BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>030696
MDSTLRMASSIVLPIYPSYSPKLNHGSINSCKVGYGFQFSVCGSSRRICAVSPNGSVSPS
ACGGSESSSTGNEQRRRSSLESLFRYDRPIPEERIEKPIGLSLSEKVIGDNPRCTECKAK
GAVLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCAECGGRGHCGPK

High Scoring Gene Products

Symbol, full name Information P value
AT5G17840 protein from Arabidopsis thaliana 2.6e-40
AT2G24860 protein from Arabidopsis thaliana 1.0e-05
AT3G47650 protein from Arabidopsis thaliana 0.00037
AT1G22630 protein from Arabidopsis thaliana 0.00068

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  030696
        (173 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2175966 - symbol:AT5G17840 species:3702 "Arabi...   429  2.6e-40   1
TAIR|locus:2047426 - symbol:AT2G24860 species:3702 "Arabi...   104  1.0e-05   1
TAIR|locus:2079132 - symbol:AT3G47650 species:3702 "Arabi...    95  0.00037   1
TAIR|locus:2009482 - symbol:AT1G22630 species:3702 "Arabi...    86  0.00068   1


>TAIR|locus:2175966 [details] [associations]
            symbol:AT5G17840 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM] [GO:0031072 "heat shock
            protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] InterPro:IPR001305 EMBL:CP002688
            SUPFAM:SSF57938 EMBL:AY056279 EMBL:AY091430 EMBL:AY085721
            IPI:IPI00518478 RefSeq:NP_197286.1 UniGene:At.26340
            ProteinModelPortal:Q93ZT2 SMR:Q93ZT2 IntAct:Q93ZT2
            EnsemblPlants:AT5G17840.1 GeneID:831652 KEGG:ath:AT5G17840
            TAIR:At5g17840 InParanoid:Q93ZT2 OMA:DKSVPEE PhylomeDB:Q93ZT2
            ProtClustDB:CLSN2916305 ArrayExpress:Q93ZT2 Genevestigator:Q93ZT2
            Uniprot:Q93ZT2
        Length = 154

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 87/146 (59%), Positives = 108/146 (73%)

Query:    28 INSCKVGYGFQFSVCG-SSR-RICAVSPNGXXXXXXXXXXXXXXXXNEQRRRSSLESLFR 85
             + S  VG G + +  G SSR R+C++ P+                 +  R+RSSLES+F 
Sbjct:    15 VKSSSVG-GHRIASPGFSSRLRLCSLPPSSSIKAESCLKR------DVHRQRSSLESMFC 67

Query:    86 YDRPIPEERIEKPIGLSLSEKVIGDNPRCTECKAKGAVLCATCSGSGLYVDSILESQGII 145
             YD+PIPEE IE+P+GLS+SE+ IGDN RCT C+AKGA+LC+TCSG+GLYVDSI+ESQGII
Sbjct:    68 YDKPIPEEIIEEPVGLSMSEREIGDNQRCTCCEAKGALLCSTCSGTGLYVDSIMESQGII 127

Query:   146 VKVRCLGCGGTGNIMCAECGGRGHCG 171
             VKVRCLGCGG+GNIMC  CGGRGH G
Sbjct:   128 VKVRCLGCGGSGNIMCKLCGGRGHVG 153


>TAIR|locus:2047426 [details] [associations]
            symbol:AT2G24860 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0031072 "heat
            shock protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] InterPro:IPR001305 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006585 SUPFAM:SSF57938
            EMBL:AF410290 EMBL:AY097372 EMBL:AY088871 EMBL:AK176284
            IPI:IPI00520827 PIR:D84641 RefSeq:NP_565578.1 UniGene:At.13979
            ProteinModelPortal:Q9SK46 SMR:Q9SK46 IntAct:Q9SK46 STRING:Q9SK46
            EnsemblPlants:AT2G24860.1 GeneID:817023 KEGG:ath:AT2G24860
            TAIR:At2g24860 eggNOG:NOG286430 HOGENOM:HOG000153500
            InParanoid:Q9SK46 OMA:GHVECKW PhylomeDB:Q9SK46
            ProtClustDB:CLSN2688396 ArrayExpress:Q9SK46 Genevestigator:Q9SK46
            Uniprot:Q9SK46
        Length = 144

 Score = 104 (41.7 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 20/57 (35%), Positives = 32/57 (56%)

Query:   114 CTECKAKGAVLCATCSGSGLYV--DSILESQGIIVKVRCLGCGGTGNIMCAECGGRG 168
             C+ C +KG V C  C+G+G ++  D++L  Q       C+ C G G+  C++C G G
Sbjct:    76 CSSCNSKGHVECKWCAGTGFFILGDNML-CQVPSRNTSCVICSGQGSASCSDCKGTG 131


>TAIR|locus:2079132 [details] [associations]
            symbol:AT3G47650 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0031072 "heat shock
            protein binding" evidence=IEA] [GO:0051082 "unfolded protein
            binding" evidence=IEA] [GO:0006098 "pentose-phosphate shunt"
            evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
            [GO:0009657 "plastid organization" evidence=RCA] [GO:0009773
            "photosynthetic electron transport in photosystem I" evidence=RCA]
            [GO:0010207 "photosystem II assembly" evidence=RCA] [GO:0019288
            "isopentenyl diphosphate biosynthetic process,
            mevalonate-independent pathway" evidence=RCA] InterPro:IPR001305
            GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF57938 EMBL:AL132955 EMBL:AF370246 EMBL:AY062972
            IPI:IPI00546027 PIR:T45725 RefSeq:NP_190349.1 UniGene:At.23492
            ProteinModelPortal:Q9SN73 SMR:Q9SN73 STRING:Q9SN73 PaxDb:Q9SN73
            PRIDE:Q9SN73 ProMEX:Q9SN73 EnsemblPlants:AT3G47650.1 GeneID:823919
            KEGG:ath:AT3G47650 TAIR:At3g47650 eggNOG:NOG323241
            HOGENOM:HOG000241823 InParanoid:Q9SN73 OMA:ANSLCFF PhylomeDB:Q9SN73
            ProtClustDB:CLSN2719659 ArrayExpress:Q9SN73 Genevestigator:Q9SN73
            Uniprot:Q9SN73
        Length = 136

 Score = 95 (38.5 bits), Expect = 0.00037, P = 0.00037
 Identities = 17/58 (29%), Positives = 25/58 (43%)

Query:   114 CTECKAKGAVLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCAECGGRGHCG 171
             C  C+ +G V C+ C G G+ +      Q       C  C G   ++C +C G G  G
Sbjct:    72 CANCEGEGCVACSQCKGGGVNLIDHFNGQ-FKAGALCWLCRGKKEVLCGDCNGAGFIG 128


>TAIR|locus:2009482 [details] [associations]
            symbol:AT1G22630 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=IDA] [GO:0000023 "maltose
            metabolic process" evidence=RCA] [GO:0006098 "pentose-phosphate
            shunt" evidence=RCA] [GO:0019252 "starch biosynthetic process"
            evidence=RCA] InterPro:IPR001305 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0009507 EMBL:AC006551
            Gene3D:2.10.230.10 EMBL:AY045605 EMBL:AY090329 IPI:IPI00537283
            RefSeq:NP_564175.2 UniGene:At.24666 ProteinModelPortal:Q9SKA5
            SMR:Q9SKA5 IntAct:Q9SKA5 STRING:Q9SKA5 PaxDb:Q9SKA5 PRIDE:Q9SKA5
            EnsemblPlants:AT1G22630.1 GeneID:838869 KEGG:ath:AT1G22630
            TAIR:At1g22630 eggNOG:NOG309889 HOGENOM:HOG000077683
            InParanoid:Q9SKA5 OMA:PLCCSEL PhylomeDB:Q9SKA5
            ProtClustDB:CLSN2690418 Genevestigator:Q9SKA5 Uniprot:Q9SKA5
        Length = 110

 Score = 86 (35.3 bits), Expect = 0.00068, P = 0.00068
 Identities = 18/55 (32%), Positives = 26/55 (47%)

Query:   114 CTECKAKGAVLCATCSGSGLYVDSILESQGIIVKVRCLGCGGTGNIMCAECGGRG 168
             C  C AKGA+ C  C G+G       ++  +  + +C  C G G   C +CG  G
Sbjct:    51 CETCGAKGAIECPGCKGTG----KNKKNGNMFERWKCFDCQGFGMKSCPKCGKGG 101


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.138   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      173       157   0.00079  106 3  11 22  0.36    32
                                                     30  0.42    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  565 (60 KB)
  Total size of DFA:  143 KB (2087 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.88u 0.14s 14.02t   Elapsed:  00:00:00
  Total cpu time:  13.88u 0.14s 14.02t   Elapsed:  00:00:00
  Start:  Thu May  9 16:46:16 2013   End:  Thu May  9 16:46:16 2013

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