 93 ~~t~qLTIFY~G~V~VfDv~~~KA~~Im~lA 123 (173)
..-.-||+.=+|.=+|||||.+.++.|..--
T Consensus 44 ~~I~~M~l~kd~~GavFDVpse~~~~i~~~W 74 (85)
T d2e29a1 44 SQITRMCLLKGNMGVCFDVPTTESERLQAEW 74 (85)
T ss_dssp TTCEEEEECTTSSEEEEEEEHHHHHHHHHHC
T ss_pred HhhheeEEecCCCEEEEeccHHHHHHHHHHh
Confidence 3456899999999999999999999998654
No 2
>d1dfna_ g.9.1.1 (A:) Defensin HNP-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.17 E-value=8.9 Score=21.16 Aligned_cols=16 Identities=31% Similarity=0.374 Sum_probs=12.8
Q ss_pred CCCceeEEECcEEEEE
Q 030695 94 ETAPLTIFYNGTVAVF 109 (173)
Q Consensus 94 ~t~qLTIFY~G~V~Vf 109 (173)
+..-=|-||.|+|..|
T Consensus 13 errygtc~y~gr~waf 28 (30)
T d1dfna_ 13 ERRYGTCIYQGRLWAF 28 (30)
T ss_dssp CCEEEEEEETTEEEEE
T ss_pred ccceeeEEEeceEeee
Confidence 4455699999999887
No 3
>d1aisa2 d.129.1.1 (A:93-181) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=28.68 E-value=22 Score=23.26 Aligned_cols=29 Identities=10% Similarity=0.180 Sum_probs=23.3
Q ss_pred CCCceeEEECcEEEEEe-CCHHHHHHHHHH
Q 030695 94 ETAPLTIFYNGTVAVFD-VHREKAEHILKL 122 (173)
Q Consensus 94 ~t~qLTIFY~G~V~VfD-v~~~KA~~Im~l 122 (173)
....+.||..|+|++-. -+.+.++..+..
T Consensus 52 p~~t~lIF~SGKivitGaks~~~~~~a~~~ 81 (89)
T d1aisa2 52 PKSVILLFSSGKIVCSGAKSEADAWEAVRK 81 (89)
T ss_dssp TTEEEEECTTSEEEEEEESSHHHHHHHHHH
T ss_pred CcEEEEEEcCCEEEEEccCCHHHHHHHHHH
Confidence 34689999999999998 788888665543
No 4
>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}
Probab=24.91 E-value=18 Score=25.32 Aligned_cols=20 Identities=20% Similarity=0.288 Sum_probs=16.8
Q ss_pred EEEEEeCCHHHHHHHHHHHh
Q 030695 105 TVAVFDVHREKAEHILKLAV 124 (173)
Q Consensus 105 ~V~VfDv~~~KA~~Im~lA~ 124 (173)
+|+|||.+++|++++.....
T Consensus 27 ~V~v~dr~~~~~~~l~~~~~ 46 (176)
T d2pgda2 27 VVCAFNRTVSKVDDFLANEA 46 (176)
T ss_dssp CEEEECSSTHHHHHHHHTTT
T ss_pred eEEEEcCCHHHHHHHHHhcc
Confidence 69999999999998876543
No 5
>d1qnaa1 d.129.1.1 (A:17-115) TATA-box binding protein (TBP), C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.03 E-value=41 Score=22.33 Aligned_cols=27 Identities=11% Similarity=0.173 Sum_probs=21.8
Q ss_pred CCceeEEECcEEEEEe-CCHHHHHHHHH
Q 030695 95 TAPLTIFYNGTVAVFD-VHREKAEHILK 121 (173)
Q Consensus 95 t~qLTIFY~G~V~VfD-v~~~KA~~Im~ 121 (173)
...+.||.+|+|.+-- -+.+.|+..+.
T Consensus 52 ~~t~lIF~SGKivitGaks~~~~~~a~~ 79 (99)
T d1qnaa1 52 KTTALIFASGKMVCTGAKSEDFSKMAAR 79 (99)
T ss_dssp TEEEEEETTSEEEEEEESSHHHHHHHHH
T ss_pred cEEEEEEcCCEEEEeccCCHHHHHHHHH
Confidence 4789999999999997 78887755443
No 6
>d1uiya_ c.14.1.3 (A:) Enoyl-CoA hydratase (crotonase) {Thermus thermophilus [TaxId: 274]}
Probab=21.97 E-value=15 Score=26.95 Aligned_cols=14 Identities=29% Similarity=0.522 Sum_probs=11.4
Q ss_pred HHHHhHHHHHhhcC
Q 030695 159 RRKSLQRFLEKRKE 172 (173)
Q Consensus 159 RKaSLqRFLEKRKe 172 (173)
.+..++-|+||||=
T Consensus 238 ~~egi~af~eKR~P 251 (253)
T d1uiya_ 238 LAEGIRAFFEKRPP 251 (253)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHhCCCCC
Confidence 46678999999984
No 7
>d1aisa1 d.129.1.1 (A:1-92) TATA-box binding protein (TBP), C-terminal domain {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=21.96 E-value=52 Score=21.38 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=23.2
Q ss_pred CCCceeEEECcEEEEEe-CCHHHHHHHHHH
Q 030695 94 ETAPLTIFYNGTVAVFD-VHREKAEHILKL 122 (173)
Q Consensus 94 ~t~qLTIFY~G~V~VfD-v~~~KA~~Im~l 122 (173)
....++||..|+|.+-- =+.+.++..+..
T Consensus 53 p~~~~lIF~sGkivitGakS~~~~~~a~~~ 82 (92)
T d1aisa1 53 PKVALLIFSSGKLVVTGAKSVQDIERAVAK 82 (92)
T ss_dssp SCCEEEECTTSEEEEEEESSHHHHHHHHHH
T ss_pred CcEEEEEECCCEEEEEccCCHHHHHHHHHH
Confidence 45789999999999998 688888665543
No 8
>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}
Probab=20.12 E-value=29 Score=23.89 Aligned_cols=20 Identities=35% Similarity=0.476 Sum_probs=17.3
Q ss_pred EEEEEeCCHHHHHHHHHHHh
Q 030695 105 TVAVFDVHREKAEHILKLAV 124 (173)
Q Consensus 105 ~V~VfDv~~~KA~~Im~lA~ 124 (173)
.|++||..++|++++...-.
T Consensus 26 ~V~~~dr~~~~~~~l~~~~~ 45 (178)
T d1pgja2 26 KVAVFNRTYSKSEEFMKANA 45 (178)
T ss_dssp CEEEECSSHHHHHHHHHHTT
T ss_pred eEEEEECCHHHHHHHHHcCC
Confidence 58999999999999987654
No 9
>d2fw2a1 c.14.1.3 (A:3-260) Chromodomain protein CDY2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.44 E-value=18 Score=27.09 Aligned_cols=14 Identities=14% Similarity=0.442 Sum_probs=11.4
Q ss_pred HHHHhHHHHHhhcC
Q 030695 159 RRKSLQRFLEKRKE 172 (173)
Q Consensus 159 RKaSLqRFLEKRKe 172 (173)
.+..+..|+||||-
T Consensus 243 ~~Egi~af~EKR~p 256 (258)
T d2fw2a1 243 GIESMLKYVENKID 256 (258)
T ss_dssp HHHHHHHHHHSSCC
T ss_pred HHHHHHHHhCCCCC
Confidence 46778899999984
No 10
>d1nzya_ c.14.1.3 (A:) 4-Chlorobenzoyl-CoA dehalogenase {Pseudomonas sp., strain CBS-3 [TaxId: 306]}
Probab=19.14 E-value=17 Score=27.28 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=10.6
Q ss_pred HHHhHHHHHhhcC
Q 030695 160 RKSLQRFLEKRKE 172 (173)
Q Consensus 160 KaSLqRFLEKRKe 172 (173)
+..+.+||||||-
T Consensus 246 ~e~v~aflekrkp 258 (269)
T d1nzya_ 246 MPCLTRFLDGHRA 258 (269)
T ss_dssp HHHHHHHHTTCCT
T ss_pred HHHHHHHHCCCCC
Confidence 5567899999984
Done!