Query 030700
Match_columns 173
No_of_seqs 116 out of 1084
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 04:37:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030700.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/030700hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dr2_A Exported gluconolactona 99.9 1.1E-22 3.6E-27 152.6 19.7 166 1-172 37-208 (305)
2 2fp8_A Strictosidine synthase; 99.9 6.1E-23 2.1E-27 155.0 18.0 166 5-172 14-205 (322)
3 3sre_A PON1, serum paraoxonase 99.9 1.2E-20 4E-25 144.3 16.6 163 6-172 46-241 (355)
4 3e5z_A Putative gluconolactona 99.9 9.8E-20 3.4E-24 135.4 18.8 164 2-172 21-191 (296)
5 3g4e_A Regucalcin; six bladed 99.9 6.4E-20 2.2E-24 137.0 17.8 161 2-172 5-169 (297)
6 3a9g_A Putative uncharacterize 99.8 4.5E-19 1.6E-23 135.9 16.8 164 1-172 21-217 (354)
7 2ism_A Putative oxidoreductase 99.8 9.5E-19 3.3E-23 134.0 16.6 165 1-172 23-222 (352)
8 3v65_B Low-density lipoprotein 99.8 5.4E-18 1.8E-22 131.3 18.2 148 3-172 110-266 (386)
9 3v64_C Agrin; beta propeller, 99.8 7.7E-18 2.6E-22 128.8 18.5 147 4-172 68-223 (349)
10 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 7.9E-18 2.7E-22 125.4 17.9 164 2-171 11-195 (314)
11 1ijq_A LDL receptor, low-densi 99.8 2.9E-17 1E-21 124.0 20.0 146 4-172 25-184 (316)
12 3p5b_L Low density lipoprotein 99.8 2.8E-17 9.7E-22 127.9 19.6 147 3-172 106-266 (400)
13 3sov_A LRP-6, low-density lipo 99.8 1.4E-17 4.6E-22 126.0 16.4 142 9-172 34-186 (318)
14 3fvz_A Peptidyl-glycine alpha- 99.8 4.6E-17 1.6E-21 123.1 19.4 166 4-172 85-311 (329)
15 4hw6_A Hypothetical protein, I 99.8 1.5E-17 5.1E-22 130.7 17.1 140 8-172 137-293 (433)
16 4a0p_A LRP6, LRP-6, low-densit 99.8 4.2E-17 1.4E-21 133.4 19.9 144 8-172 35-186 (628)
17 1npe_A Nidogen, entactin; glyc 99.8 6.2E-17 2.1E-21 118.9 18.6 144 9-172 35-187 (267)
18 3fvz_A Peptidyl-glycine alpha- 99.8 7.2E-17 2.5E-21 122.0 18.2 147 8-172 22-216 (329)
19 3tc9_A Hypothetical hydrolase; 99.8 4.3E-17 1.5E-21 127.9 17.1 141 8-172 135-290 (430)
20 2p4o_A Hypothetical protein; p 99.8 8.9E-17 3E-21 120.5 18.1 139 10-172 32-187 (306)
21 3das_A Putative oxidoreductase 99.8 1.2E-16 4.2E-21 121.7 18.7 163 2-172 25-221 (347)
22 3g4e_A Regucalcin; six bladed 99.8 6.6E-17 2.3E-21 120.6 16.6 143 9-171 97-261 (297)
23 3s94_A LRP-6, low-density lipo 99.8 1.3E-16 4.4E-21 130.3 19.6 144 8-172 38-191 (619)
24 2dg1_A DRP35, lactonase; beta 99.7 2.6E-16 9E-21 118.4 19.3 148 9-171 44-201 (333)
25 3m0c_C LDL receptor, low-densi 99.7 1.9E-16 6.6E-21 132.1 19.9 148 3-172 418-578 (791)
26 2ghs_A AGR_C_1268P; regucalcin 99.7 2.1E-16 7.2E-21 119.5 17.7 155 2-172 41-199 (326)
27 3sov_A LRP-6, low-density lipo 99.7 1.4E-16 4.8E-21 120.4 16.5 141 8-172 77-227 (318)
28 3hrp_A Uncharacterized protein 99.7 5.3E-16 1.8E-20 121.0 19.5 146 8-172 217-399 (409)
29 1ijq_A LDL receptor, low-densi 99.7 9.4E-16 3.2E-20 115.7 19.0 145 4-172 71-227 (316)
30 1q7f_A NHL, brain tumor CG1071 99.7 8.7E-16 3E-20 113.3 18.3 145 4-171 115-269 (286)
31 1cru_A Protein (soluble quinop 99.7 2.7E-16 9.3E-21 124.1 16.4 167 2-172 20-247 (454)
32 3s94_A LRP-6, low-density lipo 99.7 7.7E-16 2.6E-20 125.7 19.4 144 8-172 347-499 (619)
33 3v64_C Agrin; beta propeller, 99.7 8.1E-16 2.8E-20 117.6 18.1 146 3-172 109-264 (349)
34 3tc9_A Hypothetical hydrolase; 99.7 3.7E-16 1.3E-20 122.6 16.5 145 9-172 225-419 (430)
35 2g8s_A Glucose/sorbosone dehyd 99.7 1.8E-16 6.2E-21 121.4 14.1 164 2-172 11-217 (353)
36 1q7f_A NHL, brain tumor CG1071 99.7 1.6E-15 5.3E-20 111.9 18.6 142 6-171 26-182 (286)
37 3v65_B Low-density lipoprotein 99.7 1E-15 3.6E-20 118.5 17.7 145 4-172 153-307 (386)
38 1npe_A Nidogen, entactin; glyc 99.7 2.5E-15 8.7E-20 110.3 18.9 143 6-172 75-227 (267)
39 3p5b_L Low density lipoprotein 99.7 1.7E-15 5.9E-20 117.8 18.9 146 3-172 152-309 (400)
40 3hrp_A Uncharacterized protein 99.7 2.1E-15 7.1E-20 117.6 19.3 145 7-172 128-287 (409)
41 3dr2_A Exported gluconolactona 99.7 2.4E-15 8.2E-20 112.5 18.6 137 9-171 130-296 (305)
42 2p9w_A MAL S 1 allergenic prot 99.7 7.1E-16 2.4E-20 116.0 15.2 146 9-171 12-204 (334)
43 3e5z_A Putative gluconolactona 99.7 6.4E-15 2.2E-19 109.3 20.1 139 9-171 114-276 (296)
44 1rwi_B Serine/threonine-protei 99.7 3.5E-15 1.2E-19 108.9 17.5 142 8-172 106-253 (270)
45 4hw6_A Hypothetical protein, I 99.7 1.8E-15 6.1E-20 118.9 16.7 145 9-172 227-422 (433)
46 1rwi_B Serine/threonine-protei 99.7 3.9E-15 1.3E-19 108.6 17.1 138 11-171 25-168 (270)
47 3m0c_C LDL receptor, low-densi 99.7 4.3E-15 1.5E-19 124.1 18.7 146 3-172 464-621 (791)
48 3dsm_A Uncharacterized protein 99.7 7.8E-15 2.7E-19 111.0 17.9 148 9-171 83-244 (328)
49 2qe8_A Uncharacterized protein 99.7 1E-14 3.4E-19 110.9 18.2 153 2-172 10-215 (343)
50 4a0p_A LRP6, LRP-6, low-densit 99.7 1.1E-14 3.8E-19 119.1 19.1 143 3-171 73-225 (628)
51 1n7d_A LDL receptor, low-densi 99.7 5.2E-16 1.8E-20 128.4 11.3 142 9-172 405-560 (699)
52 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.7E-14 9.1E-19 106.2 17.3 146 9-172 116-288 (314)
53 3kya_A Putative phosphatase; s 99.6 1.3E-14 4.3E-19 115.2 16.2 145 9-172 246-464 (496)
54 2qc5_A Streptogramin B lactona 99.6 8.7E-14 3E-18 102.5 19.8 140 8-171 18-164 (300)
55 2fp8_A Strictosidine synthase; 99.6 3.2E-14 1.1E-18 107.1 17.3 148 8-171 124-301 (322)
56 2qc5_A Streptogramin B lactona 99.6 1.1E-13 3.6E-18 102.0 19.5 139 9-171 103-248 (300)
57 2z2n_A Virginiamycin B lyase; 99.6 1.4E-13 4.7E-18 101.4 19.6 139 9-171 14-159 (299)
58 2z2n_A Virginiamycin B lyase; 99.6 9E-14 3.1E-18 102.4 18.5 139 9-171 56-201 (299)
59 2iwa_A Glutamine cyclotransfer 99.6 9.4E-14 3.2E-18 102.2 16.7 141 9-170 65-224 (266)
60 2dg1_A DRP35, lactonase; beta 99.6 1.3E-13 4.5E-18 103.6 17.5 144 10-171 135-299 (333)
61 1n7d_A LDL receptor, low-densi 99.6 2.2E-14 7.5E-19 118.7 13.6 141 8-172 451-603 (699)
62 3kya_A Putative phosphatase; s 99.6 1.5E-13 5.2E-18 109.0 16.8 143 6-172 135-330 (496)
63 2ghs_A AGR_C_1268P; regucalcin 99.6 4E-13 1.4E-17 101.4 17.0 141 10-171 134-291 (326)
64 3dsm_A Uncharacterized protein 99.5 2.6E-13 8.9E-18 102.6 15.4 135 10-170 131-285 (328)
65 3nol_A Glutamine cyclotransfer 99.5 1.2E-12 4E-17 95.7 17.6 139 10-170 87-243 (262)
66 2p4o_A Hypothetical protein; p 99.5 3.9E-13 1.3E-17 100.6 14.9 136 9-171 116-277 (306)
67 3hfq_A Uncharacterized protein 99.5 1E-12 3.5E-17 99.2 17.0 145 9-171 39-206 (347)
68 3nok_A Glutaminyl cyclase; bet 99.5 1.5E-12 5E-17 95.3 17.1 139 10-170 96-253 (268)
69 2wg3_C Hedgehog-interacting pr 99.5 1.6E-13 5.5E-18 108.4 12.6 168 1-171 6-242 (463)
70 3vgz_A Uncharacterized protein 99.5 3.6E-12 1.2E-16 95.8 18.4 142 11-171 142-291 (353)
71 2qe8_A Uncharacterized protein 99.5 2.3E-12 7.8E-17 97.9 17.0 142 10-171 120-309 (343)
72 3mbr_X Glutamine cyclotransfer 99.5 6.9E-12 2.3E-16 90.8 17.9 139 10-170 65-222 (243)
73 3vgz_A Uncharacterized protein 99.5 6.5E-12 2.2E-16 94.4 18.6 139 10-172 185-334 (353)
74 3scy_A Hypothetical bacterial 99.5 1.5E-11 5E-16 93.4 19.7 146 11-171 156-325 (361)
75 3u4y_A Uncharacterized protein 99.5 6.5E-12 2.2E-16 93.9 16.6 142 10-171 83-240 (331)
76 4a9v_A PHOX; hydrolase, beta-p 99.4 8.6E-13 2.9E-17 105.4 11.1 153 4-170 378-549 (592)
77 3u4y_A Uncharacterized protein 99.4 6E-11 2.1E-15 88.6 19.6 141 10-171 128-292 (331)
78 3hfq_A Uncharacterized protein 99.4 4.7E-11 1.6E-15 90.0 18.5 145 9-171 85-259 (347)
79 2ism_A Putative oxidoreductase 99.4 7.6E-12 2.6E-16 95.7 13.4 144 8-172 133-334 (352)
80 2iwa_A Glutamine cyclotransfer 99.3 3.4E-10 1.2E-14 83.2 17.3 140 4-170 15-168 (266)
81 1l0q_A Surface layer protein; 99.3 3.9E-10 1.3E-14 86.0 18.4 139 10-171 32-177 (391)
82 1jof_A Carboxy-CIS,CIS-muconat 99.3 1E-10 3.5E-15 89.3 15.0 144 9-171 39-212 (365)
83 3sre_A PON1, serum paraoxonase 99.3 1.2E-11 4E-16 94.6 9.3 104 3-111 158-284 (355)
84 1jof_A Carboxy-CIS,CIS-muconat 99.3 1.8E-10 6.1E-15 87.9 15.8 144 11-171 84-274 (365)
85 3a9g_A Putative uncharacterize 99.3 1.3E-10 4.6E-15 88.9 14.9 144 8-171 133-330 (354)
86 1l0q_A Surface layer protein; 99.3 5.7E-10 1.9E-14 85.1 18.4 137 11-170 75-218 (391)
87 1ri6_A Putative isomerase YBHE 99.3 9.3E-10 3.2E-14 82.0 18.1 142 10-171 38-197 (343)
88 1pby_B Quinohemoprotein amine 99.2 2.5E-10 8.7E-15 84.9 14.4 134 11-170 35-192 (337)
89 1nir_A Nitrite reductase; hemo 99.2 3.7E-10 1.3E-14 90.9 15.8 142 12-171 181-343 (543)
90 1jmx_B Amine dehydrogenase; ox 99.2 7.2E-10 2.5E-14 82.9 16.1 98 11-111 44-165 (349)
91 3bws_A Protein LP49; two-domai 99.2 1.5E-09 5.1E-14 83.9 18.2 139 10-171 212-364 (433)
92 1ri6_A Putative isomerase YBHE 99.2 8.8E-10 3E-14 82.2 16.3 143 11-171 85-250 (343)
93 3bws_A Protein LP49; two-domai 99.2 2.2E-09 7.4E-14 82.9 17.9 153 10-171 254-420 (433)
94 3c75_H MADH, methylamine dehyd 99.2 1.2E-09 4E-14 85.5 16.3 67 10-78 119-207 (426)
95 2p9w_A MAL S 1 allergenic prot 99.2 1.6E-09 5.3E-14 81.7 15.5 143 10-171 63-253 (334)
96 3scy_A Hypothetical bacterial 99.2 2.7E-09 9.2E-14 80.8 16.8 143 9-171 49-230 (361)
97 1pby_B Quinohemoprotein amine 99.2 3.4E-09 1.2E-13 78.7 17.0 135 25-169 6-152 (337)
98 2oiz_A Aromatic amine dehydrog 99.1 4.9E-09 1.7E-13 80.1 17.1 67 10-78 51-138 (361)
99 1jmx_B Amine dehydrogenase; ox 99.1 1.9E-09 6.5E-14 80.6 14.1 149 13-169 3-164 (349)
100 2mad_H Methylamine dehydrogena 99.1 1.2E-08 4E-13 78.5 18.6 68 10-80 67-156 (373)
101 1qks_A Cytochrome CD1 nitrite 99.1 5.4E-09 1.8E-13 84.6 16.7 145 10-171 197-361 (567)
102 3sjl_D Methylamine dehydrogena 99.1 5.1E-09 1.7E-13 80.8 15.6 135 17-170 40-206 (386)
103 3qqz_A Putative uncharacterize 99.1 3.7E-08 1.3E-12 72.0 18.2 141 9-169 69-240 (255)
104 2ece_A 462AA long hypothetical 99.1 2.6E-08 8.9E-13 78.0 18.1 142 12-171 190-400 (462)
105 3no2_A Uncharacterized protein 99.1 6.3E-08 2.2E-12 71.4 19.3 137 10-167 37-180 (276)
106 3das_A Putative oxidoreductase 99.0 1.8E-08 6.2E-13 76.7 15.9 143 9-172 139-327 (347)
107 3c75_H MADH, methylamine dehyd 99.0 1.3E-08 4.5E-13 79.6 15.3 133 20-170 83-246 (426)
108 2ymu_A WD-40 repeat protein; u 99.0 3.9E-08 1.3E-12 78.6 17.8 137 10-169 427-567 (577)
109 1nir_A Nitrite reductase; hemo 99.0 1.2E-08 4.1E-13 82.2 14.7 134 16-170 144-298 (543)
110 3qqz_A Putative uncharacterize 99.0 1.4E-07 4.7E-12 68.9 18.8 148 4-169 21-190 (255)
111 3no2_A Uncharacterized protein 99.0 9.5E-08 3.3E-12 70.5 18.1 135 12-171 79-231 (276)
112 1fwx_A Nitrous oxide reductase 99.0 4.4E-09 1.5E-13 84.8 11.5 141 11-172 196-408 (595)
113 3hxj_A Pyrrolo-quinoline quino 99.0 9.4E-08 3.2E-12 71.1 18.1 132 12-170 179-312 (330)
114 2hqs_A Protein TOLB; TOLB, PAL 99.0 4.7E-08 1.6E-12 76.0 17.0 140 10-170 179-329 (415)
115 1mda_H Methylamine dehydrogena 99.0 1.3E-08 4.3E-13 78.3 13.5 64 3-70 61-144 (368)
116 1gxr_A ESG1, transducin-like e 99.0 1.4E-07 4.8E-12 69.9 18.8 138 10-170 184-325 (337)
117 3hxj_A Pyrrolo-quinoline quino 99.0 1E-07 3.4E-12 70.9 17.6 133 12-170 139-272 (330)
118 2ymu_A WD-40 repeat protein; u 99.0 9.7E-08 3.3E-12 76.3 18.4 138 10-170 386-527 (577)
119 2ojh_A Uncharacterized protein 98.9 9.2E-08 3.2E-12 69.3 16.3 139 10-170 42-191 (297)
120 2hqs_A Protein TOLB; TOLB, PAL 98.9 1E-07 3.5E-12 74.0 17.2 138 11-170 224-372 (415)
121 3ow8_A WD repeat-containing pr 98.9 3.7E-07 1.3E-11 68.4 18.4 135 11-169 166-308 (321)
122 3ow8_A WD repeat-containing pr 98.9 7.5E-07 2.6E-11 66.7 19.9 138 10-170 123-267 (321)
123 1gxr_A ESG1, transducin-like e 98.9 6.6E-07 2.2E-11 66.2 18.7 138 10-170 98-243 (337)
124 3zwu_A Alkaline phosphatase PH 98.8 3.2E-08 1.1E-12 80.1 11.7 74 91-169 473-548 (592)
125 3nol_A Glutamine cyclotransfer 98.8 1.5E-07 5.1E-12 68.7 14.1 129 10-170 43-188 (262)
126 1qks_A Cytochrome CD1 nitrite 98.8 1.6E-07 5.4E-12 76.1 15.6 131 18-169 164-315 (567)
127 4h5i_A Guanine nucleotide-exch 98.8 3.7E-07 1.3E-11 69.6 17.0 140 11-169 178-330 (365)
128 3nok_A Glutaminyl cyclase; bet 98.8 2.1E-07 7.3E-12 68.0 14.4 130 9-170 54-197 (268)
129 2ecf_A Dipeptidyl peptidase IV 98.8 1.7E-07 6E-12 77.2 15.7 137 10-170 37-227 (741)
130 2g8s_A Glucose/sorbosone dehyd 98.8 3.6E-08 1.2E-12 75.3 10.7 118 40-170 9-147 (353)
131 2ece_A 462AA long hypothetical 98.8 3.1E-07 1.1E-11 72.0 15.8 147 9-172 137-341 (462)
132 1got_B GT-beta; complex (GTP-b 98.8 7E-07 2.4E-11 67.2 17.0 141 10-169 185-330 (340)
133 2ojh_A Uncharacterized protein 98.8 4.3E-07 1.5E-11 65.7 15.0 139 10-170 85-235 (297)
134 4ery_A WD repeat-containing pr 98.8 2.6E-06 8.8E-11 62.9 19.3 139 9-170 23-168 (312)
135 2oiz_A Aromatic amine dehydrog 98.8 2.7E-07 9.2E-12 70.5 14.3 87 55-165 259-361 (361)
136 3v9f_A Two-component system se 98.7 5.7E-07 1.9E-11 75.1 16.6 136 10-169 450-599 (781)
137 3mbr_X Glutamine cyclotransfer 98.7 1.9E-06 6.6E-11 62.3 17.0 130 9-170 20-166 (243)
138 1xfd_A DIP, dipeptidyl aminope 98.7 9.7E-08 3.3E-12 78.5 11.6 139 10-170 17-191 (723)
139 3v9f_A Two-component system se 98.7 1E-06 3.4E-11 73.6 17.8 136 10-169 495-644 (781)
140 2aq5_A Coronin-1A; WD40 repeat 98.7 2.1E-06 7.2E-11 65.8 18.3 143 10-170 132-286 (402)
141 4a2l_A BT_4663, two-component 98.7 1.1E-06 3.6E-11 73.6 17.9 133 11-169 499-647 (795)
142 2mad_H Methylamine dehydrogena 98.7 1.1E-06 3.7E-11 67.6 16.6 111 17-146 28-161 (373)
143 2z3z_A Dipeptidyl aminopeptida 98.7 1.3E-06 4.3E-11 71.8 18.0 145 11-171 182-375 (706)
144 1fwx_A Nitrous oxide reductase 98.7 7.7E-07 2.6E-11 71.9 15.8 148 20-171 100-296 (595)
145 1cru_A Protein (soluble quinop 98.7 2.4E-07 8.4E-12 73.0 12.7 123 40-170 18-161 (454)
146 3fm0_A Protein CIAO1; WDR39,SG 98.7 3E-06 1E-10 63.9 18.2 142 10-170 62-213 (345)
147 2ynn_A Coatomer subunit beta'; 98.7 2.4E-06 8.3E-11 63.2 17.4 140 7-169 11-159 (304)
148 4a2l_A BT_4663, two-component 98.7 1.7E-06 5.9E-11 72.3 18.3 137 12-170 359-515 (795)
149 3sjl_D Methylamine dehydrogena 98.7 3.2E-07 1.1E-11 70.8 12.7 125 15-162 231-384 (386)
150 2z3z_A Dipeptidyl aminopeptida 98.7 8.5E-07 2.9E-11 72.8 16.1 157 10-170 82-276 (706)
151 1z68_A Fibroblast activation p 98.7 2.1E-07 7.3E-12 76.6 12.5 136 11-170 17-187 (719)
152 1erj_A Transcriptional repress 98.7 3.9E-06 1.3E-10 64.3 18.5 137 11-169 66-225 (393)
153 4h5i_A Guanine nucleotide-exch 98.7 2.3E-06 7.7E-11 65.2 16.7 143 12-170 136-288 (365)
154 3pe7_A Oligogalacturonate lyas 98.7 5E-07 1.7E-11 68.6 12.6 149 11-170 189-369 (388)
155 3fm0_A Protein CIAO1; WDR39,SG 98.7 1.7E-06 5.8E-11 65.3 15.4 139 11-169 18-168 (345)
156 3zwl_B Eukaryotic translation 98.7 2.2E-06 7.5E-11 64.0 15.9 143 10-170 75-237 (369)
157 4ery_A WD repeat-containing pr 98.6 1.4E-05 4.8E-10 58.9 19.8 138 10-170 66-211 (312)
158 4e54_B DNA damage-binding prot 98.6 2.2E-06 7.5E-11 66.6 15.9 138 11-169 121-268 (435)
159 1erj_A Transcriptional repress 98.6 8.3E-06 2.9E-10 62.5 19.0 136 12-170 126-275 (393)
160 1got_B GT-beta; complex (GTP-b 98.6 6E-06 2E-10 62.0 17.6 137 11-170 145-289 (340)
161 1k8k_C P40, ARP2/3 complex 41 98.6 5.8E-06 2E-10 62.0 17.6 142 10-170 53-221 (372)
162 3ei3_B DNA damage-binding prot 98.6 7E-06 2.4E-10 62.2 18.0 140 10-169 74-223 (383)
163 2pbi_B Guanine nucleotide-bind 98.6 6.3E-06 2.2E-10 62.4 17.7 139 12-170 199-345 (354)
164 2aq5_A Coronin-1A; WD40 repeat 98.6 8.1E-06 2.8E-10 62.5 18.4 139 10-169 82-238 (402)
165 1k8k_C P40, ARP2/3 complex 41 98.6 4.8E-06 1.6E-10 62.5 16.8 141 10-170 9-161 (372)
166 1k32_A Tricorn protease; prote 98.6 1.6E-06 5.5E-11 74.6 15.8 145 12-170 340-490 (1045)
167 1tl2_A L10, protein (tachylect 98.6 9.5E-07 3.3E-11 62.8 11.9 102 2-111 33-152 (236)
168 2ecf_A Dipeptidyl peptidase IV 98.6 9.3E-07 3.2E-11 72.9 13.8 154 12-170 111-304 (741)
169 3azo_A Aminopeptidase; POP fam 98.6 1.8E-06 6.3E-11 70.3 15.2 142 11-169 131-311 (662)
170 1sq9_A Antiviral protein SKI8; 98.6 1.1E-05 3.7E-10 61.2 18.5 135 10-163 187-366 (397)
171 3iz6_a 40S ribosomal protein R 98.6 2.1E-05 7.1E-10 60.0 20.0 140 11-169 207-362 (380)
172 3ei3_B DNA damage-binding prot 98.6 4.9E-06 1.7E-10 63.1 16.4 138 10-170 119-270 (383)
173 3frx_A Guanine nucleotide-bind 98.6 1.6E-05 5.4E-10 59.2 18.7 139 10-170 108-256 (319)
174 2vdu_B TRNA (guanine-N(7)-)-me 98.6 2.4E-06 8.2E-11 66.6 14.4 137 13-170 8-217 (450)
175 3pe7_A Oligogalacturonate lyas 98.5 2.3E-06 8E-11 64.9 13.6 152 15-169 41-206 (388)
176 4gqb_B Methylosome protein 50; 98.5 2.9E-06 1E-10 64.2 14.0 136 11-168 129-274 (344)
177 2pm9_A Protein WEB1, protein t 98.5 4E-06 1.4E-10 64.0 14.8 142 10-169 68-233 (416)
178 1r5m_A SIR4-interacting protei 98.5 1.1E-05 3.7E-10 61.4 17.1 141 11-170 110-266 (425)
179 1nr0_A Actin interacting prote 98.5 2.5E-06 8.7E-11 69.2 14.2 139 11-168 450-597 (611)
180 1vyh_C Platelet-activating fac 98.5 9.9E-06 3.4E-10 62.5 16.9 140 11-170 110-253 (410)
181 3o4h_A Acylamino-acid-releasin 98.5 1.2E-06 4.1E-11 70.5 12.1 135 11-169 111-263 (582)
182 2xzm_R RACK1; ribosome, transl 98.5 3.9E-05 1.3E-09 57.6 19.8 141 10-170 77-232 (343)
183 4gqb_B Methylosome protein 50; 98.5 5.7E-06 1.9E-10 62.7 15.1 136 10-169 170-317 (344)
184 1r5m_A SIR4-interacting protei 98.5 1.2E-05 4E-10 61.2 17.0 138 10-170 248-413 (425)
185 4g56_B MGC81050 protein; prote 98.5 1.9E-06 6.3E-11 65.5 12.3 136 12-169 45-199 (357)
186 2vdu_B TRNA (guanine-N(7)-)-me 98.5 9E-06 3.1E-10 63.3 16.4 138 10-170 150-326 (450)
187 1mda_H Methylamine dehydrogena 98.5 1.9E-06 6.5E-11 66.2 12.2 129 11-162 215-367 (368)
188 3o4h_A Acylamino-acid-releasin 98.5 3E-06 1E-10 68.1 13.8 138 11-170 66-213 (582)
189 3zwl_B Eukaryotic translation 98.5 1.9E-05 6.7E-10 58.8 17.1 139 10-170 116-278 (369)
190 3dwl_C Actin-related protein 2 98.5 2.1E-06 7.3E-11 64.9 11.7 143 10-170 56-224 (377)
191 3vl1_A 26S proteasome regulato 98.5 1.3E-05 4.4E-10 61.3 15.9 133 15-170 103-266 (420)
192 1k32_A Tricorn protease; prote 98.5 4.1E-06 1.4E-10 72.0 14.4 135 11-170 297-439 (1045)
193 3mkq_A Coatomer beta'-subunit; 98.4 9.4E-06 3.2E-10 67.3 15.7 139 9-170 13-160 (814)
194 2j04_A TAU60, YPL007P, hypothe 98.4 6.1E-06 2.1E-10 66.6 13.9 135 10-163 16-194 (588)
195 2xzm_R RACK1; ribosome, transl 98.4 4.2E-05 1.4E-09 57.4 17.9 138 10-169 119-273 (343)
196 3k26_A Polycomb protein EED; W 98.4 3.4E-05 1.2E-09 57.5 17.4 144 4-170 13-180 (366)
197 3vl1_A 26S proteasome regulato 98.4 6.4E-05 2.2E-09 57.4 19.2 144 9-170 139-310 (420)
198 3odt_A Protein DOA1; ubiquitin 98.4 4.3E-05 1.5E-09 55.7 17.5 133 10-167 143-282 (313)
199 3dw8_B Serine/threonine-protei 98.4 1.9E-05 6.3E-10 60.9 16.2 145 6-169 174-360 (447)
200 1nr0_A Actin interacting prote 98.4 6.4E-06 2.2E-10 66.9 14.0 136 11-169 105-257 (611)
201 3azo_A Aminopeptidase; POP fam 98.4 4.9E-06 1.7E-10 67.8 13.3 142 14-170 81-260 (662)
202 3mmy_A MRNA export factor; mRN 98.4 2.4E-05 8E-10 58.3 15.9 67 10-77 87-157 (368)
203 3dwl_C Actin-related protein 2 98.4 4E-06 1.4E-10 63.3 11.3 140 10-169 101-269 (377)
204 4aez_A CDC20, WD repeat-contai 98.4 5.3E-05 1.8E-09 58.0 17.5 139 10-170 218-368 (401)
205 3jrp_A Fusion protein of prote 98.4 4.4E-05 1.5E-09 57.2 16.7 142 10-170 102-275 (379)
206 3ott_A Two-component system se 98.4 2.4E-05 8.2E-10 65.1 16.5 136 12-170 375-534 (758)
207 3frx_A Guanine nucleotide-bind 98.4 9.4E-05 3.2E-09 55.0 18.3 138 10-170 66-215 (319)
208 1vyh_C Platelet-activating fac 98.4 6.7E-05 2.3E-09 57.8 18.0 131 9-162 150-287 (410)
209 3dw8_B Serine/threonine-protei 98.4 3.7E-05 1.3E-09 59.1 16.5 143 10-171 227-436 (447)
210 3i2n_A WD repeat-containing pr 98.4 6.6E-06 2.3E-10 61.3 11.7 133 17-168 176-338 (357)
211 2pbi_B Guanine nucleotide-bind 98.4 0.00012 4.3E-09 55.2 18.8 136 12-170 157-303 (354)
212 3dm0_A Maltose-binding peripla 98.3 7.5E-05 2.6E-09 61.4 18.7 142 10-170 431-580 (694)
213 1sq9_A Antiviral protein SKI8; 98.3 4E-05 1.4E-09 58.0 16.0 142 10-170 63-252 (397)
214 1xfd_A DIP, dipeptidyl aminope 98.3 1.5E-05 5E-10 65.5 14.4 156 11-169 62-272 (723)
215 1pgu_A Actin interacting prote 98.3 6.1E-05 2.1E-09 60.2 17.6 136 12-170 67-226 (615)
216 3lrv_A PRE-mRNA-splicing facto 98.3 3.6E-05 1.2E-09 57.7 15.2 101 49-170 126-233 (343)
217 3s25_A Hypothetical 7-bladed b 98.3 8E-06 2.8E-10 61.0 11.4 79 19-111 24-122 (302)
218 3sfz_A APAF-1, apoptotic pepti 98.3 9.2E-05 3.1E-09 64.4 19.5 138 10-170 616-762 (1249)
219 4g56_B MGC81050 protein; prote 98.3 6.7E-06 2.3E-10 62.4 11.0 137 11-167 141-285 (357)
220 4aez_A CDC20, WD repeat-contai 98.3 0.00013 4.4E-09 55.8 18.1 139 10-170 177-322 (401)
221 3q6k_A 43.2 kDa salivary prote 98.3 6.3E-05 2.2E-09 57.9 15.9 138 11-170 153-341 (381)
222 3dm0_A Maltose-binding peripla 98.3 8E-05 2.7E-09 61.2 17.5 139 10-170 473-621 (694)
223 3jrp_A Fusion protein of prote 98.3 0.00013 4.6E-09 54.5 17.4 142 9-170 11-179 (379)
224 3i2n_A WD repeat-containing pr 98.3 8.2E-05 2.8E-09 55.2 16.1 142 10-170 66-231 (357)
225 3s25_A Hypothetical 7-bladed b 98.3 3E-05 1E-09 57.9 13.5 124 16-171 151-281 (302)
226 3lrv_A PRE-mRNA-splicing facto 98.3 1.8E-05 6.1E-10 59.4 12.4 136 11-169 127-278 (343)
227 3f3f_A Nucleoporin SEH1; struc 98.3 0.00022 7.5E-09 52.3 18.1 106 2-110 4-129 (351)
228 4a5s_A Dipeptidyl peptidase 4 98.3 2E-05 7E-10 65.4 13.6 132 12-169 19-188 (740)
229 1pgu_A Actin interacting prote 98.3 0.00014 4.7E-09 58.1 18.1 138 11-170 408-560 (615)
230 2pm9_A Protein WEB1, protein t 98.2 4.9E-05 1.7E-09 57.9 14.5 140 10-169 166-324 (416)
231 2hes_X YDR267CP; beta-propelle 98.2 0.00017 5.7E-09 53.9 17.0 139 10-168 59-216 (330)
232 2wg3_C Hedgehog-interacting pr 98.2 1.7E-05 5.7E-10 62.7 11.8 59 10-69 139-242 (463)
233 4aow_A Guanine nucleotide-bind 98.2 0.00053 1.8E-08 50.5 19.5 156 10-170 39-234 (340)
234 2ynn_A Coatomer subunit beta'; 98.2 0.00041 1.4E-08 51.1 18.5 138 10-169 98-246 (304)
235 3sfz_A APAF-1, apoptotic pepti 98.2 3.5E-05 1.2E-09 67.0 14.6 137 10-170 1004-1146(1249)
236 1yfq_A Cell cycle arrest prote 98.2 3.1E-05 1.1E-09 57.4 12.1 136 7-163 9-162 (342)
237 4aow_A Guanine nucleotide-bind 98.2 0.00073 2.5E-08 49.7 19.6 139 10-170 172-325 (340)
238 2j04_A TAU60, YPL007P, hypothe 98.2 0.00014 4.7E-09 58.8 16.3 136 11-170 131-286 (588)
239 2xyi_A Probable histone-bindin 98.2 0.00014 4.7E-09 56.3 16.1 137 10-169 232-396 (430)
240 2oaj_A Protein SNI1; WD40 repe 98.2 0.00025 8.6E-09 60.4 18.7 139 11-170 60-230 (902)
241 3mkq_A Coatomer beta'-subunit; 98.2 0.00021 7.3E-09 59.2 17.8 139 10-170 98-247 (814)
242 4e54_B DNA damage-binding prot 98.2 1.7E-05 5.7E-10 61.6 10.5 137 11-170 166-315 (435)
243 2xyi_A Probable histone-bindin 98.2 8.7E-05 3E-09 57.5 14.5 138 10-170 182-340 (430)
244 3c5m_A Oligogalacturonate lyas 98.2 5.5E-05 1.9E-09 57.2 12.9 148 11-170 189-369 (396)
245 2oit_A Nucleoporin 214KDA; NH2 98.1 6.2E-05 2.1E-09 58.8 13.2 136 11-168 94-257 (434)
246 1yfq_A Cell cycle arrest prote 98.1 0.00012 4.1E-09 54.1 14.2 140 10-170 151-311 (342)
247 3iz6_a 40S ribosomal protein R 98.1 0.00028 9.4E-09 53.7 16.4 135 12-170 160-317 (380)
248 4a11_B DNA excision repair pro 98.1 0.00024 8.1E-09 53.6 15.5 138 9-169 43-205 (408)
249 2j04_B YDR362CP, TAU91; beta p 98.1 0.00014 4.9E-09 58.2 14.8 138 10-169 267-415 (524)
250 2hes_X YDR267CP; beta-propelle 98.1 0.00057 2E-08 50.9 17.0 140 10-169 15-171 (330)
251 2pm7_B Protein transport prote 98.1 0.00078 2.7E-08 49.4 17.5 137 6-162 6-156 (297)
252 3gre_A Serine/threonine-protei 98.0 0.00036 1.2E-08 53.7 15.7 144 9-170 63-233 (437)
253 3f3f_A Nucleoporin SEH1; struc 98.0 0.0002 6.9E-09 52.5 13.8 98 10-110 111-235 (351)
254 4a11_B DNA excision repair pro 98.0 0.00051 1.7E-08 51.8 16.2 139 9-170 99-264 (408)
255 3amr_A 3-phytase; beta-propell 98.0 0.00052 1.8E-08 52.2 15.8 104 9-113 127-252 (355)
256 2oaj_A Protein SNI1; WD40 repe 98.0 0.0002 7E-09 60.9 14.9 135 10-169 18-170 (902)
257 1z68_A Fibroblast activation p 98.0 3.2E-05 1.1E-09 63.6 9.6 144 11-169 111-329 (719)
258 3jro_A Fusion protein of prote 98.0 0.00015 5E-09 60.4 13.4 142 10-170 100-273 (753)
259 2gop_A Trilobed protease; beta 98.0 0.00028 9.7E-09 52.5 13.7 136 11-169 60-232 (347)
260 3mmy_A MRNA export factor; mRN 98.0 0.0013 4.5E-08 48.7 17.4 113 9-144 39-163 (368)
261 3odt_A Protein DOA1; ubiquitin 98.0 0.00085 2.9E-08 48.7 15.6 133 11-169 106-242 (313)
262 4a5s_A Dipeptidyl peptidase 4 98.0 0.00029 9.8E-09 58.5 14.5 150 13-167 65-275 (740)
263 3ott_A Two-component system se 97.9 0.00044 1.5E-08 57.5 15.6 110 12-146 474-591 (758)
264 2pm7_B Protein transport prote 97.9 0.0011 3.7E-08 48.6 16.0 141 10-169 100-272 (297)
265 3jro_A Fusion protein of prote 97.9 0.00033 1.1E-08 58.3 14.6 138 4-161 4-155 (753)
266 4a9v_A PHOX; hydrolase, beta-p 97.9 4.2E-05 1.5E-09 61.5 8.6 60 8-68 474-549 (592)
267 3amr_A 3-phytase; beta-propell 97.9 0.00044 1.5E-08 52.5 13.7 132 20-171 39-199 (355)
268 3k26_A Polycomb protein EED; W 97.9 0.00041 1.4E-08 51.5 13.6 114 10-142 70-193 (366)
269 2xdw_A Prolyl endopeptidase; a 97.9 0.00037 1.3E-08 57.5 14.3 141 12-169 127-303 (710)
270 3c5m_A Oligogalacturonate lyas 97.9 0.00035 1.2E-08 52.7 12.8 148 12-169 38-206 (396)
271 3gre_A Serine/threonine-protei 97.9 0.00074 2.5E-08 51.9 14.7 139 10-169 112-279 (437)
272 2gop_A Trilobed protease; beta 97.8 0.00064 2.2E-08 50.5 13.2 145 10-170 15-188 (347)
273 3v7d_B Cell division control p 97.8 0.0038 1.3E-07 48.3 17.2 141 9-170 162-329 (464)
274 3vu4_A KMHSV2; beta-propeller 97.7 0.0026 8.9E-08 47.9 14.9 81 27-111 156-258 (355)
275 3bg1_A Protein SEC13 homolog; 97.7 0.00091 3.1E-08 49.5 11.9 98 10-110 14-122 (316)
276 3q7m_A Lipoprotein YFGL, BAMB; 97.7 0.0021 7.1E-08 48.6 14.0 100 20-145 239-341 (376)
277 3v7d_B Cell division control p 97.6 0.0052 1.8E-07 47.5 16.3 129 17-170 276-410 (464)
278 1tl2_A L10, protein (tachylect 97.6 0.0015 5.1E-08 46.5 11.7 94 50-170 42-152 (236)
279 2bkl_A Prolyl endopeptidase; m 97.6 0.0028 9.7E-08 52.1 14.9 140 12-169 123-287 (695)
280 3vu4_A KMHSV2; beta-propeller 97.6 0.012 4.3E-07 44.1 18.9 154 10-170 20-214 (355)
281 4gga_A P55CDC, cell division c 97.6 0.015 5.1E-07 44.5 19.2 152 11-170 149-339 (420)
282 4gga_A P55CDC, cell division c 97.6 0.0081 2.8E-07 46.1 16.4 140 9-169 230-382 (420)
283 4gq1_A NUP37; propeller, trans 97.5 0.0041 1.4E-07 47.5 14.1 65 10-76 137-213 (393)
284 2w18_A PALB2, fancn, partner a 97.5 0.014 5E-07 44.3 16.3 135 14-169 183-344 (356)
285 3iuj_A Prolyl endopeptidase; h 97.5 0.006 2.1E-07 50.3 15.2 141 10-169 129-297 (693)
286 3bg1_A Protein SEC13 homolog; 97.5 0.0065 2.2E-07 44.8 14.0 147 11-163 59-224 (316)
287 2xdw_A Prolyl endopeptidase; a 97.4 0.0032 1.1E-07 51.9 12.9 139 12-170 235-398 (710)
288 3q6k_A 43.2 kDa salivary prote 97.4 0.003 1E-07 48.6 11.2 99 10-113 220-343 (381)
289 4ggc_A P55CDC, cell division c 97.3 0.025 8.5E-07 40.9 16.2 62 13-77 29-94 (318)
290 3b7f_A Glycosyl hydrolase, BNR 97.3 0.013 4.6E-07 44.7 14.3 99 11-111 56-196 (394)
291 2bkl_A Prolyl endopeptidase; m 97.2 0.006 2E-07 50.2 12.0 136 13-170 230-381 (695)
292 2j04_B YDR362CP, TAU91; beta p 97.2 0.0076 2.6E-07 48.2 12.2 136 11-169 209-373 (524)
293 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.048 1.6E-06 41.9 16.4 133 12-170 282-426 (445)
294 1kb0_A Quinohemoprotein alcoho 97.1 0.02 6.8E-07 47.3 14.7 109 20-145 77-203 (677)
295 1yr2_A Prolyl oligopeptidase; 97.1 0.028 9.7E-07 46.6 15.6 141 12-169 165-333 (741)
296 2oit_A Nucleoporin 214KDA; NH2 97.1 0.063 2.1E-06 41.7 16.5 100 10-110 150-257 (434)
297 3b7f_A Glycosyl hydrolase, BNR 97.1 0.029 9.8E-07 42.8 14.3 97 13-111 118-251 (394)
298 4ggc_A P55CDC, cell division c 97.0 0.048 1.7E-06 39.4 15.8 107 12-142 70-182 (318)
299 3q7m_A Lipoprotein YFGL, BAMB; 96.9 0.034 1.2E-06 41.8 13.4 59 20-80 53-123 (376)
300 2xbg_A YCF48-like protein; pho 96.9 0.085 2.9E-06 39.3 16.3 94 12-111 124-222 (327)
301 1kb0_A Quinohemoprotein alcoho 96.7 0.1 3.5E-06 43.1 15.6 15 156-170 397-411 (677)
302 1yr2_A Prolyl oligopeptidase; 96.7 0.049 1.7E-06 45.1 13.4 136 12-169 270-424 (741)
303 2ad6_A Methanol dehydrogenase 96.6 0.07 2.4E-06 43.1 13.8 108 20-144 62-188 (571)
304 2xe4_A Oligopeptidase B; hydro 96.6 0.018 6.1E-07 48.0 10.5 112 12-142 176-305 (751)
305 2xbg_A YCF48-like protein; pho 96.6 0.14 4.7E-06 38.1 16.3 91 12-110 82-179 (327)
306 3iuj_A Prolyl endopeptidase; h 96.5 0.087 3E-06 43.4 13.8 134 13-170 178-344 (693)
307 1yiq_A Quinohemoprotein alcoho 96.4 0.15 5.1E-06 42.2 14.5 109 20-144 70-195 (689)
308 1kv9_A Type II quinohemoprotei 96.3 0.15 5E-06 42.0 14.0 109 20-144 66-190 (668)
309 2ad6_A Methanol dehydrogenase 96.3 0.33 1.1E-05 39.1 16.1 16 155-170 389-404 (571)
310 2hz6_A Endoplasmic reticulum t 96.1 0.0032 1.1E-07 48.0 3.0 128 14-169 4-136 (369)
311 1w6s_A Methanol dehydrogenase 96.0 0.23 7.9E-06 40.4 13.4 110 20-144 62-194 (599)
312 3zwu_A Alkaline phosphatase PH 95.9 0.044 1.5E-06 44.6 8.7 60 7-67 473-548 (592)
313 3sbq_A Nitrous-oxide reductase 95.5 0.19 6.5E-06 40.7 10.7 67 41-111 315-395 (638)
314 1xip_A Nucleoporin NUP159; bet 95.3 0.52 1.8E-05 36.2 12.5 122 10-163 38-174 (388)
315 1w6s_A Methanol dehydrogenase 95.1 1.1 3.7E-05 36.5 15.8 16 155-170 396-411 (599)
316 1p22_A F-BOX/WD-repeat protein 95.0 0.84 2.9E-05 34.8 15.1 129 11-169 215-352 (435)
317 1kv9_A Type II quinohemoprotei 94.9 1.3 4.6E-05 36.3 15.9 14 156-169 385-398 (668)
318 4gq1_A NUP37; propeller, trans 94.5 0.5 1.7E-05 35.7 10.6 99 21-143 101-220 (393)
319 1flg_A Protein (quinoprotein e 94.5 1.3 4.5E-05 35.8 13.5 58 20-80 68-137 (582)
320 2xe4_A Oligopeptidase B; hydro 94.4 0.18 6E-06 42.1 8.3 102 51-170 176-289 (751)
321 1p22_A F-BOX/WD-repeat protein 94.1 1.5 5E-05 33.4 16.5 62 16-80 138-203 (435)
322 1xip_A Nucleoporin NUP159; bet 94.0 1.6 5.5E-05 33.5 14.2 128 9-168 87-230 (388)
323 1yiq_A Quinohemoprotein alcoho 93.0 0.91 3.1E-05 37.5 10.2 79 30-112 455-536 (689)
324 2w18_A PALB2, fancn, partner a 92.9 2.4 8.1E-05 32.2 13.8 84 54-145 183-273 (356)
325 1flg_A Protein (quinoprotein e 92.5 1.2 4.2E-05 35.9 10.2 79 29-112 465-547 (582)
326 1sqj_A OXG-RCBH, oligoxylogluc 91.9 5 0.00017 33.7 16.6 101 10-111 15-140 (789)
327 2ovr_B FBW7, F-BOX/WD repeat p 90.9 4.2 0.00014 30.8 17.2 66 11-80 161-229 (445)
328 2be1_A Serine/threonine-protei 90.3 1.7 6E-05 32.7 8.3 21 20-40 10-31 (339)
329 1sqj_A OXG-RCBH, oligoxylogluc 89.4 8.7 0.0003 32.2 12.9 98 12-110 123-247 (789)
330 2hz6_A Endoplasmic reticulum t 88.8 0.66 2.2E-05 35.0 5.1 96 20-144 92-195 (369)
331 1k3i_A Galactose oxidase precu 87.4 11 0.00036 30.7 12.4 110 39-169 176-303 (656)
332 3sbq_A Nitrous-oxide reductase 85.0 14 0.0005 30.1 11.6 66 10-77 323-405 (638)
333 2cn3_A Xyloglucanase, beta-1,4 84.9 16 0.00053 30.4 14.3 100 11-111 24-151 (737)
334 2cn3_A Xyloglucanase, beta-1,4 78.7 27 0.00093 28.9 14.9 144 13-170 135-320 (737)
335 2uvk_A YJHT; unknown function, 76.4 20 0.00069 26.2 15.5 86 19-111 18-125 (357)
336 3a0f_A Xyloglucanase; beta-pro 69.8 48 0.0016 27.6 16.5 96 13-110 136-262 (763)
337 3a0f_A Xyloglucanase; beta-pro 67.2 54 0.0019 27.3 17.1 100 10-110 21-151 (763)
338 2be1_A Serine/threonine-protei 64.4 14 0.00046 27.8 5.4 24 19-42 110-134 (339)
339 1k3i_A Galactose oxidase precu 60.8 65 0.0022 26.1 16.5 63 14-78 247-321 (656)
340 3f6k_A Sortilin; protein sorti 31.5 2.2E+02 0.0077 23.6 10.9 67 13-80 93-169 (685)
341 3kvp_A Uncharacterized protein 31.4 46 0.0016 18.6 2.7 16 132-147 40-55 (72)
342 3ii7_A Kelch-like protein 7; p 27.9 1.6E+02 0.0054 20.7 15.4 109 20-147 101-231 (306)
343 1wi9_A Protein C20ORF116 homol 22.8 35 0.0012 19.3 1.2 16 155-171 52-67 (72)
344 4asc_A Kelch repeat and BTB do 21.8 2.2E+02 0.0074 20.1 15.3 110 20-148 98-228 (315)
345 3f6k_A Sortilin; protein sorti 21.2 3.6E+02 0.012 22.4 15.1 74 30-110 65-156 (685)
346 4fww_A Macrophage-stimulating 20.3 2.9E+02 0.0098 21.8 6.5 27 13-40 18-45 (527)
No 1
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.91 E-value=1.1e-22 Score=152.60 Aligned_cols=166 Identities=19% Similarity=0.271 Sum_probs=130.6
Q ss_pred CceecCCccCCcceEEEcCCCC-EEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC-CeEEEEc
Q 030700 1 MIKLGEGIVNHPEDVSVDGNGV-LYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVS 77 (173)
Q Consensus 1 ~~~~~~~~~~~p~~l~~~~~g~-l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~ 77 (173)
+|++..+ +..+|+++|+++|. ||+++ .+++|++++++|+...+......++ +++++++|++ |+|+.. .+|.+++
T Consensus 37 ~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l-~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 37 LLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRL-VHCEHGRRAITRSD 113 (305)
T ss_dssp CEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCE-EEEETTTTEEEEEC
T ss_pred eEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCE-EEEECCCCEEEEEC
Confidence 4678888 68899999999886 88777 7789999999888777766677899 9999999998 999866 5788888
Q ss_pred cCC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccce--eeecccCCCceEEEEcCCCCeeEEeeccccCc
Q 030700 78 EEG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYY--LDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFA 154 (173)
Q Consensus 78 ~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~--~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p 154 (173)
.+| .+.+.....+.+++.|++++++++|++|++|.. ++..... .........+.|+++|++++++..+. .+..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 114 ADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp TTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred CCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 878 777766666677789999999999999999753 1111000 00011123478999999888877777 88899
Q ss_pred ceEEEccCCCEEEEEecC
Q 030700 155 NGVALSEDERFLVVCESW 172 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~~ 172 (173)
+|++|+||++.|||+++.
T Consensus 191 ~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp EEEEECTTSSEEEEEECC
T ss_pred cceEEcCCCCEEEEEecC
Confidence 999999999999999874
No 2
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.91 E-value=6.1e-23 Score=154.96 Aligned_cols=166 Identities=25% Similarity=0.397 Sum_probs=127.8
Q ss_pred cCCccCCcceEEEcCCCC-EEEEcCCCeEEEEcCCC-cEEEecc--------------------ccCccccceEEcc-CC
Q 030700 5 GEGIVNHPEDVSVDGNGV-LYTATGDGWIKRMHPNG-TWEDWHQ--------------------VGSQSLLGLTTTK-EN 61 (173)
Q Consensus 5 ~~~~~~~p~~l~~~~~g~-l~~~~~~~~i~~~~~~g-~~~~~~~--------------------~~~~p~~gl~~~~-~g 61 (173)
.++.+..|++++++++|+ +|++..+++|+++++++ ++..+.. ....|. ||++++ +|
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g 92 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNN 92 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTT
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCC
Confidence 345688999999999998 77766889999999765 4554421 124689 999997 78
Q ss_pred cEEEEEeCCCeEEEEccC-C-cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEc
Q 030700 62 NVIIVCDSQQGLLKVSEE-G-VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD 138 (173)
Q Consensus 62 ~l~~v~~~~~~i~~~~~~-g-~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 138 (173)
++ ||++..+++++++.+ + .+.+.....+.++..|+++++++ +|++||++....+....+...+++....++|+++|
T Consensus 93 ~l-~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 93 QL-YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp EE-EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred cE-EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 88 999988889999975 4 66666555556678899999999 99999998654333322222223334568999999
Q ss_pred CCCCeeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 139 PSTNQTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 139 ~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+++++++.+...+..|+||++++||++|||+++.
T Consensus 172 ~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 172 PSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp TTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG
T ss_pred CCCCEEEEeccCCccCcceEECCCCCEEEEEeCC
Confidence 9888888777788999999999999999999874
No 3
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.86 E-value=1.2e-20 Score=144.31 Aligned_cols=163 Identities=22% Similarity=0.363 Sum_probs=120.5
Q ss_pred CCccCCcceEEEcCCCCEEEEc-------------CCCeEEEEcCC---CcEEEeccc-------cCccccceEEcc--C
Q 030700 6 EGIVNHPEDVSVDGNGVLYTAT-------------GDGWIKRMHPN---GTWEDWHQV-------GSQSLLGLTTTK--E 60 (173)
Q Consensus 6 ~~~~~~p~~l~~~~~g~l~~~~-------------~~~~i~~~~~~---g~~~~~~~~-------~~~p~~gl~~~~--~ 60 (173)
++...+||+++++++|.+|++. ..|+|+++|++ ++..++... ...|+ ||.+.+ +
T Consensus 46 ~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~~~~d~d 124 (355)
T 3sre_A 46 KGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GISTFIDDD 124 (355)
T ss_dssp TTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEEEEECTT
T ss_pred CCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeEEEECCC
Confidence 4545789999999999999885 57899999965 344443222 24899 999966 4
Q ss_pred Cc-EEEEEeCCC-----eEEEEccCC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccc-eeeecccCCCc
Q 030700 61 NN-VIIVCDSQQ-----GLLKVSEEG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEY-YLDLVSGEPHG 132 (173)
Q Consensus 61 g~-l~~v~~~~~-----~i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~-~~~~~~~~~~~ 132 (173)
|+ .|||++... .+++++.++ ...+...+.++++++||+++++++|++|+++... +....+ ..+..+..+.+
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHHTTCCCE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccchhhccCCcc
Confidence 53 339998663 377777766 6666777788899999999999999999997531 111000 01111234668
Q ss_pred eEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 133 VLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+||++++. ++++++.++..||||+||||+++|||+|+.
T Consensus 204 ~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~ 241 (355)
T 3sre_A 204 FVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELL 241 (355)
T ss_dssp EEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred EEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCC
Confidence 99999994 677888899999999999999999999975
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.85 E-value=9.8e-20 Score=135.43 Aligned_cols=164 Identities=19% Similarity=0.223 Sum_probs=122.7
Q ss_pred ceecCCccCCcceEEEcCCCC-EEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC-CeEEEEcc
Q 030700 2 IKLGEGIVNHPEDVSVDGNGV-LYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~-l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~ 78 (173)
+++..+ +..|++++|+|+|. ||+++ .+++|+++++++....+......|. +++++++|++ |++... .++.+++.
T Consensus 21 ~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l-~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 21 RRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHL-IACSHGLRRLERQRE 97 (296)
T ss_dssp EEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCE-EEEETTTTEEEEECS
T ss_pred EEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcE-EEEecCCCeEEEEcC
Confidence 556666 78899999999987 77766 7789999998766555555567789 9999999998 888865 67888986
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccce--eeecccCCCceEEEEcCCCCeeEEeeccccCc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYY--LDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFA 154 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~--~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p 154 (173)
+| .+.+.....+.+...|++++++++|++|+++... +..... .........+.|++++++ ++...+...+..|
T Consensus 98 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~--g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (296)
T 3e5z_A 98 PGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTY--GIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP 174 (296)
T ss_dssp TTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSH--HHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE
T ss_pred CCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcc--ccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC
Confidence 77 6666554455556789999999999999987521 000000 000011234699999998 7777777888999
Q ss_pred ceEEEccCCCEEEEEecC
Q 030700 155 NGVALSEDERFLVVCESW 172 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~~ 172 (173)
++++|+||++.| ++++.
T Consensus 175 ~gi~~s~dg~~l-v~~~~ 191 (296)
T 3e5z_A 175 NGLAFLPSGNLL-VSDTG 191 (296)
T ss_dssp EEEEECTTSCEE-EEETT
T ss_pred ccEEECCCCCEE-EEeCC
Confidence 999999999988 87763
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.85 E-value=6.4e-20 Score=137.00 Aligned_cols=161 Identities=12% Similarity=0.055 Sum_probs=120.8
Q ss_pred ceecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-
Q 030700 2 IKLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~- 78 (173)
+.+.+..+..+||++|++ ++.||+++ .+++|+++++++...........+. +++++++|++ |++. ..++++++.
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~~~~dG~l-~v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVS-SVALRQSGGY-VATI-GTKFCALNWK 81 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEE-EEEEBTTSSE-EEEE-TTEEEEEETT
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceE-EEEECCCCCE-EEEE-CCeEEEEECC
Confidence 344445578899999999 67899888 6789999997654333334456788 9999999997 8886 568999996
Q ss_pred CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceE
Q 030700 79 EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGV 157 (173)
Q Consensus 79 ~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi 157 (173)
++ .+.+.....+.+...+++++++++|++|+++...... ........++|++++++ ++...+...+..||||
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi 154 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGL 154 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEE
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccce
Confidence 56 6666655445556789999999999999986431100 00011245799999997 6666677778899999
Q ss_pred EEccCCCEEEEEecC
Q 030700 158 ALSEDERFLVVCESW 172 (173)
Q Consensus 158 ~~~~dg~~lyv~~~~ 172 (173)
+|+||++.||++++.
T Consensus 155 ~~spdg~~lyv~~~~ 169 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSL 169 (297)
T ss_dssp EECTTSCEEEEEEGG
T ss_pred EEcCCCCEEEEecCC
Confidence 999999999999864
No 6
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.82 E-value=4.5e-19 Score=135.95 Aligned_cols=164 Identities=18% Similarity=0.237 Sum_probs=117.4
Q ss_pred CceecCCccCCcceEEEcCCCCEEEEcCCCeEEEEcCCCcEEEec------cccCccccceEEccC----CcEEEEEeCC
Q 030700 1 MIKLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWH------QVGSQSLLGLTTTKE----NNVIIVCDSQ 70 (173)
Q Consensus 1 ~~~~~~~~~~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~~~------~~~~~p~~gl~~~~~----g~l~~v~~~~ 70 (173)
++.++.+ +..|++++++|+|+|||++..++|++++.+|+ ..+. .....|. ||+++++ +++ |++...
T Consensus 21 ~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~l-yv~~~~ 96 (354)
T 3a9g_A 21 ISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWV-YLYASY 96 (354)
T ss_dssp EEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEE-EEEEEE
T ss_pred EEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEE-EEEEec
Confidence 3567777 89999999999999999998899999988887 4332 1235688 9999997 566 998763
Q ss_pred --------CeEEEEccCC-------cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEE
Q 030700 71 --------QGLLKVSEEG-------VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLL 135 (173)
Q Consensus 71 --------~~i~~~~~~g-------~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 135 (173)
..|++++.++ .+.+.........+.+++|+++|||.||++...... . .... -.....++|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~-~-~~~~--d~~~~~G~I~ 172 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAAD-P-RLAQ--DLSSLAGKIL 172 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTC-G-GGGT--CTTCCSSEEE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCC-C-cccc--CCCCCCeEEE
Confidence 5688887432 222333233333467899999999999999754211 0 0000 0123457999
Q ss_pred EEcCCCC--------eeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 136 KYDPSTN--------QTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 136 ~~d~~~~--------~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
|+++++. ..+.++.++++|+||+|+|+...||++|.+
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECC
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecC
Confidence 9999854 356788889999999999954459999875
No 7
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=9.5e-19 Score=134.04 Aligned_cols=165 Identities=18% Similarity=0.210 Sum_probs=117.2
Q ss_pred CceecCCccCCcceEEEcCCCCEEEEcCCCeEEEEcCCCcEEEec------cccCccccceEEccC---CcEEEEEeCC-
Q 030700 1 MIKLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWH------QVGSQSLLGLTTTKE---NNVIIVCDSQ- 70 (173)
Q Consensus 1 ~~~~~~~~~~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~~~------~~~~~p~~gl~~~~~---g~l~~v~~~~- 70 (173)
++.++.+ +..|++++++|+|+|||++..++|++++ +|+...+. .....|. ||+++++ ++.||+++..
T Consensus 23 ~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 23 VEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp EEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEecC
Confidence 3567777 8999999999999999999879999998 77644332 1235799 9999998 4444999863
Q ss_pred -----CeEEEEccCC--c---EEEEeccC--CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEc
Q 030700 71 -----QGLLKVSEEG--V---TVLVSQFN--GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD 138 (173)
Q Consensus 71 -----~~i~~~~~~g--~---~~~~~~~~--~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 138 (173)
..|.+++.++ . +.+..... ....+.+++|+++|||.||+++..... . ..... .....++|+|++
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~-~-~~~~d--~~~~~g~I~ri~ 175 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE-R-ELAQD--LASLGGKILRLT 175 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC-G-GGGGC--TTCSSSEEEEEC
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC-C-ccccC--CCCCceEEEEEc
Confidence 5688887543 2 23333233 233467899999999999999754211 0 00000 123457999999
Q ss_pred CCC-------------CeeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 139 PST-------------NQTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 139 ~~~-------------~~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+++ ...+.++.++.+|+||+|+|+...||++|.+
T Consensus 176 ~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 176 PEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred CCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 985 2456777889999999999955569999875
No 8
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.80 E-value=5.4e-18 Score=131.34 Aligned_cols=148 Identities=14% Similarity=0.156 Sum_probs=111.5
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCc-EEEec-cccCccccceEEccCCcEEEEEeCC-CeEEEEc
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGT-WEDWH-QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVS 77 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~-~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~ 77 (173)
.+..+ +..|.++++++ ++.||++| ..++|++++++|. ...+. .....|. ||++++.++.||+++.. +.|.+++
T Consensus 110 ~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 110 LLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp EEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEECB
T ss_pred EEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 34455 78899999997 77999999 7789999998875 33332 3345799 99999754444999976 4677777
Q ss_pred cCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccC
Q 030700 78 EEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYF 153 (173)
Q Consensus 78 ~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~ 153 (173)
.+| .+.+.. ..+..|++|++|| +|.|||+|.. ..++|+++++++...+.+. .++..
T Consensus 188 ~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~ 247 (386)
T 3v65_B 188 LDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFW 247 (386)
T ss_dssp TTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSC
T ss_pred CCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCC
Confidence 777 344432 2246899999998 5679999854 1268999999865544444 56889
Q ss_pred cceEEEccCCCEEEEEecC
Q 030700 154 ANGVALSEDERFLVVCESW 172 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~~~~ 172 (173)
|+||+|+|+++.|||+|+.
T Consensus 248 PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp EEEEEEEGGGTEEEEEETT
T ss_pred eeeEEEeCCCCEEEEEECC
Confidence 9999999999999999974
No 9
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.80 E-value=7.7e-18 Score=128.85 Aligned_cols=147 Identities=14% Similarity=0.164 Sum_probs=110.9
Q ss_pred ecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcE-EEe-ccccCccccceEEccCCcEEEEEeCC-CeEEEEcc
Q 030700 4 LGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTW-EDW-HQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE 78 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~-~~~-~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~ 78 (173)
+..+ +..|.++++++ ++.||++| ..++|++++++|.. ..+ ......|. ||++|+.++.||+++.. +.|.+++.
T Consensus 68 ~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~ 145 (349)
T 3v64_C 68 LLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANL 145 (349)
T ss_dssp EECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEET
T ss_pred eecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcC
Confidence 3444 68899999997 78999999 67899999987753 333 23346799 99999754444999976 46888888
Q ss_pred CC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCc
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFA 154 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p 154 (173)
+| .+.+.. ..+..|++|++|| +|.|||+|.. ..++|+++++++...+.+. .++..|
T Consensus 146 dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~~P 205 (349)
T 3v64_C 146 DGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLFWP 205 (349)
T ss_dssp TSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCSCE
T ss_pred CCCceEEEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCCCc
Confidence 87 344432 2246899999998 5789999854 1268999999865554444 468899
Q ss_pred ceEEEccCCCEEEEEecC
Q 030700 155 NGVALSEDERFLVVCESW 172 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~~ 172 (173)
+||+++|+++.|||+|+.
T Consensus 206 nGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 206 NGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp EEEEEETTTTEEEEEETT
T ss_pred ceEEEeCCCCEEEEEECC
Confidence 999999999999999974
No 10
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.79 E-value=7.9e-18 Score=125.42 Aligned_cols=164 Identities=25% Similarity=0.374 Sum_probs=119.7
Q ss_pred ceecCCccCCcceEEEcCCCCEEEE-------c-CCCeEEEEcC-CCcEEEecc-----ccCccccceEEccC-CcEEEE
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTA-------T-GDGWIKRMHP-NGTWEDWHQ-----VGSQSLLGLTTTKE-NNVIIV 66 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~-------~-~~~~i~~~~~-~g~~~~~~~-----~~~~p~~gl~~~~~-g~l~~v 66 (173)
+++..+ +..|++++++++|.||++ + .++.|+++++ +|+...+.. ....|. +++++++ |++ |+
T Consensus 11 ~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l-~v 87 (314)
T 1pjx_A 11 TKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQL-FV 87 (314)
T ss_dssp EEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEE-EE
T ss_pred hhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcE-EE
Confidence 455555 889999999999999998 5 6788999994 677665533 335788 9999999 888 99
Q ss_pred EeCCCeEEEEccCC-cEEE-EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 67 CDSQQGLLKVSEEG-VTVL-VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 67 ~~~~~~i~~~~~~g-~~~~-~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
+....++++++.+| ...+ .....+.+...|++++++++|++|+++.........+ ........+.|++++++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc--cccccCCCCeEEEECCC-CCE
Confidence 88777899998668 5544 3333334456799999999999999975421000000 00011234789999998 777
Q ss_pred EEeeccccCcceEEEc----cCCCEEEEEec
Q 030700 145 SLVLDGLYFANGVALS----EDERFLVVCES 171 (173)
Q Consensus 145 ~~~~~~~~~p~gi~~~----~dg~~lyv~~~ 171 (173)
..+......|++++++ +|++.||++++
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 6666667889999999 99989999975
No 11
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.79 E-value=2.9e-17 Score=123.95 Aligned_cols=146 Identities=13% Similarity=0.117 Sum_probs=107.5
Q ss_pred ecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCC----c-EEEec-cccCccccceEEcc-CCcEEEEEeCC-CeE
Q 030700 4 LGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNG----T-WEDWH-QVGSQSLLGLTTTK-ENNVIIVCDSQ-QGL 73 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g----~-~~~~~-~~~~~p~~gl~~~~-~g~l~~v~~~~-~~i 73 (173)
+... +..|+++++++ ++.||+++ .+++|++++.+| . ...+. .....|. ||++|+ ++++ |+++.. +.|
T Consensus 25 ~~~~-~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~l-y~~d~~~~~I 101 (316)
T 1ijq_A 25 LIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNI-YWTDSVLGTV 101 (316)
T ss_dssp EECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEE-EEEETTTTEE
T ss_pred hhcC-CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeE-EEEECCCCEE
Confidence 3344 68899999998 67999999 678999999876 2 23332 2346899 999996 4555 999876 468
Q ss_pred EEEccCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-c
Q 030700 74 LKVSEEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-D 149 (173)
Q Consensus 74 ~~~~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~ 149 (173)
.+++.+| .+.+... .+..|+++++|| +|.+||++.. ..++|+++++++...+.+. .
T Consensus 102 ~~~~~~g~~~~~~~~~----~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~ 161 (316)
T 1ijq_A 102 SVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTE 161 (316)
T ss_dssp EEEETTSSSEEEEEEC----TTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECS
T ss_pred EEEeCCCCceEEEEEC----CCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEEC
Confidence 8888777 4444431 236899999998 6789999753 1268999999855444443 4
Q ss_pred cccCcceEEEccCCCEEEEEecC
Q 030700 150 GLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.+..|+||+++++++.|||+|+.
T Consensus 162 ~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 162 NIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp SCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEeccCCEEEEEECC
Confidence 68899999999999999999974
No 12
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.78 E-value=2.8e-17 Score=127.85 Aligned_cols=147 Identities=13% Similarity=0.119 Sum_probs=109.4
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCc-----EEEe-ccccCccccceEEcc-CCcEEEEEeCC-Ce
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGT-----WEDW-HQVGSQSLLGLTTTK-ENNVIIVCDSQ-QG 72 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~-----~~~~-~~~~~~p~~gl~~~~-~g~l~~v~~~~-~~ 72 (173)
++..+ +..|.+|++++ ++.||++| ..++|++++.+|. ...+ ......|. ||++|+ .+++ |+++.. +.
T Consensus 106 ~~~~~-~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~l-Y~~d~~~~~ 182 (400)
T 3p5b_L 106 SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNI-YWTDSVLGT 182 (400)
T ss_dssp EEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEE-EEEETTTTE
T ss_pred Eeccc-cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCce-EEEECCCCe
Confidence 34444 78999999998 67999999 6789999998762 2333 33456899 999998 5555 999976 46
Q ss_pred EEEEccCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-
Q 030700 73 LLKVSEEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL- 148 (173)
Q Consensus 73 i~~~~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~- 148 (173)
|.+++.+| ...+... .+..|++|++|| +|.|||+|.. ..++|+++++++...+.+.
T Consensus 183 I~~~~~~g~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~ 242 (400)
T 3p5b_L 183 VSVADTKGVKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVT 242 (400)
T ss_dssp EEEECTTTCSEEEEEEC----SSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEEC
T ss_pred EEEEeCCCCceEEEEeC----CCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEE
Confidence 77778787 4444331 246799999998 5789999853 1258999999865544443
Q ss_pred ccccCcceEEEccCCCEEEEEecC
Q 030700 149 DGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 149 ~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.++..|+||+++++++.|||+|+.
T Consensus 243 ~~l~~P~glavd~~~~~lY~aD~~ 266 (400)
T 3p5b_L 243 ENIQWPNGITLDLLSGRLYWVDSK 266 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEEEeCCCEEEEEECC
Confidence 468999999999999999999974
No 13
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.78 E-value=1.4e-17 Score=126.03 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=108.3
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcE---EEeccccCccccceEEcc-CCcEEEEEeCC-CeEEEEccCC-
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTW---EDWHQVGSQSLLGLTTTK-ENNVIIVCDSQ-QGLLKVSEEG- 80 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~---~~~~~~~~~p~~gl~~~~-~g~l~~v~~~~-~~i~~~~~~g- 80 (173)
+..|.+|+|++ ++.||++| ..++|++++++|.. ..+......|. |+++++ ++++ |+++.. ..|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~l-y~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKL-YWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEE-EEEETTTTEEEEEETTSC
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeE-EEEECCCCEEEEEECCCC
Confidence 56788999998 68999999 67899999987752 22333456899 999997 4555 999976 4687888887
Q ss_pred -cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGV 157 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi 157 (173)
.+.+.. ..+..|++|+++| .|.||+++.. ..++|+++++++...+.+. .++..|+||
T Consensus 112 ~~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 112 LRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp SCEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred cEEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 444432 2246899999998 5789999843 2368999999855444443 568999999
Q ss_pred EEccCCCEEEEEecC
Q 030700 158 ALSEDERFLVVCESW 172 (173)
Q Consensus 158 ~~~~dg~~lyv~~~~ 172 (173)
+++++++.|||+|+.
T Consensus 172 avd~~~~~lY~aD~~ 186 (318)
T 3sov_A 172 TLDYEEQKLYWADAK 186 (318)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEeccCCEEEEEECC
Confidence 999999999999974
No 14
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=4.6e-17 Score=123.09 Aligned_cols=166 Identities=14% Similarity=0.185 Sum_probs=115.5
Q ss_pred ecCCccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCc---EEEec---------cccCccccceEEcc-CCcEEEEEeC
Q 030700 4 LGEGIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGT---WEDWH---------QVGSQSLLGLTTTK-ENNVIIVCDS 69 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~---~~~~~---------~~~~~p~~gl~~~~-~g~l~~v~~~ 69 (173)
+..+.+..|.+++++++|+||+++ .+++|++++++|+ +..+. .....|. +|++++ +|++ |+++.
T Consensus 85 ~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~l-yv~d~ 162 (329)
T 3fvz_A 85 SGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAV-FVSDG 162 (329)
T ss_dssp ECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCE-EEEEC
T ss_pred cCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeE-EEEeC
Confidence 344557899999999999999999 6789999998886 22331 1233699 999999 8888 99995
Q ss_pred --CCeEEEEccCC--cEEEEeccCC-----ccccCCccEEEcCC-CcEEEEeCcCC----cCcc-cce------------
Q 030700 70 --QQGLLKVSEEG--VTVLVSQFNG-----SQLRFANDVIEASD-GSLYFTVSSTK----FTPA-EYY------------ 122 (173)
Q Consensus 70 --~~~i~~~~~~g--~~~~~~~~~~-----~~~~~~~~l~~~~d-G~~~v~~~~~~----~~~~-~~~------------ 122 (173)
.+.|.+++.+| ...+.....+ ..+..|++|+++++ |++||++...+ +... ...
T Consensus 163 ~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 163 YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC
T ss_pred CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC
Confidence 35688888888 3444322221 24567999999998 89999986532 1111 000
Q ss_pred ----------------eeecccCCCceEEEEcCCCCeeEEee----ccccCcceEEEccCCCEEEEEecC
Q 030700 123 ----------------LDLVSGEPHGVLLKYDPSTNQTSLVL----DGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 123 ----------------~~~~~~~~~~~v~~~d~~~~~~~~~~----~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
...+......+++.++..++++.... ..+..|.+|+++||| .|||++..
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~ 311 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAH 311 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESS
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECC
Confidence 00111223347888887777655553 347889999999999 79999864
No 15
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.78 E-value=1.5e-17 Score=130.67 Aligned_cols=140 Identities=16% Similarity=0.146 Sum_probs=109.8
Q ss_pred ccCCcceEEEcCC---CCEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC-----CeEEEEcc
Q 030700 8 IVNHPEDVSVDGN---GVLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-----QGLLKVSE 78 (173)
Q Consensus 8 ~~~~p~~l~~~~~---g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-----~~i~~~~~ 78 (173)
.+..|.+|+++|+ |.||+++..++|+++++ +|.+..+......|. +|+++++|++ |+++.. .+++.++.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~l-yVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDM-VVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCE-EEEECCSCTTSEEEEEECG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCE-EEEcCCCCcccceEEEEEC
Confidence 6889999999984 89999995589999997 677777766677899 9999999996 999863 25777775
Q ss_pred CC-cE---EEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee-EEeec--c
Q 030700 79 EG-VT---VLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT-SLVLD--G 150 (173)
Q Consensus 79 ~g-~~---~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~--~ 150 (173)
++ .. .+. .+..|+++++++ +|+|||++.. +++|++++++++.. ..+.. .
T Consensus 215 ~~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~ 271 (433)
T 4hw6_A 215 ASGFTERLSLC------NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDT 271 (433)
T ss_dssp GGTTCCEEEEE------ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSC
T ss_pred CCCeecccccc------ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCC
Confidence 44 22 222 247899999999 8999999743 36999999987765 33332 2
Q ss_pred ccCcceEEEccCCCEEEEEecC
Q 030700 151 LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
...+.+|+|+|++++|||+++.
T Consensus 272 ~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 272 KGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp CSSCEEEEECTTSSEEEEEETT
T ss_pred CCCcccEEEeCCCCEEEEEeCC
Confidence 3456789999999999999974
No 16
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.77 E-value=4.2e-17 Score=133.36 Aligned_cols=144 Identities=16% Similarity=0.123 Sum_probs=114.0
Q ss_pred ccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCc-EEEecc-ccCccccceEEccCCcEEEEEeCC-CeEEEEccCC--
Q 030700 8 IVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGT-WEDWHQ-VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-- 80 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~-~~~~~~-~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-- 80 (173)
.+..|.+|++|+ ++.||++| .+++|++++.+|. ...+.. ....|. ||++|+.++.||+++.. +.|.+++.+|
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred CCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEecCCCc
Confidence 367899999998 67999999 7789999998874 333333 346799 99999765444999987 4677788888
Q ss_pred cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVAL 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~ 159 (173)
.+.+.. ..+..|++|++|| +|.|||+|.. ..++|+++++++...+.+..++..|+||++
T Consensus 114 ~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~Glal 173 (628)
T 4a0p_A 114 RQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANGLTI 173 (628)
T ss_dssp CEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEEEEE
T ss_pred EEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcceEEE
Confidence 444432 2346899999998 6899999853 136999999997777777788999999999
Q ss_pred ccCCCEEEEEecC
Q 030700 160 SEDERFLVVCESW 172 (173)
Q Consensus 160 ~~dg~~lyv~~~~ 172 (173)
+++++.|||+|+.
T Consensus 174 D~~~~~LY~aD~~ 186 (628)
T 4a0p_A 174 DYAKRRLYWTDLD 186 (628)
T ss_dssp ETTTTEEEEEETT
T ss_pred ccccCEEEEEECC
Confidence 9999999999974
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.77 E-value=6.2e-17 Score=118.90 Aligned_cols=144 Identities=17% Similarity=0.174 Sum_probs=107.5
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcE-EEec-cccCccccceEEccCCcEEEEEeCC-CeEEEEccCC--c
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTW-EDWH-QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG--V 81 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~-~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g--~ 81 (173)
...|+++++++ ++.||+++ ..++|++++.+|.. ..+. .....|. +++++++++.+|+++.. +.|.+++.+| .
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 45689999998 57999999 67899999987753 3332 2346899 99999865445999976 4688888777 3
Q ss_pred EEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceEEE
Q 030700 82 TVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGVAL 159 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi~~ 159 (173)
+.+... .+..|++++++| +|++||++.. ...++|+++++++...+.+. ..+..|+||++
T Consensus 114 ~~~~~~----~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~ 174 (267)
T 1npe_A 114 RVLFDT----GLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTF 174 (267)
T ss_dssp EEEECS----SCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEE
T ss_pred EEEEEC----CCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEE
Confidence 444321 236899999999 5789999743 12368999998854444443 45788999999
Q ss_pred ccCCCEEEEEecC
Q 030700 160 SEDERFLVVCESW 172 (173)
Q Consensus 160 ~~dg~~lyv~~~~ 172 (173)
+++++.|||+++.
T Consensus 175 d~~~~~lyv~d~~ 187 (267)
T 1npe_A 175 DAFSSQLCWVDAG 187 (267)
T ss_dssp ETTTTEEEEEETT
T ss_pred cCCCCEEEEEECC
Confidence 9999999999874
No 18
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.76 E-value=7.2e-17 Score=122.05 Aligned_cols=147 Identities=15% Similarity=0.171 Sum_probs=107.6
Q ss_pred ccCCcceEEEcCCCCEEEEcCCC-------------------------eEEEEcCC-CcEEEecc--ccCccccceEEcc
Q 030700 8 IVNHPEDVSVDGNGVLYTATGDG-------------------------WIKRMHPN-GTWEDWHQ--VGSQSLLGLTTTK 59 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~~~~~~-------------------------~i~~~~~~-g~~~~~~~--~~~~p~~gl~~~~ 59 (173)
.+..|.+|+++++|++|+++... .|+++|++ |++..... ....|. ++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSIDT 100 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEECT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEECC
Confidence 57889999999999999998433 69999974 77654322 235799 999999
Q ss_pred CCcEEEEEeCC-CeEEEEccCC-c---EEEEecc----CCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccC
Q 030700 60 ENNVIIVCDSQ-QGLLKVSEEG-V---TVLVSQF----NGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGE 129 (173)
Q Consensus 60 ~g~l~~v~~~~-~~i~~~~~~g-~---~~~~~~~----~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~ 129 (173)
+|++ |+++.. +.|.+++.+| . ..+.... ....+..|++|+++| +|++||++..
T Consensus 101 ~g~l-~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~---------------- 163 (329)
T 3fvz_A 101 DGNY-WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY---------------- 163 (329)
T ss_dssp TSCE-EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------
T ss_pred CCCE-EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------
Confidence 9997 999876 4677888776 3 2222110 023356899999999 8999999841
Q ss_pred CCceEEEEcCCCCeeEEee----------ccccCcceEEEccCCCEEEEEecC
Q 030700 130 PHGVLLKYDPSTNQTSLVL----------DGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 130 ~~~~v~~~d~~~~~~~~~~----------~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.+++|.++++++..+..+. ..+..|++|+++|++..|||++..
T Consensus 164 ~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 164 CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 2368999998744444332 135669999999997789999864
No 19
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=4.3e-17 Score=127.95 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=109.6
Q ss_pred ccCCcceEEEcC--CCCEEEEcCCCeEEEEcCCC-cEEEeccccCccccceEEccCCcEEEEEeCCC-----eEEEEccC
Q 030700 8 IVNHPEDVSVDG--NGVLYTATGDGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-----GLLKVSEE 79 (173)
Q Consensus 8 ~~~~p~~l~~~~--~g~l~~~~~~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-----~i~~~~~~ 79 (173)
.+..|.+|+++| +|+||+++..++|+++++++ .+..+......|. +|+++++|+.||+++... .++.++.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 478999999997 48999999558899999876 4556656667899 999999999669999742 46666666
Q ss_pred C-cE---EEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--ccc
Q 030700 80 G-VT---VLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GLY 152 (173)
Q Consensus 80 g-~~---~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~ 152 (173)
| .. .+. .+.+|++++++| +|.+||++.. .++|++++++++....+.. ...
T Consensus 214 g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 214 SGFKVITELT------KGQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp GTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSS
T ss_pred Cceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCC
Confidence 6 32 222 246899999999 8999999753 3699999998776533322 346
Q ss_pred CcceEEEccCCCEEEEEecC
Q 030700 153 FANGVALSEDERFLVVCESW 172 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~~~~ 172 (173)
.|++|+|+|+|++|||++..
T Consensus 271 ~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp CCEEEEECTTSSEEEEEETT
T ss_pred cceeEEEcCCCCEEEEEECC
Confidence 79999999999999999864
No 20
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.76 E-value=8.9e-17 Score=120.52 Aligned_cols=139 Identities=19% Similarity=0.253 Sum_probs=108.1
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC-C--eEEEEc-cCC-cEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-Q--GLLKVS-EEG-VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~--~i~~~~-~~g-~~~ 83 (173)
..|++++++++|+||+++ .+++|++++++|+...+......|+ ||+++++|++ |+++.. + .+++++ .+| .+.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l-~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDL-VATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCE-EEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcE-EEEeccCCcceEEEEcCCCCeEEE
Confidence 679999999999999999 7789999999888766656667899 9999999997 999854 2 478877 577 665
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe-----------ecccc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV-----------LDGLY 152 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-----------~~~~~ 152 (173)
+..... ...+++++..+++++|+++.. .++||++|+.+++..+. ...+.
T Consensus 110 ~~~~~~---~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 110 LLTLPD---AIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEECTT---CSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EEeCCC---ccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 554322 246788888888889998742 36999999976533222 13467
Q ss_pred CcceEEEccCCCEEEEEecC
Q 030700 153 FANGVALSEDERFLVVCESW 172 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~~~~ 172 (173)
.|||| ++|+++|||+++.
T Consensus 170 ~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp SEEEE--EEETTEEEEEETT
T ss_pred cCCCc--CcCCCEEEEEeCC
Confidence 89998 8999999999975
No 21
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.76 E-value=1.2e-16 Score=121.67 Aligned_cols=163 Identities=16% Similarity=0.194 Sum_probs=114.7
Q ss_pred ceecCCccCCcceEEEcCCCCEEEEcC-CCeEEEEcCC-CcEEEec-------cccCccccceEEccC----CcEEEEEe
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTATG-DGWIKRMHPN-GTWEDWH-------QVGSQSLLGLTTTKE----NNVIIVCD 68 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~~~-~~~i~~~~~~-g~~~~~~-------~~~~~p~~gl~~~~~----g~l~~v~~ 68 (173)
+.++++ +..|.++++.|+|.|||+.. .|+|++++.+ |+...+. .....+. ||+++|+ +.+ |++.
T Consensus 25 ~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~l-Yv~y 101 (347)
T 3das_A 25 RTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMV-YAYF 101 (347)
T ss_dssp EEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEE-EEEE
T ss_pred EEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEE-EEEE
Confidence 567777 89999999999999999996 8999999864 5543321 2234678 9999984 666 9874
Q ss_pred C---CCeEEEEcc-C-----C----cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEE
Q 030700 69 S---QQGLLKVSE-E-----G----VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLL 135 (173)
Q Consensus 69 ~---~~~i~~~~~-~-----g----~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 135 (173)
. .++|+++.. . . .+.+.........+....|+++|||.|||+....... ..... .....|+|+
T Consensus 102 t~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~--~~~qd--~~~~~G~Il 177 (347)
T 3das_A 102 TSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDT--GLSQD--RKSLGGKIL 177 (347)
T ss_dssp ECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCG--GGTTC--TTCSTTCEE
T ss_pred ecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCC--ccccC--CCCCCCEEE
Confidence 2 346888763 2 1 3444443333334677889999999999996432110 00000 113458999
Q ss_pred EEcCCCC--------eeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 136 KYDPSTN--------QTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 136 ~~d~~~~--------~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
|+++++. ..+.++.++++|.||+|+|+|+ ||++|.+
T Consensus 178 Ri~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g 221 (347)
T 3das_A 178 RMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFG 221 (347)
T ss_dssp EECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECC
T ss_pred EEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecC
Confidence 9999854 3467888999999999999875 9999875
No 22
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.75 E-value=6.6e-17 Score=120.61 Aligned_cols=143 Identities=15% Similarity=0.224 Sum_probs=107.9
Q ss_pred cCCcceEEEcCCCCEEEEc------------CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC-CeEEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT------------GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLK 75 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~------------~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~ 75 (173)
...|.+++++++|++|+++ ..+.|++++++|+...+......|+ |++++++++.+|+++.. +.|++
T Consensus 97 ~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pn-gi~~spdg~~lyv~~~~~~~i~~ 175 (297)
T 3g4e_A 97 NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISN-GLDWSLDHKIFYYIDSLSYSVDA 175 (297)
T ss_dssp SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEE-EEEECTTSCEEEEEEGGGTEEEE
T ss_pred CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeecccccc-ceEEcCCCCEEEEecCCCCcEEE
Confidence 3568899999999999986 2357999998888776666667899 99999999877999875 45776
Q ss_pred Ec---cCC-cE---EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 76 VS---EEG-VT---VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 76 ~~---~~g-~~---~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
++ .+| .. .+... . .....|++|++|++|++|+++.. .++|++||++++++....
T Consensus 176 ~~~d~~~G~~~~~~~~~~~-~-~~~~~p~g~~~d~~G~lwva~~~-----------------~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 176 FDYDLQTGQISNRRSVYKL-E-KEEQIPDGMCIDAEGKLWVACYN-----------------GGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp EEECTTTCCEEEEEEEEEC-C-GGGCEEEEEEEBTTSCEEEEEET-----------------TTEEEEECTTTCCEEEEE
T ss_pred EeccCCCCcccCcEEEEEC-C-CCCCCCCeeEECCCCCEEEEEcC-----------------CCEEEEEcCCCceEEEEE
Confidence 65 355 32 22221 1 11247899999999999999632 368999999877654443
Q ss_pred -ccccCcceEEEc-cCCCEEEEEec
Q 030700 149 -DGLYFANGVALS-EDERFLVVCES 171 (173)
Q Consensus 149 -~~~~~p~gi~~~-~dg~~lyv~~~ 171 (173)
.....|..++|+ ||+++|||+..
T Consensus 237 ~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 237 KLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp ECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred ECCCCCceEEEEeCCCCCEEEEEcC
Confidence 334678999998 89999999875
No 23
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.75 E-value=1.3e-16 Score=130.30 Aligned_cols=144 Identities=17% Similarity=0.175 Sum_probs=108.6
Q ss_pred ccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcE--EE-eccccCccccceEEccCCcEEEEEeCCC-eEEEEccCC-
Q 030700 8 IVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTW--ED-WHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSEEG- 80 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~--~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~~g- 80 (173)
.+..|.+|++++ ++.||++| .+++|++++.+|.. .. +......|. ||++|+.++.||+++... .|.+++.+|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 378899999998 77999999 67899999988752 23 333346899 999998555459999774 577777888
Q ss_pred -cEEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGV 157 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi 157 (173)
.+.+.. ..+..|++|++||. |.|||||.. ..++|++.++++...+.+. ..+..|+||
T Consensus 117 ~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 117 LRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp SCEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 444442 23478999999995 789999854 1258999999865554444 468999999
Q ss_pred EEccCCCEEEEEecC
Q 030700 158 ALSEDERFLVVCESW 172 (173)
Q Consensus 158 ~~~~dg~~lyv~~~~ 172 (173)
+++++++.|||+|+.
T Consensus 177 ald~~~~~LY~aD~~ 191 (619)
T 3s94_A 177 TLDYEEQKLYWADAK 191 (619)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEEccCCEEEEEeCC
Confidence 999998999999964
No 24
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.75 E-value=2.6e-16 Score=118.38 Aligned_cols=148 Identities=24% Similarity=0.382 Sum_probs=111.2
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEEEec-cccCccccceEEccCCcEEEEEeCCC-----eEEEEccCC
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWEDWH-QVGSQSLLGLTTTKENNVIIVCDSQQ-----GLLKVSEEG 80 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~~-----~i~~~~~~g 80 (173)
...|++++++++|.||+++ .++.|++++++ ++...+. .....+. +++++++|++ |++.... ++++++.++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l-~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRL-FVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCE-EEEECTTSSSCCEEEEECTTS
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcE-EEEeCCCCCCCceEEEEeCCC
Confidence 5779999999999999876 67889999975 5555443 3456788 9999999998 8877554 788888755
Q ss_pred --cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEE
Q 030700 81 --VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVA 158 (173)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~ 158 (173)
...+.... .....+++++++|+|++|+++.... .....+.|+++++++++...+......|++++
T Consensus 122 ~~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 188 (333)
T 2dg1_A 122 DNLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIA 188 (333)
T ss_dssp CSCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEE
T ss_pred CEEEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceE
Confidence 44333211 1235789999999999999874310 01134689999998777776666677899999
Q ss_pred EccCCCEEEEEec
Q 030700 159 LSEDERFLVVCES 171 (173)
Q Consensus 159 ~~~dg~~lyv~~~ 171 (173)
|+|||+.||++++
T Consensus 189 ~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 189 LSTDEKVLWVTET 201 (333)
T ss_dssp ECTTSSEEEEEEG
T ss_pred ECCCCCEEEEEeC
Confidence 9999999999875
No 25
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.75 E-value=1.9e-16 Score=132.14 Aligned_cols=148 Identities=13% Similarity=0.087 Sum_probs=110.6
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCc-----EEEec-cccCccccceEEccCCcEEEEEeCC-CeE
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGT-----WEDWH-QVGSQSLLGLTTTKENNVIIVCDSQ-QGL 73 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~-----~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~-~~i 73 (173)
++..+ +..|.+|++++ ++.||+++ ..++|++++.+|. ...+. .....|. ||++|+.++.|||++.. +.|
T Consensus 418 ~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 418 SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp EEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEE
T ss_pred eeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeE
Confidence 34455 78899999998 78999999 6788999987763 22332 3457899 99999877555999987 467
Q ss_pred EEEccCC--cEEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-c
Q 030700 74 LKVSEEG--VTVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-D 149 (173)
Q Consensus 74 ~~~~~~g--~~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~ 149 (173)
.+++.+| .+.+.. ..+..|++|++||. |.|||+|.. ..++|+++++++...+.+. .
T Consensus 496 ~v~~ldG~~~~~l~~----~~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 496 SVADTKGVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTSSSEEEEEE----CTTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECS
T ss_pred EEEeCCCCeEEEEEe----CCCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeC
Confidence 7778888 444433 22467999999995 789999854 1258999999865554444 4
Q ss_pred cccCcceEEEccCCCEEEEEecC
Q 030700 150 GLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
++..|+||++++.++.|||+|..
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCCceEEEEecCCCeEEEEeCC
Confidence 58999999999988899999864
No 26
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.74 E-value=2.1e-16 Score=119.51 Aligned_cols=155 Identities=14% Similarity=0.148 Sum_probs=113.6
Q ss_pred ceecCCccCCcceEEEcCC-CCEEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-
Q 030700 2 IKLGEGIVNHPEDVSVDGN-GVLYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~-g~l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~- 78 (173)
|++.+.....+|+++|+++ +.+|+++ .++.|+++++++...........+. +++++++|++ |++. ..++++++.
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~-~i~~~~dg~l-~v~~-~~gl~~~d~~ 117 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGS-ALAKISDSKQ-LIAS-DDGLFLRDTA 117 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEE-EEEEEETTEE-EEEE-TTEEEEEETT
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcce-EEEEeCCCeE-EEEE-CCCEEEEECC
Confidence 5666665677999999995 6888887 6788999997654333223345788 9999999998 7765 457999986
Q ss_pred CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceE
Q 030700 79 EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGV 157 (173)
Q Consensus 79 ~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi 157 (173)
+| .+.+.....+.+...+++++++++|++|+++.... .....+.|++++ + ++...+......|+++
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~~i 184 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPNSI 184 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccCCe
Confidence 56 55554432233345789999999999999863210 012347899999 4 7777666667789999
Q ss_pred EEccCCCEEEEEecC
Q 030700 158 ALSEDERFLVVCESW 172 (173)
Q Consensus 158 ~~~~dg~~lyv~~~~ 172 (173)
+|+||++.||++++.
T Consensus 185 ~~s~dg~~lyv~~~~ 199 (326)
T 2ghs_A 185 CFSPDGTTGYFVDTK 199 (326)
T ss_dssp EECTTSCEEEEEETT
T ss_pred EEcCCCCEEEEEECC
Confidence 999999999999753
No 27
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.74 E-value=1.4e-16 Score=120.44 Aligned_cols=141 Identities=14% Similarity=0.181 Sum_probs=108.3
Q ss_pred ccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEE--eccccCccccceEEccCCcEEEEEeCC--CeEEEEccCC-
Q 030700 8 IVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWED--WHQVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKVSEEG- 80 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~--~~~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~~~~g- 80 (173)
.+..|+++++|+ +|.||+++ ..++|.+++.+|.... .......|. ||++++.+..+|+++.+ ..|.+++.+|
T Consensus 77 ~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~-giavdp~~g~ly~td~~~~~~I~r~~~dG~ 155 (318)
T 3sov_A 77 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPR-AIALDPSSGFMYWTDWGEVPKIERAGMDGS 155 (318)
T ss_dssp CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE-EEEEEGGGTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCcc-EEEEeCCCCEEEEEecCCCCEEEEEEcCCC
Confidence 478899999997 78999999 6789999998885432 224567899 99999864444999964 5799999888
Q ss_pred -cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCcceE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFANGV 157 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p~gi 157 (173)
.+.+.. ..+..|++|++|+ +++|||+|.. .++|++++.++...+.+.. .+..|.||
T Consensus 156 ~~~~~~~----~~l~~Pnglavd~~~~~lY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~~P~gl 214 (318)
T 3sov_A 156 SRFIIIN----SEIYWPNGLTLDYEEQKLYWADAK-----------------LNFIHKSNLDGTNRQAVVKGSLPHPFAL 214 (318)
T ss_dssp SCEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSCCSCEEEE
T ss_pred CeEEEEE----CCCCCccEEEEeccCCEEEEEECC-----------------CCEEEEEcCCCCceEEEecCCCCCceEE
Confidence 444432 1247899999998 5679999854 3699999998666665655 58999999
Q ss_pred EEccCCCEEEEEecC
Q 030700 158 ALSEDERFLVVCESW 172 (173)
Q Consensus 158 ~~~~dg~~lyv~~~~ 172 (173)
++. +..+||++..
T Consensus 215 av~--~~~lywtd~~ 227 (318)
T 3sov_A 215 TLF--EDILYWTDWS 227 (318)
T ss_dssp EEE--TTEEEEEETT
T ss_pred EEe--CCEEEEEecC
Confidence 995 4479999864
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=5.3e-16 Score=120.98 Aligned_cols=146 Identities=15% Similarity=0.167 Sum_probs=107.7
Q ss_pred ccCCcceEEEcC-CCCEEEEcCCCeEEEEcCCCc-EEEe----ccc--cCccccceEEccC-CcEEEEEeCC-CeEEEEc
Q 030700 8 IVNHPEDVSVDG-NGVLYTATGDGWIKRMHPNGT-WEDW----HQV--GSQSLLGLTTTKE-NNVIIVCDSQ-QGLLKVS 77 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~~~~~i~~~~~~g~-~~~~----~~~--~~~p~~gl~~~~~-g~l~~v~~~~-~~i~~~~ 77 (173)
....|.+++++| +|.||+++.+++|+++++++. ...+ ... ...|.++|+++++ +++ |+++.. +.|++++
T Consensus 217 ~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l-yv~d~~~~~I~~~~ 295 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNF-YMSDQNLSSVYKIT 295 (409)
T ss_dssp SCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEE-EEEETTTTEEEEEC
T ss_pred hcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEE-EEEeCCCCEEEEEe
Confidence 357899999999 899999888889999997653 3333 111 1123229999995 666 999976 4688888
Q ss_pred cCC-cEEEEecc--CC--------ccccCCccEEEcCCCcEEEEeC-cCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 78 EEG-VTVLVSQF--NG--------SQLRFANDVIEASDGSLYFTVS-STKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 78 ~~g-~~~~~~~~--~~--------~~~~~~~~l~~~~dG~~~v~~~-~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
.+| ...+.... .+ ..+..|++|+++++|++||+|. . +++|.++++.++++.
T Consensus 296 ~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----------------~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 296 PDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----------------GYCLRKLDILDGYVS 358 (409)
T ss_dssp TTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----------------TCEEEEEETTTTEEE
T ss_pred cCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----------------CCEEEEEECCCCEEE
Confidence 888 55554321 01 2267899999999999999985 3 368999996567776
Q ss_pred Eeecc---------------ccCcceEEEccCCCEEEEEecC
Q 030700 146 LVLDG---------------LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 146 ~~~~~---------------~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.++.. +..|.||+++++| .|||+|..
T Consensus 359 ~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~ 399 (409)
T 3hrp_A 359 TVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAW 399 (409)
T ss_dssp EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEEST
T ss_pred EEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECC
Confidence 66543 6789999999995 69999875
No 29
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.72 E-value=9.4e-16 Score=115.68 Aligned_cols=145 Identities=16% Similarity=0.169 Sum_probs=108.4
Q ss_pred ecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEE-Eec-cccCccccceEEccCCcEEEEEeCC--CeEEEEc
Q 030700 4 LGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWE-DWH-QVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKVS 77 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~-~~~-~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~~ 77 (173)
+....+..|+++++|+ +++||+++ ..++|.+++.+|+.. .+. .....|. ++++|+.+..+|+++.+ ..|.+++
T Consensus 71 ~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~-~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 71 VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE-EEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcc-eEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 3334478999999997 77999998 678999999888633 332 3456899 99999855445999976 4688888
Q ss_pred cCC-c-EEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec---cc
Q 030700 78 EEG-V-TVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD---GL 151 (173)
Q Consensus 78 ~~g-~-~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~ 151 (173)
.+| . +.+.. ..+..|++|++|++ ++|||+|.. .++|+++|.++...+.+.. .+
T Consensus 150 ~dG~~~~~~~~----~~~~~P~gla~d~~~~~lY~~D~~-----------------~~~I~~~d~dg~~~~~~~~~~~~~ 208 (316)
T 1ijq_A 150 LNGVDIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKRL 208 (316)
T ss_dssp TTSCCEEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEEECTTTT
T ss_pred CCCCCeEEEEE----CCCCCceEEEEeccCCEEEEEECC-----------------CCeEEEEecCCCceEEEeecCCcc
Confidence 888 3 33332 13478999999985 579999854 3699999998655555543 36
Q ss_pred cCcceEEEccCCCEEEEEecC
Q 030700 152 YFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~~~~ 172 (173)
..|.||+++ +..|||++..
T Consensus 209 ~~P~giav~--~~~ly~~d~~ 227 (316)
T 1ijq_A 209 AHPFSLAVF--EDKVFWTDII 227 (316)
T ss_dssp SSEEEEEEE--TTEEEEEETT
T ss_pred CCcEEEEEE--CCEEEEEECC
Confidence 889999995 4579999853
No 30
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.72 E-value=8.7e-16 Score=113.31 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=107.6
Q ss_pred ecCCccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEec---cccCccccceEEccCCcEEEEEeCC-CeEEEEcc
Q 030700 4 LGEGIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWH---QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE 78 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~---~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~ 78 (173)
+.......|.+++++++|++|+++ .+++|++++++|+..... .....|. +|+++++|++ |+++.. +.|.+++.
T Consensus 115 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~-~i~~~~~g~l-~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 115 FGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPN-GVVVNDKQEI-FISDNRAHCVKVFNY 192 (286)
T ss_dssp ECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEE-EEEECSSSEE-EEEEGGGTEEEEEET
T ss_pred ecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcE-EEEECCCCCE-EEEECCCCEEEEEcC
Confidence 333445789999999999999998 568899999888755432 2335689 9999999997 998865 56888887
Q ss_pred CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCc-eEEEEcCCCCeeEEeecc--ccC
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHG-VLLKYDPSTNQTSLVLDG--LYF 153 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~-~v~~~d~~~~~~~~~~~~--~~~ 153 (173)
+| ...+.. .+ .+..|.+|+++++|++|+++.. ++ +|.+|++++..+..+... ...
T Consensus 193 ~g~~~~~~~~--~g-~~~~p~~i~~d~~G~l~v~~~~-----------------~~~~i~~~~~~g~~~~~~~~~~~~~~ 252 (286)
T 1q7f_A 193 EGQYLRQIGG--EG-ITNYPIGVGINSNGEILIADNH-----------------NNFNLTIFTQDGQLISALESKVKHAQ 252 (286)
T ss_dssp TCCEEEEESC--TT-TSCSEEEEEECTTCCEEEEECS-----------------SSCEEEEECTTSCEEEEEEESSCCSC
T ss_pred CCCEEEEEcc--CC-ccCCCcEEEECCCCCEEEEeCC-----------------CCEEEEEECCCCCEEEEEcccCCCCc
Confidence 77 333321 11 2357999999999999999743 23 899999875555555443 345
Q ss_pred cceEEEccCCCEEEEEec
Q 030700 154 ANGVALSEDERFLVVCES 171 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~~~ 171 (173)
|.+|+++|+|+ |||++.
T Consensus 253 ~~~i~~~~~g~-l~vs~~ 269 (286)
T 1q7f_A 253 CFDVALMDDGS-VVLASK 269 (286)
T ss_dssp EEEEEEETTTE-EEEEET
T ss_pred ceeEEECCCCc-EEEECC
Confidence 88999999995 888863
No 31
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.72 E-value=2.7e-16 Score=124.12 Aligned_cols=167 Identities=12% Similarity=0.145 Sum_probs=114.3
Q ss_pred ceecCCccCCcceEEEcCCCCEEEEcCCC-eEEEEcC-CCcEEEec---c------ccCccccceEEcc----CCcEEEE
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTATGDG-WIKRMHP-NGTWEDWH---Q------VGSQSLLGLTTTK----ENNVIIV 66 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~~~~~-~i~~~~~-~g~~~~~~---~------~~~~p~~gl~~~~----~g~l~~v 66 (173)
+.++.+ +..|.+++++|+|+|||++..+ +|++++. +|....+. . ....+. ||+++| ++.+ |+
T Consensus 20 ~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~l-Yv 96 (454)
T 1cru_A 20 KVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYI-YI 96 (454)
T ss_dssp EEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEE-EE
T ss_pred EEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEE-EE
Confidence 567777 8999999999999999999664 7999985 46554332 1 124567 999998 4555 99
Q ss_pred EeCC-------------CeEEEEcc---CC----cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCc-----ccc
Q 030700 67 CDSQ-------------QGLLKVSE---EG----VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTP-----AEY 121 (173)
Q Consensus 67 ~~~~-------------~~i~~~~~---~g----~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~-----~~~ 121 (173)
+... ..|+++.. ++ .+.+.........+.+++|+++|||+|||+........ .+.
T Consensus 97 ~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~ 176 (454)
T 1cru_A 97 SGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPN 176 (454)
T ss_dssp EEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCC
T ss_pred EEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccccc
Confidence 8742 35777763 22 23344333333346789999999999999965422110 000
Q ss_pred --e--------eeecccCCCceEEEEcCCCC-----------eeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 122 --Y--------LDLVSGEPHGVLLKYDPSTN-----------QTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 122 --~--------~~~~~~~~~~~v~~~d~~~~-----------~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
. ...-.....|+|+|+++++. ..+.++.++++|.||+|+|+|+ ||++|.+
T Consensus 177 ~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g 247 (454)
T 1cru_A 177 QAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQG 247 (454)
T ss_dssp CTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEEC
T ss_pred ccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecC
Confidence 0 00001123589999999865 4677888999999999999865 9999875
No 32
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.72 E-value=7.7e-16 Score=125.73 Aligned_cols=144 Identities=16% Similarity=0.164 Sum_probs=109.9
Q ss_pred ccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCc-EEEec-cccCccccceEEccCCcEEEEEeCCC-eEEEEccCC--
Q 030700 8 IVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGT-WEDWH-QVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSEEG-- 80 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~-~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~~g-- 80 (173)
.+..|.+|++|+ ++.||++| ..++|++++++|. .+.+. .....|. ||++|..++.||+++... .|.+++.+|
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 377899999998 78999999 6789999998874 33333 3356899 999997444349999874 566666777
Q ss_pred cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceEE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGVA 158 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi~ 158 (173)
.+.+.. ..+..|++|+++| +|.|||+|.. ...+|+++++++.....+. ..+..|+||+
T Consensus 426 ~~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~Gla 485 (619)
T 3s94_A 426 RKILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNGLA 485 (619)
T ss_dssp CEEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCeeeE
Confidence 444442 2357899999999 4899999854 1258999999865444444 4589999999
Q ss_pred EccCCCEEEEEecC
Q 030700 159 LSEDERFLVVCESW 172 (173)
Q Consensus 159 ~~~dg~~lyv~~~~ 172 (173)
++++++.|||+|+.
T Consensus 486 lD~~~~~LY~aD~~ 499 (619)
T 3s94_A 486 LDYDEGKIYWGDAK 499 (619)
T ss_dssp EETTTTEEEEEETT
T ss_pred EcccCCEEEEEECC
Confidence 99988899999975
No 33
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.72 E-value=8.1e-16 Score=117.62 Aligned_cols=146 Identities=16% Similarity=0.194 Sum_probs=108.3
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEE--eccccCccccceEEccCCcEEEEEeCC--CeEEEE
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWED--WHQVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKV 76 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~--~~~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~ 76 (173)
++....+..|+++++|+ +|+||+++ ..++|.+++.+|+... +......|. +|++|+.+..+|+++.. ..|.++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~-~iavdp~~g~ly~td~~~~~~I~r~ 187 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPR-AIALHPMEGTIYWTDWGNTPRIEAS 187 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEE-EEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcc-eEEEecCcCeEEEeccCCCCEEEEE
Confidence 33334478899999997 78999999 6678999998886432 223456899 99999855555999976 468888
Q ss_pred ccCC-c-EEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-cccc
Q 030700 77 SEEG-V-TVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLY 152 (173)
Q Consensus 77 ~~~g-~-~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~ 152 (173)
+.+| . +.+.. ..+..|++|++|+ +++|||+|.. .++|++++.++...+.+. .++.
T Consensus 188 ~~dG~~~~~~~~----~~~~~PnGla~d~~~~~lY~aD~~-----------------~~~I~~~~~dG~~~~~~~~~~~~ 246 (349)
T 3v64_C 188 SMDGSGRRIIAD----THLFWPNGLTIDYAGRRMYWVDAK-----------------HHVIERANLDGSHRKAVISQGLP 246 (349)
T ss_dssp ETTSCSCEESCC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCS
T ss_pred eCCCCCcEEEEE----CCCCCcceEEEeCCCCEEEEEECC-----------------CCEEEEEeCCCCceEEEEeCCCC
Confidence 8888 3 33322 2346899999997 5689999854 368999999865544443 4588
Q ss_pred CcceEEEccCCCEEEEEecC
Q 030700 153 FANGVALSEDERFLVVCESW 172 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~~~~ 172 (173)
.|.||++. +..|||++..
T Consensus 247 ~P~giav~--~~~ly~td~~ 264 (349)
T 3v64_C 247 HPFAITVF--EDSLYWTDWH 264 (349)
T ss_dssp SEEEEEEE--TTEEEEEETT
T ss_pred CceEEEEE--CCEEEEecCC
Confidence 99999993 4579999864
No 34
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=3.7e-16 Score=122.63 Aligned_cols=145 Identities=10% Similarity=0.153 Sum_probs=106.0
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEE-Eec--cccCccccceEEccCCcEEEEEeCC-CeEEEEccCC--
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWE-DWH--QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-- 80 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~-~~~--~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-- 80 (173)
+..|.+++++| +|.||+++ .+++|+++++++... .+. .....|. +|+++++|+.||+++.. +.|.+++.++
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~-gia~~pdG~~lyv~d~~~~~I~~~~~d~~~ 303 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEF-HIQFHPSGNYAYIVVVNQHYILRSDYDWKT 303 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCE-EEEECTTSSEEEEEETTTTEEEEEEEETTT
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcce-eEEEcCCCCEEEEEECCCCEEEEEeCCccc
Confidence 57899999999 89999999 778999999876543 332 2235799 99999999955999876 5677777543
Q ss_pred --c---EEEEecc------C----CccccCCc-cEEE--------cCCCcEEEEeCcCCcCcccceeeecccCCCceEEE
Q 030700 81 --V---TVLVSQF------N----GSQLRFAN-DVIE--------ASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLK 136 (173)
Q Consensus 81 --~---~~~~~~~------~----~~~~~~~~-~l~~--------~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~ 136 (173)
+ ..+.... + ...+..|. ++++ |++|.|||+|.. +++|.+
T Consensus 304 ~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~-----------------n~~I~~ 366 (430)
T 3tc9_A 304 KRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE-----------------NHCIRI 366 (430)
T ss_dssp TEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG-----------------GTEEEE
T ss_pred ccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC-----------------CcEEEE
Confidence 1 2233210 1 12367888 7888 466899999853 358999
Q ss_pred EcCCCCeeEEeecc------------------ccCcceEEEccCCCEEEEEecC
Q 030700 137 YDPSTNQTSLVLDG------------------LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 137 ~d~~~~~~~~~~~~------------------~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
++++ |.+..++.. +..|.||++++++..|||+|+.
T Consensus 367 i~~~-G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 367 LTPQ-GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp ECTT-SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred ECCC-CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECC
Confidence 9976 666555421 5679999999976789999974
No 35
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.71 E-value=1.8e-16 Score=121.42 Aligned_cols=164 Identities=12% Similarity=0.138 Sum_probs=113.6
Q ss_pred ceecCCccCCcceEEEcCCCC-EEEEcCCCeEEEEcCCCcEEE-ec-------cccCccccceEEccC----CcEEEEEe
Q 030700 2 IKLGEGIVNHPEDVSVDGNGV-LYTATGDGWIKRMHPNGTWED-WH-------QVGSQSLLGLTTTKE----NNVIIVCD 68 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~-l~~~~~~~~i~~~~~~g~~~~-~~-------~~~~~p~~gl~~~~~----g~l~~v~~ 68 (173)
+.++.+ +..|.+++++|+|+ |||++..++|++++.+|+... +. .....+. ||+++++ +.+ |++.
T Consensus 11 ~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~l-Yv~~ 87 (353)
T 2g8s_A 11 EVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRI-WLSY 87 (353)
T ss_dssp EEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEE-EEEE
T ss_pred EEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEE-EEEE
Confidence 566665 89999999999999 999998899999988776432 11 1123578 9999984 565 9986
Q ss_pred CC--------CeEEEEcc--C-C-c---EEEEeccCC--ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCC
Q 030700 69 SQ--------QGLLKVSE--E-G-V---TVLVSQFNG--SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPH 131 (173)
Q Consensus 69 ~~--------~~i~~~~~--~-g-~---~~~~~~~~~--~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~ 131 (173)
.. ..|.+++. + + . +.+...... ...+.+++|+++|||.||++...... .+.... .....
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~--~~~~~ 163 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQD--LDKLQ 163 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGGC--TTSCT
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccCC--CCCCC
Confidence 43 35777653 2 2 2 223333221 12356899999999999999754221 110000 12345
Q ss_pred ceEEEEcCCCC-------------eeEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 132 GVLLKYDPSTN-------------QTSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 132 ~~v~~~d~~~~-------------~~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
++|+|+++++. ..+.++.++++|.||+|+|+...||++|.+
T Consensus 164 g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g 217 (353)
T 2g8s_A 164 GKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHG 217 (353)
T ss_dssp TEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecC
Confidence 79999999854 456778889999999999955579999875
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=1.6e-15 Score=111.94 Aligned_cols=142 Identities=15% Similarity=0.232 Sum_probs=106.8
Q ss_pred CCccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEecc-------ccCccccceEE-ccCCcEEEEEeC--CCeEE
Q 030700 6 EGIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWHQ-------VGSQSLLGLTT-TKENNVIIVCDS--QQGLL 74 (173)
Q Consensus 6 ~~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~~-------~~~~p~~gl~~-~~~g~l~~v~~~--~~~i~ 74 (173)
++.+..|.+++++++|.+|+++ .+++|.+++++|+...... ....|. ++++ ++++++ |+++. ...+.
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l-~v~~~~~~~~i~ 103 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDI-IVTERSPTHQIQ 103 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEE-EEEECGGGCEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeE-EEEcCCCCCEEE
Confidence 4567899999999999999987 6788999998887543221 124688 9999 578888 99885 45688
Q ss_pred EEccCC-c-EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee--cc
Q 030700 75 KVSEEG-V-TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL--DG 150 (173)
Q Consensus 75 ~~~~~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~ 150 (173)
+++.+| . ..+. ......|++++++++|++|+++.. +++|+++++++.....+. ..
T Consensus 104 ~~d~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~ 162 (286)
T 1q7f_A 104 IYNQYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKH 162 (286)
T ss_dssp EECTTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTT
T ss_pred EECCCCcEEEEec----CccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCc
Confidence 888777 3 3331 122357899999999999999643 368999998754444443 34
Q ss_pred ccCcceEEEccCCCEEEEEec
Q 030700 151 LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~ 171 (173)
+..|++|+++++|+ +||+++
T Consensus 163 ~~~p~~i~~~~~g~-l~v~~~ 182 (286)
T 1q7f_A 163 LEFPNGVVVNDKQE-IFISDN 182 (286)
T ss_dssp CSSEEEEEECSSSE-EEEEEG
T ss_pred cCCcEEEEECCCCC-EEEEEC
Confidence 67899999999986 999875
No 37
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.71 E-value=1e-15 Score=118.48 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=108.1
Q ss_pred ecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEE--EeccccCccccceEEccCCcEEEEEeCCC--eEEEEc
Q 030700 4 LGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWE--DWHQVGSQSLLGLTTTKENNVIIVCDSQQ--GLLKVS 77 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~--~~~~~~~~p~~gl~~~~~g~l~~v~~~~~--~i~~~~ 77 (173)
+....+..|+++++|+ ++.||+++ ..++|.+++.+|+.. .+......|. +|++++.+..||+++... .|.+++
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~-giavdp~~g~ly~td~~~~~~I~r~~ 231 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPR-AIALHPMEGTIYWTDWGNTPRIEASS 231 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEE-EEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCc-EEEEEcCCCeEEEeccCCCCEEEEEe
Confidence 3344478999999997 78999999 667899999888643 2233456899 999998655559999764 688888
Q ss_pred cCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccC
Q 030700 78 EEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYF 153 (173)
Q Consensus 78 ~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~ 153 (173)
.+| ...+.. ..+..|++|++|+ +++|||+|.. .++|++++.++...+.+. .++..
T Consensus 232 ~dG~~~~~~~~----~~~~~PnGlavd~~~~~lY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~~ 290 (386)
T 3v65_B 232 MDGSGRRIIAD----THLFWPNGLTIDYAGRRMYWVDAK-----------------HHVIERANLDGSHRKAVISQGLPH 290 (386)
T ss_dssp TTSCSCEEEEC----SSCSCEEEEEEEGGGTEEEEEETT-----------------TTEEEEECTTSCSCEEEECSSCSS
T ss_pred CCCCCcEEEEE----CCCCCeeeEEEeCCCCEEEEEECC-----------------CCEEEEEeCCCCeeEEEEECCCCC
Confidence 888 444432 2246899999997 5689999854 368999999865444444 46889
Q ss_pred cceEEEccCCCEEEEEecC
Q 030700 154 ANGVALSEDERFLVVCESW 172 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~~~~ 172 (173)
|.||++ ++..|||++..
T Consensus 291 P~giav--~~~~ly~td~~ 307 (386)
T 3v65_B 291 PFAITV--FEDSLYWTDWH 307 (386)
T ss_dssp EEEEEE--ETTEEEEEETT
T ss_pred ceEEEE--ECCEEEEeeCC
Confidence 999999 34479999864
No 38
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.71 E-value=2.5e-15 Score=110.25 Aligned_cols=143 Identities=15% Similarity=0.134 Sum_probs=106.4
Q ss_pred CCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEE-Eecc-ccCccccceEEccCCcEEEEEeCC---CeEEEEcc
Q 030700 6 EGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWE-DWHQ-VGSQSLLGLTTTKENNVIIVCDSQ---QGLLKVSE 78 (173)
Q Consensus 6 ~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~-~~~~-~~~~p~~gl~~~~~g~l~~v~~~~---~~i~~~~~ 78 (173)
...+..|.++++++ ++.||+++ ..++|.+++.+|+.. .+.. ....|. ++++++++..+|+++.. ..|.+++.
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~-~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPR-GIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEE-EEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCcc-EEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 33468999999998 57999999 668999999887532 2222 346899 99999954444999865 36777887
Q ss_pred CC--cEEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcc
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFAN 155 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~ 155 (173)
+| .+.+.. ..+..|++|++++++ ++||++.. .++|++++++++....+...+..|.
T Consensus 154 dg~~~~~~~~----~~~~~P~gia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~P~ 212 (267)
T 1npe_A 154 DGTNRRILAQ----DNLGLPNGLTFDAFSSQLCWVDAG-----------------THRAECLNPAQPGRRKVLEGLQYPF 212 (267)
T ss_dssp TSCCCEEEEC----TTCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTEEEEEEEEECCCSEE
T ss_pred CCCCcEEEEE----CCCCCCcEEEEcCCCCEEEEEECC-----------------CCEEEEEecCCCceEEEecCCCCce
Confidence 77 344432 124689999999975 79999753 3689999998666666666788899
Q ss_pred eEEEccCCCEEEEEecC
Q 030700 156 GVALSEDERFLVVCESW 172 (173)
Q Consensus 156 gi~~~~dg~~lyv~~~~ 172 (173)
||+++ ++.|||++..
T Consensus 213 gi~~d--~~~lyva~~~ 227 (267)
T 1npe_A 213 AVTSY--GKNLYYTDWK 227 (267)
T ss_dssp EEEEE--TTEEEEEETT
T ss_pred EEEEe--CCEEEEEECC
Confidence 99875 5689999864
No 39
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.70 E-value=1.7e-15 Score=117.77 Aligned_cols=146 Identities=16% Similarity=0.191 Sum_probs=109.5
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEE-e-ccccCccccceEEccCCcEEEEEeCC--CeEEEE
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWED-W-HQVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKV 76 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~-~-~~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~ 76 (173)
++....+..|++|++|+ +++||+++ ..++|.+.+++|+... + ......|. +|++|+.+..||+++.+ ..|.++
T Consensus 152 ~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~-~iavdp~~g~ly~td~~~~~~I~~~ 230 (400)
T 3p5b_L 152 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKG 230 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEE-EEEEETTTTEEEEEECSSSCCEEEE
T ss_pred EEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcc-eEEEecccCeEEEEeCCCCCEEEEE
Confidence 34444578999999998 78999999 6789999999886432 2 23456799 99999865555999965 468888
Q ss_pred ccCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec---c
Q 030700 77 SEEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD---G 150 (173)
Q Consensus 77 ~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~ 150 (173)
+.+| ...+.. ..+..|++|++|+ +++|||+|.. ..+|+++|.++...+.+.. .
T Consensus 231 ~~dG~~~~~~~~----~~l~~P~glavd~~~~~lY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~ 289 (400)
T 3p5b_L 231 GLNGVDIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKR 289 (400)
T ss_dssp ETTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCCCEEEEECSST
T ss_pred eCCCCccEEEEE----CCCCceEEEEEEeCCCEEEEEECC-----------------CCEEEEEeCCCCccEEEEeCCCC
Confidence 8888 444432 2246899999997 4679999854 2689999998766655554 3
Q ss_pred ccCcceEEEccCCCEEEEEecC
Q 030700 151 LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+..|.||++ +++.|||+|..
T Consensus 290 l~~P~gl~v--~~~~lywtd~~ 309 (400)
T 3p5b_L 290 LAHPFSLAV--FEDKVFWTDII 309 (400)
T ss_dssp TSSEEEEEE--ETTEEEEEESS
T ss_pred CCCCEEEEE--eCCEEEEecCC
Confidence 788999998 45579999853
No 40
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.70 E-value=2.1e-15 Score=117.62 Aligned_cols=145 Identities=11% Similarity=0.064 Sum_probs=106.2
Q ss_pred CccCCcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCC--eEEEEccCC--
Q 030700 7 GIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ--GLLKVSEEG-- 80 (173)
Q Consensus 7 ~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~--~i~~~~~~g-- 80 (173)
..+..|.+|+++++|+||+++ .+++|++++++ +.+..+......| .++++++++.||+++... .+++++.++
T Consensus 128 a~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~--~ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 128 AKFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGG--KPAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBC--BCEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred cccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCC--ceeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 357899999999999999998 56899999986 4555554444444 389999998879988753 788888654
Q ss_pred c-EEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe----eccc--c
Q 030700 81 V-TVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV----LDGL--Y 152 (173)
Q Consensus 81 ~-~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~----~~~~--~ 152 (173)
. ..+.. ........|++++++| +|.||+++. +++|+++|++++....+ ..+. .
T Consensus 206 ~~~~~g~-~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 206 APTRIGQ-LGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp CEEEEEE-CCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred eeEEeee-ccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCC
Confidence 3 23321 1111346899999999 789999753 26899999987766555 2221 2
Q ss_pred Ccc-eEEEccCCCEEEEEecC
Q 030700 153 FAN-GVALSEDERFLVVCESW 172 (173)
Q Consensus 153 ~p~-gi~~~~dg~~lyv~~~~ 172 (173)
.|. +|+|+|++..|||+++.
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETT
T ss_pred CccccEEEeCCCCEEEEEeCC
Confidence 345 99999987789999864
No 41
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.70 E-value=2.4e-15 Score=112.47 Aligned_cols=137 Identities=12% Similarity=0.169 Sum_probs=102.6
Q ss_pred cCCcceEEEcCCCCEEEEcC------------------CCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC
Q 030700 9 VNHPEDVSVDGNGVLYTATG------------------DGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~------------------~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~ 69 (173)
+..|.+++++++|++|++|. .+.|+++++ +|++..+. ....|+ |++++++|+.||+++.
T Consensus 130 ~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~-gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 130 LNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPN-GLAFSPDEQTLYVSQT 207 (305)
T ss_dssp CSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEE-EEEECTTSSEEEEEEC
T ss_pred cCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCc-ceEEcCCCCEEEEEec
Confidence 46788999999999999751 367999997 57766655 566899 9999999997799987
Q ss_pred C------CeEEEEccCC--c---EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEc
Q 030700 70 Q------QGLLKVSEEG--V---TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD 138 (173)
Q Consensus 70 ~------~~i~~~~~~g--~---~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 138 (173)
. +.|++++.++ . +.+... ....|++|++|++|++|+++. +.|++|+
T Consensus 208 ~~~~~~~~~i~~~~~~~~~l~~~~~~~~~----~~~~pdgi~~d~~G~lwv~~~-------------------~gv~~~~ 264 (305)
T 3dr2_A 208 PEQGHGSVEITAFAWRDGALHDRRHFASV----PDGLPDGFCVDRGGWLWSSSG-------------------TGVCVFD 264 (305)
T ss_dssp CC---CCCEEEEEEEETTEEEEEEEEECC----SSSCCCSEEECTTSCEEECCS-------------------SEEEEEC
T ss_pred CCcCCCCCEEEEEEecCCCccCCeEEEEC----CCCCCCeEEECCCCCEEEecC-------------------CcEEEEC
Confidence 5 4677777432 2 222221 225789999999999999852 3699999
Q ss_pred CCCCeeEEeeccccCcceEEEccCCCEEEEEec
Q 030700 139 PSTNQTSLVLDGLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 139 ~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
+++.....+.. ...+..++|+++++.||++..
T Consensus 265 ~~g~~~~~~~~-~~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 265 SDGQLLGHIPT-PGTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp TTSCEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred CCCCEEEEEEC-CCceeEEEEeCCCCEEEEEcC
Confidence 97554444443 336889999999999999864
No 42
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.70 E-value=7.1e-16 Score=116.03 Aligned_cols=146 Identities=14% Similarity=0.121 Sum_probs=102.6
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCC-CcEEEe-ccc-------cCccccceEE---ccCCcEEEEEeC-----
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPN-GTWEDW-HQV-------GSQSLLGLTT---TKENNVIIVCDS----- 69 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~-g~~~~~-~~~-------~~~p~~gl~~---~~~g~l~~v~~~----- 69 (173)
-..||+++||+ +|.+|+++ .++.|.+++++ +....+ .+. ...+. ||.+ |++++++++++.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 36799999998 78999999 78999999987 444433 111 11467 9999 789888443552
Q ss_pred --------CCeEEEEccC----C-cEEEEec---cC------CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecc
Q 030700 70 --------QQGLLKVSEE----G-VTVLVSQ---FN------GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVS 127 (173)
Q Consensus 70 --------~~~i~~~~~~----g-~~~~~~~---~~------~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~ 127 (173)
...+++++.+ + ....++. .. ++....+++|++|++|++||++..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 2458888855 6 4433332 11 113346999999999999999743
Q ss_pred cCCCceEEEEcCCCCeeEEeecc------ccCcceEEEccCCCEEEEEec
Q 030700 128 GEPHGVLLKYDPSTNQTSLVLDG------LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 128 ~~~~~~v~~~d~~~~~~~~~~~~------~~~p~gi~~~~dg~~lyv~~~ 171 (173)
+.+.|++++|++..+..+... ...+|||+++|||+.|+++++
T Consensus 157 --~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~ 204 (334)
T 2p9w_A 157 --GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG 204 (334)
T ss_dssp --SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS
T ss_pred --CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC
Confidence 115899999995544444321 344789999999999999876
No 43
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=6.4e-15 Score=109.32 Aligned_cols=139 Identities=18% Similarity=0.277 Sum_probs=104.4
Q ss_pred cCCcceEEEcCCCCEEEEcC------------------CCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC
Q 030700 9 VNHPEDVSVDGNGVLYTATG------------------DGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ 70 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~------------------~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~ 70 (173)
...|.+++++++|++|+++. .+.|++++++|+...+......|+ +++++++|+++ +++..
T Consensus 114 ~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~-gi~~s~dg~~l-v~~~~ 191 (296)
T 3e5z_A 114 LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPN-GLAFLPSGNLL-VSDTG 191 (296)
T ss_dssp CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEE-EEEECTTSCEE-EEETT
T ss_pred CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCc-cEEECCCCCEE-EEeCC
Confidence 45688999999999999752 458999998888776666667899 99999999995 77765
Q ss_pred -CeEEEEcc--CC-c-EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 71 -QGLLKVSE--EG-V-TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 71 -~~i~~~~~--~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
..+++++. +| . ... ... ......|++|+++++|++|+++ . ++|++|++++....
T Consensus 192 ~~~i~~~~~~~~g~~~~~~-~~~-~~~~~~p~~i~~d~~G~l~v~~-~------------------~~v~~~~~~g~~~~ 250 (296)
T 3e5z_A 192 DNATHRYCLNARGETEYQG-VHF-TVEPGKTDGLRVDAGGLIWASA-G------------------DGVHVLTPDGDELG 250 (296)
T ss_dssp TTEEEEEEECSSSCEEEEE-EEE-CCSSSCCCSEEEBTTSCEEEEE-T------------------TEEEEECTTSCEEE
T ss_pred CCeEEEEEECCCCcCcCCC-eEe-eCCCCCCCeEEECCCCCEEEEc-C------------------CeEEEECCCCCEEE
Confidence 46777764 45 5 211 111 1123578999999999999995 2 58999999854444
Q ss_pred EeeccccCcceEEE-ccCCCEEEEEec
Q 030700 146 LVLDGLYFANGVAL-SEDERFLVVCES 171 (173)
Q Consensus 146 ~~~~~~~~p~gi~~-~~dg~~lyv~~~ 171 (173)
.+..... |..++| +||++.||++..
T Consensus 251 ~~~~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 251 RVLTPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp EEECSSC-CCEEEEESTTSCEEEEEET
T ss_pred EEECCCC-ceeEEEECCCCCEEEEEcC
Confidence 4444444 899999 689999999864
No 44
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=3.5e-15 Score=108.85 Aligned_cols=142 Identities=20% Similarity=0.321 Sum_probs=104.6
Q ss_pred ccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcE-EEec-cccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-cE
Q 030700 8 IVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTW-EDWH-QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-VT 82 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~-~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-~~ 82 (173)
.+..|.+++++++|++|+++ .++.|++++..... .... .....|. +|+++++|++ |+++.. .++.+++.++ ..
T Consensus 106 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l-~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 106 GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPD-GVAVDNSGNV-YVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCC-CEEECTTCCE-EEEEGGGTEEEEECTTTCCE
T ss_pred CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCce-eEEEeCCCCE-EEEECCCCEEEEEecCCCce
Confidence 35789999999999999988 56789999754322 2221 2234789 9999999997 998865 5788888766 33
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceEEEcc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGVALSE 161 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi~~~~ 161 (173)
.... . ..+..|.+|+++++|++|+++.. +++|+++++++....... .++..|.+|++++
T Consensus 184 ~~~~-~--~~~~~p~~i~~d~~g~l~v~~~~-----------------~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~ 243 (270)
T 1rwi_B 184 VVLP-F--TDITAPWGIAVDEAGTVYVTEHN-----------------TNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDS 243 (270)
T ss_dssp EECC-C--SSCCSEEEEEECTTCCEEEEETT-----------------TSCEEEECTTCSCCEECCCCSCSCEEEEEECT
T ss_pred Eeec-c--cCCCCceEEEECCCCCEEEEECC-----------------CCcEEEEcCCCCcceeeccCCCCCceeEEECC
Confidence 2211 1 12367899999999999999743 368999999865544333 3467899999999
Q ss_pred CCCEEEEEecC
Q 030700 162 DERFLVVCESW 172 (173)
Q Consensus 162 dg~~lyv~~~~ 172 (173)
+|+ |||++..
T Consensus 244 ~g~-l~v~~~~ 253 (270)
T 1rwi_B 244 DRT-VYVADRG 253 (270)
T ss_dssp TCC-EEEEEGG
T ss_pred CCC-EEEEECC
Confidence 997 9999863
No 45
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.68 E-value=1.8e-15 Score=118.86 Aligned_cols=145 Identities=14% Similarity=0.202 Sum_probs=105.6
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCC-CcE-EEeccc--cCccccceEEccCCcEEEEEeCC-CeEEEEccC--
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPN-GTW-EDWHQV--GSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEE-- 79 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~-g~~-~~~~~~--~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~-- 79 (173)
+..|.++++++ +|.||+++ .+++|++++++ |.. ..+... ...+. +|+++++|+.||+++.. +.|++++.+
T Consensus 227 ~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~-~ia~dpdG~~LYvad~~~~~I~~~~~d~~ 305 (433)
T 4hw6_A 227 ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNF-HIVWHPTGDWAYIIYNGKHCIYRVDYNRE 305 (433)
T ss_dssp CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCE-EEEECTTSSEEEEEETTTTEEEEEEBCTT
T ss_pred cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcc-cEEEeCCCCEEEEEeCCCCEEEEEeCCCC
Confidence 67899999999 89999999 67899999986 665 333222 33566 89999999855999976 568887743
Q ss_pred -C-c---EEEEecc--C--------CccccCCccEEE---------cCCCcEEEEeCcCCcCcccceeeecccCCCceEE
Q 030700 80 -G-V---TVLVSQF--N--------GSQLRFANDVIE---------ASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLL 135 (173)
Q Consensus 80 -g-~---~~~~~~~--~--------~~~~~~~~~l~~---------~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 135 (173)
+ + ..++... . ...+..|.+|++ +++|+|||+|.. +++|.
T Consensus 306 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~-----------------n~~I~ 368 (433)
T 4hw6_A 306 TGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD-----------------SHTVR 368 (433)
T ss_dssp TCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT-----------------TTEEE
T ss_pred CcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC-----------------CCEEE
Confidence 3 2 2333220 1 124678999999 889999999854 35888
Q ss_pred EEcCCCCeeEEeec------------------cccCcceEEEccCCCEEEEEecC
Q 030700 136 KYDPSTNQTSLVLD------------------GLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 136 ~~d~~~~~~~~~~~------------------~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+++++ |.+..++. .+..|.||+++|....|||+|+.
T Consensus 369 ~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~ 422 (433)
T 4hw6_A 369 VLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD 422 (433)
T ss_dssp EECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred EECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC
Confidence 88885 56555542 15679999999555579999974
No 46
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=3.9e-15 Score=108.64 Aligned_cols=138 Identities=17% Similarity=0.298 Sum_probs=100.4
Q ss_pred CcceEEEcCCCCEEE-Ec-CCCeEEEEcCCCcEEEec--cccCccccceEEccCCcEEEEEeCCCeEEEEccCC-cEEEE
Q 030700 11 HPEDVSVDGNGVLYT-AT-GDGWIKRMHPNGTWEDWH--QVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG-VTVLV 85 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~-~~-~~~~i~~~~~~g~~~~~~--~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g-~~~~~ 85 (173)
.|.+++++++|+||+ ++ .++.|++++.++...... .....|. +++++++|++ |+++...++.+++.++ .....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l-~v~~~~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTV-YVTDFNNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCE-EEEETTTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCE-EEEcCCCEEEEEeCCCceEeee
Confidence 999999999999999 86 678899998765433322 2235799 9999999997 9998756788888776 32221
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe-eccccCcceEEEccCCC
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV-LDGLYFANGVALSEDER 164 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~p~gi~~~~dg~ 164 (173)
. ...+..|.+|+++++|++|+++.. .++|++++..+...... ...+..|++|+++++|+
T Consensus 103 ~---~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 103 P---FDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp C---CCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred e---cCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 1 112357899999999999999642 36899998765443322 23457899999999997
Q ss_pred EEEEEec
Q 030700 165 FLVVCES 171 (173)
Q Consensus 165 ~lyv~~~ 171 (173)
+||++.
T Consensus 163 -l~v~~~ 168 (270)
T 1rwi_B 163 -VYVTDT 168 (270)
T ss_dssp -EEEEEG
T ss_pred -EEEEEC
Confidence 999875
No 47
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.67 E-value=4.3e-15 Score=124.05 Aligned_cols=146 Identities=16% Similarity=0.189 Sum_probs=108.0
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEE-ec-cccCccccceEEccCCcEEEEEeCC--CeEEEE
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWED-WH-QVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKV 76 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~-~~-~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~ 76 (173)
++....+..|++||+|. .++||+++ ..++|.+++.+|+..+ +. .....|. ||++++.+..|||++.+ ..|.++
T Consensus 464 ~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~-gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 464 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEE-EEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcc-eEEEecCCCCEEEecCCCCCeEEEE
Confidence 34444588999999998 55999999 6789999999886433 22 3456799 99999874444999976 468888
Q ss_pred ccCC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec---c
Q 030700 77 SEEG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD---G 150 (173)
Q Consensus 77 ~~~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~ 150 (173)
+.+| ...+.. ..+.+|++|++|+ +|+|||+|.. ..+|+++++++...+.+.. .
T Consensus 543 ~~dG~~~~~lv~----~~l~~P~GLavD~~~~~LYwaD~~-----------------~~~I~~~d~dG~~~~~v~~~~~~ 601 (791)
T 3m0c_C 543 GLNGVDIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKR 601 (791)
T ss_dssp ETTSCCEEEEEC----SSCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEEECTTT
T ss_pred ecCCCceEEEEe----CCCCCceEEEEecCCCeEEEEeCC-----------------CCcEEEEecCCCceEEEecCCCc
Confidence 8888 334432 2246899999996 5789999854 2589999998666555554 2
Q ss_pred ccCcceEEEccCCCEEEEEecC
Q 030700 151 LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+..|.+|++ +++.|||+|..
T Consensus 602 l~~P~glav--~~~~lYwtD~~ 621 (791)
T 3m0c_C 602 LAHPFSLAV--FEDKVFWTDII 621 (791)
T ss_dssp TSSEEEEEE--ETTEEEEEETT
T ss_pred cCCCCEEEE--eCCEEEEEECC
Confidence 667778877 44589999864
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=7.8e-15 Score=110.97 Aligned_cols=148 Identities=14% Similarity=0.091 Sum_probs=105.4
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEEEeccccC------ccccceEEccCCcEEEEEeC--CCeEEEEcc
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWEDWHQVGS------QSLLGLTTTKENNVIIVCDS--QQGLLKVSE 78 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~~~~~~~~------~p~~gl~~~~~g~l~~v~~~--~~~i~~~~~ 78 (173)
...|++++++++|++|+++ .++.|.++|+. +++....+.+. .|. +|++ .++++ |+++. .+.+..+|.
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~l-yv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYV-YVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEE-EEEECTTCCEEEEEET
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEE-EEEcCCCCCEEEEEEC
Confidence 4789999998888999999 78899999964 55554444445 899 9999 56666 99985 456888885
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc--ccCc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG--LYFA 154 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~p 154 (173)
++ ....... + ..|++++++++|++|+++....... ++ ....++|+++|++++++...... ...|
T Consensus 160 ~t~~~~~~i~~--g---~~p~~i~~~~dG~l~v~~~~~~~~~-~~------~~~~~~v~~id~~t~~v~~~~~~~~g~~p 227 (328)
T 3dsm_A 160 ETDKVVDELTI--G---IQPTSLVMDKYNKMWTITDGGYEGS-PY------GYEAPSLYRIDAETFTVEKQFKFKLGDWP 227 (328)
T ss_dssp TTTEEEEEEEC--S---SCBCCCEECTTSEEEEEBCCBCTTC-SS------CBCCCEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCCeEEEEEEc--C---CCccceEEcCCCCEEEEECCCccCC-cc------ccCCceEEEEECCCCeEEEEEecCCCCCc
Confidence 45 3222221 2 4689999999999999875310000 00 01136899999998876543321 3479
Q ss_pred ceEEEccCCCEEEEEec
Q 030700 155 NGVALSEDERFLVVCES 171 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~ 171 (173)
++|+++||+++||+++.
T Consensus 228 ~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN 244 (328)
T ss_dssp EEEEECTTSCEEEEESS
T ss_pred eeEEEecCCCEEEEEcc
Confidence 99999999999999864
No 49
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=1e-14 Score=110.94 Aligned_cols=153 Identities=15% Similarity=0.198 Sum_probs=103.9
Q ss_pred ceecCCccCCcceEEEcCCCCEEEEcC---CC--eEEEEcCCCcEEEecc-------ccCccccceEEccCCcEEEEEeC
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTATG---DG--WIKRMHPNGTWEDWHQ-------VGSQSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~~~---~~--~i~~~~~~g~~~~~~~-------~~~~p~~gl~~~~~g~l~~v~~~ 69 (173)
+++.+.. ..|++++++++|++|++.. ++ +|+.++ +|++..+.. ....|. +++++++|++ |+++.
T Consensus 10 ~~v~~~~-~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L-~v~D~ 85 (343)
T 2qe8_A 10 EVVAELS-LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIV-WMLDN 85 (343)
T ss_dssp EEEEEES-SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEE-EEEECSSSEE-EEEEC
T ss_pred EEEEEcC-CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEee-EEEEcCCCcE-EEEcC
Confidence 3344432 6899999999999999852 23 789888 777665421 134799 9999999998 99986
Q ss_pred C------CeEEEEcc-CC-cEEEEec--cCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEc
Q 030700 70 Q------QGLLKVSE-EG-VTVLVSQ--FNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD 138 (173)
Q Consensus 70 ~------~~i~~~~~-~g-~~~~~~~--~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 138 (173)
+ ..|++++. +| +...... ....+...+++++++++ |.+|+++.+.. ..+.|+++|
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~v~d 151 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAALIRVD 151 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEEEEEE
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeEEEEE
Confidence 5 57888885 56 3322221 11223457899999975 68999985210 124666777
Q ss_pred CCCCeeEEeecc------------------------------ccCcceEEEccCCCEEEEEecC
Q 030700 139 PSTNQTSLVLDG------------------------------LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 139 ~~~~~~~~~~~~------------------------------~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+++++...+..+ ...|+||+|+|||++||++++.
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~ 215 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH 215 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC
Confidence 665544333211 1247999999999999998753
No 50
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.66 E-value=1.1e-14 Score=119.07 Aligned_cols=143 Identities=17% Similarity=0.161 Sum_probs=111.2
Q ss_pred eecCCccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEEE-e-ccccCccccceEEcc-CCcEEEEEeCC--CeEEE
Q 030700 3 KLGEGIVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWED-W-HQVGSQSLLGLTTTK-ENNVIIVCDSQ--QGLLK 75 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~-~-~~~~~~p~~gl~~~~-~g~l~~v~~~~--~~i~~ 75 (173)
++....+..|+|||+|. .++||+++ ..++|.+.+.+|+..+ + ......|. +|++|| +|.+ |+++.+ ..|.+
T Consensus 73 ~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~-~iavdp~~G~l-Y~tD~g~~~~I~r 150 (628)
T 4a0p_A 73 HVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPR-ALALDPAEGFM-YWTEWGGKPKIDR 150 (628)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEE-EEEEETTTTEE-EEEECSSSCEEEE
T ss_pred EEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcc-cEEEccCCCeE-EEeCCCCCCEEEE
Confidence 34444478899999997 67999999 6788999998886332 2 24566899 999998 4555 999965 47888
Q ss_pred EccCC--cEEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecccc
Q 030700 76 VSEEG--VTVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLY 152 (173)
Q Consensus 76 ~~~~g--~~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 152 (173)
.+.+| .+.+.. .+..|++|++|++ ++|||+|.. .++|++++.++...+.+...+.
T Consensus 151 ~~~dG~~~~~l~~-----~~~~P~GlalD~~~~~LY~aD~~-----------------~~~I~~~d~dG~~~~v~~~~l~ 208 (628)
T 4a0p_A 151 AAMDGSERTTLVP-----NVGRANGLTIDYAKRRLYWTDLD-----------------TNLIESSNMLGLNREVIADDLP 208 (628)
T ss_dssp EETTSCSCEEEEC-----SCSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEEECCS
T ss_pred EeCCCCceEEEEC-----CCCCcceEEEccccCEEEEEECC-----------------CCEEEEEcCCCCceEEeeccCC
Confidence 88888 555543 2468999999995 679999854 3689999998766666777789
Q ss_pred CcceEEEccCCCEEEEEec
Q 030700 153 FANGVALSEDERFLVVCES 171 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~~~ 171 (173)
.|.||++.. ..|||+|.
T Consensus 209 ~P~glav~~--~~ly~tD~ 225 (628)
T 4a0p_A 209 HPFGLTQYQ--DYIYWTDW 225 (628)
T ss_dssp CEEEEEEET--TEEEEEET
T ss_pred CceEEEEEC--CEEEEecC
Confidence 999999965 47999985
No 51
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.66 E-value=5.2e-16 Score=128.35 Aligned_cols=142 Identities=13% Similarity=0.116 Sum_probs=104.2
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCC----c-EEEec-cccCccccceEEcc-CCcEEEEEeCC-CeEEEEcc
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNG----T-WEDWH-QVGSQSLLGLTTTK-ENNVIIVCDSQ-QGLLKVSE 78 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g----~-~~~~~-~~~~~p~~gl~~~~-~g~l~~v~~~~-~~i~~~~~ 78 (173)
+..|.+|++++ ++.||+++ ..++|++++.++ . ...+. .....|. ||++++ .+++ |+++.. +.|.+++.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~L-Y~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNI-YWTDSVLGTVSVADT 482 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBC-EECCTTTSCEEEEBS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcE-EEEeccCCeEEEEec
Confidence 67899999998 67899999 668899999775 2 22222 2345799 999995 5566 999876 46888888
Q ss_pred CC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe-eccccCc
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV-LDGLYFA 154 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~p 154 (173)
+| ...+.. ..+..|++|+++| .|.|||++.. ..++|+++++++...+.+ ...+..|
T Consensus 483 dg~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~P 542 (699)
T 1n7d_A 483 KGVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWP 542 (699)
T ss_dssp SSCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSC
T ss_pred CCCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCc
Confidence 77 343332 1246899999999 4689999743 125899999875444333 3458899
Q ss_pred ceEEEccCCCEEEEEecC
Q 030700 155 NGVALSEDERFLVVCESW 172 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~~ 172 (173)
+||+|+|+++.|||+|+.
T Consensus 543 nGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp CCEEECTTTCCEEEEETT
T ss_pred cEEEEeccCCEEEEEecC
Confidence 999999998899999974
No 52
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.63 E-value=2.7e-14 Score=106.22 Aligned_cols=146 Identities=13% Similarity=0.124 Sum_probs=106.6
Q ss_pred cCCcceEEEcCCCCEEEEcC-C---------------CeEEEEcCCCcEEEeccccCccccceEEc----cCCcEEEEEe
Q 030700 9 VNHPEDVSVDGNGVLYTATG-D---------------GWIKRMHPNGTWEDWHQVGSQSLLGLTTT----KENNVIIVCD 68 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~-~---------------~~i~~~~~~g~~~~~~~~~~~p~~gl~~~----~~g~l~~v~~ 68 (173)
...|.+++++++|++|+++. + +.|++++++++...+......|+ +++++ ++|+.+|+++
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~-~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPN-GIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEEEEESSEE-EEEEEECTTSCEEEEEEEE
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEeccCCCCcc-eEEEecccCCCCCEEEEEE
Confidence 35689999999999999883 2 68999998887766555556788 99999 9997669988
Q ss_pred CC-CeEEEEcc--CC-cEE--EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 69 SQ-QGLLKVSE--EG-VTV--LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 69 ~~-~~i~~~~~--~g-~~~--~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
.. +++.+++. +| ... ......+..+..|++++++++|++|+++.. .+.|+++|++++
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~-----------------~~~i~~~d~~~g 257 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG-----------------SSHIEVFGPDGG 257 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET-----------------TTEEEEECTTCB
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC-----------------CCEEEEEcCCCC
Confidence 65 56777773 45 221 111222211146899999999999999632 268999999855
Q ss_pred e-eEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 143 Q-TSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 143 ~-~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+ ...+......|.++++++|+++||+++..
T Consensus 258 ~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 258 QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp SCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred cEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 4 33343445778999999999999998753
No 53
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=1.3e-14 Score=115.16 Aligned_cols=145 Identities=12% Similarity=0.112 Sum_probs=105.2
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCC--------CcE------------EEe--ccccCccccceEEccCCcEE
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPN--------GTW------------EDW--HQVGSQSLLGLTTTKENNVI 64 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~--------g~~------------~~~--~~~~~~p~~gl~~~~~g~l~ 64 (173)
+.+|.+++++| ++.||+++ .+++|++++++ +.. ..+ .....+|. +|+++++|+.|
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~-~ia~~p~G~~l 324 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEF-QIFIHPTGKYA 324 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCE-EEEECTTSSEE
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCce-EEEEcCCCCEE
Confidence 57899999999 78999999 77889999965 433 121 12245789 99999999966
Q ss_pred EEEeCC-CeEEEEccCC-c------EEEEec--c----CC----ccccCCc-cEEEc-------CCCcEEEEeCcCCcCc
Q 030700 65 IVCDSQ-QGLLKVSEEG-V------TVLVSQ--F----NG----SQLRFAN-DVIEA-------SDGSLYFTVSSTKFTP 118 (173)
Q Consensus 65 ~v~~~~-~~i~~~~~~g-~------~~~~~~--~----~~----~~~~~~~-~l~~~-------~dG~~~v~~~~~~~~~ 118 (173)
|+++.. +.|++++.++ . ..++.. . +| ..++.|. +++++ ++|.|||+|..
T Consensus 325 YvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~----- 399 (496)
T 3kya_A 325 YFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL----- 399 (496)
T ss_dssp EEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG-----
T ss_pred EEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC-----
Confidence 999977 5788877554 2 334432 1 11 2467899 77887 67899999854
Q ss_pred ccceeeecccCCCceEEEEcCCCCeeEEeec------------------------cccCcceEEEccCCCEEEEEecC
Q 030700 119 AEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD------------------------GLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 119 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------------------------~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+.+|.+++++ |.+..++. .+..|.||+++++...|||+|+.
T Consensus 400 ------------N~rIr~i~~~-G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 400 ------------NFCVRKVTPE-GIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp ------------GTEEEEECTT-CBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred ------------CCEEEEEeCC-CCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 3588888875 55555532 15679999999985579999974
No 54
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.63 E-value=8.7e-14 Score=102.48 Aligned_cols=140 Identities=13% Similarity=0.156 Sum_probs=107.5
Q ss_pred ccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEecc--ccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-cE
Q 030700 8 IVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWHQ--VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-VT 82 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~~--~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-~~ 82 (173)
....|.+++++++|.+|+++ .++.|.+++++++...+.. ....|. +++++++|++ |+++.. .++.+++.+| ..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l-~v~~~~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDI-WFTENGANKIGKLSKKGGFT 95 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCE-EEEETTTTEEEEECTTSCEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCE-EEEecCCCeEEEECCCCCeE
Confidence 36789999999999999998 5789999998877655422 235789 9999999998 888864 5688888778 54
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee--ccccCcceEEEc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL--DGLYFANGVALS 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~p~gi~~~ 160 (173)
.+.... ....|.+++++++|++|+++.. .+.|++++++ ++..... .....|++|+++
T Consensus 96 ~~~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d 154 (300)
T 2qc5_A 96 EYPLPQ---PDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLG 154 (300)
T ss_dssp EEECSS---TTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEEC
T ss_pred EecCCC---CCCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEEC
Confidence 433211 1257899999999999999642 3689999998 6655432 236789999999
Q ss_pred cCCCEEEEEec
Q 030700 161 EDERFLVVCES 171 (173)
Q Consensus 161 ~dg~~lyv~~~ 171 (173)
++|+ ||+++.
T Consensus 155 ~~g~-l~v~~~ 164 (300)
T 2qc5_A 155 SDNA-LWFTEN 164 (300)
T ss_dssp TTSS-EEEEET
T ss_pred CCCC-EEEEec
Confidence 9998 899874
No 55
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.63 E-value=3.2e-14 Score=107.12 Aligned_cols=148 Identities=16% Similarity=0.175 Sum_probs=103.1
Q ss_pred ccCCcceEEEcC-CCCEEEEcCC------------------CeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEE
Q 030700 8 IVNHPEDVSVDG-NGVLYTATGD------------------GWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVC 67 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~~~------------------~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~ 67 (173)
.+..|.++++++ +|+||+++.. ++|++++++ ++...+......|+ ||+++++|+.+|++
T Consensus 124 ~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~-gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 124 PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPG-GAEVSADSSFVLVA 202 (322)
T ss_dssp ECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCC-EEEECTTSSEEEEE
T ss_pred cccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCc-ceEECCCCCEEEEE
Confidence 356799999999 9999998832 679999975 55555555567899 99999999866999
Q ss_pred eCC-CeEEEEccCC-----cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC
Q 030700 68 DSQ-QGLLKVSEEG-----VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST 141 (173)
Q Consensus 68 ~~~-~~i~~~~~~g-----~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 141 (173)
+.. ++|.+++.++ .+.+.. .. . |++|++|++|++|+++........ .....++|+++|+++
T Consensus 203 d~~~~~I~~~~~~~~~~~~~~~~~~-~~----g-P~gi~~d~~G~l~va~~~~~~~~~-------~~~~~~~v~~~d~~G 269 (322)
T 2fp8_A 203 EFLSHQIVKYWLEGPKKGTAEVLVK-IP----N-PGNIKRNADGHFWVSSSEELDGNM-------HGRVDPKGIKFDEFG 269 (322)
T ss_dssp EGGGTEEEEEESSSTTTTCEEEEEE-CS----S-EEEEEECTTSCEEEEEEEETTSST-------TSCEEEEEEEECTTS
T ss_pred eCCCCeEEEEECCCCcCCccceEEe-CC----C-CCCeEECCCCCEEEEecCcccccc-------cCCCccEEEEECCCC
Confidence 876 5788887543 334432 21 2 999999999999999743111000 001236899999984
Q ss_pred CeeEEeecc----ccCcceEEEccCCCEEEEEec
Q 030700 142 NQTSLVLDG----LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 142 ~~~~~~~~~----~~~p~gi~~~~dg~~lyv~~~ 171 (173)
..+..+... +..|.++++. + ..|||++.
T Consensus 270 ~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~ 301 (322)
T 2fp8_A 270 NILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTL 301 (322)
T ss_dssp CEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECS
T ss_pred CEEEEEECCCCCccccceEEEEe-C-CEEEEeec
Confidence 444444432 4677888873 4 47999865
No 56
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.62 E-value=1.1e-13 Score=102.03 Aligned_cols=139 Identities=13% Similarity=0.185 Sum_probs=106.6
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEec--cccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-cEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWH--QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-VTV 83 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~--~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-~~~ 83 (173)
...|.+++++++|.+|+++ .++.|++++++|+...+. .....|. +++++++|++ |+++.. .++++++.++ ...
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~d~~g~l-~v~~~~~~~i~~~~~~g~~~~ 180 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPA-FITLGSDNAL-WFTENQNNSIGRITNTGKLEE 180 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSSE-EEEETTTTEEEEECTTCCEEE
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCce-eEEECCCCCE-EEEecCCCeEEEECCCCcEEE
Confidence 3679999999999999988 478999999888766542 2345789 9999999997 998864 5788888877 544
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee--ccccCcceEEEcc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL--DGLYFANGVALSE 161 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~p~gi~~~~ 161 (173)
+... .....|.+++++++|++|+++.. .++|+++++. ++..... .....|.+|++++
T Consensus 181 ~~~~---~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 181 YPLP---TNAAAPVGITSGNDGALWFVEIM-----------------GNKIGRITTT-GEISEYDIPTPNARPHAITAGK 239 (300)
T ss_dssp EECS---STTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECTT-CCEEEEECSSTTCCEEEEEECS
T ss_pred eeCC---CCCCCcceEEECCCCCEEEEccC-----------------CCEEEEEcCC-CcEEEEECCCCCCCceEEEECC
Confidence 3211 22357899999999999999643 2589999994 5544442 2467789999999
Q ss_pred CCCEEEEEec
Q 030700 162 DERFLVVCES 171 (173)
Q Consensus 162 dg~~lyv~~~ 171 (173)
+|+ |||++.
T Consensus 240 ~g~-l~v~~~ 248 (300)
T 2qc5_A 240 NSE-IWFTEW 248 (300)
T ss_dssp TTC-EEEEET
T ss_pred CCC-EEEecc
Confidence 987 999874
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=1.4e-13 Score=101.38 Aligned_cols=139 Identities=12% Similarity=0.214 Sum_probs=106.0
Q ss_pred cCCcceEEEcCCCCEEEEcC-CCeEEEEcCCCcEEEec--cccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-cEE
Q 030700 9 VNHPEDVSVDGNGVLYTATG-DGWIKRMHPNGTWEDWH--QVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-VTV 83 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~-~~~i~~~~~~g~~~~~~--~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-~~~ 83 (173)
...|.+++++++|.+|+++. ++.|++++++++...+. .....|. +++++++|++ |++... .++++++.++ .+.
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l-~v~~~~~~~i~~~~~~g~~~~ 91 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEV-WFTENAANKIGRITKKGIIKE 91 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCE-EEEETTTTEEEEECTTSCEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCE-EEeCCCCCeEEEECCCCcEEE
Confidence 57899999999999999884 68899999887765543 2345789 9999999998 888764 5688888777 544
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--cccCcceEEEcc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GLYFANGVALSE 161 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~p~gi~~~~ 161 (173)
+... .....|.+|+++++|++|+++.. .+.|+++|+ +++...... ....|++|++++
T Consensus 92 ~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~ 150 (299)
T 2z2n_A 92 YTLP---NPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGS 150 (299)
T ss_dssp EECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred EeCC---CcCCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcC
Confidence 4321 12357899999999999998642 368999999 465554432 356789999999
Q ss_pred CCCEEEEEec
Q 030700 162 DERFLVVCES 171 (173)
Q Consensus 162 dg~~lyv~~~ 171 (173)
+|+ +|+++.
T Consensus 151 ~g~-l~v~~~ 159 (299)
T 2z2n_A 151 DNA-LWFTEN 159 (299)
T ss_dssp TSC-EEEEET
T ss_pred CCC-EEEEeC
Confidence 986 888764
No 58
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.62 E-value=9e-14 Score=102.36 Aligned_cols=139 Identities=12% Similarity=0.220 Sum_probs=106.3
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEEEecc--ccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-cEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWEDWHQ--VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG-VTV 83 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~~~~~--~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g-~~~ 83 (173)
...|.+++++++|.+|+++ .++.|++++++++...+.. ....|. +++++++|++ |+++.. .++.+++.++ ...
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l-~v~~~~~~~i~~~d~~g~~~~ 133 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDI-WFTEMNGNRIGRITDDGKIRE 133 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCE-EEEETTTTEEEEECTTCCEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCE-EEEecCCceEEEECCCCCEEE
Confidence 3679999999999999988 4788999998887655432 345789 9999999998 888754 5788888877 544
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee--ccccCcceEEEcc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL--DGLYFANGVALSE 161 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~p~gi~~~~ 161 (173)
+... .....|++++++++|++|+++.. .+.|+++|+ +++..... .....|.+|++++
T Consensus 134 ~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~ 192 (299)
T 2z2n_A 134 YELP---NKGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGN 192 (299)
T ss_dssp EECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECT
T ss_pred ecCC---CCCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECC
Confidence 4321 12357899999999999998632 368999999 57665542 2366789999999
Q ss_pred CCCEEEEEec
Q 030700 162 DERFLVVCES 171 (173)
Q Consensus 162 dg~~lyv~~~ 171 (173)
+|+ ||+++.
T Consensus 193 ~g~-l~v~~~ 201 (299)
T 2z2n_A 193 DDA-LWFVEI 201 (299)
T ss_dssp TSS-EEEEET
T ss_pred CCC-EEEEcc
Confidence 987 888874
No 59
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.60 E-value=9.4e-14 Score=102.18 Aligned_cols=141 Identities=11% Similarity=0.098 Sum_probs=102.0
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccCC---cEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG---VTV 83 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g---~~~ 83 (173)
-..+++++++ +++||++. .++.++.+|. +.+...-.+.+ .|. |..+.+||+.+|+++..+.+..+|+.. ...
T Consensus 65 ~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 65 SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSS-CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCC-eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 3567888887 45899888 6788999996 45544333333 455 666666766559999667788899644 344
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--cc----------
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GL---------- 151 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~---------- 151 (173)
+.....+.+...||++.+. +|.+|++... ++.|.++|++++++..... ++
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQ-----------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCC-----------------CCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 4333345566789999998 8899998632 3699999999998755543 22
Q ss_pred --cCcceEEEccCCCEEEEEe
Q 030700 152 --YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 --~~p~gi~~~~dg~~lyv~~ 170 (173)
..||||+++|+++++||+.
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEEC
Confidence 3679999999999999986
No 60
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.59 E-value=1.3e-13 Score=103.55 Aligned_cols=144 Identities=16% Similarity=0.179 Sum_probs=102.4
Q ss_pred CCcceEEEcCCCCEEEEcC-------CCeEEEEcCCC-cEEEeccccCccccceEEccCCcEEEEEeCC-CeEEEEcc--
Q 030700 10 NHPEDVSVDGNGVLYTATG-------DGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE-- 78 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~-------~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~-- 78 (173)
..|.+++++++|++|+++. .+.|+++++++ +...+......++ +++++++|+.+|+++.. +.+.+++.
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVAN-GIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEE-EEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCccc-ceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 4688999999999999874 36899999765 5555444455688 99999999865888754 56777774
Q ss_pred CC--cEEEEec-c-CCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecccc--
Q 030700 79 EG--VTVLVSQ-F-NGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLY-- 152 (173)
Q Consensus 79 ~g--~~~~~~~-~-~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 152 (173)
+| ...+... . .......|++++++++|++|+++.. +++|+++|+++..+..+.....
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~-----------------~~~v~~~d~~g~~~~~~~~~~~~~ 276 (333)
T 2dg1_A 214 DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG-----------------QGRVLVFNKRGYPIGQILIPGRDE 276 (333)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET-----------------TTEEEEECTTSCEEEEEECTTGGG
T ss_pred CCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcC-----------------CCEEEEECCCCCEEEEEEcCCCcc
Confidence 45 3322111 0 0011147899999999999998632 3689999997544444443322
Q ss_pred ----CcceEEEccCCCEEEEEec
Q 030700 153 ----FANGVALSEDERFLVVCES 171 (173)
Q Consensus 153 ----~p~gi~~~~dg~~lyv~~~ 171 (173)
.|.+++|+||++.||++..
T Consensus 277 g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 277 GHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp TCSCBCCEEEECTTSCEEEEEEE
T ss_pred ccccCcceEEECCCCCEEEEEeC
Confidence 6899999999999999764
No 61
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.58 E-value=2.2e-14 Score=118.69 Aligned_cols=141 Identities=17% Similarity=0.209 Sum_probs=103.3
Q ss_pred ccCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCCcEE-Eec-cccCccccceEEccCCcEEEEEeCC--CeEEEEccCC-
Q 030700 8 IVNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNGTWE-DWH-QVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKVSEEG- 80 (173)
Q Consensus 8 ~~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g~~~-~~~-~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~~~~g- 80 (173)
.+..|++|++++ +++||+++ ..++|++++++|+.. .+. .....|. +|++++.+..||+++.+ ..|.+++.+|
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~-giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPR-AIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCC-CEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcc-eEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 467899999996 77999998 678899999888643 332 3356899 99999864444999865 3677777777
Q ss_pred -cEEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec---cccCcc
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD---GLYFAN 155 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~p~ 155 (173)
.+.+.. ..+..|++|+++++ ++|||+|.. .++|+++++++...+.+.. .+..|.
T Consensus 530 ~~~~l~~----~~l~~PnGlavd~~~~~LY~aD~~-----------------~~~I~~~d~dG~~~~~~~~~~~~~~~P~ 588 (699)
T 1n7d_A 530 DIYSLVT----ENIQWPNGITLDLLSGRLYWVDSK-----------------LHSISSIDVNGGNRKTILEDEKRLAHPF 588 (699)
T ss_dssp CCCEESC----SSCSSCCCEEECTTTCCEEEEETT-----------------TTEEEEECSSSSCCEEECCCSSSCSSCC
T ss_pred CeeEEEe----CCCCCccEEEEeccCCEEEEEecC-----------------CCeEEEEccCCCceEEEEecCCcCCCce
Confidence 333322 23578999999986 679999854 3689999998655555553 368899
Q ss_pred eEEEccCCCEEEEEecC
Q 030700 156 GVALSEDERFLVVCESW 172 (173)
Q Consensus 156 gi~~~~dg~~lyv~~~~ 172 (173)
||++..+ .|||++..
T Consensus 589 glavd~~--~lywtd~~ 603 (699)
T 1n7d_A 589 SLAVFED--KVFWTDII 603 (699)
T ss_dssp CCEEETT--EEEEECST
T ss_pred EeEEECC--EEEEEeCC
Confidence 9999654 79999853
No 62
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.57 E-value=1.5e-13 Score=108.96 Aligned_cols=143 Identities=11% Similarity=0.174 Sum_probs=104.0
Q ss_pred CCccCCcceEEEcC--CCCEEEEc-CCCeEEEEcCCC-cEEEecccc----CccccceEE-------ccCCcEEEEEeCC
Q 030700 6 EGIVNHPEDVSVDG--NGVLYTAT-GDGWIKRMHPNG-TWEDWHQVG----SQSLLGLTT-------TKENNVIIVCDSQ 70 (173)
Q Consensus 6 ~~~~~~p~~l~~~~--~g~l~~~~-~~~~i~~~~~~g-~~~~~~~~~----~~p~~gl~~-------~~~g~l~~v~~~~ 70 (173)
...+..|.+|++|| +++||+++ ..++|+++|.++ .+..+.... ..|. +|++ +++|+.||+++..
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCC
Confidence 34467899999998 47899998 457899999655 555543332 3589 9999 9999855999876
Q ss_pred C-------eEEEEc--cCC-c------EEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCce
Q 030700 71 Q-------GLLKVS--EEG-V------TVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGV 133 (173)
Q Consensus 71 ~-------~i~~~~--~~g-~------~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 133 (173)
. .++.++ .+| + ..+. .+.+|++++++| +|.||+++.. .++
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~-----------------~g~ 270 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE-----------------KGQ 270 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-----------------TTE
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-----------------CCE
Confidence 4 266665 345 3 2332 235899999999 6789999754 368
Q ss_pred EEEEcCC-------CCee------------EEee--ccccCcceEEEccCCCEEEEEecC
Q 030700 134 LLKYDPS-------TNQT------------SLVL--DGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 134 v~~~d~~-------~~~~------------~~~~--~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
|+++|++ ++.. ..+. .....|.+|+|+|+|++|||+|+.
T Consensus 271 V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~ 330 (496)
T 3kya_A 271 VFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN 330 (496)
T ss_dssp EEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred EEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC
Confidence 9999987 5543 1222 224668999999999999999975
No 63
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.55 E-value=4e-13 Score=101.45 Aligned_cols=141 Identities=17% Similarity=0.178 Sum_probs=103.0
Q ss_pred CCcceEEEcCCCCEEEEcC-------CCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC-CeEEEEcc---
Q 030700 10 NHPEDVSVDGNGVLYTATG-------DGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE--- 78 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~-------~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~--- 78 (173)
..+.+++++++|++|+++. .+.|++++ +|+...+......++ +++++++|+.+|+++.. ..|++++.
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~-~i~~s~dg~~lyv~~~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVTKLFADISIPN-SICFSPDGTTGYFVDTKVNRLMRVPLDAR 211 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEEEEEEEESSEE-EEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEEEeeCCCcccC-CeEEcCCCCEEEEEECCCCEEEEEEcccc
Confidence 3578899999999998773 36899999 777666545456788 99999999877998865 46777773
Q ss_pred CC-c----EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccC
Q 030700 79 EG-V----TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYF 153 (173)
Q Consensus 79 ~g-~----~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~ 153 (173)
+| . +.+.. ... ....|+++++|++|++|+++.. .++|+++++++..+..+......
T Consensus 212 ~Gl~~~~~~~~~~-~~~-~~~~p~gi~~d~~G~lwva~~~-----------------~~~v~~~d~~g~~~~~i~~~~~~ 272 (326)
T 2ghs_A 212 TGLPTGKAEVFID-STG-IKGGMDGSVCDAEGHIWNARWG-----------------EGAVDRYDTDGNHIARYEVPGKQ 272 (326)
T ss_dssp TCCBSSCCEEEEE-CTT-SSSEEEEEEECTTSCEEEEEET-----------------TTEEEEECTTCCEEEEEECSCSB
T ss_pred cCCcccCceEEEE-CCC-CCCCCCeeEECCCCCEEEEEeC-----------------CCEEEEECCCCCEEEEEECCCCC
Confidence 34 1 22322 111 1246899999999999998532 26899999964444445444556
Q ss_pred cceEEEc-cCCCEEEEEec
Q 030700 154 ANGVALS-EDERFLVVCES 171 (173)
Q Consensus 154 p~gi~~~-~dg~~lyv~~~ 171 (173)
|.+++|+ +|++.|||+..
T Consensus 273 ~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 273 TTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEEESTTSCEEEEEEB
T ss_pred cEEEEEecCCCCEEEEEec
Confidence 8899998 89999999864
No 64
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.55 E-value=2.6e-13 Score=102.57 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=99.2
Q ss_pred CCcceEEEcCCCCEEEEcC--CCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC-----------CeEEE
Q 030700 10 NHPEDVSVDGNGVLYTATG--DGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-----------QGLLK 75 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~--~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-----------~~i~~ 75 (173)
..|+++++ .+++||+++. ++.|.++|+ ++++......+..|. +++++++|++ |++..+ ..+.+
T Consensus 131 ~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~-~i~~~~dG~l-~v~~~~~~~~~~~~~~~~~v~~ 207 (328)
T 3dsm_A 131 GSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPT-SLVMDKYNKM-WTITDGGYEGSPYGYEAPSLYR 207 (328)
T ss_dssp CBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBC-CCEECTTSEE-EEEBCCBCTTCSSCBCCCEEEE
T ss_pred CCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCcc-ceEEcCCCCE-EEEECCCccCCccccCCceEEE
Confidence 47999999 5789999983 788999996 456555455567899 9999999998 777654 36888
Q ss_pred Ecc-CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE--eec-
Q 030700 76 VSE-EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL--VLD- 149 (173)
Q Consensus 76 ~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~- 149 (173)
++. ++ +........+ ..|++|+++|||+ +|+++ ..|+++|++++++.. +..
T Consensus 208 id~~t~~v~~~~~~~~g---~~p~~la~~~d~~~lyv~~--------------------~~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 208 IDAETFTVEKQFKFKLG---DWPSEVQLNGTRDTLYWIN--------------------NDIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp EETTTTEEEEEEECCTT---CCCEEEEECTTSCEEEEES--------------------SSEEEEETTCSSCCSSCSBCC
T ss_pred EECCCCeEEEEEecCCC---CCceeEEEecCCCEEEEEc--------------------cEEEEEECCCCceeeeeeecC
Confidence 886 45 3322222112 4799999999875 78874 278999998776521 112
Q ss_pred cccCcceEEEccCCCEEEEEe
Q 030700 150 GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~ 170 (173)
+...|.+|+++|+++.|||++
T Consensus 265 ~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 265 RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CSSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEEEcCCCCeEEEEc
Confidence 146799999999777899998
No 65
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.54 E-value=1.2e-12 Score=95.68 Aligned_cols=139 Identities=20% Similarity=0.214 Sum_probs=100.0
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g--~~~~ 84 (173)
...+|++.+ +++||+.+ .++.++.+|+ +.+...-.+..+.+. |++. +++.||+++..+.+..+|+. . ...+
T Consensus 87 ~FgeGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~--dg~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 87 YFGEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTH--NDQYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp CCEEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEE--CSSCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred cceeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEec--CCCEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 345778886 55999888 6788999996 456544333344556 6664 44444999876779999974 4 4444
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-------------c
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-------------L 151 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------------~ 151 (173)
.....+.++..+|.+.+. +|++|+.... ++.|.++||++|++.....- .
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred EeccCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcC
Confidence 333456777888999987 8999988642 35899999999987665432 1
Q ss_pred cCcceEEEccCCCEEEEEe
Q 030700 152 YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~~ 170 (173)
..|||||++|+++.|||+-
T Consensus 225 ~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEEcCCCCEEEEEC
Confidence 3679999999999999984
No 66
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.53 E-value=3.9e-13 Score=100.63 Aligned_cols=136 Identities=18% Similarity=0.218 Sum_probs=98.2
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCCCc-EEEe-----------ccccCccccceEEccCCcEEEEEeCC-CeEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGT-WEDW-----------HQVGSQSLLGLTTTKENNVIIVCDSQ-QGLL 74 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~-~~~~-----------~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~ 74 (173)
...+.+++..+++.+|+++ ..+.|+++++++. ...+ ......|+ || +++++.||+++.. +.|.
T Consensus 116 ~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn-gi--s~dg~~lyv~d~~~~~I~ 192 (306)
T 2p4o_A 116 AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN-GL--KRFGNFLYVSNTEKMLLL 192 (306)
T ss_dssp CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE-EE--EEETTEEEEEETTTTEEE
T ss_pred ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC-Cc--CcCCCEEEEEeCCCCEEE
Confidence 3567888887788899988 5889999997642 1111 11234688 98 7777766999977 4677
Q ss_pred EEccC--C-c---EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 75 KVSEE--G-V---TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 75 ~~~~~--g-~---~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
+++.+ | . +.+.. +..|++|+++++|++|+++.. .++|.+++++ ++...+.
T Consensus 193 ~~~~~~~g~~~~~~~~~~------~~~P~gi~vd~dG~l~va~~~-----------------~~~V~~~~~~-G~~~~~~ 248 (306)
T 2p4o_A 193 RIPVDSTDKPGEPEIFVE------QTNIDDFAFDVEGNLYGATHI-----------------YNSVVRIAPD-RSTTIIA 248 (306)
T ss_dssp EEEBCTTSCBCCCEEEEE------SCCCSSEEEBTTCCEEEECBT-----------------TCCEEEECTT-CCEEEEE
T ss_pred EEEeCCCCCCCccEEEec------cCCCCCeEECCCCCEEEEeCC-----------------CCeEEEECCC-CCEEEEe
Confidence 77743 4 2 22222 257999999999999999642 3689999997 5544332
Q ss_pred ---ccccCcceEEEc---cCCCEEEEEec
Q 030700 149 ---DGLYFANGVALS---EDERFLVVCES 171 (173)
Q Consensus 149 ---~~~~~p~gi~~~---~dg~~lyv~~~ 171 (173)
.++..|.+++|+ ||+++|||++.
T Consensus 249 ~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 249 QAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred ecccccCCceEEEEecccCCCCEEEEECC
Confidence 235789999998 89999999975
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=1e-12 Score=99.20 Aligned_cols=145 Identities=12% Similarity=0.146 Sum_probs=97.9
Q ss_pred cCCcceEEEcCCCCEEEEcC---CCeEEEEcC-CCcEEEe---ccccCccccceEEccCCcEEEEEeCCC-eEEEEc--c
Q 030700 9 VNHPEDVSVDGNGVLYTATG---DGWIKRMHP-NGTWEDW---HQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVS--E 78 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~---~~~i~~~~~-~g~~~~~---~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~--~ 78 (173)
...|.+++++|+|+||+++. ++.|+.|+. +|+...+ ......|. +++++++|++||++.... .+..++ .
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 46799999999999998773 578888885 4444333 23466899 999999999878888553 344444 4
Q ss_pred CC-cEEEEecc-CCc------cccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCC-CCeeEEee-
Q 030700 79 EG-VTVLVSQF-NGS------QLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS-TNQTSLVL- 148 (173)
Q Consensus 79 ~g-~~~~~~~~-~~~------~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~~~~~~- 148 (173)
+| ...+.... .+. ....++.++++|||++|+++.. ++.|+.|+.+ ++++....
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeee
Confidence 55 44333221 111 1235778999999998888643 2467766665 45544332
Q ss_pred ---ccccCcceEEEccCCCEEEEEec
Q 030700 149 ---DGLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 149 ---~~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
.....|++++|+|||++||+++.
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeC
Confidence 12346889999999999999764
No 68
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.52 E-value=1.5e-12 Score=95.26 Aligned_cols=139 Identities=19% Similarity=0.240 Sum_probs=100.3
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g--~~~~ 84 (173)
...+|++++ +++||+.+ .++.++.+|+ +.+...-.+..+.+. |++. +++.||+++..+.+..+|+. . ...+
T Consensus 96 ~FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~--Dg~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 96 IFAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCY--WNGKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp CCEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEE--ETTEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred cceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEec--CCCEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 345788886 45999888 6788999996 455544333344556 7765 44555999976789999964 4 4444
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc--------------
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-------------- 150 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------------- 150 (173)
.....+.++..+|.|.+. +|++|+.... ++.|.++||++|++.....-
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCT
T ss_pred EeCCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCc
Confidence 433456677788999988 8899988642 35999999999987655431
Q ss_pred ccCcceEEEccCCCEEEEEe
Q 030700 151 LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~ 170 (173)
...+||||++|+++.||||-
T Consensus 234 ~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEeC
Confidence 13779999999999999984
No 69
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.52 E-value=1.6e-13 Score=108.42 Aligned_cols=168 Identities=16% Similarity=0.239 Sum_probs=110.4
Q ss_pred CceecCCccCCcceEEEcCCCC--EEEEcCCCeEEEEcCCCcE-----EEe----ccc-----cCccccceEEccC----
Q 030700 1 MIKLGEGIVNHPEDVSVDGNGV--LYTATGDGWIKRMHPNGTW-----EDW----HQV-----GSQSLLGLTTTKE---- 60 (173)
Q Consensus 1 ~~~~~~~~~~~p~~l~~~~~g~--l~~~~~~~~i~~~~~~g~~-----~~~----~~~-----~~~p~~gl~~~~~---- 60 (173)
+++++.+ |..|.+|++.|+|. |||+...|+|++++.+|.. ..+ ... ...+. ||+++|+
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCC
Confidence 4677777 89999999999884 9999988999999876642 111 111 23466 8999985
Q ss_pred CcEEEEEeCC-------------CeEEEEcc-C--------C-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcC
Q 030700 61 NNVIIVCDSQ-------------QGLLKVSE-E--------G-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFT 117 (173)
Q Consensus 61 g~l~~v~~~~-------------~~i~~~~~-~--------g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~ 117 (173)
+.+ |++... ..|.++.. + . .+.+.+.......+....|+++|||.|||+.......
T Consensus 84 ~~l-Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 84 GKL-YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMIT 162 (463)
T ss_dssp CEE-EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCC
T ss_pred CEE-EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCC
Confidence 666 887431 24555542 1 1 2344443222234567889999999999996553211
Q ss_pred cccceeeecccCCCceEEEEcCCCC--------------------eeEEeeccccCcceEEEccC-----CC-EEEEEec
Q 030700 118 PAEYYLDLVSGEPHGVLLKYDPSTN--------------------QTSLVLDGLYFANGVALSED-----ER-FLVVCES 171 (173)
Q Consensus 118 ~~~~~~~~~~~~~~~~v~~~d~~~~--------------------~~~~~~~~~~~p~gi~~~~d-----g~-~lyv~~~ 171 (173)
..+.....-.....|+|+|+++++. ..+.++.++++|.||+|+|+ |+ ++|++|.
T Consensus 163 ~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 163 LDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp HHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC
T ss_pred CCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEeccc
Confidence 1100000001234689999999963 35688899999999999997 33 6888875
No 70
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=3.6e-12 Score=95.82 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=101.9
Q ss_pred CcceEEEcCCC-CEEEEc--CCCeEEEEcCC-CcEEEecc-ccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEE
Q 030700 11 HPEDVSVDGNG-VLYTAT--GDGWIKRMHPN-GTWEDWHQ-VGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTV 83 (173)
Q Consensus 11 ~p~~l~~~~~g-~l~~~~--~~~~i~~~~~~-g~~~~~~~-~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~ 83 (173)
.|.+++++|+| .+|+++ .++.|+.+|.. ++...... ....|. +++++++|+.+|+++....+..++. ++ ...
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMST-GLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCC-CCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccc-eEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 37899999987 488877 46789999964 55444333 445688 9999999998798887677888885 55 332
Q ss_pred EEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~d 162 (173)
........+...+.+++++|+|+ +|+++. ..+.|+.+|+.+++...... ...+.+++|+||
T Consensus 221 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~s~d 282 (353)
T 3vgz_A 221 RKKLLDDGKEHFFINISLDTARQRAFITDS-----------------KAAEVLVVDTRNGNILAKVA-APESLAVLFNPA 282 (353)
T ss_dssp EEECCCSSSCCCEEEEEEETTTTEEEEEES-----------------SSSEEEEEETTTCCEEEEEE-CSSCCCEEEETT
T ss_pred EEEcCCCCCCcccceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEE-cCCCceEEECCC
Confidence 22221111234678899999997 788753 23689999998877544443 345688999999
Q ss_pred CCEEEEEec
Q 030700 163 ERFLVVCES 171 (173)
Q Consensus 163 g~~lyv~~~ 171 (173)
|+++|+++.
T Consensus 283 g~~l~v~~~ 291 (353)
T 3vgz_A 283 RNEAYVTHR 291 (353)
T ss_dssp TTEEEEEET
T ss_pred CCEEEEEEC
Confidence 999999874
No 71
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.49 E-value=2.3e-12 Score=97.90 Aligned_cols=142 Identities=14% Similarity=0.174 Sum_probs=98.1
Q ss_pred CCcceEEEcC-CCCEEEEcC----CCeEEEEcC-CCcEEEeccc------------------------------cCcccc
Q 030700 10 NHPEDVSVDG-NGVLYTATG----DGWIKRMHP-NGTWEDWHQV------------------------------GSQSLL 53 (173)
Q Consensus 10 ~~p~~l~~~~-~g~l~~~~~----~~~i~~~~~-~g~~~~~~~~------------------------------~~~p~~ 53 (173)
..|.++++++ +|.+|+++. .+.|++++. +|+..++... ...++
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~- 198 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN- 198 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE-
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc-
Confidence 4679999997 579999884 567888885 3554443211 02367
Q ss_pred ceEEccCCcEEEEEeCCC-eEEEEcc----CC-cE--EEEecc--CCccccCCccEEEcCCCcEEEEeCcCCcCccccee
Q 030700 54 GLTTTKENNVIIVCDSQQ-GLLKVSE----EG-VT--VLVSQF--NGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYL 123 (173)
Q Consensus 54 gl~~~~~g~l~~v~~~~~-~i~~~~~----~g-~~--~~~~~~--~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~ 123 (173)
||+++++|+.||+++... .+++++. ++ .. .+...+ .+ ....|++|++|++|++|+++..
T Consensus 199 gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g-~~g~pdgia~d~~G~l~va~~~---------- 267 (343)
T 2qe8_A 199 GIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS-EKPICDGISIDKDHNIYVGDLA---------- 267 (343)
T ss_dssp EEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE-ECCSCSCEEECTTCCEEEEEGG----------
T ss_pred eeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc-cCCCCceEEECCCCCEEEEccC----------
Confidence 999999998779988654 6887762 22 10 000000 00 0137899999999999999743
Q ss_pred eecccCCCceEEEEcCCCCeeEEeecc--ccCcceEEEccCCCEEEEEec
Q 030700 124 DLVSGEPHGVLLKYDPSTNQTSLVLDG--LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 124 ~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~p~gi~~~~dg~~lyv~~~ 171 (173)
.++|.++|+++++...+... +..|.+|+|+++++ |||++.
T Consensus 268 -------~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 268 -------HSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp -------GTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred -------CCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 36999999954776655543 67899999999976 888764
No 72
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.48 E-value=6.9e-12 Score=90.85 Aligned_cols=139 Identities=16% Similarity=0.121 Sum_probs=99.7
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g--~~~~ 84 (173)
...+|++++ +++||+.+ ..+.++.+|+ +.+...-....+.+. |++. +++.||+++....+..+|+. . ...+
T Consensus 65 ~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~--dg~~L~vSdgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 65 YFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTS--DDSHLYMSDGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp CCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEE--CSSCEEEECSSSEEEEECTTTCCEEEEE
T ss_pred cceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEee--CCCEEEEECCCCeEEEEeCCCCeEEEEE
Confidence 345788876 57899887 6788999996 455544333344556 6664 44444999977789999964 3 4444
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--c------------
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--G------------ 150 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~------------ 150 (173)
.....+.++..+|.|... +|++|+.... +..|.++||++|++..... +
T Consensus 141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~ 202 (243)
T 3mbr_X 141 KVTAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDST 202 (243)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTT
T ss_pred EEccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCCc
Confidence 444456677788999877 8899987642 2589999999998765543 1
Q ss_pred ccCcceEEEccCCCEEEEEe
Q 030700 151 LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~ 170 (173)
...+||||++|+++.||||-
T Consensus 203 ~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 203 NDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp SSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEcCCCCEEEEEC
Confidence 24679999999999999984
No 73
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.48 E-value=6.5e-12 Score=94.41 Aligned_cols=139 Identities=19% Similarity=0.234 Sum_probs=101.9
Q ss_pred CCcceEEEcCCC-CEEEEcCCCeEEEEcC-CCcEEEecc-----ccCccccceEEccCCcEEEEEeCC-CeEEEEcc-CC
Q 030700 10 NHPEDVSVDGNG-VLYTATGDGWIKRMHP-NGTWEDWHQ-----VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~~~~~i~~~~~-~g~~~~~~~-----~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~-~g 80 (173)
..|.+++++|+| .||+++.++.|+.+|. +++...... ....+. +++++++|+.+|+++.. ..+..++. ++
T Consensus 185 ~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 185 KMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFI-NISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEE-EEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccc-eEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 358999999987 5888888889999995 454433222 123467 89999999977888866 56777775 45
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVA 158 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~ 158 (173)
....... ..+.+++++|+|+ +|+++. .++.|..+|..+++..........|.+++
T Consensus 264 ~~~~~~~~------~~~~~~~~s~dg~~l~v~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 320 (353)
T 3vgz_A 264 NILAKVAA------PESLAVLFNPARNEAYVTHR-----------------QAGKVSVIDAKSYKVVKTFDTPTHPNSLA 320 (353)
T ss_dssp CEEEEEEC------SSCCCEEEETTTTEEEEEET-----------------TTTEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred cEEEEEEc------CCCceEEECCCCCEEEEEEC-----------------CCCeEEEEECCCCeEEEEEecCCCCCeEE
Confidence 3222221 2357899999997 888853 23689999998887665555556789999
Q ss_pred EccCCCEEEEEecC
Q 030700 159 LSEDERFLVVCESW 172 (173)
Q Consensus 159 ~~~dg~~lyv~~~~ 172 (173)
|+|||++||++...
T Consensus 321 ~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 321 LSADGKTLYVSVKQ 334 (353)
T ss_dssp ECTTSCEEEEEEEC
T ss_pred EcCCCCEEEEEEcc
Confidence 99999999998653
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=1.5e-11 Score=93.36 Aligned_cols=146 Identities=15% Similarity=0.197 Sum_probs=93.8
Q ss_pred CcceEEEcCCCC-EEEEc-CCCeEEEEc--CCC-----c-E-------EEeccccCccccceEEccCCcEEEEEeCC-Ce
Q 030700 11 HPEDVSVDGNGV-LYTAT-GDGWIKRMH--PNG-----T-W-------EDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QG 72 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~~~~i~~~~--~~g-----~-~-------~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~ 72 (173)
.|.+++++|+|+ ||+++ .++.|..|+ ..+ + + .........|. +++|+++|+++|+++.. ..
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~v~~~~~~~ 234 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPR-HLIFNSDGKFAYLINEIGGT 234 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEE-EEEECTTSSEEEEEETTTCE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCe-EEEEcCCCCEEEEEcCCCCe
Confidence 457899999996 88887 567777665 333 2 2 11223355788 99999999977888854 45
Q ss_pred EEEEcc-CC-cEEEEeccC-CccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 73 LLKVSE-EG-VTVLVSQFN-GSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 73 i~~~~~-~g-~~~~~~~~~-~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
+..++. +| .+.+..... ......|.+++++|||+ +|+++... ...-.+|.+++.+++.+.+.
T Consensus 235 v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~--------------~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 235 VIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK--------------ADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS--------------SCEEEEEEECTTTCCEEEEE
T ss_pred EEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC--------------CCEEEEEEEcCCCCcEEEee
Confidence 555553 56 443332211 11234578999999997 67775320 01124556665566654443
Q ss_pred c--cccCcceEEEccCCCEEEEEec
Q 030700 149 D--GLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 149 ~--~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
. ....|.+++|+|||++||++..
T Consensus 301 ~~~~g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 301 YQLTGIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEECSSCCCEEEECTTSCEEEEEET
T ss_pred EecCCCCCceEEECCCCCEEEEEEC
Confidence 2 1357899999999999999863
No 75
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.45 E-value=6.5e-12 Score=93.89 Aligned_cols=142 Identities=10% Similarity=0.093 Sum_probs=97.7
Q ss_pred CCcce-EEEcCCCC-EEEEcCC-C--eEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC-Ce-EEEEc--cC
Q 030700 10 NHPED-VSVDGNGV-LYTATGD-G--WIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QG-LLKVS--EE 79 (173)
Q Consensus 10 ~~p~~-l~~~~~g~-l~~~~~~-~--~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~-i~~~~--~~ 79 (173)
..|.. ++++|+|. ||++... + .|+.++. +++..........|. +++++++|+.+|+++.. .. +..++ .+
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAV-GIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEE-EEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCcc-ceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 45777 99999986 5643343 3 8999996 455554445566788 99999999865888755 44 44444 45
Q ss_pred C-cEEE-EeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee---EEeeccccC
Q 030700 80 G-VTVL-VSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT---SLVLDGLYF 153 (173)
Q Consensus 80 g-~~~~-~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~~~~~~~~~ 153 (173)
| .... ..... ....|..++++|||+ +|+++. .++.|..+|.++++. .........
T Consensus 162 g~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~-----------------~~~~v~v~d~~~~~~~~~~~~~~~~~~ 222 (331)
T 3u4y_A 162 GVLFDTGQEFIS--GGTRPFNITFTPDGNFAFVANL-----------------IGNSIGILETQNPENITLLNAVGTNNL 222 (331)
T ss_dssp CCEEEEEEEEEC--SSSSEEEEEECTTSSEEEEEET-----------------TTTEEEEEECSSTTSCEEEEEEECSSC
T ss_pred CcEeecCCcccc--CCCCccceEECCCCCEEEEEeC-----------------CCCeEEEEECCCCcccceeeeccCCCC
Confidence 5 3221 11111 124689999999997 888853 236899999887765 333444577
Q ss_pred cceEEEccCCCEEEEEec
Q 030700 154 ANGVALSEDERFLVVCES 171 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~~~ 171 (173)
|.+++|+|||++||++..
T Consensus 223 ~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 223 PGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp CCCEEECTTSSEEEEECS
T ss_pred CceEEECCCCCEEEEEEc
Confidence 899999999999999864
No 76
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=99.43 E-value=8.6e-13 Score=105.40 Aligned_cols=153 Identities=16% Similarity=0.209 Sum_probs=91.8
Q ss_pred ecCCccCCcceEEEcC-CCCEEEEcCCCeEE-E----E--------cCCCcEEEeccccCccccceEEccCCcEEEEEeC
Q 030700 4 LGEGIVNHPEDVSVDG-NGVLYTATGDGWIK-R----M--------HPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~-~g~l~~~~~~~~i~-~----~--------~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~ 69 (173)
++...|.+||+++++| +|.+|++-.++.-. . . +..|++.++.+..+.+. +..|..+ ++++|..
T Consensus 378 vGAT~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~-a~~f~W~--i~l~~G~ 454 (592)
T 4a9v_A 378 VGATRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHA-SKTFAWD--LFVVAGN 454 (592)
T ss_dssp TTCCCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTT-CSEEEEE--EEEECCC
T ss_pred cCCccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcc-cceeeEE--EEEEccC
Confidence 3455689999999999 78999876321100 0 0 11244444443333333 3444322 3122211
Q ss_pred CCeEEEEccC-C-cEEEEeccCCccccCCccEEEcCCCcEEE-EeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 70 QQGLLKVSEE-G-VTVLVSQFNGSQLRFANDVIEASDGSLYF-TVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 70 ~~~i~~~~~~-g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
.. ..+ + ..-......++++++||+|+++++|+||| +|... +.. ...+....+.||++++++++++.
T Consensus 455 p~-----~~~~~~~~g~~~~~~~~~fnsPDnL~fd~~G~LWf~TD~~~--~~~----g~~~~~gnn~v~~~dp~tGel~~ 523 (592)
T 4a9v_A 455 PS-----VHAGTPKGGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDS--SNA----GDFAGMGNNQMLCADPATGEIRR 523 (592)
T ss_dssp TT-----TSTTSGGGCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCC--CCS----GGGTTCCSCEEEEECTTTCCEEE
T ss_pred Cc-----ccccccccCccCccccCccCCCCceEECCCCCEEEEeCCCc--Ccc----ccccccCCceEEEEeCCCCeEEE
Confidence 10 000 0 00011122345789999999999999999 77542 211 11122345699999999899988
Q ss_pred eecc--ccCcceEEEccCCCEEEEEe
Q 030700 147 VLDG--LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 147 ~~~~--~~~p~gi~~~~dg~~lyv~~ 170 (173)
++.. ...|+|++||||+++|||+-
T Consensus 524 fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 524 FMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEeCCCCccccCCEECCCCCEEEEEE
Confidence 8864 46789999999999999975
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.41 E-value=6e-11 Score=88.61 Aligned_cols=141 Identities=18% Similarity=0.302 Sum_probs=95.2
Q ss_pred CCcceEEEcCCC-CEEEEc-CCCe-EEEEc--CCCcEE----EeccccCccccceEEccCCcEEEEEeCC-CeEEEEcc-
Q 030700 10 NHPEDVSVDGNG-VLYTAT-GDGW-IKRMH--PNGTWE----DWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE- 78 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~-~~~~-i~~~~--~~g~~~----~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~- 78 (173)
..|.+++++|+| .||+++ .++. |..|+ .+|.+. ........|. +++++++|+.+|++... ..+..++.
T Consensus 128 ~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 128 YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF-NITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE-EEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc-ceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 468999999998 488887 4466 66554 455442 2223455688 99999999966888765 45666664
Q ss_pred CC-c-EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec---c--
Q 030700 79 EG-V-TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD---G-- 150 (173)
Q Consensus 79 ~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~-- 150 (173)
++ . ..+.....+ ..|.+++++|||+ +|+++. .++.|+.+|+++++++.+.. .
T Consensus 207 ~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~-----------------~~~~i~~~d~~~~~~~~~~~~~~~~~ 266 (331)
T 3u4y_A 207 NPENITLLNAVGTN---NLPGTIVVSRDGSTVYVLTE-----------------STVDVFNFNQLSGTLSFVKSFGHGLL 266 (331)
T ss_dssp STTSCEEEEEEECS---SCCCCEEECTTSSEEEEECS-----------------SEEEEEEEETTTTEEEEEEEEECCCC
T ss_pred CCcccceeeeccCC---CCCceEEECCCCCEEEEEEc-----------------CCCEEEEEECCCCceeeecccccccc
Confidence 45 4 222222222 5789999999998 777743 23679999998887633321 1
Q ss_pred -----ccCcceEEEccCCCEEEEEec
Q 030700 151 -----LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 151 -----~~~p~gi~~~~dg~~lyv~~~ 171 (173)
...+++++|+|||++||++..
T Consensus 267 ~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 267 IDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp CCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred cCCCCcccccceEECCCCCEEEEecC
Confidence 122356899999999999864
No 78
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.40 E-value=4.7e-11 Score=90.04 Aligned_cols=145 Identities=21% Similarity=0.180 Sum_probs=92.0
Q ss_pred cCCcceEEEcCCCC-EEEEc-CCCeEEEEc--CCCcEEEecc---c---------cCccccceEEccCCcEEEEEeCCC-
Q 030700 9 VNHPEDVSVDGNGV-LYTAT-GDGWIKRMH--PNGTWEDWHQ---V---------GSQSLLGLTTTKENNVIIVCDSQQ- 71 (173)
Q Consensus 9 ~~~p~~l~~~~~g~-l~~~~-~~~~i~~~~--~~g~~~~~~~---~---------~~~p~~gl~~~~~g~l~~v~~~~~- 71 (173)
...|.+++++|+|+ ||++. .++.|..|+ .+|....+.. . ...+. +++++++|++ |+++...
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l-~v~~~~~~ 162 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRL-AVIDLGSD 162 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCE-EEEETTTT
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcE-EEEeCCCC
Confidence 36799999999986 88877 567777776 4555433211 1 12467 8999999995 9988764
Q ss_pred eEEEEc--cCC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe
Q 030700 72 GLLKVS--EEG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV 147 (173)
Q Consensus 72 ~i~~~~--~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 147 (173)
.+..++ .+| ....... .......|+.++++|||+ +|+++... ..-.++.++..+++...+
T Consensus 163 ~v~~~~~~~~g~~~~~~~~-~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 163 KVYVYNVSDAGQLSEQSVL-TMEAGFGPRHLVFSPDGQYAFLAGELS---------------SQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEEEEECTTSCEEEEEEE-ECCTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEEETTTTEEEEE
T ss_pred EEEEEEECCCCcEEEeeeE-EcCCCCCCceEEECCCCCEEEEEeCCC---------------CEEEEEEecCCCCceEEe
Confidence 455555 256 4433221 111124688999999998 78875331 112445555545665433
Q ss_pred ecc---------ccCcceEEEccCCCEEEEEec
Q 030700 148 LDG---------LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 148 ~~~---------~~~p~gi~~~~dg~~lyv~~~ 171 (173)
... ...|.+++|+|||++||+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 221 134778999999999999865
No 79
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.39 E-value=7.6e-12 Score=95.68 Aligned_cols=144 Identities=19% Similarity=0.200 Sum_probs=93.7
Q ss_pred ccCCcceEEEcCCCCEEEEcC--------------CCeEEEEcCCCcE--------------EEeccccCccccceEEcc
Q 030700 8 IVNHPEDVSVDGNGVLYTATG--------------DGWIKRMHPNGTW--------------EDWHQVGSQSLLGLTTTK 59 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~~~~--------------~~~i~~~~~~g~~--------------~~~~~~~~~p~~gl~~~~ 59 (173)
....|.+|+++|+|.||++.. .++|+|++++|++ +.+......|. |+++++
T Consensus 133 ~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~-g~a~d~ 211 (352)
T 2ism_A 133 GLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQ-GLAWHP 211 (352)
T ss_dssp CCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEEC-CCEECT
T ss_pred CCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcc-cEEEEC
Confidence 346789999999999999862 2689999988832 23333345699 999999
Q ss_pred -CCcEEEEEeCCCe---------EEEEccCC-cE---EEE--------e-ccCCccccCCccEEEcCCCcEEEEeCcCCc
Q 030700 60 -ENNVIIVCDSQQG---------LLKVSEEG-VT---VLV--------S-QFNGSQLRFANDVIEASDGSLYFTVSSTKF 116 (173)
Q Consensus 60 -~g~l~~v~~~~~~---------i~~~~~~g-~~---~~~--------~-~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~ 116 (173)
+|++ |+++.+.. +..+.+.+ .. ... . ...-.+...|.++++ .+|.+|+++..
T Consensus 212 ~~g~l-~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~--- 286 (352)
T 2ism_A 212 KTGEL-FSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLR--- 286 (352)
T ss_dssp TTCCE-EEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETT---
T ss_pred CCCCE-EEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECC---
Confidence 7888 99986643 33333211 00 000 0 000011246889999 57899999743
Q ss_pred CcccceeeecccCCCceEEEEcCCCCe-------eEEeeccccCcceEEEccCCCEEEEEecC
Q 030700 117 TPAEYYLDLVSGEPHGVLLKYDPSTNQ-------TSLVLDGLYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 117 ~~~~~~~~~~~~~~~~~v~~~d~~~~~-------~~~~~~~~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.++|+++++++.. ...+......|.+|+++|||. |||++..
T Consensus 287 --------------~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~-lyv~~~~ 334 (352)
T 2ism_A 287 --------------GQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGA-LYVTTSN 334 (352)
T ss_dssp --------------TTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSC-EEEEECS
T ss_pred --------------CCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCc-EEEEEeC
Confidence 2578888765321 233334467899999999995 8888753
No 80
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.30 E-value=3.4e-10 Score=83.24 Aligned_cols=140 Identities=15% Similarity=0.122 Sum_probs=90.3
Q ss_pred ecCCccCCcceEEEcCCCCEEEEcC---CCeEEEEcC-CCcEEEeccccC--ccccceEEccCCcEEEEEeCCC-eEEEE
Q 030700 4 LGEGIVNHPEDVSVDGNGVLYTATG---DGWIKRMHP-NGTWEDWHQVGS--QSLLGLTTTKENNVIIVCDSQQ-GLLKV 76 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~g~l~~~~~---~~~i~~~~~-~g~~~~~~~~~~--~p~~gl~~~~~g~l~~v~~~~~-~i~~~ 76 (173)
+.-+.-.+|.||+++++|.||++.. .+.|.++|. +|++....+... .+. |++++ ++.||++.... .+..+
T Consensus 15 ~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~--g~~lyv~t~~~~~v~vi 91 (266)
T 2iwa_A 15 FPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGE-GLTLL--NEKLYQVVWLKNIGFIY 91 (266)
T ss_dssp EECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEE-EEEEE--TTEEEEEETTCSEEEEE
T ss_pred EECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceE-EEEEe--CCEEEEEEecCCEEEEE
Confidence 3334335689999999899999863 578999995 677665433333 455 66765 33449988764 57777
Q ss_pred ccCCcEEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec------
Q 030700 77 SEEGVTVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD------ 149 (173)
Q Consensus 77 ~~~g~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------ 149 (173)
|.+-.+.+.....+ .+.+..+.+|| ++|+++. +++|+.+|+++.+......
T Consensus 92 D~~t~~v~~~i~~g----~~~g~glt~Dg~~l~vs~g------------------s~~l~viD~~t~~v~~~I~Vg~~~~ 149 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQ----MKDGWGLATDGKILYGSDG------------------TSILYEIDPHTFKLIKKHNVKYNGH 149 (266)
T ss_dssp ETTTTEEEEEEECC----SSSCCEEEECSSSEEEECS------------------SSEEEEECTTTCCEEEEEECEETTE
T ss_pred ECCCCcEEEEEECC----CCCeEEEEECCCEEEEECC------------------CCeEEEEECCCCcEEEEEEECCCCc
Confidence 75332222222111 24556677776 5999863 2699999999865433322
Q ss_pred cccCcceEEEccCCCEEEEEe
Q 030700 150 GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~ 170 (173)
....||++.+. +| .||++.
T Consensus 150 p~~~~nele~~-dg-~lyvn~ 168 (266)
T 2iwa_A 150 RVIRLNELEYI-NG-EVWANI 168 (266)
T ss_dssp ECCCEEEEEEE-TT-EEEEEE
T ss_pred ccccceeEEEE-CC-EEEEec
Confidence 13468999998 66 699875
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=3.9e-10 Score=86.03 Aligned_cols=139 Identities=16% Similarity=0.200 Sum_probs=102.0
Q ss_pred CCcceEEEcCCCC-EEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC-CeEEEEcc-CC-cEE
Q 030700 10 NHPEDVSVDGNGV-LYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSE-EG-VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~-~g-~~~ 83 (173)
..+.+++++|+|. ||++. .++.|..|+. +++..........+. +++++++++.+|++... ..+..++. ++ ...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4588999999885 66666 7789999996 566555444455788 99999999976887755 45666675 44 322
Q ss_pred EEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~d 162 (173)
.... + ..+..++++|+|+ +|++.. .++.|+.+|..+++..........|..++|+|+
T Consensus 111 ~~~~--~---~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 111 TVKT--G---KSPLGLALSPDGKKLYVTNN-----------------GDKTVSVINTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EEEC--S---SSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EEeC--C---CCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCcEEEEEecCCCcceEEECCC
Confidence 2221 1 3578899999997 667743 347899999988877666655677899999999
Q ss_pred CCEEEEEec
Q 030700 163 ERFLVVCES 171 (173)
Q Consensus 163 g~~lyv~~~ 171 (173)
++.||++..
T Consensus 169 g~~l~~~~~ 177 (391)
T 1l0q_A 169 GTKVYVANF 177 (391)
T ss_dssp SSEEEEEET
T ss_pred CCEEEEEeC
Confidence 999988753
No 82
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.30 E-value=1e-10 Score=89.25 Aligned_cols=144 Identities=12% Similarity=0.055 Sum_probs=92.1
Q ss_pred cCCcceEEEcCCCC-EEEEcCCCeEEEEcC--CCcEEEecc--ccCccccceEEccCCcE--EEEEe-------------
Q 030700 9 VNHPEDVSVDGNGV-LYTATGDGWIKRMHP--NGTWEDWHQ--VGSQSLLGLTTTKENNV--IIVCD------------- 68 (173)
Q Consensus 9 ~~~p~~l~~~~~g~-l~~~~~~~~i~~~~~--~g~~~~~~~--~~~~p~~gl~~~~~g~l--~~v~~------------- 68 (173)
...|.+++++|+|+ ||+++.+ .|..|+. +|+...... ..+.|. +++++++|+. +|+++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999999986 7777755 7777774 676544322 224588 9999999993 34443
Q ss_pred CCCe--EEEEccCC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCC-CCe
Q 030700 69 SQQG--LLKVSEEG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS-TNQ 143 (173)
Q Consensus 69 ~~~~--i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~-~~~ 143 (173)
.... ++.++.+| ...............+++++++|||+ +|+++.. .++|+.|+.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCC
Confidence 2222 33333456 33222211111124789999999997 7777532 2477777776 666
Q ss_pred eEEeec-----cccCcceEEEccCCCEEEEEec
Q 030700 144 TSLVLD-----GLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 144 ~~~~~~-----~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
...+.. ....|.+++|+|||++||++..
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 543321 1456899999999999999763
No 83
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.29 E-value=1.2e-11 Score=94.60 Aligned_cols=104 Identities=9% Similarity=0.146 Sum_probs=77.1
Q ss_pred eecCCccCCcceEEEcCCCCEEEEcC------------------CCeEEEEcCCCcEEEeccccCccccceEEccCCcEE
Q 030700 3 KLGEGIVNHPEDVSVDGNGVLYTATG------------------DGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVI 64 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~~g~l~~~~~------------------~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~ 64 (173)
++....+..|.+++++++|.+|+++. .++|+++++ +++..+.+....|+ ||++++|++.+
T Consensus 158 ~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~~~~~~~~~l~~pN-Gia~spDg~~l 235 (355)
T 3sre_A 158 TIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-NDVRVVAEGFDFAN-GINISPDGKYV 235 (355)
T ss_dssp EECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-TCCEEEEEEESSEE-EEEECTTSSEE
T ss_pred ccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-CeEEEeecCCcccC-cceECCCCCEE
Confidence 34445688999999999999988762 367999987 46655666677899 99999999888
Q ss_pred EEEeCC-CeEEEEc--cCC-cEEEEeccCCccccCCccEEEcC-CCcEEEEe
Q 030700 65 IVCDSQ-QGLLKVS--EEG-VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTV 111 (173)
Q Consensus 65 ~v~~~~-~~i~~~~--~~g-~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~ 111 (173)
|+++.. +.|++++ .+| .... ..+. . ...|+++++|+ +|++|++.
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~-~~~~-~-~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPL-RVLS-F-DTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEE-EEEE-C-SSEEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCeEEEEEECCCCcEecC-EEEe-C-CCCCceEEEeCCCCcEEEEe
Confidence 999976 4566666 356 3221 1111 0 25799999999 69999975
No 84
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.29 E-value=1.8e-10 Score=87.91 Aligned_cols=144 Identities=17% Similarity=0.215 Sum_probs=89.8
Q ss_pred CcceEEEcCCCC-EE--EEc-------------CCCeEEEEc--CCCcEEEecc-----ccCccccceEEccCCcEEEEE
Q 030700 11 HPEDVSVDGNGV-LY--TAT-------------GDGWIKRMH--PNGTWEDWHQ-----VGSQSLLGLTTTKENNVIIVC 67 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~--~~~-------------~~~~i~~~~--~~g~~~~~~~-----~~~~p~~gl~~~~~g~l~~v~ 67 (173)
.|.+++++|+|+ || +++ .++.+..++ .+|++..... ....++ ++++++||+.+|++
T Consensus 84 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~spdG~~l~~~ 162 (365)
T 1jof_A 84 HPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIH-GMVFDPTETYLYSA 162 (365)
T ss_dssp SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEE-EEEECTTSSEEEEE
T ss_pred CCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcce-EEEECCCCCEEEEE
Confidence 378899999997 23 333 355555554 4676543222 346788 99999999987888
Q ss_pred eCC-CeEEEEcc--CC-cEEEEeccCCc-cccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCC
Q 030700 68 DSQ-QGLLKVSE--EG-VTVLVSQFNGS-QLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST 141 (173)
Q Consensus 68 ~~~-~~i~~~~~--~g-~~~~~~~~~~~-~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 141 (173)
+.+ +.|..++. +| ...+... ... ....|.+++++|||+ +|+++... ..-.++.+++++
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~-~~~~~g~~p~~~~~spdg~~l~v~~~~~---------------~~v~v~~~~~~~ 226 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSV-DAPDPGDHPRWVAMHPTGNYLYALMEAG---------------NRICEYVIDPAT 226 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEE-ECSSTTCCEEEEEECTTSSEEEEEETTT---------------TEEEEEEECTTT
T ss_pred cCCCCEEEEEEECCCCCEEEeeeE-ecCCCCCCCCEeEECCCCCEEEEEECCC---------------CeEEEEEEeCCC
Confidence 865 45666663 46 4433221 111 124689999999996 77775320 112455566656
Q ss_pred CeeEE----eec---cc---c-------CcceEE-EccCCCEEEEEec
Q 030700 142 NQTSL----VLD---GL---Y-------FANGVA-LSEDERFLVVCES 171 (173)
Q Consensus 142 ~~~~~----~~~---~~---~-------~p~gi~-~~~dg~~lyv~~~ 171 (173)
++... +.. ++ . .|.+++ |+|||++||+++.
T Consensus 227 g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~ 274 (365)
T 1jof_A 227 HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECC
Confidence 65431 111 11 2 478999 9999999999864
No 85
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.29 E-value=1.3e-10 Score=88.85 Aligned_cols=144 Identities=15% Similarity=0.229 Sum_probs=96.2
Q ss_pred ccCCcceEEEcCCCCEEEEcC--------------CCeEEEEcCCCcE---------EEeccccCccccceEEcc-CCcE
Q 030700 8 IVNHPEDVSVDGNGVLYTATG--------------DGWIKRMHPNGTW---------EDWHQVGSQSLLGLTTTK-ENNV 63 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~~~~--------------~~~i~~~~~~g~~---------~~~~~~~~~p~~gl~~~~-~g~l 63 (173)
....+.+|+++|+|.||++.. .++|+|++++|++ ..+......|. ||++++ +|++
T Consensus 133 ~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~-Gla~d~~~g~l 211 (354)
T 3a9g_A 133 YIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQ-GIDWHRASGVM 211 (354)
T ss_dssp SSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCC-EEEECTTTCCE
T ss_pred CCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcc-eEEEeCCCCCE
Confidence 345688999999999999862 2689999998862 33434455799 999999 7888
Q ss_pred EEEEeCCC----eEEEEccCC-cE---E--------EEec-c-CCccccCCccEEE-------cCCCcEEEEeCcCCcCc
Q 030700 64 IIVCDSQQ----GLLKVSEEG-VT---V--------LVSQ-F-NGSQLRFANDVIE-------ASDGSLYFTVSSTKFTP 118 (173)
Q Consensus 64 ~~v~~~~~----~i~~~~~~g-~~---~--------~~~~-~-~~~~~~~~~~l~~-------~~dG~~~v~~~~~~~~~ 118 (173)
|+++.+. .+-.+.+.+ .. . +... . .+.+...|.++++ +.+|.+|+++..
T Consensus 212 -~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~----- 285 (354)
T 3a9g_A 212 -VATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLR----- 285 (354)
T ss_dssp -EEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETT-----
T ss_pred -EEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcC-----
Confidence 9998763 244444311 00 0 0000 0 0012246899999 468899998743
Q ss_pred ccceeeecccCCCceEEEEcCCC-Cee---EEeecc-ccCcceEEEccCCCEEEEEec
Q 030700 119 AEYYLDLVSGEPHGVLLKYDPST-NQT---SLVLDG-LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 119 ~~~~~~~~~~~~~~~v~~~d~~~-~~~---~~~~~~-~~~p~gi~~~~dg~~lyv~~~ 171 (173)
.++|++++++. +++ +.+..+ ...|.+|+++|||. |||++.
T Consensus 286 ------------~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 286 ------------GSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp ------------TTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEEC
T ss_pred ------------CCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc-EEEEEe
Confidence 36888888764 222 233333 56789999999995 888874
No 86
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.28 E-value=5.7e-10 Score=85.12 Aligned_cols=137 Identities=18% Similarity=0.249 Sum_probs=100.0
Q ss_pred CcceEEEcCCCC-EEEEc-CCCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCC-eEEEEcc-CC-cEEE
Q 030700 11 HPEDVSVDGNGV-LYTAT-GDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE-EG-VTVL 84 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~g-~~~~ 84 (173)
.+.+++++|+|. ||++. .++.|+.||.. ++..........+. +++++++|+.+|++.... .+..++. ++ ....
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPL-GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcc-eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 688999999885 77776 56899999964 55544444556788 999999999767777654 4666664 45 2222
Q ss_pred EeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCC
Q 030700 85 VSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDE 163 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg 163 (173)
... + ..+..++++|+|+ +|++.. .++.|+.+|..+++..........+.+++|+|++
T Consensus 154 ~~~--~---~~~~~~~~~~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 211 (391)
T 1l0q_A 154 VSV--G---RSPKGIAVTPDGTKVYVANF-----------------DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEG 211 (391)
T ss_dssp EEC--C---SSEEEEEECTTSSEEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSEEEEEEECTTS
T ss_pred Eec--C---CCcceEEECCCCCEEEEEeC-----------------CCCEEEEEECCCCeEEEEEecCCCccceEECCCC
Confidence 221 1 3578999999996 666642 3478999999888766666556678899999999
Q ss_pred CEEEEEe
Q 030700 164 RFLVVCE 170 (173)
Q Consensus 164 ~~lyv~~ 170 (173)
++||++.
T Consensus 212 ~~l~~~~ 218 (391)
T 1l0q_A 212 TKAYVTN 218 (391)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9999986
No 87
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.26 E-value=9.3e-10 Score=82.02 Aligned_cols=142 Identities=9% Similarity=0.056 Sum_probs=94.6
Q ss_pred CCcceEEEcCCCC-EEEEcCC-CeEEEEcC---CCcEEEe--ccccCccccceEEccCCcEEEEEeCCC-eEEEEcc-CC
Q 030700 10 NHPEDVSVDGNGV-LYTATGD-GWIKRMHP---NGTWEDW--HQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~~-~~i~~~~~---~g~~~~~--~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~g 80 (173)
..|.+++++|+|. ||++..+ +.|..|+. +|+...+ ......|. +++++++|+.+|++.... .+..++. ++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 5688999999886 7877754 78887764 3454332 22234788 999999999768887644 3555553 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCC-CeeEEee------ccc
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST-NQTSLVL------DGL 151 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~------~~~ 151 (173)
........... ..+..++++|+|+ +|+++. .++.|..||..+ ++..... ...
T Consensus 117 ~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~-----------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 177 (343)
T 1ri6_A 117 LPVGVVDVVEGL--DGCHSANISPDNRTLWVPAL-----------------KQDRICLFTVSDDGHLVAQDPAEVTTVEG 177 (343)
T ss_dssp EEEEEEEEECCC--TTBCCCEECTTSSEEEEEEG-----------------GGTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred ccccccccccCC--CCceEEEECCCCCEEEEecC-----------------CCCEEEEEEecCCCceeeecccccccCCC
Confidence 22222222221 3588999999996 777752 235788888765 5543221 223
Q ss_pred cCcceEEEccCCCEEEEEec
Q 030700 152 YFANGVALSEDERFLVVCES 171 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~~~ 171 (173)
..|++++|+|++++||++..
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp CCEEEEEECTTSSEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeC
Confidence 57889999999999998863
No 88
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.25 E-value=2.5e-10 Score=84.92 Aligned_cols=134 Identities=13% Similarity=0.049 Sum_probs=92.3
Q ss_pred CcceEEEcCCC-CEEEEc-CCCeEEEEcC-CCcEEEeccccC------ccccceEEccCCcEEEEEe------------C
Q 030700 11 HPEDVSVDGNG-VLYTAT-GDGWIKRMHP-NGTWEDWHQVGS------QSLLGLTTTKENNVIIVCD------------S 69 (173)
Q Consensus 11 ~p~~l~~~~~g-~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~------~p~~gl~~~~~g~l~~v~~------------~ 69 (173)
.|.+++++|+| .+|++. .++.|+.++. +++......... .|. +++++++|+.+|++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 48999999988 578777 5678999995 555543222222 688 999999998778885 2
Q ss_pred CCeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 70 QQGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 70 ~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
...+..++. ++ ....... + ..+.+++++|||+ +|+++ +.|+.+|.+++++..
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~--------------------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLG--------------------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEES--------------------SSEEEEETTTTEEEE
T ss_pred CceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeC--------------------CeEEEEECCCCcEee
Confidence 356777775 44 2222221 1 3688999999997 77762 478999998887655
Q ss_pred eeccccCcceEEEccCCCEEEEEe
Q 030700 147 VLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 147 ~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.......+..++|+||++.||++.
T Consensus 169 ~~~~~~~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 169 DKPIQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp EECSTTTTTTTBCCCBCCCCCCCC
T ss_pred eeeccccCCCceeCCCccEEeeec
Confidence 444333344568899988776543
No 89
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.24 E-value=3.7e-10 Score=90.93 Aligned_cols=142 Identities=11% Similarity=0.114 Sum_probs=97.6
Q ss_pred cceEEEcCCC-CEEEEcCCCeEEEEcC---CCcEEEeccccCccccceEEcc----CCcEEEEEeCC-CeEEEEcc-CC-
Q 030700 12 PEDVSVDGNG-VLYTATGDGWIKRMHP---NGTWEDWHQVGSQSLLGLTTTK----ENNVIIVCDSQ-QGLLKVSE-EG- 80 (173)
Q Consensus 12 p~~l~~~~~g-~l~~~~~~~~i~~~~~---~g~~~~~~~~~~~p~~gl~~~~----~g~l~~v~~~~-~~i~~~~~-~g- 80 (173)
|.+++++|+| .||+++.++.|..||. +++.......+..|. +++|++ +|+++|+++.. ..+..+|. ++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 8899999988 6888887799999997 445444334567899 999999 99998998854 45666663 44
Q ss_pred -cEEEEec---cCC---ccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE--eecc
Q 030700 81 -VTVLVSQ---FNG---SQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL--VLDG 150 (173)
Q Consensus 81 -~~~~~~~---~~~---~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~--~~~~ 150 (173)
...+... .++ .+...+..+++++++. +|++.. .+++|+.+|..+.+... ....
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEECTTSSSCEEEEEEC
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CCCeEEEEEecCCCcceeEEecc
Confidence 3333211 111 1123567899999876 555532 34789999987543211 1223
Q ss_pred ccCcceEEEccCCCEEEEEec
Q 030700 151 LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~ 171 (173)
...|.+++|+|||+++|++..
T Consensus 323 ~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEG
T ss_pred CcCccCceECCCCCEEEEEec
Confidence 567899999999999999864
No 90
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.23 E-value=7.2e-10 Score=82.91 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=64.8
Q ss_pred CcceEEEcCCCC-EEEEc-CCCeEEEEcCC-CcEEEeccc-------cCccccceEEccCCcEEEEEeCC----------
Q 030700 11 HPEDVSVDGNGV-LYTAT-GDGWIKRMHPN-GTWEDWHQV-------GSQSLLGLTTTKENNVIIVCDSQ---------- 70 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~~~~i~~~~~~-g~~~~~~~~-------~~~p~~gl~~~~~g~l~~v~~~~---------- 70 (173)
.|.+++++|+|+ +|++. .++.|+.++.+ ++....... ...+. +++++++|+.+|++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 589999999885 78776 67889999964 554432222 22378 99999999987887633
Q ss_pred --CeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCCCcEEEEe
Q 030700 71 --QGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTV 111 (173)
Q Consensus 71 --~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~ 111 (173)
..+..++. ++ ........... ..+..++++|||++|++.
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~l~~~~ 165 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMP--RQVYLMRAADDGSLYVAG 165 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECC--SSCCCEEECTTSCEEEES
T ss_pred CCCeEEEEECCCccccceeeeccCC--CcccceeECCCCcEEEcc
Confidence 45777773 43 21111111111 257889999999987753
No 91
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.23 E-value=1.5e-09 Score=83.88 Aligned_cols=139 Identities=13% Similarity=0.065 Sum_probs=100.3
Q ss_pred CCcceEEEcCCCC-EEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC--------CCeEEEEcc
Q 030700 10 NHPEDVSVDGNGV-LYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS--------QQGLLKVSE 78 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~--------~~~i~~~~~ 78 (173)
..+.+++++|+|. +|++. .++.|+.||. +++..........+. +++++++|+.++++.. ...+..++.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~ 290 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPR-GLLLSKDGKELYIAQFSASNQESGGGRLGIYSM 290 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEE-EEEECTTSSEEEEEEEESCTTCSCCEEEEEEET
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCce-EEEEcCCCCEEEEEECCCCccccCCCeEEEEEC
Confidence 5688999999875 66776 6789999996 555554444456688 9999999988677763 224556664
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFAN 155 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~ 155 (173)
++ ....... . ..+..++++|+|+ +|++.. .++.|..+|.++++..........+.
T Consensus 291 ~~~~~~~~~~~-~----~~~~~~~~~~~g~~l~~~~~-----------------~~~~v~v~d~~~~~~~~~~~~~~~~~ 348 (433)
T 3bws_A 291 DKEKLIDTIGP-P----GNKRHIVSGNTENKIYVSDM-----------------CCSKIEVYDLKEKKVQKSIPVFDKPN 348 (433)
T ss_dssp TTTEEEEEEEE-E----ECEEEEEECSSTTEEEEEET-----------------TTTEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCCcEEeeccC-C----CCcceEEECCCCCEEEEEec-----------------CCCEEEEEECCCCcEEEEecCCCCCC
Confidence 45 2222211 1 2567899999995 777743 34789999998887666655567789
Q ss_pred eEEEccCCCEEEEEec
Q 030700 156 GVALSEDERFLVVCES 171 (173)
Q Consensus 156 gi~~~~dg~~lyv~~~ 171 (173)
+++|+|+++.||++..
T Consensus 349 ~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 349 TIALSPDGKYLYVSCR 364 (433)
T ss_dssp EEEECTTSSEEEEEEC
T ss_pred eEEEcCCCCEEEEEec
Confidence 9999999999999864
No 92
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.22 E-value=8.8e-10 Score=82.16 Aligned_cols=143 Identities=13% Similarity=0.170 Sum_probs=91.2
Q ss_pred CcceEEEcCCCC-EEEEc-CCCeEEEEcC-CCc---EEEeccccCccccceEEccCCcEEEEEe-CCCeEEEEcc--CC-
Q 030700 11 HPEDVSVDGNGV-LYTAT-GDGWIKRMHP-NGT---WEDWHQVGSQSLLGLTTTKENNVIIVCD-SQQGLLKVSE--EG- 80 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~~~~i~~~~~-~g~---~~~~~~~~~~p~~gl~~~~~g~l~~v~~-~~~~i~~~~~--~g- 80 (173)
.|.+++++|+|. ||++. .++.|..|+. +|. ..........+. +++++++|+.+|++. ....+..++. ++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCH-SANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBC-CCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCce-EEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 789999999886 77777 4677888875 443 222233445688 999999998778887 3345666553 36
Q ss_pred cEEEEe-ccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCC--CCeeEEee--c----c
Q 030700 81 VTVLVS-QFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS--TNQTSLVL--D----G 150 (173)
Q Consensus 81 ~~~~~~-~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~--~~~~~~~~--~----~ 150 (173)
...... .........|..++++|+|+ +|+++.. ++.+..++.+ +++..... . +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 433220 11111124678899999997 7777532 2567777763 34432211 1 1
Q ss_pred ---ccCcceEEEccCCCEEEEEec
Q 030700 151 ---LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 151 ---~~~p~gi~~~~dg~~lyv~~~ 171 (173)
...+.+++|+||+++||++..
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEET
T ss_pred ccccCCccceEECCCCCEEEEEec
Confidence 234557999999999998764
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.20 E-value=2.2e-09 Score=82.95 Aligned_cols=153 Identities=20% Similarity=0.237 Sum_probs=102.8
Q ss_pred CCcceEEEcCCC-CEEEEc--------CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCC-eEEEEcc
Q 030700 10 NHPEDVSVDGNG-VLYTAT--------GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE 78 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~--------~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~ 78 (173)
..|.+++++|+| .+|++. .++.|+.|+. +++..........+. +++++++++.+|++.... .+..++.
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~v~v~d~ 332 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKR-HIVSGNTENKIYVSDMCCSKIEVYDL 332 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEE-EEEECSSTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcc-eEEECCCCCEEEEEecCCCEEEEEEC
Confidence 358899999988 566665 2678999995 455544444455788 999999997658876554 4666664
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFAN 155 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~ 155 (173)
++ ....... ...+..++++|+|+ +|++...... . ....+.....+|.|+.+|..+++..........+.
T Consensus 333 ~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~~~~-~--~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~ 404 (433)
T 3bws_A 333 KEKKVQKSIPV-----FDKPNTIALSPDGKYLYVSCRGPNH-P--TEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPT 404 (433)
T ss_dssp TTTEEEEEEEC-----SSSEEEEEECTTSSEEEEEECCCCC-T--TTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEE
T ss_pred CCCcEEEEecC-----CCCCCeEEEcCCCCEEEEEecCCCc-c--ccccccccccceEEEEEECCCCcEEEEecCCCCCc
Confidence 44 2222221 14678999999997 6776543110 0 00111223446799999998887766665567789
Q ss_pred eEEEccCCCEEEEEec
Q 030700 156 GVALSEDERFLVVCES 171 (173)
Q Consensus 156 gi~~~~dg~~lyv~~~ 171 (173)
+++|+|||++||++..
T Consensus 405 ~~~~s~dg~~l~~~~~ 420 (433)
T 3bws_A 405 GLDVSPDNRYLVISDF 420 (433)
T ss_dssp EEEECTTSCEEEEEET
T ss_pred eEEEcCCCCEEEEEEC
Confidence 9999999999998753
No 94
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=1.2e-09 Score=85.49 Aligned_cols=67 Identities=12% Similarity=0.078 Sum_probs=49.7
Q ss_pred CCcceEEEcCCC-CEEEEcC----------CCeEEEEcC-CCcEEEeccc--------cCccccceEEccCCcEEEEEeC
Q 030700 10 NHPEDVSVDGNG-VLYTATG----------DGWIKRMHP-NGTWEDWHQV--------GSQSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~~----------~~~i~~~~~-~g~~~~~~~~--------~~~p~~gl~~~~~g~l~~v~~~ 69 (173)
..| +++++|+| .||+++. ++.|..+|. +++....... ...|. ++++++||+.+|+++.
T Consensus 119 ~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spDGk~lyV~n~ 196 (426)
T 3c75_H 119 FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPDNKNLLFYQF 196 (426)
T ss_dssp SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTTSSEEEEEEC
T ss_pred CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCCCCEEEEEec
Confidence 358 99999987 6999872 457999995 4555433222 35799 9999999999899985
Q ss_pred C--CeEEEEcc
Q 030700 70 Q--QGLLKVSE 78 (173)
Q Consensus 70 ~--~~i~~~~~ 78 (173)
. +.+..+|.
T Consensus 197 ~~~~~VsVID~ 207 (426)
T 3c75_H 197 SPAPAVGVVDL 207 (426)
T ss_dssp SSSCEEEEEET
T ss_pred CCCCeEEEEEC
Confidence 3 46777774
No 95
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.18 E-value=1.6e-09 Score=81.68 Aligned_cols=143 Identities=13% Similarity=0.086 Sum_probs=94.6
Q ss_pred CCcceEEE---cCCCCEEEE-cC-------------CCeEEEEcCC----CcEEEecc--------------ccCccccc
Q 030700 10 NHPEDVSV---DGNGVLYTA-TG-------------DGWIKRMHPN----GTWEDWHQ--------------VGSQSLLG 54 (173)
Q Consensus 10 ~~p~~l~~---~~~g~l~~~-~~-------------~~~i~~~~~~----g~~~~~~~--------------~~~~p~~g 54 (173)
..|.||.+ |++|+||+. +. ...|+++|.+ |+.....+ ....++ +
T Consensus 63 ~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n-D 141 (334)
T 2p9w_A 63 QQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV-Q 141 (334)
T ss_dssp EEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE-E
T ss_pred ceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc-e
Confidence 35789999 789999974 31 4679999966 65432221 113578 9
Q ss_pred eEEccCCcEEEEEeC-C-CeEEEEccCC--cEEEEecc-CCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccC
Q 030700 55 LTTTKENNVIIVCDS-Q-QGLLKVSEEG--VTVLVSQF-NGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGE 129 (173)
Q Consensus 55 l~~~~~g~l~~v~~~-~-~~i~~~~~~g--~~~~~~~~-~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~ 129 (173)
+++|++|+. ||++. . ..|++++++| ...+.... .......+++|+++|+|+++++.. .
T Consensus 142 vavD~~Gna-YVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~----------------~ 204 (334)
T 2p9w_A 142 SAQDRDGNS-YVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFG----------------G 204 (334)
T ss_dssp EEECTTSCE-EEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEES----------------S
T ss_pred eEECCCCCE-EEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEc----------------C
Confidence 999999999 99764 3 5699999998 34333211 122235689999999997555431 1
Q ss_pred CCceEEEEcCCCCee--EEee--c---cccCcceE-EEccCCCEEEEEec
Q 030700 130 PHGVLLKYDPSTNQT--SLVL--D---GLYFANGV-ALSEDERFLVVCES 171 (173)
Q Consensus 130 ~~~~v~~~d~~~~~~--~~~~--~---~~~~p~gi-~~~~dg~~lyv~~~ 171 (173)
.++|++||..+-.. ..+. . .+..|.+| +.-.+|+.|+|++.
T Consensus 205 -~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 205 -PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp -SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred -CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC
Confidence 37999999863211 1111 1 35678886 44458888899874
No 96
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.17 E-value=2.7e-09 Score=80.83 Aligned_cols=143 Identities=15% Similarity=0.248 Sum_probs=88.3
Q ss_pred cCCcceEEEcCCCC-EEEEcCC----CeEE--EEcCC-CcEEEecc---ccCccccceEEccCCcEEEEEeCCC-eEEEE
Q 030700 9 VNHPEDVSVDGNGV-LYTATGD----GWIK--RMHPN-GTWEDWHQ---VGSQSLLGLTTTKENNVIIVCDSQQ-GLLKV 76 (173)
Q Consensus 9 ~~~p~~l~~~~~g~-l~~~~~~----~~i~--~~~~~-g~~~~~~~---~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~ 76 (173)
...|.+++++|+|+ ||++..+ +.|. .++.+ |++..+.. ....|. ++++ +++.+|+++... .+..+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEE
Confidence 46799999999985 7877653 5664 45554 65544322 345788 8888 777768888654 34444
Q ss_pred c--cCC-cEEEEe--ccCC-------ccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceE--EEEcCCC
Q 030700 77 S--EEG-VTVLVS--QFNG-------SQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVL--LKYDPST 141 (173)
Q Consensus 77 ~--~~g-~~~~~~--~~~~-------~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v--~~~d~~~ 141 (173)
+ .++ ...+.. ...+ +...+++.++++|||+ +|+++.. ++.+ |.++..+
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~ 188 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNA 188 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTC
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCC
Confidence 4 344 221111 0111 1123568899999997 8888642 2344 4455554
Q ss_pred C----e-e-------EEeeccccCcceEEEccCCCEEEEEec
Q 030700 142 N----Q-T-------SLVLDGLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 142 ~----~-~-------~~~~~~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
+ + + .........|++++|+|||++||+++.
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 230 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINE 230 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcC
Confidence 3 2 2 122233567889999999999999873
No 97
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.17 E-value=3.4e-09 Score=78.72 Aligned_cols=135 Identities=10% Similarity=0.042 Sum_probs=87.6
Q ss_pred EEcCCCeEEEEcC-CCcEEEeccccC---ccccceEEccCCcEEEEEeCC-CeEEEEcc-CC-c-EEEEeccCCccccCC
Q 030700 25 TATGDGWIKRMHP-NGTWEDWHQVGS---QSLLGLTTTKENNVIIVCDSQ-QGLLKVSE-EG-V-TVLVSQFNGSQLRFA 96 (173)
Q Consensus 25 ~~~~~~~i~~~~~-~g~~~~~~~~~~---~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~-~g-~-~~~~~~~~~~~~~~~ 96 (173)
+...++.|..+|. +++......... .|. +++++++|+.+|++... ..+..++. ++ . ..+.....+.....|
T Consensus 6 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 6 APARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSL 84 (337)
T ss_dssp EEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECT
T ss_pred EcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccc
Confidence 3447788999986 455444333344 588 99999999876888765 45777775 55 3 223211111011268
Q ss_pred ccEEEcCCCc-EEEEeCcCCcCcccceeeecccC---CCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEE
Q 030700 97 NDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGE---PHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 97 ~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
.+++++|||+ +|+++..... .... .++.|+.+|.++++..........|.+++|+||+++||++
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~---------~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRL---------ELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL 152 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEE---------CSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE
T ss_pred cceEECCCCCEEEEEeccccc---------ccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe
Confidence 8999999995 7777421000 0000 2368999999888765555445678999999999999987
No 98
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.14 E-value=4.9e-09 Score=80.13 Aligned_cols=67 Identities=16% Similarity=0.140 Sum_probs=46.6
Q ss_pred CCcceEEEcCCC-CEEEEcC----------CCeEEEEcCC-CcEEEecc-------ccCccccceEEccCCcEEEEEeCC
Q 030700 10 NHPEDVSVDGNG-VLYTATG----------DGWIKRMHPN-GTWEDWHQ-------VGSQSLLGLTTTKENNVIIVCDSQ 70 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~~----------~~~i~~~~~~-g~~~~~~~-------~~~~p~~gl~~~~~g~l~~v~~~~ 70 (173)
..| +++++|+| .+|++.. ++.|..+|.. ++...... ....|. ++++++||++||+++..
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~-~i~~spdg~~l~v~n~~ 128 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG-LFRQTTDGKFIVLQNAS 128 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG-GEEECTTSSEEEEEEES
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc-eEEECCCCCEEEEECCC
Confidence 357 99999988 6888762 3458899853 44432222 235799 99999999998999854
Q ss_pred --CeEEEEcc
Q 030700 71 --QGLLKVSE 78 (173)
Q Consensus 71 --~~i~~~~~ 78 (173)
+.+..++.
T Consensus 129 ~~~~v~v~d~ 138 (361)
T 2oiz_A 129 PATSIGIVDV 138 (361)
T ss_dssp SSEEEEEEET
T ss_pred CCCeEEEEEC
Confidence 34555553
No 99
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.13 E-value=1.9e-09 Score=80.60 Aligned_cols=149 Identities=12% Similarity=0.027 Sum_probs=91.4
Q ss_pred ceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccC--ccccceEEccCCcEEEEEeCC-CeEEEEcc-CC-cEEEE
Q 030700 13 EDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGS--QSLLGLTTTKENNVIIVCDSQ-QGLLKVSE-EG-VTVLV 85 (173)
Q Consensus 13 ~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~--~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~-~g-~~~~~ 85 (173)
.|+++.+++.+|++. .++.|+.+|. +++......... .|. +++++++|+.+|++... ..+..++. ++ .....
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 467778888999877 7889999996 455443333334 688 99999999876888755 45777775 45 32222
Q ss_pred eccC--CccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE---EeeccccCcceEEE
Q 030700 86 SQFN--GSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS---LVLDGLYFANGVAL 159 (173)
Q Consensus 86 ~~~~--~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~p~gi~~ 159 (173)
.... +.....+.+++++|||+ +|++..........+ ....+.|+.+|.++++.. ........+.+++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~------~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY------VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE------EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred EcccccccccccccceEECCCCCEEEEEccccccccccc------ccCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence 2111 00123589999999996 666642100000000 001368999998764321 12222345778999
Q ss_pred ccCCCEEEEE
Q 030700 160 SEDERFLVVC 169 (173)
Q Consensus 160 ~~dg~~lyv~ 169 (173)
+|||+ +|++
T Consensus 156 s~dg~-l~~~ 164 (349)
T 1jmx_B 156 ADDGS-LYVA 164 (349)
T ss_dssp CTTSC-EEEE
T ss_pred CCCCc-EEEc
Confidence 99999 8875
No 100
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=1.2e-08 Score=78.55 Aligned_cols=68 Identities=15% Similarity=0.084 Sum_probs=48.2
Q ss_pred CCcceEEEcCCC-CEEEEcC----------CCeEEEEcCC-CcEEEeccc--------cCccccceEEccCCcEEEEEeC
Q 030700 10 NHPEDVSVDGNG-VLYTATG----------DGWIKRMHPN-GTWEDWHQV--------GSQSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~~----------~~~i~~~~~~-g~~~~~~~~--------~~~p~~gl~~~~~g~l~~v~~~ 69 (173)
..| +++++|+| .||+++. ++.|..+|.. ++....... ...|. ++++++||+.||+++.
T Consensus 67 ~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~ 144 (373)
T 2mad_H 67 FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNADLLFFQF 144 (373)
T ss_pred CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCCEEEEEec
Confidence 357 99999988 6998862 3568899863 443332222 24689 9999999999899875
Q ss_pred C--CeEEEEccCC
Q 030700 70 Q--QGLLKVSEEG 80 (173)
Q Consensus 70 ~--~~i~~~~~~g 80 (173)
. +.+..+| ..
T Consensus 145 ~~~~~v~viD-~t 156 (373)
T 2mad_H 145 AAGPAVGLVV-QG 156 (373)
T ss_pred CCCCeEEEEE-CC
Confidence 3 5577777 43
No 101
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.11 E-value=5.4e-09 Score=84.63 Aligned_cols=145 Identities=11% Similarity=0.132 Sum_probs=96.5
Q ss_pred CCcceEEEcCCC-CEEEEcCCCeEEEEcC---CCcEEEeccccCccccceEEc----cCCcEEEEEeCC-CeEEEEcc-C
Q 030700 10 NHPEDVSVDGNG-VLYTATGDGWIKRMHP---NGTWEDWHQVGSQSLLGLTTT----KENNVIIVCDSQ-QGLLKVSE-E 79 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~~~~~i~~~~~---~g~~~~~~~~~~~p~~gl~~~----~~g~l~~v~~~~-~~i~~~~~-~ 79 (173)
..|++++++|+| .+|+++.++.|..+|. +++...-...+..|. +++++ +||+++|+++.. +.+..+|. +
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 468899999988 5888888889999997 455554445567899 99999 699988998866 45666664 3
Q ss_pred C--cEEEEec---cCC---ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe--ec
Q 030700 80 G--VTVLVSQ---FNG---SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV--LD 149 (173)
Q Consensus 80 g--~~~~~~~---~~~---~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~--~~ 149 (173)
. +..+... .++ .+..++..+..++++..|+.+. ...|.|+.+|....+...+ ..
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----------------~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----------------KETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----------------TTTTEEEEEETTCSSEEEEEEEE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----------------cCCCeEEEEecCCCccceeeeee
Confidence 3 3332211 111 0112445777788765444421 1347899998764321111 12
Q ss_pred cccCcceEEEccCCCEEEEEec
Q 030700 150 GLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
....+.++.|+|||+++|++..
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~ 361 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAAN 361 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEG
T ss_pred ccccccCceECCCCCEEEEEeC
Confidence 2457889999999999999874
No 102
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.10 E-value=5.1e-09 Score=80.81 Aligned_cols=135 Identities=12% Similarity=0.006 Sum_probs=90.1
Q ss_pred EcCCC-CEEEEcC-----CCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC----------CCeEEEEcc-
Q 030700 17 VDGNG-VLYTATG-----DGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS----------QQGLLKVSE- 78 (173)
Q Consensus 17 ~~~~g-~l~~~~~-----~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~----------~~~i~~~~~- 78 (173)
..|++ .+|+++. .+.|+.+|. +++.....+.+..| ++++++||+.+|+++. .+.+..+|.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 34566 7999984 578999996 45555544556667 5999999998899974 234677775
Q ss_pred CC--cEEEEeccCCc---cccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc--
Q 030700 79 EG--VTVLVSQFNGS---QLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-- 150 (173)
Q Consensus 79 ~g--~~~~~~~~~~~---~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-- 150 (173)
++ ...+.. ..++ ....|.+++++|||+ +|+++.. .++.|..+|.+++++......
T Consensus 118 t~~v~~~I~v-~~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~~VsVID~~t~~vv~tI~v~g 180 (386)
T 3sjl_D 118 TLLPTADIEL-PDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAPAVGVVDLEGKAFKRMLDVPD 180 (386)
T ss_dssp TCCEEEEEEE-TTCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCS
T ss_pred CCeEEEEEEC-CCccccccCCCCceEEEcCCCCEEEEEEcC----------------CCCeEEEEECCCCcEEEEEECCC
Confidence 44 333321 1111 124799999999996 8988632 236888999988875433321
Q ss_pred --ccCcce----EEEccCCCEEEEEe
Q 030700 151 --LYFANG----VALSEDERFLVVCE 170 (173)
Q Consensus 151 --~~~p~g----i~~~~dg~~lyv~~ 170 (173)
...|.| +++++||+.+||+-
T Consensus 181 ~~~~~P~g~~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 181 CYHIFPTAPDTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp EEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred cceeecCCCceeEEECCCCCEEEEEC
Confidence 223555 48889999888864
No 103
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.07 E-value=3.7e-08 Score=71.97 Aligned_cols=141 Identities=13% Similarity=0.131 Sum_probs=90.2
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEc--CCCcEE--Eecc-c-cC-----ccccceEEccCCcEEEEEeCC-C-eEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMH--PNGTWE--DWHQ-V-GS-----QSLLGLTTTKENNVIIVCDSQ-Q-GLL 74 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~--~~g~~~--~~~~-~-~~-----~p~~gl~~~~~g~l~~v~~~~-~-~i~ 74 (173)
...+|||+++++|.+|+++ .+++++.++ .++... .... . .. ... ||+++++++.||++... . .++
T Consensus 69 ~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~E-GLA~d~~~~~L~va~E~~p~~i~ 147 (255)
T 3qqz_A 69 VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFE-GLAYSRQDHTFWFFKEKNPIEVY 147 (255)
T ss_dssp CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCE-EEEEETTTTEEEEEEESSSEEEE
T ss_pred CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcc-eEEEeCCCCEEEEEECcCCceEE
Confidence 5779999999999888877 667887765 445321 1111 1 11 238 99999988555776644 3 677
Q ss_pred EEc--cCC--cEEEEec-c-CCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe
Q 030700 75 KVS--EEG--VTVLVSQ-F-NGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV 147 (173)
Q Consensus 75 ~~~--~~g--~~~~~~~-~-~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 147 (173)
.++ ..+ ...+... . .......+.++++|| .|++|+... .+..|..+|+++. +...
T Consensus 148 ~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~-----------------~s~~L~~~d~~g~-~~~~ 209 (255)
T 3qqz_A 148 KVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSH-----------------ESRALQEVTLVGE-VIGE 209 (255)
T ss_dssp EEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEET-----------------TTTEEEEECTTCC-EEEE
T ss_pred EEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEEC-----------------CCCeEEEEcCCCC-EEEE
Confidence 776 222 3333210 0 111234689999999 578888753 2368899998744 3322
Q ss_pred e---cc-------ccCcceEEEccCCCEEEEE
Q 030700 148 L---DG-------LYFANGVALSEDERFLVVC 169 (173)
Q Consensus 148 ~---~~-------~~~p~gi~~~~dg~~lyv~ 169 (173)
. .+ ++.|.||||+++|+ |||+
T Consensus 210 ~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv 240 (255)
T 3qqz_A 210 MSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV 240 (255)
T ss_dssp EECSTTGGGCSSCCCSEEEEEECTTCC-EEEE
T ss_pred EEcCCccCCcccccCCCCeeEECCCCC-EEEE
Confidence 2 11 36899999999997 7775
No 104
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.06 E-value=2.6e-08 Score=77.98 Aligned_cols=142 Identities=15% Similarity=0.063 Sum_probs=87.8
Q ss_pred cceEEEcCCCCEE-EEc-------------------CCCeEEEEcCC-CcEEEeccc---cCccccceEE--ccCCcEEE
Q 030700 12 PEDVSVDGNGVLY-TAT-------------------GDGWIKRMHPN-GTWEDWHQV---GSQSLLGLTT--TKENNVII 65 (173)
Q Consensus 12 p~~l~~~~~g~l~-~~~-------------------~~~~i~~~~~~-g~~~~~~~~---~~~p~~gl~~--~~~g~l~~ 65 (173)
+-++.+.|+++++ +++ ...+|..||.+ ++.....+. +..|. +|.| +++++.+|
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~-~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMAL-ELRPLHDPTKLMGF 268 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEE-EEEECSSTTCCEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccc-eeEeeECCCCCEEE
Confidence 3347778988655 443 15789999864 443332232 24687 8877 99999989
Q ss_pred EEeC-----CC-eEEEEcc-CC-cE--EEEeccC----Cc----c------ccCCccEEEcCCCc-EEEEeCcCCcCccc
Q 030700 66 VCDS-----QQ-GLLKVSE-EG-VT--VLVSQFN----GS----Q------LRFANDVIEASDGS-LYFTVSSTKFTPAE 120 (173)
Q Consensus 66 v~~~-----~~-~i~~~~~-~g-~~--~~~~~~~----~~----~------~~~~~~l~~~~dG~-~~v~~~~~~~~~~~ 120 (173)
++.. .+ .++.+.. +| .+ ...+... +. + ...|.+|.+++||+ +|+++..
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg------- 341 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG------- 341 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT-------
T ss_pred EEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC-------
Confidence 8775 43 4554442 35 22 2221111 10 0 25689999999997 8998643
Q ss_pred ceeeecccCCCceEEEEcCC-CCeeEEe---eccc--------------cCcceEEEccCCCEEEEEec
Q 030700 121 YYLDLVSGEPHGVLLKYDPS-TNQTSLV---LDGL--------------YFANGVALSEDERFLVVCES 171 (173)
Q Consensus 121 ~~~~~~~~~~~~~v~~~d~~-~~~~~~~---~~~~--------------~~p~gi~~~~dg~~lyv~~~ 171 (173)
.+.|..||.. .++.+++ ..+. ..|.++++||||++|||+++
T Consensus 342 ----------~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaNs 400 (462)
T 2ece_A 342 ----------IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTNS 400 (462)
T ss_dssp ----------TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEECC
T ss_pred ----------CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEcC
Confidence 2567666642 2222222 2221 25999999999999999984
No 105
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.05 E-value=6.3e-08 Score=71.42 Aligned_cols=137 Identities=11% Similarity=0.013 Sum_probs=92.2
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCCCcEEEecccc--CccccceEEccCCcEEEEEeCC--CeEEEEccCC--cEE
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVG--SQSLLGLTTTKENNVIIVCDSQ--QGLLKVSEEG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~~~~~~--~~p~~gl~~~~~g~l~~v~~~~--~~i~~~~~~g--~~~ 83 (173)
..+.+++++|+|++|++ .++.|+.+|++|+..--.... .... ++.+.++|++ ++++.. ..++.++++| +..
T Consensus 37 ~~~~~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~-lv~~~~~~~~v~~vd~~Gk~l~~ 113 (276)
T 3no2_A 37 WECNSVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNA-LVAWCGHPSTILEVNMKGEVLSK 113 (276)
T ss_dssp CCCCEEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCE-EEEEESTTEEEEEECTTSCEEEE
T ss_pred CCCcCeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCE-EEEecCCCCEEEEEeCCCCEEEE
Confidence 35889999999999995 467899999988754322222 2456 7888999999 666544 4577788888 333
Q ss_pred EEeccC-CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccC
Q 030700 84 LVSQFN-GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~-~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~d 162 (173)
+..... ..+...+..++..++|++++++.. +++|+.+|++ |+..--......|.++.+.++
T Consensus 114 ~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~ 175 (276)
T 3no2_A 114 TEFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDN 175 (276)
T ss_dssp EEECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECTT
T ss_pred EeccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcCC
Confidence 321111 122346788899999999998643 3689999998 654222222346777888888
Q ss_pred CCEEE
Q 030700 163 ERFLV 167 (173)
Q Consensus 163 g~~ly 167 (173)
|+.++
T Consensus 176 g~~~v 180 (276)
T 3no2_A 176 GDCLV 180 (276)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 77444
No 106
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.03 E-value=1.8e-08 Score=76.71 Aligned_cols=143 Identities=17% Similarity=0.162 Sum_probs=93.3
Q ss_pred cCCcceEEEcCCCCEEEEc--------------CCCeEEEEcCCCcE---------EEeccccCccccceEEccCCcEEE
Q 030700 9 VNHPEDVSVDGNGVLYTAT--------------GDGWIKRMHPNGTW---------EDWHQVGSQSLLGLTTTKENNVII 65 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~--------------~~~~i~~~~~~g~~---------~~~~~~~~~p~~gl~~~~~g~l~~ 65 (173)
......|+++|+|.||++. ..++|+|++++|++ +.+......|. |++++++|++ |
T Consensus 139 ~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~-Gla~dp~G~L-~ 216 (347)
T 3das_A 139 IHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQ-GLAWDDKQRL-F 216 (347)
T ss_dssp SCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCC-EEEECTTCCE-E
T ss_pred CccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcc-eEEECCCCCE-E
Confidence 3456679999999999985 24899999998863 23333445799 9999999998 9
Q ss_pred EEeCCC----eEEEEccCC-c--EEEEec--cCC--cc-------ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecc
Q 030700 66 VCDSQQ----GLLKVSEEG-V--TVLVSQ--FNG--SQ-------LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVS 127 (173)
Q Consensus 66 v~~~~~----~i~~~~~~g-~--~~~~~~--~~~--~~-------~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~ 127 (173)
+++.+. .+.++.+.+ - ...... ..+ .| ...|.+|++. +|.+|++...
T Consensus 217 ~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~-------------- 281 (347)
T 3das_A 217 ASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLR-------------- 281 (347)
T ss_dssp EEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEEST--------------
T ss_pred EEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeecccc--------------
Confidence 998653 355443321 0 000000 000 01 1367889988 5889998643
Q ss_pred cCCCceEEEEcCCCCe----eEEeecc-ccCcceEEEccCCCEEEEEecC
Q 030700 128 GEPHGVLLKYDPSTNQ----TSLVLDG-LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 128 ~~~~~~v~~~d~~~~~----~~~~~~~-~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
.++|+++..+... .+.+..+ ...|.+|++.||| .|||++.+
T Consensus 282 ---~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG-~lyv~td~ 327 (347)
T 3das_A 282 ---GERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD-KLWLVTSN 327 (347)
T ss_dssp ---TCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT-EEEEEECT
T ss_pred ---CCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC-cEEEEEcC
Confidence 2478777765332 2444443 5678999999999 58998754
No 107
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=1.3e-08 Score=79.60 Aligned_cols=133 Identities=11% Similarity=-0.024 Sum_probs=88.3
Q ss_pred CC-CEEEEcCC-----CeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC----------CCeEEEEcc-CC-
Q 030700 20 NG-VLYTATGD-----GWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS----------QQGLLKVSE-EG- 80 (173)
Q Consensus 20 ~g-~l~~~~~~-----~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~----------~~~i~~~~~-~g- 80 (173)
++ ++|+++.. +.|..+|. ++++....+.+..| |+++++||+.+|+++. .+.+..+|. ++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 54 69998842 68999996 45555544556667 8999999998899984 235777775 44
Q ss_pred -cEEEEeccCCc--cccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc----cc
Q 030700 81 -VTVLVSQFNGS--QLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG----LY 152 (173)
Q Consensus 81 -~~~~~~~~~~~--~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~ 152 (173)
...+....... ....|.+++++|||+ +|+++.. ..+.|..+|+.++++...... ..
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~ 224 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHI 224 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceee
Confidence 33332110000 124799999999995 8988532 236899999988765433221 12
Q ss_pred Ccce----EEEccCCCEEEEEe
Q 030700 153 FANG----VALSEDERFLVVCE 170 (173)
Q Consensus 153 ~p~g----i~~~~dg~~lyv~~ 170 (173)
.|.| +++++||+.+||+.
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEEC
T ss_pred ccCCCcEEEEEcCCCCEEEEEC
Confidence 3445 78888998888764
No 108
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.01 E-value=3.9e-08 Score=78.60 Aligned_cols=137 Identities=14% Similarity=0.128 Sum_probs=91.8
Q ss_pred CCcceEEEcCCCCEEEE-cCCCeEEEEcCCCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEEEE
Q 030700 10 NHPEDVSVDGNGVLYTA-TGDGWIKRMHPNGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~-~~~~~i~~~~~~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~~~ 85 (173)
....++++.|++.++++ ..++.|..|+.+++... +........ .++|++++++|..+.....+...+.++ ...+.
T Consensus 427 ~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~-~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~~ 505 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 505 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEEe
Confidence 34567999998876654 47888999998876544 333445567 999999999955544444454455666 33332
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCE
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERF 165 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~ 165 (173)
. .. ...+.++++|||+++++-. .++.|..+|..+..+..+........+++|+||+++
T Consensus 506 ~-h~----~~v~~l~~s~dg~~l~s~~-----------------~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 506 G-HS----SSVRGVAFSPDGQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp C-CS----SCEEEEEECTTSSCEEEEE-----------------TTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred C-CC----CCEEEEEEcCCCCEEEEEE-----------------CcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 1 11 3567899999998766532 347888888754334444444556689999999997
Q ss_pred EEEE
Q 030700 166 LVVC 169 (173)
Q Consensus 166 lyv~ 169 (173)
|+.+
T Consensus 564 l~s~ 567 (577)
T 2ymu_A 564 IASA 567 (577)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7654
No 109
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.00 E-value=1.2e-08 Score=82.18 Aligned_cols=134 Identities=10% Similarity=-0.014 Sum_probs=94.1
Q ss_pred EEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc--CCcEEEEeccCCc
Q 030700 16 SVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE--EGVTVLVSQFNGS 91 (173)
Q Consensus 16 ~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~--~g~~~~~~~~~~~ 91 (173)
+++|++.+|++. .++.|..+|. ++++......+..++ +++++++|++||+++..+.|..++. ...+.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g- 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG- 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-
Confidence 478888999888 6788999995 566554434344488 9999999999899988776777776 222222222222
Q ss_pred cccCCccEEEcC----CCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc------------ccCc
Q 030700 92 QLRFANDVIEAS----DGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG------------LYFA 154 (173)
Q Consensus 92 ~~~~~~~l~~~~----dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------------~~~p 154 (173)
..|.+++++| ||+ +|+++.. ++.|..+|..++++...... ...+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 4689999999 996 6777531 35788889888765444332 1245
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
.+|+++|+++.+|++.
T Consensus 283 ~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 283 AAIIASHEHPEFIVNV 298 (543)
T ss_dssp EEEEECSSSSEEEEEE
T ss_pred EEEEECCCCCEEEEEE
Confidence 6899999999888875
No 110
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.00 E-value=1.4e-07 Score=68.91 Aligned_cols=148 Identities=15% Similarity=0.166 Sum_probs=96.0
Q ss_pred ecCCccCCcceEEEcCC-CCEEE-EcCCCeEEEEcCCCcEEEecc--ccCccccceEEccCCcEEEEEeCC-CeEEEEc-
Q 030700 4 LGEGIVNHPEDVSVDGN-GVLYT-ATGDGWIKRMHPNGTWEDWHQ--VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVS- 77 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~-g~l~~-~~~~~~i~~~~~~g~~~~~~~--~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~- 77 (173)
-.+|....+.|++++|+ +.||+ .+..+.|+++|++|++....+ ....+. ||++..++++ |+++.. ++++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~-~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQF-VISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEE-EEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEE-EEEECCCCcEEEEEc
Confidence 34565678999999995 57995 558889999999888665433 235789 9999999887 777655 4666555
Q ss_pred -cCC-cEEEEec---c-CCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEc--CCCCeeEEee
Q 030700 78 -EEG-VTVLVSQ---F-NGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD--PSTNQTSLVL 148 (173)
Q Consensus 78 -~~g-~~~~~~~---~-~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d--~~~~~~~~~~ 148 (173)
.++ ...+... . ....-....+|+++|++ ++|++... ....||.++ +.+.......
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~ 162 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISK 162 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeec
Confidence 344 2222211 1 11122346899999987 68988533 123788887 2222233321
Q ss_pred c-------cccCcceEEEccCCCEEEEE
Q 030700 149 D-------GLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 149 ~-------~~~~p~gi~~~~dg~~lyv~ 169 (173)
. ...-+.+++++|....||+.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEE
Confidence 1 13457899999987777774
No 111
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.99 E-value=9.5e-08 Score=70.46 Aligned_cols=135 Identities=13% Similarity=0.124 Sum_probs=93.6
Q ss_pred cceEEEcCCCCEEEEc-C-CCeEEEEcCCCcEEEecc-------ccCccccceEEccCCcEEEEEeCC-CeEEEEccCC-
Q 030700 12 PEDVSVDGNGVLYTAT-G-DGWIKRMHPNGTWEDWHQ-------VGSQSLLGLTTTKENNVIIVCDSQ-QGLLKVSEEG- 80 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~-~-~~~i~~~~~~g~~~~~~~-------~~~~p~~gl~~~~~g~l~~v~~~~-~~i~~~~~~g- 80 (173)
..++.+.++|++++++ . +++++.++++|+...... ....+. +++++++|++ +++... +.++.++++|
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~-~v~~~~~G~~-lv~~~~~~~v~~~d~~G~ 156 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFR-QINKNKKGNY-LVPLFATSEVREIAPNGQ 156 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCS-CCEECTTSCE-EEEETTTTEEEEECTTSC
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCccccccc-CceECCCCCE-EEEecCCCEEEEECCCCC
Confidence 4567888899988877 4 788999999997543211 112467 8889999999 666654 5688888778
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE-Eeec------cccC
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS-LVLD------GLYF 153 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~------~~~~ 153 (173)
...-... . ..|.++...++|++++++.. .++|+.+|+++|++. .+.. .+..
T Consensus 157 ~~w~~~~-~----~~~~~~~~~~~g~~~v~~~~-----------------~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~ 214 (276)
T 3no2_A 157 LLNSVKL-S----GTPFSSAFLDNGDCLVACGD-----------------AHCFVQLNLESNRIVRRVNANDIEGVQLFF 214 (276)
T ss_dssp EEEEEEC-S----SCCCEEEECTTSCEEEECBT-----------------TSEEEEECTTTCCEEEEEEGGGSBSCCCSE
T ss_pred EEEEEEC-C----CCccceeEcCCCCEEEEeCC-----------------CCeEEEEeCcCCcEEEEecCCCCCCccccc
Confidence 3222221 1 35778899999999998532 358999999977642 2221 1345
Q ss_pred cceEEEccCCCEEEEEec
Q 030700 154 ANGVALSEDERFLVVCES 171 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~~~ 171 (173)
|.+++..++|+ +||++.
T Consensus 215 ~~~~~~~~~G~-i~v~~~ 231 (276)
T 3no2_A 215 VAQLFPLQNGG-LYICNW 231 (276)
T ss_dssp EEEEEECTTSC-EEEEEE
T ss_pred cccceEcCCCC-EEEEec
Confidence 78999999987 777763
No 112
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.99 E-value=4.4e-09 Score=84.80 Aligned_cols=141 Identities=11% Similarity=0.132 Sum_probs=90.1
Q ss_pred CcceEEEcCCC-CEEEEcCCC--------------------------------------eEEEEcCC---CcE-EEeccc
Q 030700 11 HPEDVSVDGNG-VLYTATGDG--------------------------------------WIKRMHPN---GTW-EDWHQV 47 (173)
Q Consensus 11 ~p~~l~~~~~g-~l~~~~~~~--------------------------------------~i~~~~~~---g~~-~~~~~~ 47 (173)
.|++++++++| .+|++..+. .|..+|.. ++. ....+.
T Consensus 196 ~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv 275 (595)
T 1fwx_A 196 NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI 275 (595)
T ss_dssp CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE
T ss_pred CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec
Confidence 69999999987 677777221 23344422 222 233455
Q ss_pred cCccccceEEccCCcEEEEEeCCC-eEEEEccCC-c-----------EEEEeccCCccccCCccEEEcCCCcEEEEeCcC
Q 030700 48 GSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSEEG-V-----------TVLVSQFNGSQLRFANDVIEASDGSLYFTVSST 114 (173)
Q Consensus 48 ~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~~g-~-----------~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~ 114 (173)
+..|+ |+.++|||+++|+++... .+..++.+. . ........| ..|.++++++||++|++..-
T Consensus 276 g~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG---~gP~h~aF~~dG~aY~t~~l- 350 (595)
T 1fwx_A 276 ANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG---LGPLHTAFDGRGNAYTSLFL- 350 (595)
T ss_dssp ESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC---SCEEEEEECTTSEEEEEETT-
T ss_pred CCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC---CCcceEEECCCCeEEEEEec-
Confidence 66899 999999999989988764 566666332 1 133333333 58999999999999998542
Q ss_pred CcCcccceeeecccCCCceEEEEcCCC----------Cee-EEeecc-----ccCcceEEEccCCCEEEEEecC
Q 030700 115 KFTPAEYYLDLVSGEPHGVLLKYDPST----------NQT-SLVLDG-----LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~v~~~d~~~----------~~~-~~~~~~-----~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
++.|..||.++ .++ ..+.-+ ...+.|++++|||++||+++-+
T Consensus 351 ----------------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 351 ----------------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp ----------------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred ----------------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 24566666543 111 111111 2233678889999999998754
No 113
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.99 E-value=9.4e-08 Score=71.08 Aligned_cols=132 Identities=13% Similarity=0.214 Sum_probs=82.7
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCCCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccCC-cEEEEeccC
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPNGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG-VTVLVSQFN 89 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g-~~~~~~~~~ 89 (173)
...++++++|.||++. +.|++++.+|+... ......... +++++++|++ |++....+++.++.+| ....... .
T Consensus 179 ~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~-~~~~~~~g~l-~v~t~~~gl~~~~~~g~~~~~~~~-~ 253 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVT-RPAISEDGTI-YVTSLDGHLYAINPDGTEKWRFKT-G 253 (330)
T ss_dssp CSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCS-CCEECTTSCE-EEEETTTEEEEECTTSCEEEEEEC-S
T ss_pred eeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCccee-ceEECCCCeE-EEEcCCCeEEEECCCCCEeEEeeC-C
Confidence 4556777788888877 77888886665432 222223456 7888888888 8877666788887766 2221111 1
Q ss_pred CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEE
Q 030700 90 GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 90 ~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
. ..+..+.++++|++|++.. ++.|+++|+++...............++.+++|+ ||++
T Consensus 254 ~---~~~~~~~~~~~g~l~v~t~------------------~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~-l~~g 311 (330)
T 3hxj_A 254 K---RIESSPVIGNTDTIYFGSY------------------DGHLYAINPDGTEKWNFETGSWIIATPVIDENGT-IYFG 311 (330)
T ss_dssp S---CCCSCCEECTTSCEEEECT------------------TCEEEEECTTSCEEEEEECSSCCCSCCEECTTCC-EEEE
T ss_pred C---CccccceEcCCCeEEEecC------------------CCCEEEECCCCcEEEEEEcCCccccceEEcCCCE-EEEE
Confidence 1 2345577788888998843 3689999985332322222234455677778876 6765
Q ss_pred e
Q 030700 170 E 170 (173)
Q Consensus 170 ~ 170 (173)
.
T Consensus 312 t 312 (330)
T 3hxj_A 312 T 312 (330)
T ss_dssp C
T ss_pred c
Confidence 3
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.99 E-value=4.7e-08 Score=75.98 Aligned_cols=140 Identities=12% Similarity=0.059 Sum_probs=92.1
Q ss_pred CCcceEEEcCCCC-EEEEcCC---CeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC---CeEEEEcc-CC
Q 030700 10 NHPEDVSVDGNGV-LYTATGD---GWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ---QGLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~~---~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~---~~i~~~~~-~g 80 (173)
....+++|+|+|. |+++..+ ..|+.++. +|+...+........ .++|+|||+.|+++... ..|+.++. .+
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 3467799999985 4444433 48999996 566655544455667 99999999865644332 24777775 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVA 158 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~ 158 (173)
...+... . .....++++|||+ ++++... .....|+.+|..+++...+.........++
T Consensus 258 ~~~~l~~~-~----~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 258 QIRQVTDG-R----SNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDAD 317 (415)
T ss_dssp CEEECCCC-S----SCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEE
T ss_pred CEEeCcCC-C----CcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeE
Confidence 4333211 1 2456789999997 5555321 112389999998887665544444556899
Q ss_pred EccCCCEEEEEe
Q 030700 159 LSEDERFLVVCE 170 (173)
Q Consensus 159 ~~~dg~~lyv~~ 170 (173)
|+|||++|+++.
T Consensus 318 ~spdG~~l~~~~ 329 (415)
T 2hqs_A 318 VSSDGKFMVMVS 329 (415)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEE
Confidence 999999888764
No 115
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.98 E-value=1.3e-08 Score=78.29 Aligned_cols=64 Identities=5% Similarity=-0.105 Sum_probs=46.5
Q ss_pred eecCCccCCcceEEEcCCC-CEEEEcC----------CCeEEEEcC-CCcEEEecccc--------CccccceEEccCCc
Q 030700 3 KLGEGIVNHPEDVSVDGNG-VLYTATG----------DGWIKRMHP-NGTWEDWHQVG--------SQSLLGLTTTKENN 62 (173)
Q Consensus 3 ~~~~~~~~~p~~l~~~~~g-~l~~~~~----------~~~i~~~~~-~g~~~~~~~~~--------~~p~~gl~~~~~g~ 62 (173)
++..| ..| +++++|+| .+|+++. ++.|..+|+ +++.......+ ..|. ++++++||+
T Consensus 61 ~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~SpDGk 136 (368)
T 1mda_H 61 HSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCASSA 136 (368)
T ss_dssp EEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECTTSS
T ss_pred EEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcCCCC
Confidence 34445 347 99999987 7999872 467999995 45554433222 4699 999999998
Q ss_pred EEEEEeCC
Q 030700 63 VIIVCDSQ 70 (173)
Q Consensus 63 l~~v~~~~ 70 (173)
.+||++..
T Consensus 137 ~lyVan~~ 144 (368)
T 1mda_H 137 CLLFFLFG 144 (368)
T ss_dssp CEEEEECS
T ss_pred EEEEEccC
Confidence 88999864
No 116
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.98 E-value=1.4e-07 Score=69.86 Aligned_cols=138 Identities=12% Similarity=0.081 Sum_probs=95.3
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-cEEEE
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G-VTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g-~~~~~ 85 (173)
....+++++|++..+ ++..++.|..|+.. ++............ .+++++++++++++.....+..++.. + ...+.
T Consensus 184 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~ 262 (337)
T 1gxr_A 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF-SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLH 262 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECTTSSEEEEEETTSCEEEEETTSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceE-EEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEc
Confidence 457789999988655 55588999999954 44443334455667 99999999996666555556666643 3 32221
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCE
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERF 165 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~ 165 (173)
.. ...+..++++|+|+++++.. .++.|..++..+++..........+..++|+|+++.
T Consensus 263 -~~----~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 320 (337)
T 1gxr_A 263 -LH----ESCVLSLKFAYCGKWFVSTG-----------------KDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKY 320 (337)
T ss_dssp -CC----SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCE
T ss_pred -CC----ccceeEEEECCCCCEEEEec-----------------CCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCE
Confidence 11 13568899999998766532 347899999887766544444566788999999998
Q ss_pred EEEEe
Q 030700 166 LVVCE 170 (173)
Q Consensus 166 lyv~~ 170 (173)
|+++.
T Consensus 321 l~~~~ 325 (337)
T 1gxr_A 321 IVTGS 325 (337)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87764
No 117
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=1e-07 Score=70.94 Aligned_cols=133 Identities=13% Similarity=0.216 Sum_probs=82.4
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCCCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccCCcEEEEeccCC
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPNGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEGVTVLVSQFNG 90 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g~~~~~~~~~~ 90 (173)
...++.+++|.+|++..++.|++++++|+... ......... .+.++++|++ |++. .+++.++.+|..........
T Consensus 139 ~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~d~~g~l-~v~t--~~l~~~d~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 139 YATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAITS-AASIGKDGTI-YFGS--DKVYAINPDGTEKWNFYAGY 214 (330)
T ss_dssp CSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTCCE-EEES--SSEEEECTTSCEEEEECCSS
T ss_pred eeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCcee-eeEEcCCCEE-EEEe--CEEEEECCCCcEEEEEccCC
Confidence 34567777888888887788888887765432 222233445 6778888887 7776 67888886662222211111
Q ss_pred ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEEe
Q 030700 91 SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 91 ~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.....++++++|++|++.. ++.|+++++++............+..++++++++ ||++.
T Consensus 215 ---~~~~~~~~~~~g~l~v~t~------------------~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t 272 (330)
T 3hxj_A 215 ---WTVTRPAISEDGTIYVTSL------------------DGHLYAINPDGTEKWRFKTGKRIESSPVIGNTDT-IYFGS 272 (330)
T ss_dssp ---CCCSCCEECTTSCEEEEET------------------TTEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEEC
T ss_pred ---cceeceEECCCCeEEEEcC------------------CCeEEEECCCCCEeEEeeCCCCccccceEcCCCe-EEEec
Confidence 3567788888888988753 2578888876444433333333344566665664 66653
No 118
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.96 E-value=9.7e-08 Score=76.27 Aligned_cols=138 Identities=15% Similarity=0.175 Sum_probs=92.7
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcCCCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEEEE
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHPNGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~~~ 85 (173)
....+++++|+|..++ +..++.|..|+.+++... +........ +++|+++++++..+.....+...+.++ ...+.
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~ 464 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVW-GVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLT 464 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEc
Confidence 4467899999986554 457888999998777543 333344566 899999999855554444455555666 33332
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCE
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERF 165 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~ 165 (173)
. .. .....++++|||+++++-. .++.|..+|..+..+..+.......+.|+|+||+++
T Consensus 465 ~-~~----~~v~~~~~spd~~~las~~-----------------~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 522 (577)
T 2ymu_A 465 G-HS----SSVRGVAFSPDGQTIASAS-----------------DDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 522 (577)
T ss_dssp C-CS----SCEEEEEECTTSCEEEEEE-----------------TTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred C-CC----CCEEEEEEcCCCCEEEEEe-----------------CCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCE
Confidence 1 11 3467899999998777632 346888888764444444444556689999999998
Q ss_pred EEEEe
Q 030700 166 LVVCE 170 (173)
Q Consensus 166 lyv~~ 170 (173)
|+.+.
T Consensus 523 l~s~~ 527 (577)
T 2ymu_A 523 IASAS 527 (577)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 119
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=9.2e-08 Score=69.29 Aligned_cols=139 Identities=11% Similarity=0.060 Sum_probs=92.4
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC--CcEEEecccc--CccccceEEccCCcEEEEEeC----CCeEEEEccCC-
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN--GTWEDWHQVG--SQSLLGLTTTKENNVIIVCDS----QQGLLKVSEEG- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~--g~~~~~~~~~--~~p~~gl~~~~~g~l~~v~~~----~~~i~~~~~~g- 80 (173)
....+++++|+|..++...++.|+.++.+ ++...+.... .... .++++++|+.++++.. ...++.++.++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 35778999999976655557899999964 4444443222 4566 8999999998666652 23577777543
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVA 158 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~ 158 (173)
...+.. . .....++++|||+ ++++... ...-.|+.++..+++...+......+..++
T Consensus 121 ~~~~~~~---~---~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 121 TPRLMTK---N---LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPD 179 (297)
T ss_dssp CCEECCS---S---SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEE
T ss_pred ceEEeec---C---CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccce
Confidence 333321 1 1356789999997 4544321 011378888888777766665556678899
Q ss_pred EccCCCEEEEEe
Q 030700 159 LSEDERFLVVCE 170 (173)
Q Consensus 159 ~~~dg~~lyv~~ 170 (173)
|+|+++.|+++.
T Consensus 180 ~s~dg~~l~~~~ 191 (297)
T 2ojh_A 180 YSPDGRWIYFNS 191 (297)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 999999887753
No 120
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.93 E-value=1e-07 Score=74.01 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=91.4
Q ss_pred CcceEEEcCCCC-EEEEc-C--CCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCC---eEEEEccC-C-
Q 030700 11 HPEDVSVDGNGV-LYTAT-G--DGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ---GLLKVSEE-G- 80 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~--~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~---~i~~~~~~-g- 80 (173)
...+++|+|+|. |+++. . ...|+.++. +++...+........ .++|++||+.++++.... .++.++.+ +
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNT-EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCccc-ceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 457899999996 55443 3 345999996 455655544455567 899999998656554322 57777754 4
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcE-EEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSL-YFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVAL 159 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~-~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~ 159 (173)
...+.. .+ .....++++|||+. +++... .....|+.+|.++++...+.... ....++|
T Consensus 303 ~~~l~~--~~---~~~~~~~~spdG~~l~~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~ 361 (415)
T 2hqs_A 303 PQRITW--EG---SQNQDADVSSDGKFMVMVSSN---------------GGQQHIAKQDLATGGVQVLSSTF-LDETPSL 361 (415)
T ss_dssp CEECCC--SS---SEEEEEEECTTSSEEEEEEEC---------------SSCEEEEEEETTTCCEEECCCSS-SCEEEEE
T ss_pred EEEEec--CC---CcccCeEECCCCCEEEEEECc---------------CCceEEEEEECCCCCEEEecCCC-CcCCeEE
Confidence 433321 11 24567899999974 444211 12358999999988776555443 6788999
Q ss_pred ccCCCEEEEEe
Q 030700 160 SEDERFLVVCE 170 (173)
Q Consensus 160 ~~dg~~lyv~~ 170 (173)
+|||+.|+++.
T Consensus 362 spdg~~l~~~s 372 (415)
T 2hqs_A 362 APNGTMVIYSS 372 (415)
T ss_dssp CTTSSEEEEEE
T ss_pred cCCCCEEEEEE
Confidence 99999887754
No 121
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.89 E-value=3.7e-07 Score=68.40 Aligned_cols=135 Identities=14% Similarity=0.127 Sum_probs=89.3
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCe-EEEEcc-CC--cEE
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQG-LLKVSE-EG--VTV 83 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~-i~~~~~-~g--~~~ 83 (173)
...+++++|+|.++++. .++.|..||. +++... +........ .++|++++++ +++...++ +...+. .+ ...
T Consensus 166 ~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~spd~~~-l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 166 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIR-SLTFSPDSQL-LVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCC-EEEECTTSCE-EEEECTTSCEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCcee-EEEEcCCCCE-EEEEcCCCeEEEEECCCcceeEE
Confidence 45689999999766544 8889999995 455433 323334456 9999999998 44444444 444453 34 222
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~d 162 (173)
+. ... .....++++|+|.++++.. .++.|..+|..+++......+ .....+++|+|+
T Consensus 244 ~~-~h~----~~v~~~~~sp~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 244 LS-GHA----SWVLNVAFCPDDTHFVSSS-----------------SDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGN 301 (321)
T ss_dssp EC-CCS----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred Ec-CCC----CceEEEEECCCCCEEEEEe-----------------CCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCC
Confidence 21 111 3467899999998777632 347889999887765444433 455678999999
Q ss_pred CCEEEEE
Q 030700 163 ERFLVVC 169 (173)
Q Consensus 163 g~~lyv~ 169 (173)
++.|+.+
T Consensus 302 g~~l~s~ 308 (321)
T 3ow8_A 302 GSKIVSV 308 (321)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9977654
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.89 E-value=7.5e-07 Score=66.68 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=90.6
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
.....+++.|+|..+++. .++.|..|+. +++.. .+........ .++++++|++|+.+.....+..++. ++ ...
T Consensus 123 ~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~-~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL-SIAYSPDGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE-EEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 345679999998766544 7888988885 34433 3333344566 8999999999555544444555553 45 222
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~d 162 (173)
+. ... .....++++|+|.++++-. .++.|..+|..+++......+ ......++|+|+
T Consensus 202 ~~-~h~----~~v~~l~~spd~~~l~s~s-----------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 202 LE-GHA----MPIRSLTFSPDSQLLVTAS-----------------DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 259 (321)
T ss_dssp EC-CCS----SCCCEEEECTTSCEEEEEC-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred Ec-ccC----CceeEEEEcCCCCEEEEEc-----------------CCCeEEEEECCCcceeEEEcCCCCceEEEEECCC
Confidence 21 111 2468899999998777632 347888899877665444443 445678999999
Q ss_pred CCEEEEEe
Q 030700 163 ERFLVVCE 170 (173)
Q Consensus 163 g~~lyv~~ 170 (173)
+++|+.+.
T Consensus 260 ~~~l~s~s 267 (321)
T 3ow8_A 260 DTHFVSSS 267 (321)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEe
Confidence 99877653
No 123
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.86 E-value=6.6e-07 Score=66.18 Aligned_cols=138 Identities=12% Similarity=0.062 Sum_probs=92.6
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCCC-c--EE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--c
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPNG-T--WE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--V 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~g-~--~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~ 81 (173)
....+++++|++.++ ++..++.|..|+... + .. .+........ .+++++++++++++.....+..++. .+ .
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLV 176 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCcee
Confidence 446789999988655 555788999998643 3 12 2223344566 8999999998566655555666664 44 2
Q ss_pred EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEcc
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~ 161 (173)
..+ ... ......++++|+|..+++.. .++.|..+|..+++.............++|+|
T Consensus 177 ~~~-~~~----~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~ 234 (337)
T 1gxr_A 177 RQF-QGH----TDGASCIDISNDGTKLWTGG-----------------LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP 234 (337)
T ss_dssp EEE-CCC----SSCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCEEEEEECT
T ss_pred eee-ecc----cCceEEEEECCCCCEEEEEe-----------------cCCcEEEEECCCCceEeeecCCCceEEEEECC
Confidence 222 111 13567899999997666521 34789999998777655554455668899999
Q ss_pred CCCEEEEEe
Q 030700 162 DERFLVVCE 170 (173)
Q Consensus 162 dg~~lyv~~ 170 (173)
+++.++++.
T Consensus 235 ~~~~l~~~~ 243 (337)
T 1gxr_A 235 TGEWLAVGM 243 (337)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEc
Confidence 999888764
No 124
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=98.85 E-value=3.2e-08 Score=80.14 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=54.1
Q ss_pred ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc--cCcceEEEccCCCEEEE
Q 030700 91 SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL--YFANGVALSEDERFLVV 168 (173)
Q Consensus 91 ~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~p~gi~~~~dg~~lyv 168 (173)
..+..|+.|+++++|+|||++......... ......+.++.+++.++++..++.+. ....|++|+||+++|||
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~-----~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGD-----FAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGG-----GTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCccCCcceEECCCCCEEEEecCCCccccc-----ccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 347899999999999999976432111110 11223468899999999988887653 45579999999999999
Q ss_pred E
Q 030700 169 C 169 (173)
Q Consensus 169 ~ 169 (173)
+
T Consensus 548 n 548 (592)
T 3zwu_A 548 G 548 (592)
T ss_dssp E
T ss_pred E
Confidence 6
No 125
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=1.5e-07 Score=68.74 Aligned_cols=129 Identities=15% Similarity=0.099 Sum_probs=80.8
Q ss_pred CCcceEEEcCCCCEEEEc-CC--CeEEEEcC-CCcEEEeccccCc--cccceEEccCCcEEEEEeCCC-eEEEEcc-CC-
Q 030700 10 NHPEDVSVDGNGVLYTAT-GD--GWIKRMHP-NGTWEDWHQVGSQ--SLLGLTTTKENNVIIVCDSQQ-GLLKVSE-EG- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~--~~i~~~~~-~g~~~~~~~~~~~--p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~g- 80 (173)
..-.||.++ ++.||++. .. ..|.++|+ +|++......... .. |++++.+ ++ |++.+.. .++.+|. +.
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~Fge-Git~~g~-~l-y~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGE-GISDWKD-KI-VGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEE-EEEEETT-EE-EEEESSSSEEEEEETTTCC
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcccee-EEEEeCC-EE-EEEEeeCCEEEEEECccCc
Confidence 444899998 78999887 33 37999995 6776544333333 35 6666433 55 9988764 5676775 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec------ccc
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD------GLY 152 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------~~~ 152 (173)
...+.-. +.+..+.+|| .+|+++.+ ++|+.+||++.++..-.. .+.
T Consensus 119 ~~~ti~~~--------~eG~glt~dg~~L~~SdGs------------------~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 119 QVRSFNYD--------GEGWGLTHNDQYLIMSDGT------------------PVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp EEEEEECS--------SCCCCEEECSSCEEECCSS------------------SEEEEECTTTCSEEEEEECEETTEECC
T ss_pred EEEEEECC--------CCceEEecCCCEEEEECCC------------------CeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 3343321 1333444555 68888632 689999999865433321 235
Q ss_pred CcceEEEccCCCEEEEEe
Q 030700 153 FANGVALSEDERFLVVCE 170 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~~ 170 (173)
.+|.+.+. +| .||++.
T Consensus 173 ~lNELe~~-~G-~lyan~ 188 (262)
T 3nol_A 173 ELNELEWV-DG-EIFANV 188 (262)
T ss_dssp CEEEEEEE-TT-EEEEEE
T ss_pred ccceeEEE-CC-EEEEEE
Confidence 67788886 66 588764
No 126
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.84 E-value=1.6e-07 Score=76.10 Aligned_cols=131 Identities=9% Similarity=-0.054 Sum_probs=89.6
Q ss_pred cCCCCEEEEc-CCCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-cEEEEeccCCccc
Q 030700 18 DGNGVLYTAT-GDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G-VTVLVSQFNGSQL 93 (173)
Q Consensus 18 ~~~g~l~~~~-~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g-~~~~~~~~~~~~~ 93 (173)
|+++.+|++. .++.|..+|.+ +++......+..|+ ++++++||+++|+++....+..+|.. . .+.+.....+
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--- 239 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--- 239 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC---
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC---
Confidence 3455788887 67899999964 56655456667899 99999999998999876678888863 2 2222332223
Q ss_pred cCCccEEEc----CCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc------------ccCcce
Q 030700 94 RFANDVIEA----SDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG------------LYFANG 156 (173)
Q Consensus 94 ~~~~~l~~~----~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------------~~~p~g 156 (173)
..|.+++++ |||+ +|+++.. .+.+..+|..+.++...... ...+.+
T Consensus 240 ~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~ 302 (567)
T 1qks_A 240 SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA 302 (567)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE
T ss_pred CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEE
Confidence 368999999 6996 7887532 26788889887765433221 113357
Q ss_pred EEEccCCCEEEEE
Q 030700 157 VALSEDERFLVVC 169 (173)
Q Consensus 157 i~~~~dg~~lyv~ 169 (173)
|..++++..++++
T Consensus 303 i~~s~~~~~~vv~ 315 (567)
T 1qks_A 303 ILASHYRPEFIVN 315 (567)
T ss_dssp EEECSSSSEEEEE
T ss_pred EEEcCCCCEEEEE
Confidence 7888877666655
No 127
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.84 E-value=3.7e-07 Score=69.59 Aligned_cols=140 Identities=13% Similarity=0.138 Sum_probs=87.2
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEc-CCCcEEEe--c-cccCccccceEEccCCcEEEEEeCCC----eEEEEcc-CC-
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMH-PNGTWEDW--H-QVGSQSLLGLTTTKENNVIIVCDSQQ----GLLKVSE-EG- 80 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~-~~g~~~~~--~-~~~~~p~~gl~~~~~g~l~~v~~~~~----~i~~~~~-~g- 80 (173)
...+|+|.|+|.++++..++.+.+++ .+++.... . ....... .++|++++++++.+.... .+..++. .+
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 36789999999888776666777776 45654321 1 1233456 899999998855543322 1333332 33
Q ss_pred cEEEE-eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE-eecc-ccCcceE
Q 030700 81 VTVLV-SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL-VLDG-LYFANGV 157 (173)
Q Consensus 81 ~~~~~-~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~-~~~p~gi 157 (173)
..... ....+. ......++++|||+++++- ..++.|..+|..++++.. +..+ ....+.+
T Consensus 257 ~~~~~~~~~~~~-~~~V~~~~~Spdg~~lasg-----------------s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 257 TSVLRSKQVTNR-FKGITSMDVDMKGELAVLA-----------------SNDNSIALVKLKDLSMSKIFKQAHSFAITEV 318 (365)
T ss_dssp EEEEEEEEEESS-CSCEEEEEECTTSCEEEEE-----------------ETTSCEEEEETTTTEEEEEETTSSSSCEEEE
T ss_pred ecceeeeeecCC-CCCeEeEEECCCCCceEEE-----------------cCCCEEEEEECCCCcEEEEecCcccCCEEEE
Confidence 21111 111111 1346789999999977762 245789999998887544 3343 4556899
Q ss_pred EEccCCCEEEEE
Q 030700 158 ALSEDERFLVVC 169 (173)
Q Consensus 158 ~~~~dg~~lyv~ 169 (173)
+|+|||++|.-+
T Consensus 319 ~fSpdg~~laS~ 330 (365)
T 4h5i_A 319 TISPDSTYVASV 330 (365)
T ss_dssp EECTTSCEEEEE
T ss_pred EECCCCCEEEEE
Confidence 999999977644
No 128
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.82 E-value=2.1e-07 Score=68.05 Aligned_cols=130 Identities=10% Similarity=0.013 Sum_probs=81.4
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEec-cccCccccceEEccCCcEEEEEeCCC-eEEEEcc-CC--c
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWH-QVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE-EG--V 81 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~g--~ 81 (173)
-.+-.||.++ ++.||++. .+++|.++|+ +|++..-. +...... |++++.+ ++ |++.+.. .++.+|. +. .
T Consensus 54 ~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~Fge-Git~~g~-~L-y~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 54 NAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAE-GLASDGE-RL-YQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp TCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEE-EEEECSS-CE-EEEESSSCEEEEEETTTTEEE
T ss_pred ccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCccee-EEEEeCC-EE-EEEEccCCEEEEEECCcCcEE
Confidence 3455799998 57999988 6678999995 56644322 2222345 6777543 66 9988664 4666775 44 3
Q ss_pred EEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec----c--ccCc
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD----G--LYFA 154 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----~--~~~p 154 (173)
..+.- . ...-+++ +|| ++|+++.+ ++|+.+||++.++..-.. + +..+
T Consensus 130 ~ti~~--~----~eGwGLt--~Dg~~L~vSdGs------------------~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 130 RTTRY--S----GEGWGLC--YWNGKLVRSDGG------------------TMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp EEEEC--S----SCCCCEE--EETTEEEEECSS------------------SEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEeC--C----CceeEEe--cCCCEEEEECCC------------------CEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 33321 1 1234555 444 68888633 699999999875443322 2 3466
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
|.|.+. +| .||++.
T Consensus 184 NeLe~~-dG-~lyanv 197 (268)
T 3nok_A 184 NELECA-NG-VIYANI 197 (268)
T ss_dssp EEEEEE-TT-EEEEEE
T ss_pred cccEEe-CC-EEEEEE
Confidence 888887 66 588765
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.82 E-value=1.7e-07 Score=77.24 Aligned_cols=137 Identities=12% Similarity=0.047 Sum_probs=88.4
Q ss_pred CCcceEEEcCCCC-EEEEcC-CC-----eEEEEcC-CCcEEEecccc-------------------------CccccceE
Q 030700 10 NHPEDVSVDGNGV-LYTATG-DG-----WIKRMHP-NGTWEDWHQVG-------------------------SQSLLGLT 56 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~-~~-----~i~~~~~-~g~~~~~~~~~-------------------------~~p~~gl~ 56 (173)
..+..++|+|+|+ |+++.. ++ .|+.++. +|+........ .... .++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeE
Confidence 3577899999996 555554 66 7999996 45544432221 1246 899
Q ss_pred EccCCcEEEEEeCCCeEEEEccCCc---EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCc
Q 030700 57 TTKENNVIIVCDSQQGLLKVSEEGV---TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHG 132 (173)
Q Consensus 57 ~~~~g~l~~v~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~ 132 (173)
|++||+.|+++.. ..++.++.++. .. ...... ...+..++++|||+ +.++. ++
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~-~~l~~~--~~~~~~~~~SPDG~~la~~~-------------------~~ 172 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAV-RQLTHG--EGFATDAKLSPKGGFVSFIR-------------------GR 172 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSC-CBCCCS--SSCEEEEEECTTSSEEEEEE-------------------TT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceE-EEcccC--CcccccccCCCCCCEEEEEe-------------------CC
Confidence 9999998666654 56777774331 11 111111 13467899999998 44442 14
Q ss_pred eEEEEcCCCCeeEEeeccccC-----------------cceEEEccCCCEEEEEe
Q 030700 133 VLLKYDPSTNQTSLVLDGLYF-----------------ANGVALSEDERFLVVCE 170 (173)
Q Consensus 133 ~v~~~d~~~~~~~~~~~~~~~-----------------p~gi~~~~dg~~lyv~~ 170 (173)
.|+.+|.++++...+...... +.+++|||||++|+++.
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 799999988876655443221 47899999999888763
No 130
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.82 E-value=3.6e-08 Score=75.29 Aligned_cols=118 Identities=12% Similarity=0.079 Sum_probs=75.4
Q ss_pred cEEEeccccCccccceEEccCCc-EEEEEeCCCeEEEEccCC-cE-EEEec--cCCccccCCccEEEcC----CCcEEEE
Q 030700 40 TWEDWHQVGSQSLLGLTTTKENN-VIIVCDSQQGLLKVSEEG-VT-VLVSQ--FNGSQLRFANDVIEAS----DGSLYFT 110 (173)
Q Consensus 40 ~~~~~~~~~~~p~~gl~~~~~g~-l~~v~~~~~~i~~~~~~g-~~-~~~~~--~~~~~~~~~~~l~~~~----dG~~~v~ 110 (173)
+++.+......|. +|+++++|+ + ||++....|++++.+| .. .+... ........+++|+++| +|.+|++
T Consensus 9 ~~~~va~~l~~P~-~i~~~pdG~~l-~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 9 NVEVLQDKLDHPW-ALAFLPDNHGM-LITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEEEEESSEE-EEEECSTTCCE-EEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred EEEEEECCCCCcE-EEEEcCCCCEE-EEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 3445555567899 999999999 8 9999877788888777 32 22221 1111124678999999 5889998
Q ss_pred eCcCCcCcccceeeecccCCCceEEEEcCCCC-----eeEEeeccc-------cCcceEEEccCCCEEEEEe
Q 030700 111 VSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-----QTSLVLDGL-------YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~~-------~~p~gi~~~~dg~~lyv~~ 170 (173)
+..... ......+|+|++.+.+ ..+.+...+ ..+++|+|+||| .|||+.
T Consensus 87 ~~~~~~----------~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~ 147 (353)
T 2g8s_A 87 YSEVGD----------DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIAL 147 (353)
T ss_dssp EEEECS----------SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEE
T ss_pred EeCCCC----------CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEE
Confidence 632100 0001247888766432 233333222 346789999999 699985
No 131
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.81 E-value=3.1e-07 Score=71.97 Aligned_cols=147 Identities=11% Similarity=0.079 Sum_probs=88.5
Q ss_pred cCCcceEEEcCCCCEEEEc-CC------CeEEEEcCC-CcEEEecccc----CccccceEEccCCcEEEEEeC-------
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GD------GWIKRMHPN-GTWEDWHQVG----SQSLLGLTTTKENNVIIVCDS------- 69 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~------~~i~~~~~~-g~~~~~~~~~----~~p~~gl~~~~~g~l~~v~~~------- 69 (173)
...|.++...|+| +|++. .+ +.|..+|.. +++....+.. ..+. .+.++++++.+|++++
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccc
Confidence 4579999999999 99876 22 689999964 6655433322 2345 5777999998777753
Q ss_pred ------------CCeEEEEcc-CC--cEEEEeccCCccccCCccEEE--cCCCc-EEEEeCcCCcCcccceeeecccCCC
Q 030700 70 ------------QQGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIE--ASDGS-LYFTVSSTKFTPAEYYLDLVSGEPH 131 (173)
Q Consensus 70 ------------~~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~--~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~ 131 (173)
.+.|..++. ++ ...+. . +.....|.+|.+ +|+|+ +|+++.- .....+
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~-v--g~~g~~P~~i~f~~~Pdg~~aYV~~e~------------~~~~Ls 279 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT-L--GEENRMALELRPLHDPTKLMGFINMVV------------SLKDLS 279 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEE-S--CTTEEEEEEEEECSSTTCCEEEEEEEE------------ETTTCC
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEe-c--CCCCCccceeEeeECCCCCEEEEEEee------------eccCCC
Confidence 356777774 44 22222 1 111246777877 99996 7887530 000122
Q ss_pred ceEEEEcCCCCee--EEee---c-----c-----------ccCcceEEEccCCCEEEEEecC
Q 030700 132 GVLLKYDPSTNQT--SLVL---D-----G-----------LYFANGVALSEDERFLVVCESW 172 (173)
Q Consensus 132 ~~v~~~d~~~~~~--~~~~---~-----~-----------~~~p~gi~~~~dg~~lyv~~~~ 172 (173)
+.|+++..+.++. ..+. . . ...|.+|.+|+|||+|||++.+
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg 341 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWG 341 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETT
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCC
Confidence 4454332222321 1110 0 0 2457899999999999999864
No 132
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.79 E-value=7e-07 Score=67.19 Aligned_cols=141 Identities=11% Similarity=0.010 Sum_probs=90.0
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CCcEEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EGVTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g~~~~~ 85 (173)
....++++.|++.++++. .++.|..||. ++... .+........ .++|+|++++++.+.....+..++. .+.. +.
T Consensus 185 ~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~-~~ 262 (340)
T 1got_B 185 GDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN-AICFFPNGNAFATGSDDATCRLFDLRADQE-LM 262 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEE-EE
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEE-EEEEcCCCCEEEEEcCCCcEEEEECCCCcE-EE
Confidence 346789999999877655 7889999985 45543 3433445567 9999999999444443333444453 3321 11
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCcceEEEccCCC
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFANGVALSEDER 164 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p~gi~~~~dg~ 164 (173)
.............++++|+|.++++- ..++.|..+|..+++...... .......++|+||++
T Consensus 263 ~~~~~~~~~~v~~~~~s~~g~~l~~g-----------------~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~ 325 (340)
T 1got_B 263 TYSHDNIICGITSVSFSKSGRLLLAG-----------------YDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGM 325 (340)
T ss_dssp EECCTTCCSCEEEEEECTTSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEccCCcccceEEEEECCCCCEEEEE-----------------CCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCC
Confidence 11111111245779999999877763 234789999987665443333 345567899999998
Q ss_pred EEEEE
Q 030700 165 FLVVC 169 (173)
Q Consensus 165 ~lyv~ 169 (173)
+|+.+
T Consensus 326 ~l~s~ 330 (340)
T 1got_B 326 AVATG 330 (340)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 77654
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.78 E-value=4.3e-07 Score=65.73 Aligned_cols=139 Identities=16% Similarity=0.116 Sum_probs=86.8
Q ss_pred CCcceEEEcCCCCEE-EEc----CCCeEEEEcCCC-cEEEeccccCccccceEEccCCcEEEEEe-CCC--eEEEEccCC
Q 030700 10 NHPEDVSVDGNGVLY-TAT----GDGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCD-SQQ--GLLKVSEEG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~----~~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~-~~~--~i~~~~~~g 80 (173)
..+.+++|+|+|..+ ++. ....|+.++.++ ....+ ....... .++++++|+.++++. ... .++.++.++
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~-~~~~spdg~~l~~~~~~~~~~~l~~~~~~~ 162 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLM-TKNLPSY-WHGWSPDGKSFTYCGIRDQVFDIYSMDIDS 162 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEEC-CSSSSEE-EEEECTTSSEEEEEEEETTEEEEEEEETTT
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEe-ecCCCcc-ceEECCCCCEEEEEECCCCceEEEEEECCC
Confidence 345679999998644 444 246788888644 43333 2233466 889999998756443 222 355555443
Q ss_pred --cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceE
Q 030700 81 --VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGV 157 (173)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi 157 (173)
...+.. . ...+..++++|+|+ ++++... .....|+.++..++....+.........+
T Consensus 163 ~~~~~~~~-~----~~~~~~~~~s~dg~~l~~~~~~---------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 222 (297)
T 2ojh_A 163 GVETRLTH-G----EGRNDGPDYSPDGRWIYFNSSR---------------TGQMQIWRVRVDGSSVERITDSAYGDWFP 222 (297)
T ss_dssp CCEEECCC-S----SSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCEEECCCCSEEEEEE
T ss_pred CcceEccc-C----CCccccceECCCCCEEEEEecC---------------CCCccEEEECCCCCCcEEEecCCcccCCe
Confidence 332221 1 13567899999997 5555321 12358899987766666555444556679
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+||+++|+++.
T Consensus 223 ~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 223 HPSPSGDKVVFVS 235 (297)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCEEEEEE
Confidence 9999999887753
No 134
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.77 E-value=2.6e-06 Score=62.94 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=91.1
Q ss_pred cCCcceEEEcCCCCEEEE-cCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cE
Q 030700 9 VNHPEDVSVDGNGVLYTA-TGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VT 82 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~-~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~ 82 (173)
-....+++++|+|.++++ ..++.|..|+. +++... +........ .+++++++++++.+.....+...+. .+ ..
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 345678999999876654 48888999985 555543 333344566 9999999998555544444444453 44 33
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEcc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSE 161 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~ 161 (173)
.+.. .. .....++++|++.++++-. .++.|..+|..+++....... ......++|+|
T Consensus 102 ~~~~-~~----~~v~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 159 (312)
T 4ery_A 102 TLKG-HS----NYVFCCNFNPQSNLIVSGS-----------------FDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR 159 (312)
T ss_dssp EEEC-CS----SCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred EEcC-CC----CCEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC
Confidence 3321 11 2457789999998777632 347899999887765444433 34457899999
Q ss_pred CCCEEEEEe
Q 030700 162 DERFLVVCE 170 (173)
Q Consensus 162 dg~~lyv~~ 170 (173)
+++.++.+.
T Consensus 160 ~~~~l~~~~ 168 (312)
T 4ery_A 160 DGSLIVSSS 168 (312)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 999877654
No 135
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.77 E-value=2.7e-07 Score=70.45 Aligned_cols=87 Identities=8% Similarity=-0.037 Sum_probs=61.1
Q ss_pred eEEccCCcEEEEEeC-----------CCeEEEEcc-CCcEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccc
Q 030700 55 LTTTKENNVIIVCDS-----------QQGLLKVSE-EGVTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEY 121 (173)
Q Consensus 55 l~~~~~g~l~~v~~~-----------~~~i~~~~~-~g~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~ 121 (173)
++++++++.+|++.. ...+..+|. ++ +.+....-+ . |.+|+++|||+ +|+++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~-~~v~~i~~~---~-p~~ia~spdg~~l~v~n---------- 323 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK-QRVARIPGR---D-ALSMTIDQQRNLMLTLD---------- 323 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT-EEEEEEECT---T-CCEEEEETTTTEEEEEC----------
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC-cEEEEEecC---C-eeEEEECCCCCEEEEeC----------
Confidence 899999877798764 235777785 44 222222112 2 99999999997 66653
Q ss_pred eeeecccCCCceEEEEcCCCC--eeEEee-ccccCcceEEEccCCCE
Q 030700 122 YLDLVSGEPHGVLLKYDPSTN--QTSLVL-DGLYFANGVALSEDERF 165 (173)
Q Consensus 122 ~~~~~~~~~~~~v~~~d~~~~--~~~~~~-~~~~~p~gi~~~~dg~~ 165 (173)
. +.|..||++++ ++.... .....|++|+++|||++
T Consensus 324 --------~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 324 --------G-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGGT 361 (361)
T ss_dssp --------S-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSCC
T ss_pred --------C-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCCC
Confidence 1 58999999998 654443 44688999999999973
No 136
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.75 E-value=5.7e-07 Score=75.10 Aligned_cols=136 Identities=10% Similarity=0.056 Sum_probs=94.1
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEeccc------cCccccceEEccCCcEEEEEeCCCeEEEEccCC--
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQV------GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG-- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~~------~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g-- 80 (173)
....+++.|++|.||++.. +.|+++++. +++..+... ..... +|+.+++|++ |++..+.++++++++.
T Consensus 450 ~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~-~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVR-SIAQDSEGRF-WIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEE-EEEECTTCCE-EEEESSSCEEEECTTCCE
T ss_pred CeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeE-EEEEcCCCCE-EEEEcCCCEEEEeCCCCe
Confidence 3456788899999999887 679999864 444433221 23466 8899999999 8887767899999754
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceE-EEEcCCCCeeEEeec--cc--cCcc
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVL-LKYDPSTNQTSLVLD--GL--YFAN 155 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v-~~~d~~~~~~~~~~~--~~--~~p~ 155 (173)
.+.+.. ..+.+......|..|++|++|++.. ..+ +++|+++++.+.... ++ ....
T Consensus 527 ~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~T~-------------------~Glv~~~d~~~~~~~~~~~~~gl~~~~i~ 586 (781)
T 3v9f_A 527 VRKFNQ-YEGFCSNTINQIYRSSKGQMWLATG-------------------EGLVCFPSARNFDYQVFQRKEGLPNTHIR 586 (781)
T ss_dssp EEEECT-TTTCSCSCEEEEEECTTSCEEEEET-------------------TEEEEESCTTTCCCEEECGGGTCSCCCCC
T ss_pred EEEccC-CCCCCCCeeEEEEECCCCCEEEEEC-------------------CCceEEECCCCCcEEEccccCCCCCceEE
Confidence 444432 2233334567899999999999853 245 899988776655543 22 2345
Q ss_pred eEEEccCCCEEEEE
Q 030700 156 GVALSEDERFLVVC 169 (173)
Q Consensus 156 gi~~~~dg~~lyv~ 169 (173)
+|+.+++|+ ||++
T Consensus 587 ~i~~d~~g~-lW~~ 599 (781)
T 3v9f_A 587 AISEDKNGN-IWAS 599 (781)
T ss_dssp EEEECSSSC-EEEE
T ss_pred EEEECCCCC-EEEE
Confidence 788888886 6665
No 137
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=1.9e-06 Score=62.29 Aligned_cols=130 Identities=18% Similarity=0.179 Sum_probs=81.0
Q ss_pred cCCcceEEEcCCCCEEEEcC---CCeEEEEcC-CCcEEEeccccCc--cccceEEccCCcEEEEEeCCC-eEEEEccC-C
Q 030700 9 VNHPEDVSVDGNGVLYTATG---DGWIKRMHP-NGTWEDWHQVGSQ--SLLGLTTTKENNVIIVCDSQQ-GLLKVSEE-G 80 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~---~~~i~~~~~-~g~~~~~~~~~~~--p~~gl~~~~~g~l~~v~~~~~-~i~~~~~~-g 80 (173)
-..-.||.+++ +.||++.. ...|.++|+ +|++......... .. |++++. +++ |++.+.. .++.+|.+ .
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fge-Gi~~~~-~~l-y~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGA-GIVAWR-DRL-IQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEE-EEEEET-TEE-EEEESSSSEEEEEETTTT
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCccee-EEEEeC-CEE-EEEEeeCCEEEEEECCcC
Confidence 45677999986 79998873 348999995 6776654443333 45 666643 355 9988664 46667754 3
Q ss_pred --cEEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec----c--c
Q 030700 81 --VTVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD----G--L 151 (173)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----~--~ 151 (173)
...+.-. ..+..+.+|| ++|++|.+ ++|+.+||++.++..... + +
T Consensus 96 ~~~~ti~~~--------~~Gwglt~dg~~L~vSdgs------------------~~l~~iDp~t~~~~~~I~V~~~g~~~ 149 (243)
T 3mbr_X 96 TPRARFRYP--------GEGWALTSDDSHLYMSDGT------------------AVIRKLDPDTLQQVGSIKVTAGGRPL 149 (243)
T ss_dssp EEEEEEECS--------SCCCEEEECSSCEEEECSS------------------SEEEEECTTTCCEEEEEECEETTEEC
T ss_pred cEEEEEeCC--------CCceEEeeCCCEEEEECCC------------------CeEEEEeCCCCeEEEEEEEccCCccc
Confidence 3333211 1233444555 69999743 689999999865433322 1 3
Q ss_pred cCcceEEEccCCCEEEEEe
Q 030700 152 YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~~ 170 (173)
..+|.|.+. +| .||++.
T Consensus 150 ~~lNeLe~~-~G-~lyanv 166 (243)
T 3mbr_X 150 DNLNELEWV-NG-ELLANV 166 (243)
T ss_dssp CCEEEEEEE-TT-EEEEEE
T ss_pred ccceeeEEe-CC-EEEEEE
Confidence 466777775 55 488764
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.74 E-value=9.7e-08 Score=78.48 Aligned_cols=139 Identities=9% Similarity=-0.046 Sum_probs=88.9
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEeccccC----ccccceEEccCCcEEEEEeCC---------CeEEE
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQVGS----QSLLGLTTTKENNVIIVCDSQ---------QGLLK 75 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~----~p~~gl~~~~~g~l~~v~~~~---------~~i~~ 75 (173)
..+..++|.|+|.+++++.++.|+.|+. +|+......... ... .++|+|||+.|+++... ..++.
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 4478899999998665567788999995 455444333222 367 89999999975555332 24556
Q ss_pred Ecc-CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc-
Q 030700 76 VSE-EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL- 151 (173)
Q Consensus 76 ~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~- 151 (173)
++. ++ ...+... .+ ....+..++++|||+ +.++. .+.|+.+|.++++...+....
T Consensus 96 ~d~~~~~~~~l~~~-~~-~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~ 154 (723)
T 1xfd_A 96 SKIPHGDPQSLDPP-EV-SNAKLQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGK 154 (723)
T ss_dssp EESSSCCCEECCCT-TC-CSCCCSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCB
T ss_pred EECCCCceEeccCC-cc-ccccccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCC
Confidence 664 44 4333221 11 112367789999996 44442 147999999887766555431
Q ss_pred c------------------CcceEEEccCCCEEEEEe
Q 030700 152 Y------------------FANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 ~------------------~p~gi~~~~dg~~lyv~~ 170 (173)
. ...+++|||||+.|+++.
T Consensus 155 ~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred CCceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 1 226799999999887753
No 139
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=1e-06 Score=73.63 Aligned_cols=136 Identities=13% Similarity=0.116 Sum_probs=94.2
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCCC-cEEEecccc----CccccceEEccCCcEEEEEeCCCeE-EEEcc-CC-c
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPNG-TWEDWHQVG----SQSLLGLTTTKENNVIIVCDSQQGL-LKVSE-EG-V 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g-~~~~~~~~~----~~p~~gl~~~~~g~l~~v~~~~~~i-~~~~~-~g-~ 81 (173)
....+++.|++|.||++...+.|+++++++ ++..+.... .... +|..+++|++ |++.. .++ .++++ ++ +
T Consensus 495 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~-~i~~d~~g~l-Wi~T~-~Glv~~~d~~~~~~ 571 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTIN-QIYRSSKGQM-WLATG-EGLVCFPSARNFDY 571 (781)
T ss_dssp SCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEE-EEEECTTSCE-EEEET-TEEEEESCTTTCCC
T ss_pred ceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeE-EEEECCCCCE-EEEEC-CCceEEECCCCCcE
Confidence 456789999999999998766799999765 444443221 2346 7888999999 88765 688 77776 44 5
Q ss_pred EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--cccC----cc
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GLYF----AN 155 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~----p~ 155 (173)
..+. ..++.+.....++..|++|++|++.. ..|.+++|++++.+.... ++.. ++
T Consensus 572 ~~~~-~~~gl~~~~i~~i~~d~~g~lW~~t~-------------------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~ 631 (781)
T 3v9f_A 572 QVFQ-RKEGLPNTHIRAISEDKNGNIWASTN-------------------TGISCYITSKKCFYTYDHSNNIPQGSFISG 631 (781)
T ss_dssp EEEC-GGGTCSCCCCCEEEECSSSCEEEECS-------------------SCEEEEETTTTEEEEECGGGTCCSSCEEEE
T ss_pred EEcc-ccCCCCCceEEEEEECCCCCEEEEcC-------------------CceEEEECCCCceEEecccCCccccccccC
Confidence 5543 33444445678899999999999842 368999998777766543 2221 24
Q ss_pred eEEEccCCCEEEEE
Q 030700 156 GVALSEDERFLVVC 169 (173)
Q Consensus 156 gi~~~~dg~~lyv~ 169 (173)
.++.+++|+ ||+.
T Consensus 632 ~~~~~~~G~-l~~g 644 (781)
T 3v9f_A 632 CVTKDHNGL-IYFG 644 (781)
T ss_dssp EEEECTTSC-EEEE
T ss_pred ceEECCCCE-EEEE
Confidence 577788887 5654
No 140
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.73 E-value=2.1e-06 Score=65.78 Aligned_cols=143 Identities=13% Similarity=0.069 Sum_probs=91.9
Q ss_pred CCcceEEEcCCC-CEEEE-cCCCeEEEEcC-CCcEE-Ee--ccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--
Q 030700 10 NHPEDVSVDGNG-VLYTA-TGDGWIKRMHP-NGTWE-DW--HQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~-~~~~~i~~~~~-~g~~~-~~--~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-- 80 (173)
....++++.|++ .++++ ..++.|..||. +++.. .+ ........ .+++++++++++++.....+..++. .+
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 456789999987 56654 48899999995 44443 33 23445567 9999999988565554545555564 45
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee--EEe-eccccCcceE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT--SLV-LDGLYFANGV 157 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~-~~~~~~p~gi 157 (173)
...+.....+ ..+..++++|+|.++++-.. ...++.|..+|..+++. ... .........+
T Consensus 211 ~~~~~~~~~~---~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 211 VAEKDRPHEG---TRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEECSSCS---SSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred eeeeccCCCC---CcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 2222122111 24688999999987766311 12457899999876542 111 2334556789
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|+++.|+++-
T Consensus 274 ~~s~~~~~l~~~g 286 (402)
T 2aq5_A 274 FFDPDTNIVYLCG 286 (402)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 9999999998764
No 141
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.73 E-value=1.1e-06 Score=73.60 Aligned_cols=133 Identities=12% Similarity=0.136 Sum_probs=91.5
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCCC-cEEEec---c----ccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPNG-TWEDWH---Q----VGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G- 80 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~g-~~~~~~---~----~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g- 80 (173)
...+++.|++|.||++.. +.|++++++. +. .+. . ...... +|..|++|++ |++... ++.++++. +
T Consensus 499 ~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~-~i~~d~~g~l-WigT~~-Gl~~~d~~~~~ 573 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI-QKASILPVSNVTKLFTN-CIYEASNGII-WVGTRE-GFYCFNEKDKQ 573 (795)
T ss_dssp CEEEEEECTTCCEEEEES-SCEEEEEEETTEE-EECCCSCSCGGGGSCEE-EEEECTTSCE-EEEESS-CEEEEETTTTE
T ss_pred eEEEEEECCCCCEEEEeC-CceEEEeCCCCeE-EEecCCCCCCCCCCeeE-EEEECCCCCE-EEEeCC-CceeECCCCCc
Confidence 456788999999999887 6799998644 44 322 1 112356 7888999999 887665 89999964 4
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--cccC----c
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GLYF----A 154 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~----p 154 (173)
++.+ ...++.+......+..|++|++|++.. +.|.++++++++.+.... ++.. .
T Consensus 574 ~~~~-~~~~gl~~~~i~~i~~d~~g~lWi~t~-------------------~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~ 633 (795)
T 4a2l_A 574 IKRY-NTTNGLPNNVVYGILEDSFGRLWLSTN-------------------RGISCFNPETEKFRNFTESDGLQSNQFNT 633 (795)
T ss_dssp EEEE-CGGGTCSCSCEEEEEECTTSCEEEEET-------------------TEEEEEETTTTEEEEECGGGTCSCSCEEE
T ss_pred EEEe-CCCCCCchhheEEEEECCCCCEEEEcC-------------------CceEEEcCCCCcEEEcCCcCCCccccCcc
Confidence 5544 233444444567799999999999852 478999998877765543 2221 2
Q ss_pred ceEEEccCCCEEEEE
Q 030700 155 NGVALSEDERFLVVC 169 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~ 169 (173)
++++.+++|+ ||++
T Consensus 634 ~~~~~~~~G~-l~~g 647 (795)
T 4a2l_A 634 ASYCRTSVGQ-MYFG 647 (795)
T ss_dssp EEEEECTTSC-EEEE
T ss_pred CceeECCCCe-EEEe
Confidence 4677788886 6654
No 142
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.73 E-value=1.1e-06 Score=67.55 Aligned_cols=111 Identities=5% Similarity=-0.071 Sum_probs=70.2
Q ss_pred EcCCC-CEEEEcC-C-C---eEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC----------CCeEEEEcc-
Q 030700 17 VDGNG-VLYTATG-D-G---WIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS----------QQGLLKVSE- 78 (173)
Q Consensus 17 ~~~~g-~l~~~~~-~-~---~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~----------~~~i~~~~~- 78 (173)
..+++ .+|+++. . . .|+.+|. +++.....+.+..| ++++++||+.+|+++. .+.+..+|.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 33565 6898884 3 2 7789986 45554433444444 8999999999999974 234667775
Q ss_pred CC--cEEEEeccCCcc--ccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 79 EG--VTVLVSQFNGSQ--LRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~--~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
+. ...+........ ...|.+++++|||+ +|+++.. .++.|..+| +++++..
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~viD-~t~~~~~ 161 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVGLVV-QGGSSDD 161 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEEEEE-CCCCEEe
Confidence 33 232221101111 24689999999996 7888532 235799999 8876543
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.73 E-value=1.3e-06 Score=71.77 Aligned_cols=145 Identities=10% Similarity=0.058 Sum_probs=86.6
Q ss_pred CcceEEEcCCCC-EEEEc---------------------------------CCCeEEEEcCCC-cEEEecc---ccCccc
Q 030700 11 HPEDVSVDGNGV-LYTAT---------------------------------GDGWIKRMHPNG-TWEDWHQ---VGSQSL 52 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~---------------------------------~~~~i~~~~~~g-~~~~~~~---~~~~p~ 52 (173)
.+.+++|+|+|+ |+++. .+..|+.++.++ +...+.. ....+.
T Consensus 182 ~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 261 (706)
T 2z3z_A 182 IEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261 (706)
T ss_dssp CCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEE
T ss_pred CCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEe
Confidence 358999999985 55543 235688888654 4333321 123456
Q ss_pred cceEEccCCcEEEEEeCCC-----eEEEEcc-CC--cEEEEeccCCccccCCccEEEcC--CCcEEEEeCcCCcCcccce
Q 030700 53 LGLTTTKENNVIIVCDSQQ-----GLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEAS--DGSLYFTVSSTKFTPAEYY 122 (173)
Q Consensus 53 ~gl~~~~~g~l~~v~~~~~-----~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~--dG~~~v~~~~~~~~~~~~~ 122 (173)
.++|++||+.++++.... .++.++. +| ...+............+.++++| ||+++++...
T Consensus 262 -~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~--------- 331 (706)
T 2z3z_A 262 -NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRR--------- 331 (706)
T ss_dssp -EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECT---------
T ss_pred -eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEcc---------
Confidence 899999999756643221 4666774 44 23332211111111246789999 9986554322
Q ss_pred eeecccCCCceEEEEcCCCCeeEEeeccccCcce-EEEccCCCEEEEEec
Q 030700 123 LDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANG-VALSEDERFLVVCES 171 (173)
Q Consensus 123 ~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~g-i~~~~dg~~lyv~~~ 171 (173)
.....|+.++.+++..+.+..+...... ++|+||++.||++..
T Consensus 332 ------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~ 375 (706)
T 2z3z_A 332 ------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST 375 (706)
T ss_dssp ------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES
T ss_pred ------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec
Confidence 1225899999765666555443333334 799999999988643
No 144
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.72 E-value=7.7e-07 Score=71.88 Aligned_cols=148 Identities=10% Similarity=0.087 Sum_probs=89.8
Q ss_pred CC-CEEEEc-CCCeEEEEcCCC-cEEEe--ccccCccccceEE-c-cCCcEEEEEeC-----------------CC-eEE
Q 030700 20 NG-VLYTAT-GDGWIKRMHPNG-TWEDW--HQVGSQSLLGLTT-T-KENNVIIVCDS-----------------QQ-GLL 74 (173)
Q Consensus 20 ~g-~l~~~~-~~~~i~~~~~~g-~~~~~--~~~~~~p~~gl~~-~-~~g~l~~v~~~-----------------~~-~i~ 74 (173)
+| .||+++ .+.+|.++|.+. +...+ .+.+..|+ |+++ . |+++++|++.. +. .+-
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 66 699988 678899999765 44442 23356799 9998 4 88888777742 11 234
Q ss_pred EEccCCcEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcc---------cce--------eeecccC---CCce
Q 030700 75 KVSEEGVTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPA---------EYY--------LDLVSGE---PHGV 133 (173)
Q Consensus 75 ~~~~~g~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~---------~~~--------~~~~~~~---~~~~ 133 (173)
.+|.+..+......-+ ..|++++++|+|+ +|+++.....+.. .+. ...+... .-+.
T Consensus 179 vID~~t~~v~~qI~Vg---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEETTTTEEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEECCCCeEEEEEEeC---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 4454332222222111 2689999999996 7888754322110 000 0000000 0145
Q ss_pred EEEEcCCC--Cee-EEeeccccCcceEEEccCCCEEEEEec
Q 030700 134 LLKYDPST--NQT-SLVLDGLYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 134 v~~~d~~~--~~~-~~~~~~~~~p~gi~~~~dg~~lyv~~~ 171 (173)
|..+|..+ ++. .........|.|+.++|||+++||++-
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~ 296 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGK 296 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECT
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCC
Confidence 88999886 433 333444578999999999999999874
No 145
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.71 E-value=2.4e-07 Score=73.04 Aligned_cols=123 Identities=9% Similarity=0.054 Sum_probs=75.5
Q ss_pred cEEEeccccCccccceEEccCCcEEEEEeCCC-eEEEEcc-CC-cEEEEeccCCc----cccCCccEEEcC----CCcEE
Q 030700 40 TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE-EG-VTVLVSQFNGS----QLRFANDVIEAS----DGSLY 108 (173)
Q Consensus 40 ~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~g-~~~~~~~~~~~----~~~~~~~l~~~~----dG~~~ 108 (173)
+++.+......|. +|+++++|++ ||++... .|++++. +| .+.+....... ....+.+|+++| +|.||
T Consensus 18 ~~~~~a~~l~~P~-~~a~~pdG~l-~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSNLNKPH-ALLWGPDNQI-WLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIY 95 (454)
T ss_dssp CEEEEECCCSSEE-EEEECTTSCE-EEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEE
T ss_pred EEEEEECCCCCce-EEEEcCCCcE-EEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEE
Confidence 3445555567899 9999999998 9998775 5888886 56 55544322110 124567999999 67899
Q ss_pred EEeCcCCcCcccceeeecccCCCceEEEEcCCCC-----eeEEeecc-----ccCcceEEEccCCCEEEEEe
Q 030700 109 FTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-----QTSLVLDG-----LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 109 v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-----~~~~~~~~-----~~~p~gi~~~~dg~~lyv~~ 170 (173)
++.......... .......+|+|++.+.+ ..+.+... ...+++|+|+|||+ |||+.
T Consensus 96 v~~s~~~~~~~~-----~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~ 161 (454)
T 1cru_A 96 ISGTFKNPKSTD-----KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTI 161 (454)
T ss_dssp EEEEEECTTC-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEE
T ss_pred EEEeccccCCCc-----cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEE
Confidence 986320000000 00001247888875421 22333321 34578999999996 99984
No 146
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.71 E-value=3e-06 Score=63.87 Aligned_cols=142 Identities=12% Similarity=0.074 Sum_probs=85.3
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcE---EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTW---EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VT 82 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~---~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~ 82 (173)
....+++|+|+|.++++. .++.+..|+.+ +.. ..+........ .++|++++++|+.+.....+...+. .+ ..
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVK-SVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCce-EEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 456789999998766544 78888888743 322 22333344567 9999999999555544444544443 33 22
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE---EeeccccCcceEEE
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS---LVLDGLYFANGVAL 159 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~p~gi~~ 159 (173)
.......+. ......++++|+|.++++-. .++.|..++..+++.. .+.........|+|
T Consensus 141 ~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s-----------------~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 141 ECVSVLNSH-TQDVKHVVWHPSQELLASAS-----------------YDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp EEEEEECCC-CSCEEEEEECSSSSCEEEEE-----------------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred EEEEEecCc-CCCeEEEEECCCCCEEEEEe-----------------CCCcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 222222111 12457799999998666532 3356777776555422 12223455678999
Q ss_pred ccCCCEEEEEe
Q 030700 160 SEDERFLVVCE 170 (173)
Q Consensus 160 ~~dg~~lyv~~ 170 (173)
+|++++|+.+.
T Consensus 203 sp~g~~l~s~s 213 (345)
T 3fm0_A 203 DPSGQRLASCS 213 (345)
T ss_dssp CTTSSEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 99999877653
No 147
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.71 E-value=2.4e-06 Score=63.20 Aligned_cols=140 Identities=10% Similarity=0.036 Sum_probs=88.0
Q ss_pred CccCCcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--
Q 030700 7 GIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-- 80 (173)
Q Consensus 7 ~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-- 80 (173)
+--....+++|+|+|.+.++. .++.|..|+.. +.... +........ .++|.+++++++.+.....+...+. ++
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcE
Confidence 334567899999999766544 88999999864 44333 322333455 8899999998555544444544553 45
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC-eeEEeecc-ccCcceEE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-QTSLVLDG-LYFANGVA 158 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~~-~~~p~gi~ 158 (173)
...+.. .. .....++++|++.++++- ..++.|..+|.+++ .+.....+ ......++
T Consensus 90 ~~~~~~-h~----~~v~~~~~~~~~~~l~sg-----------------s~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 90 VVDFEA-HP----DYIRSIAVHPTKPYVLSG-----------------SDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp EEEEEC-CS----SCEEEEEECSSSSEEEEE-----------------ETTSCEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred EEEEeC-CC----CcEEEEEEcCCCCEEEEE-----------------CCCCeEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 333321 11 356789999999877763 23478888887655 33333333 44557899
Q ss_pred Ecc-CCCEEEEE
Q 030700 159 LSE-DERFLVVC 169 (173)
Q Consensus 159 ~~~-dg~~lyv~ 169 (173)
|+| +++.|+.+
T Consensus 148 ~~p~~~~~l~sg 159 (304)
T 2ynn_A 148 FNPKDPSTFASG 159 (304)
T ss_dssp ECTTCTTEEEEE
T ss_pred ECCCCCCEEEEE
Confidence 998 56655544
No 148
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.70 E-value=1.7e-06 Score=72.33 Aligned_cols=137 Identities=12% Similarity=0.202 Sum_probs=94.8
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEeccc---------cCccccceEEccCCc-EEEEEeCCCeEEEEcc-C
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQV---------GSQSLLGLTTTKENN-VIIVCDSQQGLLKVSE-E 79 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~~---------~~~p~~gl~~~~~g~-l~~v~~~~~~i~~~~~-~ 79 (173)
..+++.|++|.||++..++.|.++++. ++...+... ..... .++.+++|+ + |++....++.+++. .
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~l-Wigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLV-YIGTHAGGLSILHRNS 436 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEE-EEEETTTEEEEEETTT
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEE-EEEeCcCceeEEeCCC
Confidence 567888999999999877789999964 455544211 23456 788889999 7 98877779999996 4
Q ss_pred C-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-----c--
Q 030700 80 G-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-----L-- 151 (173)
Q Consensus 80 g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-----~-- 151 (173)
+ ...+.......+...+..+..+++|++|++.. +.|+++++++++.+..... +
T Consensus 437 ~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 497 (795)
T 4a2l_A 437 GQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVS 497 (795)
T ss_dssp CCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCC
T ss_pred CcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCC
Confidence 5 55553211111224567889999999999842 3689999987776655421 1
Q ss_pred cCcceEEEccCCCEEEEEe
Q 030700 152 YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~~ 170 (173)
.....|..+++|+ ||++.
T Consensus 498 ~~i~~i~~d~~g~-lWigt 515 (795)
T 4a2l_A 498 KQITTLFRDSHKR-LWIGG 515 (795)
T ss_dssp CCEEEEEECTTCC-EEEEE
T ss_pred ceEEEEEECCCCC-EEEEe
Confidence 2345678888886 66654
No 149
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.70 E-value=3.2e-07 Score=70.78 Aligned_cols=125 Identities=13% Similarity=0.067 Sum_probs=85.5
Q ss_pred EEEc-CCCCEEEEcCCCeEEEEcCCCcE-EE---ec---c----ccCccc--cceEEccCCcEEEEEeC----------C
Q 030700 15 VSVD-GNGVLYTATGDGWIKRMHPNGTW-ED---WH---Q----VGSQSL--LGLTTTKENNVIIVCDS----------Q 70 (173)
Q Consensus 15 l~~~-~~g~l~~~~~~~~i~~~~~~g~~-~~---~~---~----~~~~p~--~gl~~~~~g~l~~v~~~----------~ 70 (173)
++++ ++|++++....+.++.+|..+.. .. +. . .+..|. ..++++++++.+|++.. .
T Consensus 231 ~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 231 PAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp CEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred ceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 3555 58876655557889999875532 11 11 0 122233 03788988888799863 2
Q ss_pred CeEEEEcc-CC--cEEEEeccCCccccCCccEEEcCCCc--EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 71 QGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEASDGS--LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 71 ~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~dG~--~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
+.+..+|. ++ +..+... ..+++|++++||+ +|+++. .++.|..+|..++++.
T Consensus 311 ~~V~viD~~t~kv~~~i~vg------~~~~~lavs~D~~~~ly~tn~-----------------~~~~VsViD~~t~k~~ 367 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMG------HEIDSINVSQDEKPLLYALST-----------------GDKTLYIHDAESGEEL 367 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEE------EEECEEEECSSSSCEEEEEET-----------------TTTEEEEEETTTCCEE
T ss_pred CEEEEEECCCCeEEEEEECC------CCcceEEECCCCCeEEEEEcC-----------------CCCeEEEEECCCCcEE
Confidence 45888885 55 3333221 3678999999995 677653 3479999999999887
Q ss_pred EeeccccCcceEEEccC
Q 030700 146 LVLDGLYFANGVALSED 162 (173)
Q Consensus 146 ~~~~~~~~p~gi~~~~d 162 (173)
.-......||.|++++|
T Consensus 368 ~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 368 RSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEECCCCSSCCEEEECC
T ss_pred EEecCCCCCceeEECCc
Confidence 77888899999999998
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.70 E-value=8.5e-07 Score=72.79 Aligned_cols=157 Identities=13% Similarity=0.098 Sum_probs=93.9
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-C-----C-c
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-E-----G-V 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~-----g-~ 81 (173)
..+.+++++|++.+.++ .++.|+.++.+ ++...+........ .++++|||+.++++ ....|+.++. . | .
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCc
Confidence 45788999999655555 34889999964 45544444445567 89999999875554 3456777773 5 6 3
Q ss_pred EEEEeccCCc----------cccCCccEEEcCCCc-EEEEeCcCCcCcccce-----------ee--e-c--ccCCCceE
Q 030700 82 TVLVSQFNGS----------QLRFANDVIEASDGS-LYFTVSSTKFTPAEYY-----------LD--L-V--SGEPHGVL 134 (173)
Q Consensus 82 ~~~~~~~~~~----------~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~-----------~~--~-~--~~~~~~~v 134 (173)
..+....... .+..+..++++|||+ |+++.... .....+. .. + . .......|
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 3322111110 012358999999997 44442110 0000000 00 0 0 01234689
Q ss_pred EEEcCCCCeeEEeecc---ccCcceEEEccCCCEEEEEe
Q 030700 135 LKYDPSTNQTSLVLDG---LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 135 ~~~d~~~~~~~~~~~~---~~~p~gi~~~~dg~~lyv~~ 170 (173)
+.+|.++++...+... ...+..++|+|||+.|+++.
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 9999998877655432 23456899999999888854
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.70 E-value=2.1e-07 Score=76.60 Aligned_cols=136 Identities=10% Similarity=-0.021 Sum_probs=86.1
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEeccccC----ccccceEEccCCcEEEEEeC---------CCeEEEE
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQVGS----QSLLGLTTTKENNVIIVCDS---------QQGLLKV 76 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~~~~----~p~~gl~~~~~g~l~~v~~~---------~~~i~~~ 76 (173)
.+.+++|.|+|.++++..++.|+.++.+ |+...+..... ... .++++|||+.|+++.. ...++.+
T Consensus 17 ~~~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 17 KTFFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCCccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 3558899999977767678899999964 45444433222 256 8999999997555543 1245555
Q ss_pred ccC-CcEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc---
Q 030700 77 SEE-GVTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL--- 151 (173)
Q Consensus 77 ~~~-g~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--- 151 (173)
+.+ |...-..... .....++++|||+ |.++. ++.|+.++..+++...+....
T Consensus 96 d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~~~~ 152 (719)
T 1z68_A 96 DLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNGREN 152 (719)
T ss_dssp ETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCCBTT
T ss_pred ECCCCccccceecC----cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCCCcC
Confidence 643 3210000111 2467899999997 44442 258999998877665543221
Q ss_pred ----------------cCcceEEEccCCCEEEEEe
Q 030700 152 ----------------YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 ----------------~~p~gi~~~~dg~~lyv~~ 170 (173)
....+++|||||+.|+++.
T Consensus 153 ~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 153 KIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp TEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred CeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1124899999999887753
No 152
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.68 E-value=3.9e-06 Score=64.35 Aligned_cols=137 Identities=11% Similarity=0.037 Sum_probs=86.8
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEe-cccc------------------CccccceEEccCCcEEEEEeCC
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDW-HQVG------------------SQSLLGLTTTKENNVIIVCDSQ 70 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~-~~~~------------------~~p~~gl~~~~~g~l~~v~~~~ 70 (173)
...+++|+|+|.++++..++.+..|+. +|+.... .... .... .++|+++|++++.+...
T Consensus 66 ~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~d 144 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAED 144 (393)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcCC
Confidence 356899999998887766677777773 5554322 1110 1245 89999999985555444
Q ss_pred CeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 71 QGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 71 ~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
..+..++. ++ ......... .....++++|+|..+++.. .++.|..+|..+++.....
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~p~~~~l~s~s-----------------~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHE----QDIYSLDYFPSGDKLVSGS-----------------GDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTTEEEEEE
T ss_pred CeEEEEECCCCcEEEEEccCC----CCEEEEEEcCCCCEEEEec-----------------CCCcEEEEECCCCeeEEEE
Confidence 44544554 44 222222111 3467899999998766532 3478999999888765555
Q ss_pred ccccCcceEEEcc-CCCEEEEE
Q 030700 149 DGLYFANGVALSE-DERFLVVC 169 (173)
Q Consensus 149 ~~~~~p~gi~~~~-dg~~lyv~ 169 (173)
........++++| +++.++.+
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~ 225 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAG 225 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEE
Confidence 4445567889998 78876654
No 153
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.67 E-value=2.3e-06 Score=65.23 Aligned_cols=143 Identities=13% Similarity=0.076 Sum_probs=85.2
Q ss_pred cceEEEcCCCCEE-EEc--CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CCcEEEEe
Q 030700 12 PEDVSVDGNGVLY-TAT--GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EGVTVLVS 86 (173)
Q Consensus 12 p~~l~~~~~g~l~-~~~--~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g~~~~~~ 86 (173)
...++|.|+|.+. ++. .++.|..||. +++............ .++|+|+|++ +++...+++..++. ++......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~-l~s~s~~~~~~~~~~~~~~~~~~ 213 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKV-VAYITGSSLEVISTVTGSCIARK 213 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSE-EEEECSSCEEEEETTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCce-EEeccceeEEEEEeccCcceeee
Confidence 5679999999654 433 5678888985 444433334455677 9999999999 44444556777664 55222111
Q ss_pred ccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE-----eeccccCcceEEEcc
Q 030700 87 QFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL-----VLDGLYFANGVALSE 161 (173)
Q Consensus 87 ~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-----~~~~~~~p~gi~~~~ 161 (173)
...+. ......++++|+|..+++.... ......++.++........ +.......+.++|+|
T Consensus 214 ~~~~~-~~~v~~v~fspdg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 214 TDFDK-NWSLSKINFIADDTVLIAASLK-------------KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp CCCCT-TEEEEEEEEEETTEEEEEEEES-------------SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred ecCCC-CCCEEEEEEcCCCCEEEEEecC-------------CcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 11111 1345779999999876653210 0111245566654443221 222344567899999
Q ss_pred CCCEEEEEe
Q 030700 162 DERFLVVCE 170 (173)
Q Consensus 162 dg~~lyv~~ 170 (173)
||++|..+.
T Consensus 280 dg~~lasgs 288 (365)
T 4h5i_A 280 KGELAVLAS 288 (365)
T ss_dssp TSCEEEEEE
T ss_pred CCCceEEEc
Confidence 999887653
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.66 E-value=5e-07 Score=68.64 Aligned_cols=149 Identities=10% Similarity=0.019 Sum_probs=85.8
Q ss_pred CcceEEEcC-CCC-EEEEc-C-----CCeEEEEcCCCc-EEEecccc--CccccceEEccCCcEE-EEEeCCC----eEE
Q 030700 11 HPEDVSVDG-NGV-LYTAT-G-----DGWIKRMHPNGT-WEDWHQVG--SQSLLGLTTTKENNVI-IVCDSQQ----GLL 74 (173)
Q Consensus 11 ~p~~l~~~~-~g~-l~~~~-~-----~~~i~~~~~~g~-~~~~~~~~--~~p~~gl~~~~~g~l~-~v~~~~~----~i~ 74 (173)
....++++| +|. |.+.. . ...|+.++.++. ...+.... .... .++|++||+.| |++.... .++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCT-HEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEE-EEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccc-cceECCCCCEEEEEecCCCCCcceEE
Confidence 356789999 885 44433 2 347999987654 33333322 1345 78899999853 5554321 277
Q ss_pred EEcc-CC-cEEEEeccCC--ccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec
Q 030700 75 KVSE-EG-VTVLVSQFNG--SQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD 149 (173)
Q Consensus 75 ~~~~-~g-~~~~~~~~~~--~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 149 (173)
.++. .| .+.+.. ..+ .....+.+++++|||+ ++++.... . .........|+++|+++++.+.+..
T Consensus 268 ~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~--------~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 268 SADPETLENRQLTS-MPACSHLMSNYDGSLMVGDGSDAPVDVQDD-S--------GYKIENDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp EECTTTCCEEEEEE-ECCEEEEEECTTSSEEEEEECCC---------------------CCCCEEEEEETTTTEEEEEEE
T ss_pred EEecCCCceEEEEc-CCCceeeeecCCCCeEccCCCcceeEeeec-c--------ccccCCCCEEEEEeccCCceEEecc
Confidence 8885 45 444432 221 0112356668888886 44432100 0 0001234589999999888777665
Q ss_pred ccc-----------CcceEEEccCCCEEEEEe
Q 030700 150 GLY-----------FANGVALSEDERFLVVCE 170 (173)
Q Consensus 150 ~~~-----------~p~gi~~~~dg~~lyv~~ 170 (173)
... ....++|+|||+.|+++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s 369 (388)
T 3pe7_A 338 HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTS 369 (388)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred ccCcccccccccccCCCCccCCCCCCEEEEEe
Confidence 443 456789999999888753
No 155
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.66 E-value=1.7e-06 Score=65.26 Aligned_cols=139 Identities=12% Similarity=0.102 Sum_probs=83.3
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcCCC-cEE---Ee-ccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cE
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHPNG-TWE---DW-HQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VT 82 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g-~~~---~~-~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~ 82 (173)
....++|+|+|.++++. .++.|..|+.++ ... .. ........ .++|+++|++|+.+.....+...+. .+ .+
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence 34579999999766554 888898888544 322 11 12234566 8999999998555544433443343 33 22
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee---E-EeeccccCcceEE
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT---S-LVLDGLYFANGVA 158 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~---~-~~~~~~~~p~gi~ 158 (173)
.+. .+.+. ......++++|+|+++++.. .++.|..+|..++.. . .+.......+.++
T Consensus 97 ~~~-~~~~h-~~~v~~v~~sp~~~~l~s~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 97 CVT-TLEGH-ENEVKSVAWAPSGNLLATCS-----------------RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEE-EECCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred EEE-EccCC-CCCceEEEEeCCCCEEEEEE-----------------CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 222 12221 13568899999998777632 346777777654421 1 1222234457899
Q ss_pred EccCCCEEEEE
Q 030700 159 LSEDERFLVVC 169 (173)
Q Consensus 159 ~~~dg~~lyv~ 169 (173)
|+|+++.|+.+
T Consensus 158 ~~p~~~~l~s~ 168 (345)
T 3fm0_A 158 WHPSQELLASA 168 (345)
T ss_dssp ECSSSSCEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999877654
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.65 E-value=2.2e-06 Score=64.03 Aligned_cols=143 Identities=14% Similarity=0.050 Sum_probs=90.3
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC-----CeEEEEcc--CC
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-----QGLLKVSE--EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-----~~i~~~~~--~g 80 (173)
....+++++|++.+++ +..++.|..|+. +++............ .+++++++++++++... ..+..++. ..
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 4567899999886554 448889999985 455544434555677 99999999995655543 34444442 22
Q ss_pred -cEEEEeccC--------CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC-CeeEEeec-
Q 030700 81 -VTVLVSQFN--------GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST-NQTSLVLD- 149 (173)
Q Consensus 81 -~~~~~~~~~--------~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~- 149 (173)
...+..... .........++++|+|.++++- ..++.|..+|..+ ++......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAG-----------------HKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEE-----------------ETTSEEEEEETTTTTEEEEEEEC
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEE-----------------cCCCEEEEEECCCCcEeEEEEec
Confidence 111111100 0001256788999999765552 1347899999886 44433333
Q ss_pred cccCcceEEEccCCCEEEEEe
Q 030700 150 GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 150 ~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.......++|+|+++.|+++.
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeEEEECCCCCEEEEec
Confidence 345567899999999887764
No 157
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.64 E-value=1.4e-05 Score=58.92 Aligned_cols=138 Identities=17% Similarity=0.150 Sum_probs=89.1
Q ss_pred CCcceEEEcCCCCEEEE-cCCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 10 NHPEDVSVDGNGVLYTA-TGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~-~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
....++++.|++.++++ ..++.|..|+. +++.. .+........ .+++++++++++.+.....+..++. ++ ...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 45678999999876654 48889999985 45443 3333344566 8999999998555544444555554 44 232
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-cc-ccCcceEEEcc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DG-LYFANGVALSE 161 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~-~~~p~gi~~~~ 161 (173)
+. ... .....++++|+|.++++.. .++.|..+|..+++..... .. ......++|+|
T Consensus 145 ~~-~~~----~~v~~~~~~~~~~~l~~~~-----------------~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (312)
T 4ery_A 145 LP-AHS----DPVSAVHFNRDGSLIVSSS-----------------YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSP 202 (312)
T ss_dssp EC-CCS----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECT
T ss_pred ec-CCC----CcEEEEEEcCCCCEEEEEe-----------------CCCcEEEEECCCCceeeEEeccCCCceEEEEECC
Confidence 21 111 2457799999998766532 3478888998876543322 22 23346799999
Q ss_pred CCCEEEEEe
Q 030700 162 DERFLVVCE 170 (173)
Q Consensus 162 dg~~lyv~~ 170 (173)
++++|+++.
T Consensus 203 ~~~~l~~~~ 211 (312)
T 4ery_A 203 NGKYILAAT 211 (312)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEc
Confidence 999887754
No 158
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.63 E-value=2.2e-06 Score=66.58 Aligned_cols=138 Identities=12% Similarity=0.040 Sum_probs=85.2
Q ss_pred CcceEEEcC-CCCEE-EEcCCCeEEEEcCC-CcEE---EeccccCccccceEEcc-CCcEEEEEeCCCeEEE-EccCC--
Q 030700 11 HPEDVSVDG-NGVLY-TATGDGWIKRMHPN-GTWE---DWHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLK-VSEEG-- 80 (173)
Q Consensus 11 ~p~~l~~~~-~g~l~-~~~~~~~i~~~~~~-g~~~---~~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~-~~~~g-- 80 (173)
...+|+|+| ++.++ ++..+|.|..||.+ +... ......+... +|+|+| ++++|+.+ ..++.++ .+..+
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~-s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYAS-SMEGTTRLQDFKGNI 198 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEE-CSSSCEEEEETTSCE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEE-eCCCEEEEeeccCCc
Confidence 357899999 56655 45588999999854 3322 2223344567 999997 67884444 4444444 44444
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEc
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALS 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~ 160 (173)
...+... .. .......++++++|.++++- ..++.|..+|.++..+..+.......+.|+|+
T Consensus 199 ~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~g-----------------~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~ 259 (435)
T 4e54_B 199 LRVFASS-DT-INIWFCSLDVSASSRMVVTG-----------------DNVGNVILLNMDGKELWNLRMHKKKVTHVALN 259 (435)
T ss_dssp EEEEECC-SS-CSCCCCCEEEETTTTEEEEE-----------------CSSSBEEEEESSSCBCCCSBCCSSCEEEEEEC
T ss_pred eeEEecc-CC-CCccEEEEEECCCCCEEEEE-----------------eCCCcEeeeccCcceeEEEecccceEEeeeec
Confidence 3433322 11 11345779999999877763 23478888998755443333334456789999
Q ss_pred cCCCEEEEE
Q 030700 161 EDERFLVVC 169 (173)
Q Consensus 161 ~dg~~lyv~ 169 (173)
|+++.++++
T Consensus 260 p~~~~~~~s 268 (435)
T 4e54_B 260 PCCDWFLAT 268 (435)
T ss_dssp TTCSSEEEE
T ss_pred CCCceEEEE
Confidence 998755543
No 159
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.63 E-value=8.3e-06 Score=62.50 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=86.8
Q ss_pred cceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEe
Q 030700 12 PEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVS 86 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~ 86 (173)
..+++|.|+|.++++. .++.|..||.. ++... +........ .++|+++++.++.+.....+...+. ++ ......
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 4689999999766544 88899999964 44433 333344567 9999999998555544444444453 45 222222
Q ss_pred ccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--------cccCcceE
Q 030700 87 QFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--------GLYFANGV 157 (173)
Q Consensus 87 ~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--------~~~~p~gi 157 (173)
. . .....++++| +|+++++.. .++.|..+|..+++...... .......+
T Consensus 205 ~-~----~~v~~~~~~~~~~~~l~~~s-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 205 I-E----DGVTTVAVSPGDGKYIAAGS-----------------LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp C-S----SCEEEEEECSTTCCEEEEEE-----------------TTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred c-C----CCcEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 1 1 2456788998 888766632 34688888988765433321 12345789
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|+++.|+.+.
T Consensus 263 ~~~~~g~~l~s~s 275 (393)
T 1erj_A 263 VFTRDGQSVVSGS 275 (393)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCEEEEEe
Confidence 9999999887653
No 160
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.63 E-value=6e-06 Score=62.05 Aligned_cols=137 Identities=12% Similarity=0.109 Sum_probs=88.2
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEEE
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVLV 85 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~~ 85 (173)
...++.+.+++.++.+..++.|..||. +++.. .+........ .+++++++++++.+.....+..++. .+ ...+.
T Consensus 145 ~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~ 223 (340)
T 1got_B 145 YLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVM-SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT 223 (340)
T ss_dssp CEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC
T ss_pred cEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceE-EEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc
Confidence 345677777788777778899999985 45443 3333445567 9999999998444443334544553 45 33332
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc---ccCcceEEEccC
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG---LYFANGVALSED 162 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~p~gi~~~~d 162 (173)
... ...+.++++|+|+++++-. .++.|..+|..+++....... ......++|+|+
T Consensus 224 -~h~----~~v~~v~~~p~~~~l~s~s-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 224 -GHE----SDINAICFFPNGNAFATGS-----------------DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp -CCS----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTT
T ss_pred -CCc----CCEEEEEEcCCCCEEEEEc-----------------CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCC
Confidence 111 3568899999998777632 347888899876654333322 123567999999
Q ss_pred CCEEEEEe
Q 030700 163 ERFLVVCE 170 (173)
Q Consensus 163 g~~lyv~~ 170 (173)
+++|+.+.
T Consensus 282 g~~l~~g~ 289 (340)
T 1got_B 282 GRLLLAGY 289 (340)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEC
Confidence 99877654
No 161
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.62 E-value=5.8e-06 Score=62.03 Aligned_cols=142 Identities=8% Similarity=-0.078 Sum_probs=87.4
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcC-CCcEEE---eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-c-
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHP-NGTWED---WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-V- 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~-~g~~~~---~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~- 81 (173)
....++++.|++.+++ +..++.|..|+. +++... ......... .+++++++++++++.....+..++. .+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 4567899999887654 447888998885 444322 223345567 9999999998566655444544442 22 2
Q ss_pred EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCC------------------CCe
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS------------------TNQ 143 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~------------------~~~ 143 (173)
......... .......++++|+|.++++.. .++.|..+|.. .++
T Consensus 132 ~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 132 WVCKHIKKP-IRSTVLSLDWHPNSVLLAAGS-----------------CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEEECTT-CCSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred eeeeeeecc-cCCCeeEEEEcCCCCEEEEEc-----------------CCCCEEEEEcccccccccccccccccccchhh
Confidence 222111111 124568899999998666532 23677777732 333
Q ss_pred eEEee-ccccCcceEEEccCCCEEEEEe
Q 030700 144 TSLVL-DGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ~~~~~-~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
..... ......+.++|+|+++.|+++.
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 221 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVS 221 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEE
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEe
Confidence 33333 2344567899999999887764
No 162
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.62 E-value=7e-06 Score=62.24 Aligned_cols=140 Identities=9% Similarity=-0.001 Sum_probs=90.3
Q ss_pred CCcceEEEcCCC-CEEEEc-CCCeEEEEcCC-CcEEEec---cccCccccceEEcc-CCcEEEEEeCCCeEEEEccCC--
Q 030700 10 NHPEDVSVDGNG-VLYTAT-GDGWIKRMHPN-GTWEDWH---QVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVSEEG-- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~-~~~~i~~~~~~-g~~~~~~---~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~~~g-- 80 (173)
....+++++|+| .++++. .++.|..|+.. ++..... ....... +++|++ ++++++.+.....+..++..+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGSV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 556789999988 666544 78899999864 4433322 2345567 999999 667745555444455555444
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEc
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALS 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~ 160 (173)
...+... .+ .......++++|+|.++++- ..++.|..+|..+..+..+.........++|+
T Consensus 153 ~~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~-----------------~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 153 IQVFAKT-DS-WDYWYCCVDVSVSRQMLATG-----------------DSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEECC-CC-SSCCEEEEEEETTTTEEEEE-----------------ETTSEEEEEETTSCEEEEEECSSSCEEEEEEC
T ss_pred eEEEecc-CC-CCCCeEEEEECCCCCEEEEE-----------------CCCCCEEEEECCCCEEEEeccCCCcEEEEEEC
Confidence 3333321 11 11346789999999866653 23478999998644454554445667899999
Q ss_pred cCCC-EEEEE
Q 030700 161 EDER-FLVVC 169 (173)
Q Consensus 161 ~dg~-~lyv~ 169 (173)
|+++ .++.+
T Consensus 214 ~~~~~~l~s~ 223 (383)
T 3ei3_B 214 PRCDWLMATS 223 (383)
T ss_dssp SSCTTEEEEE
T ss_pred CCCCCEEEEE
Confidence 9998 56554
No 163
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.62 E-value=6.3e-06 Score=62.40 Aligned_cols=139 Identities=11% Similarity=-0.004 Sum_probs=86.4
Q ss_pred cceEEEcC--CCCEEE-EcCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEE
Q 030700 12 PEDVSVDG--NGVLYT-ATGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVL 84 (173)
Q Consensus 12 p~~l~~~~--~g~l~~-~~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~ 84 (173)
..++++.+ +|.+++ +..++.|..||. +++... +........ +++++|++++++.+.....+..++. .+ ....
T Consensus 199 v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 199 VLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVN-SVRYYPSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp EEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred eEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 45677776 465554 458899999995 555443 333345567 9999999998454443333444443 33 2211
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceEEEccCC
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGVALSEDE 163 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi~~~~dg 163 (173)
... .........++++|+|.++++-. .++.|..+|..+++..... ........++|+||+
T Consensus 278 ~~~--~~~~~~~~~~~~s~~g~~l~~g~-----------------~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg 338 (354)
T 2pbi_B 278 YSK--ESIIFGASSVDFSLSGRLLFAGY-----------------NDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG 338 (354)
T ss_dssp ECC--TTCCSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS
T ss_pred EcC--CCcccceeEEEEeCCCCEEEEEE-----------------CCCcEEEEECCCCceEEEEECCCCcEEEEEECCCC
Confidence 111 11112456799999998777632 3478899998766543333 334556789999999
Q ss_pred CEEEEEe
Q 030700 164 RFLVVCE 170 (173)
Q Consensus 164 ~~lyv~~ 170 (173)
++|..+.
T Consensus 339 ~~l~sgs 345 (354)
T 2pbi_B 339 TAFCSGS 345 (354)
T ss_dssp SCEEEEE
T ss_pred CEEEEEc
Confidence 9776653
No 164
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.62 E-value=8.1e-06 Score=62.50 Aligned_cols=139 Identities=12% Similarity=0.017 Sum_probs=88.9
Q ss_pred CCcceEEEcC-CCCEEEEc-CCCeEEEEcC-CCc--------EEEeccccCccccceEEccCC-cEEEEEeCCCeEEEEc
Q 030700 10 NHPEDVSVDG-NGVLYTAT-GDGWIKRMHP-NGT--------WEDWHQVGSQSLLGLTTTKEN-NVIIVCDSQQGLLKVS 77 (173)
Q Consensus 10 ~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~-~g~--------~~~~~~~~~~p~~gl~~~~~g-~l~~v~~~~~~i~~~~ 77 (173)
....+++|+| ++.++++. .++.|..|+. ++. ...+........ .+++++++ ++++.+.....+..++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEE
Confidence 4467899999 88766555 7888999984 331 223333445667 99999998 5745554444455555
Q ss_pred c-CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccc--
Q 030700 78 E-EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGL-- 151 (173)
Q Consensus 78 ~-~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~-- 151 (173)
. .+ ...+..... ......++++|+|.++++.. .++.|..+|+.+++..... ...
T Consensus 161 ~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVH---PDTIYSVDWSRDGALICTSC-----------------RDKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTTTEEEEEECTTTC---CSCEEEEEECTTSSCEEEEE-----------------TTSEEEEEETTTTEEEEEEECSSCS
T ss_pred CCCCCccEEEecCCC---CCceEEEEECCCCCEEEEEe-----------------cCCcEEEEeCCCCceeeeeccCCCC
Confidence 3 44 222210111 13568899999997655521 3478999999887655444 332
Q ss_pred cCcceEEEccCCCEEEEE
Q 030700 152 YFANGVALSEDERFLVVC 169 (173)
Q Consensus 152 ~~p~gi~~~~dg~~lyv~ 169 (173)
..+..++|+|+++.|+++
T Consensus 221 ~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp SSCCEEEECSTTEEEEEE
T ss_pred CcceEEEEcCCCcEEEEe
Confidence 236789999999877765
No 165
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.61 E-value=4.8e-06 Score=62.50 Aligned_cols=141 Identities=9% Similarity=0.009 Sum_probs=87.0
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCCCc----EEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGT----WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VT 82 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~----~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~ 82 (173)
....+++++|+|.++++. .++.|..|+.++. ...+........ ++++++++++++.+.....+..++. .+ ..
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK 87 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeee
Confidence 456889999999766544 7889999985443 223333445567 9999999998565554444555553 44 22
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe----eEEeecc-ccCcceE
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ----TSLVLDG-LYFANGV 157 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~----~~~~~~~-~~~p~gi 157 (173)
....... ....+..++++|+|+++++-. .++.|..+|.+++. ....... ......+
T Consensus 88 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~-----------------~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~ 148 (372)
T 1k8k_C 88 PTLVILR--INRAARCVRWAPNEKKFAVGS-----------------GSRVISICYFEQENDWWVCKHIKKPIRSTVLSL 148 (372)
T ss_dssp EEEECCC--CSSCEEEEEECTTSSEEEEEE-----------------TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEE
T ss_pred eeEEeec--CCCceeEEEECCCCCEEEEEe-----------------CCCEEEEEEecCCCcceeeeeeecccCCCeeEE
Confidence 2221111 113568899999998666522 23566666655443 2222222 3456789
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|+++.++++.
T Consensus 149 ~~~~~~~~l~~~~ 161 (372)
T 1k8k_C 149 DWHPNSVLLAAGS 161 (372)
T ss_dssp EECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEc
Confidence 9999998877654
No 166
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.61 E-value=1.6e-06 Score=74.56 Aligned_cols=145 Identities=11% Similarity=0.070 Sum_probs=92.5
Q ss_pred cceEEEcCCC-CEEEEcCCCeEE-EEcCCC-cEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEe
Q 030700 12 PEDVSVDGNG-VLYTATGDGWIK-RMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVS 86 (173)
Q Consensus 12 p~~l~~~~~g-~l~~~~~~~~i~-~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~ 86 (173)
..+++|. +| .|++...+..++ .++.++ ....+........ .+++++||+.++++.....++.++. +| ...+..
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 4567777 77 355444466788 788654 4444443335667 8999999998666666667777775 55 444432
Q ss_pred ccCCccccCCccEEEcCCCcEEE-EeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCE
Q 030700 87 QFNGSQLRFANDVIEASDGSLYF-TVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERF 165 (173)
Q Consensus 87 ~~~~~~~~~~~~l~~~~dG~~~v-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~ 165 (173)
... .....++++|||+.++ +.....+. ......+.|+.+|.+++++..+.........++|+|||++
T Consensus 418 ~~~----~~v~~~~~SpDG~~la~~~~~~~~~--------~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 418 SRE----AMITDFTISDNSRFIAYGFPLKHGE--------TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKN 485 (1045)
T ss_dssp CSS----SCCCCEEECTTSCEEEEEEEECSST--------TCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCE
T ss_pred CCC----CCccceEECCCCCeEEEEecCcccc--------ccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCE
Confidence 221 2457899999998444 32110000 0001235899999988886666555566678999999999
Q ss_pred EEEEe
Q 030700 166 LVVCE 170 (173)
Q Consensus 166 lyv~~ 170 (173)
||++.
T Consensus 486 l~~~s 490 (1045)
T 1k32_A 486 LYYLS 490 (1045)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88764
No 167
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.61 E-value=9.5e-07 Score=62.85 Aligned_cols=102 Identities=20% Similarity=0.152 Sum_probs=68.6
Q ss_pred ceecCCccCCcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEeccc------cC--ccccceEEccCCcEEEEEeCCCe
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQV------GS--QSLLGLTTTKENNVIIVCDSQQG 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~~------~~--~p~~gl~~~~~g~l~~v~~~~~~ 72 (173)
.+++++.......++++|+|.||+. ..+.+++.++ ++.-..|... .+ .=. .+.||++|.+ |+... ..
T Consensus 33 ~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~-a~~fD~~G~L-Yav~d-G~ 108 (236)
T 1tl2_A 33 TLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQ-FLFFDPNGYL-YAVSK-DK 108 (236)
T ss_dssp EEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCS-EEEECTTSCE-EEEET-TE
T ss_pred cccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccce-EEEECCCCCE-EEeCC-CE
Confidence 4566755778889999999999977 7789999986 4222222111 11 124 7889999999 88843 57
Q ss_pred EEEEcc--CC-c------EEEEeccCCccccCCccEEEcCCCcEEEEe
Q 030700 73 LLKVSE--EG-V------TVLVSQFNGSQLRFANDVIEASDGSLYFTV 111 (173)
Q Consensus 73 i~~~~~--~g-~------~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~ 111 (173)
|+++++ ++ . ..+.+. + -...+.|.++|+|.||...
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~--g--w~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSG--G--WSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECS--S--GGGEEEEEECTTSCEEEEE
T ss_pred EEEeCCCcCCCCceeccccEeccC--C--CCceEEEEECCCceEEEEe
Confidence 889884 33 1 222211 1 1234789999999999986
No 168
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.61 E-value=9.3e-07 Score=72.89 Aligned_cols=154 Identities=11% Similarity=0.027 Sum_probs=90.4
Q ss_pred cceEEEcCCCCE-EEEcCCCeEEEEcCC-C---cEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-cEEE
Q 030700 12 PEDVSVDGNGVL-YTATGDGWIKRMHPN-G---TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G-VTVL 84 (173)
Q Consensus 12 p~~l~~~~~g~l-~~~~~~~~i~~~~~~-g---~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g-~~~~ 84 (173)
..+++|+|+|+. +++.. +.|+.++.+ + ....+........ .++|+|||+.++++. ...|+.++.+ + ...+
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 578999999964 44444 889999964 4 4444444445677 899999999755554 3468877754 4 3333
Q ss_pred EeccCCc------------cccCCccEEEcCCCc-EEEEeCcCCcCcccc-----------e--eeec---ccCCCceEE
Q 030700 85 VSQFNGS------------QLRFANDVIEASDGS-LYFTVSSTKFTPAEY-----------Y--LDLV---SGEPHGVLL 135 (173)
Q Consensus 85 ~~~~~~~------------~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~-----------~--~~~~---~~~~~~~v~ 135 (173)
....... .+..+..++++|||+ |+++..... ....+ . ..+. .......|+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES-PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT-TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC-CCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 2211100 011257899999997 555532100 00000 0 0000 001123889
Q ss_pred EEcCCC-CeeEEeecc---ccCcceEEEccCCCEEEEEe
Q 030700 136 KYDPST-NQTSLVLDG---LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 136 ~~d~~~-~~~~~~~~~---~~~p~gi~~~~dg~~lyv~~ 170 (173)
.+|.++ ++...+... ......++| |||++|+++.
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 999988 776655422 344568999 9999988764
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.60 E-value=1.8e-06 Score=70.28 Aligned_cols=142 Identities=14% Similarity=0.093 Sum_probs=87.9
Q ss_pred CcceEEEcCCCC-EEEEcCC----------CeEEEEcCCC-------cEEEec-cccCccccceEEccCCcEEEEEeCC-
Q 030700 11 HPEDVSVDGNGV-LYTATGD----------GWIKRMHPNG-------TWEDWH-QVGSQSLLGLTTTKENNVIIVCDSQ- 70 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~~~----------~~i~~~~~~g-------~~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~- 70 (173)
...+++|+|+|+ |+++..+ ..|+.++.++ ....+. ....... .+++++||+.|+++...
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVT-GPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEEC-CCEECTTSSEEEEEEECT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCccc-CceECCCCCEEEEEECCC
Confidence 356789999985 5555432 4789998755 445554 3345566 88999999876655422
Q ss_pred -------CeEEEEcc--CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCC
Q 030700 71 -------QGLLKVSE--EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS 140 (173)
Q Consensus 71 -------~~i~~~~~--~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 140 (173)
..|+.++. +| .........+. ...+..++++|||++|++.... ....|+++|++
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~---------------~~~~l~~~~~~ 273 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRT---------------GWWNLHRVDPA 273 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTT---------------SSCEEEEECTT
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCC---------------CCeEEEEEECC
Confidence 24776664 34 22222211110 1356778999999987764321 12389999987
Q ss_pred CCeeEEeeccc-cC--------cceEEEccCCCEEEEE
Q 030700 141 TNQTSLVLDGL-YF--------ANGVALSEDERFLVVC 169 (173)
Q Consensus 141 ~~~~~~~~~~~-~~--------p~gi~~~~dg~~lyv~ 169 (173)
+++.+.+.... .. ...++|+|+++.+|.+
T Consensus 274 ~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 274 TGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp TCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred CCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 77766554421 11 3568899998866654
No 170
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.60 E-value=1.1e-05 Score=61.24 Aligned_cols=135 Identities=10% Similarity=0.081 Sum_probs=85.2
Q ss_pred CCcceEEEcCCCCEEEE-cCCCeEEEEcCC-CcEEE-ecc---c---cCccccceEEccCCcEEEEEeCC---CeEEEEc
Q 030700 10 NHPEDVSVDGNGVLYTA-TGDGWIKRMHPN-GTWED-WHQ---V---GSQSLLGLTTTKENNVIIVCDSQ---QGLLKVS 77 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~-~~~~~i~~~~~~-g~~~~-~~~---~---~~~p~~gl~~~~~g~l~~v~~~~---~~i~~~~ 77 (173)
....++++.|++ ++++ ..++.|..|+.. ++... +.. . ..... .+++++++++++++... ..+..++
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~-~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR-SVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE-EEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc-eEEECCCCCEEEEEecCCCCceEEEEE
Confidence 457889999988 5544 478899999854 54433 322 2 45567 99999999985554433 3455555
Q ss_pred c-CC--cEEEEeccC-C-------ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 78 E-EG--VTVLVSQFN-G-------SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 78 ~-~g--~~~~~~~~~-~-------~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
. ++ ...+..... . ........++++|+|.++++.. .++.|..||..+++...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 265 TEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-----------------WDGKLRFWDVKTKERIT 327 (397)
T ss_dssp TTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-----------------TTSEEEEEETTTTEEEE
T ss_pred CCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-----------------CCCeEEEEEcCCCceeE
Confidence 3 44 333321000 0 0113567899999998766632 34789999988776544
Q ss_pred eec------c----------------ccCcceEEEccCC
Q 030700 147 VLD------G----------------LYFANGVALSEDE 163 (173)
Q Consensus 147 ~~~------~----------------~~~p~gi~~~~dg 163 (173)
... . ....+.++|+|++
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 443 2 3456789999998
No 171
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.59 E-value=2.1e-05 Score=59.99 Aligned_cols=140 Identities=15% Similarity=0.153 Sum_probs=88.6
Q ss_pred CcceEEEcC-CCCEEEEc-CCCeEEEEcCC--Cc-EEEeccccCccccceEEccCCcEEEEEeCCCeEEEE-cc-CC--c
Q 030700 11 HPEDVSVDG-NGVLYTAT-GDGWIKRMHPN--GT-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKV-SE-EG--V 81 (173)
Q Consensus 11 ~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~--g~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~-~~-~g--~ 81 (173)
...++++.+ ++.++++. .++.|..||.. ++ ...+........ .++|+|++++ +++...++.+++ +. .+ .
T Consensus 207 ~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 207 DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQR-FGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSE-EEEECSSSCEEEEETTTTEEE
T ss_pred CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCe-EEEEcCCCeEEEEECCCCcEE
Confidence 345677877 77777655 88899999853 23 333434455667 9999999998 555555554444 43 55 2
Q ss_pred EEEEeccC--CccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-----cccCc
Q 030700 82 TVLVSQFN--GSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-----GLYFA 154 (173)
Q Consensus 82 ~~~~~~~~--~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-----~~~~p 154 (173)
..+..... .........++++|+|+++++-. .++.|..+|..+++...... .....
T Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 347 (380)
T 3iz6_a 285 QVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-----------------SNGDCYVWDTLLAEMVLNLGTLQNSHEGRI 347 (380)
T ss_dssp EEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC-----------------TTSCEEEEETTTCCEEEEECCSCSSCCCCC
T ss_pred EEecccccccccccCceEEEEECCCCCEEEEEE-----------------CCCCEEEEECCCCceEEEEecccCCCCCce
Confidence 32221111 11122467899999998777632 35789999987665433331 23456
Q ss_pred ceEEEccCCCEEEEE
Q 030700 155 NGVALSEDERFLVVC 169 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~ 169 (173)
+.++|+|||++|+.+
T Consensus 348 ~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 348 SCLGLSSDGSALCTG 362 (380)
T ss_dssp CEEEECSSSSEEEEE
T ss_pred EEEEECCCCCEEEEe
Confidence 789999999977654
No 172
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.59 E-value=4.9e-06 Score=63.10 Aligned_cols=138 Identities=12% Similarity=0.019 Sum_probs=90.6
Q ss_pred CCcceEEEcC-CCCEE-EEcCCCeEEEEcCCCcEE-Eecccc---CccccceEEccCCcEEEEEeCCCeEEEEccCC--c
Q 030700 10 NHPEDVSVDG-NGVLY-TATGDGWIKRMHPNGTWE-DWHQVG---SQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--V 81 (173)
Q Consensus 10 ~~p~~l~~~~-~g~l~-~~~~~~~i~~~~~~g~~~-~~~~~~---~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~ 81 (173)
....+++|.| ++.++ .+..++.|..|+..+... .+.... .... .+++++++++++.+.....+..++.++ .
T Consensus 119 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 119 DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHEI 197 (383)
T ss_dssp CBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEE-EEEEETTTTEEEEEETTSEEEEEETTSCEE
T ss_pred CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeE-EEEECCCCCEEEEECCCCCEEEEECCCCEE
Confidence 4567899999 66555 455889999999766533 222222 3466 899999999956555555555556555 3
Q ss_pred EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCC----CeeEEeeccccCcce
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST----NQTSLVLDGLYFANG 156 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~----~~~~~~~~~~~~p~g 156 (173)
..+.. .. .....++++|+|. ++++.. .++.|..+|..+ +..............
T Consensus 198 ~~~~~-h~----~~v~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 255 (383)
T 3ei3_B 198 FKEKL-HK----AKVTHAEFNPRCDWLMATSS-----------------VDATVKLWDLRNIKDKNSYIAEMPHEKPVNA 255 (383)
T ss_dssp EEEEC-SS----SCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEEGGGCCSTTCEEEEEECSSCEEE
T ss_pred EEecc-CC----CcEEEEEECCCCCCEEEEEe-----------------CCCEEEEEeCCCCCcccceEEEecCCCceEE
Confidence 33321 11 3568899999997 666632 346888888765 334333334556688
Q ss_pred EEEcc-CCCEEEEEe
Q 030700 157 VALSE-DERFLVVCE 170 (173)
Q Consensus 157 i~~~~-dg~~lyv~~ 170 (173)
++|+| +++.|+++.
T Consensus 256 ~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 256 AYFNPTDSTKLLTTD 270 (383)
T ss_dssp EEECTTTSCEEEEEE
T ss_pred EEEcCCCCCEEEEEc
Confidence 99999 999887764
No 173
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.58 E-value=1.6e-05 Score=59.21 Aligned_cols=139 Identities=12% Similarity=0.095 Sum_probs=88.3
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcEE-EeccccCccccceEEccC------CcEEEEEeCCCeEEEEcc-CC
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTWE-DWHQVGSQSLLGLTTTKE------NNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~~-~~~~~~~~p~~gl~~~~~------g~l~~v~~~~~~i~~~~~-~g 80 (173)
....+++++|++.++++. .++.|..|+..+... .+........ .+++.+. +.+++.+.....+...+. .+
T Consensus 108 ~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 108 SDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVS-QVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEE-EEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 446788999988766554 888999999776543 3333344455 7777764 445344443333444443 33
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVAL 159 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~ 159 (173)
........ ....+.++++|+|.++++- ..++.|..+|..+++.............++|
T Consensus 187 ~~~~~~~~h----~~~v~~~~~sp~g~~l~s~-----------------~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 245 (319)
T 3frx_A 187 QIEADFIGH----NSNINTLTASPDGTLIASA-----------------GKDGEIMLWNLAAKKAMYTLSAQDEVFSLAF 245 (319)
T ss_dssp EEEEEECCC----CSCEEEEEECTTSSEEEEE-----------------ETTCEEEEEETTTTEEEEEEECCSCEEEEEE
T ss_pred hhheeecCC----CCcEEEEEEcCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEecCCCcEEEEEE
Confidence 22111111 1356789999999877763 2357899999987765544444455678999
Q ss_pred ccCCCEEEEEe
Q 030700 160 SEDERFLVVCE 170 (173)
Q Consensus 160 ~~dg~~lyv~~ 170 (173)
+|++..|..+.
T Consensus 246 sp~~~~la~~~ 256 (319)
T 3frx_A 246 SPNRYWLAAAT 256 (319)
T ss_dssp CSSSSEEEEEE
T ss_pred cCCCCEEEEEc
Confidence 99999877653
No 174
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.56 E-value=2.4e-06 Score=66.61 Aligned_cols=137 Identities=16% Similarity=0.239 Sum_probs=84.2
Q ss_pred ceEEEcCCCCEEEEcCCCeEEEEc-CCCc---EE-Eeccc----------------------------------------
Q 030700 13 EDVSVDGNGVLYTATGDGWIKRMH-PNGT---WE-DWHQV---------------------------------------- 47 (173)
Q Consensus 13 ~~l~~~~~g~l~~~~~~~~i~~~~-~~g~---~~-~~~~~---------------------------------------- 47 (173)
.+++++++|.++++..++.|+.|+ .+|+ .. .+...
T Consensus 8 ~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRT 87 (450)
T ss_dssp CEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC---------------------------------------
T ss_pred EEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccccc
Confidence 578999999877776677899988 4665 21 22110
Q ss_pred --------------cCccccceEEccCCcEEEEEeCCCe-EEEEc-c--CC--cEEEEeccCCccccCCccEEEcCCCcE
Q 030700 48 --------------GSQSLLGLTTTKENNVIIVCDSQQG-LLKVS-E--EG--VTVLVSQFNGSQLRFANDVIEASDGSL 107 (173)
Q Consensus 48 --------------~~~p~~gl~~~~~g~l~~v~~~~~~-i~~~~-~--~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~ 107 (173)
..... +++|++++++|+++...++ +..++ . .+ ...+...... ..+..++++|+|..
T Consensus 88 ~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 88 AAKVPSPGLGAPPIYSYIR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFS---KRPNAISIAEDDTT 163 (450)
T ss_dssp ------------CCCCCEE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECS---SCEEEEEECTTSSE
T ss_pred CccccCCCCCCCccCCceE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCC---CCceEEEEcCCCCE
Confidence 01356 8999999998545554433 44344 2 34 3333221111 35688999999975
Q ss_pred EEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE-----EeeccccCcceEEEccC---CCEEEEEe
Q 030700 108 YFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS-----LVLDGLYFANGVALSED---ERFLVVCE 170 (173)
Q Consensus 108 ~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-----~~~~~~~~p~gi~~~~d---g~~lyv~~ 170 (173)
+++-. .++.++.++..+++.. .+.......+.++|+|+ +++|+.+.
T Consensus 164 l~~~~-----------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 217 (450)
T 2vdu_B 164 VIIAD-----------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD 217 (450)
T ss_dssp EEEEE-----------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE
T ss_pred EEEEe-----------------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEc
Confidence 55421 2478888887655432 12222455678999999 87776654
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.55 E-value=2.3e-06 Score=64.88 Aligned_cols=152 Identities=13% Similarity=0.189 Sum_probs=89.1
Q ss_pred EEEcCCCC-EEEEcC-CC--eEEEEcCCC-cEEEeccccC-ccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEe
Q 030700 15 VSVDGNGV-LYTATG-DG--WIKRMHPNG-TWEDWHQVGS-QSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVS 86 (173)
Q Consensus 15 l~~~~~g~-l~~~~~-~~--~i~~~~~~g-~~~~~~~~~~-~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~ 86 (173)
++|.|+|+ |++... ++ .|+.++.++ +...+..... ... ++++++||+.|+++.....++.++. .+ ...+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~-~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF-GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS-SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc-ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 67899885 555443 44 599998654 4444433322 234 6789999988677766667888885 44 444433
Q ss_pred ccCCccccCCccEEEcCCCcEEEEeCcCC--cCc-ccc--eeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEcc
Q 030700 87 QFNGSQLRFANDVIEASDGSLYFTVSSTK--FTP-AEY--YLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSE 161 (173)
Q Consensus 87 ~~~~~~~~~~~~l~~~~dG~~~v~~~~~~--~~~-~~~--~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~ 161 (173)
...+. .......++++|+++++..... ... ..+ ............|+++|.++++.+.+.........++|+|
T Consensus 120 ~~~~~--~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 120 VPAEW--VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp CCTTE--EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred chhhc--ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 22110 1112234588998766421000 000 000 0001122345789999999888877776655667899999
Q ss_pred -CCCEEEEE
Q 030700 162 -DERFLVVC 169 (173)
Q Consensus 162 -dg~~lyv~ 169 (173)
||+.|+++
T Consensus 198 ~dg~~l~~~ 206 (388)
T 3pe7_A 198 YDDSTVAFC 206 (388)
T ss_dssp TEEEEEEEE
T ss_pred CCCCEEEEE
Confidence 99877554
No 176
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.54 E-value=2.9e-06 Score=64.23 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=82.6
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEE-eccccCccccceEEccCCc-EEEEEeCCCe-EEEEcc-CC--cE
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENN-VIIVCDSQQG-LLKVSE-EG--VT 82 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~-l~~v~~~~~~-i~~~~~-~g--~~ 82 (173)
...+++|.|+|.++++. .++.|..||. +++... +........ .++|++++. + +++...++ +...|. .+ ..
T Consensus 129 ~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~-~~~~~~~~~~~-l~s~s~D~~v~iwd~~~~~~~~ 206 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT-CVAASPHKDSV-FLSCSEDNRILLWDTRCPKPAS 206 (344)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSSCTTE-EEEEETTSCEEEEETTSSSCEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE-EEEecCCCCCc-eeeeccccccccccccccceee
Confidence 45789999999766554 8889999995 455433 333445567 899999874 5 54444444 444453 44 33
Q ss_pred EEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCcceEEEc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFANGVALS 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p~gi~~~ 160 (173)
.+.....+ ..+..++++|++ +++++- ..++.|..+|..+++...... .....+.++|+
T Consensus 207 ~~~~~~~~---~~~~~~~~~p~~~~~l~sg-----------------~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fs 266 (344)
T 4gqb_B 207 QIGCSAPG---YLPTSLAWHPQQSEVFVFG-----------------DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFS 266 (344)
T ss_dssp ECC----C---CCEEEEEECSSCTTEEEEE-----------------ETTSEEEEEESCC--CCEEEECCSSCEEEEEEC
T ss_pred eeecceee---ccceeeeecCCCCcceEEe-----------------ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEc
Confidence 32211111 346778999854 566652 234789999988776433333 34556889999
Q ss_pred cCCCEEEE
Q 030700 161 EDERFLVV 168 (173)
Q Consensus 161 ~dg~~lyv 168 (173)
|+++.+++
T Consensus 267 p~g~~~la 274 (344)
T 4gqb_B 267 PHSVPFLA 274 (344)
T ss_dssp SSSSCCEE
T ss_pred cCCCeEEE
Confidence 99854433
No 177
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.54 E-value=4e-06 Score=63.96 Aligned_cols=142 Identities=10% Similarity=0.058 Sum_probs=86.5
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCCC------cEEEeccccCccccceEEccC-CcEEEEEeCCCeEEEEccCC-
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPNG------TWEDWHQVGSQSLLGLTTTKE-NNVIIVCDSQQGLLKVSEEG- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~g------~~~~~~~~~~~p~~gl~~~~~-g~l~~v~~~~~~i~~~~~~g- 80 (173)
....+++|.|++.++ ++..++.|..|+... ....+........ .++++++ +++++.+.....+..++...
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 346789999988655 455788999998543 2333434455667 9999998 78744443333344444322
Q ss_pred c------EEEEeccCCccccCCccEEEcCC-CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc---
Q 030700 81 V------TVLVSQFNGSQLRFANDVIEASD-GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG--- 150 (173)
Q Consensus 81 ~------~~~~~~~~~~~~~~~~~l~~~~d-G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--- 150 (173)
. ..+..............++++|+ +.++++.. .++.|..+|..+++.......
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-----------------~dg~v~iwd~~~~~~~~~~~~~~~ 209 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-----------------SSNFASIWDLKAKKEVIHLSYTSP 209 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-----------------SSSCEEEEETTTTEEEEEECCCCC
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-----------------CCCCEEEEECCCCCcceEEecccc
Confidence 2 21111000111235788999998 56776632 347899999887765544433
Q ss_pred ----ccCcceEEEccCCC-EEEEE
Q 030700 151 ----LYFANGVALSEDER-FLVVC 169 (173)
Q Consensus 151 ----~~~p~gi~~~~dg~-~lyv~ 169 (173)
....+.++|+|+++ .++++
T Consensus 210 ~~~~~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 210 NSGIKQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp SSCCCCCEEEEEECSSCTTEEEEE
T ss_pred ccccCCceEEEEECCCCCCEEEEE
Confidence 34567899999974 44443
No 178
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.54 E-value=1.1e-05 Score=61.40 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=90.6
Q ss_pred CcceEEEcCCCCEE-EEcCCCeEEEEcCCCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEe
Q 030700 11 HPEDVSVDGNGVLY-TATGDGWIKRMHPNGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVS 86 (173)
Q Consensus 11 ~p~~l~~~~~g~l~-~~~~~~~i~~~~~~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~ 86 (173)
...+++|.|+|.++ ++..++.|..|+.+++... +........ .+++++++++++++.....+..++. ++ ......
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 57789999998755 4558889999997776544 333445567 9999999998666655555665564 44 222111
Q ss_pred ccCCcc-----------ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCc
Q 030700 87 QFNGSQ-----------LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFA 154 (173)
Q Consensus 87 ~~~~~~-----------~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p 154 (173)
...... ......+.+.+++.++++. .++.|..+|..+++...... .....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPG------------------PKGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEEC------------------GGGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEc------------------CCCeEEEEEcCCCceeeeeccCCCce
Confidence 111100 0116778888887766553 34789999988765433333 23455
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
..++|+|+++.|+++.
T Consensus 251 ~~~~~~~~~~~l~~~~ 266 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSAS 266 (425)
T ss_dssp EEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEc
Confidence 7899999999877764
No 179
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.53 E-value=2.5e-06 Score=69.23 Aligned_cols=139 Identities=9% Similarity=0.062 Sum_probs=84.8
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcCCC-cEEE--eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CCcEEEE
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHPNG-TWED--WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EGVTVLV 85 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g-~~~~--~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g~~~~~ 85 (173)
.+.++++.|+|.++++. .++.|..|+.++ .... ......... .++|+|+|++|+.+.....+...+. ++.+...
T Consensus 450 ~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~-~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~ 528 (611)
T 1nr0_A 450 NSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEIT-SVAFSNNGAFLVATDQSRKVIPYSVANNFELAH 528 (611)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSCEEEEEGGGTTEESC
T ss_pred CceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceE-EEEECCCCCEEEEEcCCCCEEEEEcCCCCceee
Confidence 35678999999766554 788888888644 3321 123344567 9999999999555554444555553 3122111
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe-eE-Eeec-c-ccCcceEEEcc
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ-TS-LVLD-G-LYFANGVALSE 161 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~-~~~~-~-~~~p~gi~~~~ 161 (173)
....+........++++|||+++++-. .++.|..++.+++. .. .... . ....+.++|+|
T Consensus 529 ~~~~~~H~~~V~~v~fspdg~~lasgs-----------------~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~ 591 (611)
T 1nr0_A 529 TNSWTFHTAKVACVSWSPDNVRLATGS-----------------LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN 591 (611)
T ss_dssp CCCCCCCSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE
T ss_pred eeeeeecccceeEEEECCCCCEEEEEE-----------------CCCcEEEEECCCcccccchhhccCcccCeeEEEEcC
Confidence 101110113568899999999877632 34678888876543 21 2222 2 35567899999
Q ss_pred CCCEEEE
Q 030700 162 DERFLVV 168 (173)
Q Consensus 162 dg~~lyv 168 (173)
|++ |+.
T Consensus 592 d~~-l~s 597 (611)
T 1nr0_A 592 ETT-IVS 597 (611)
T ss_dssp TTE-EEE
T ss_pred CCE-EEE
Confidence 997 544
No 180
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.53 E-value=9.9e-06 Score=62.53 Aligned_cols=140 Identities=11% Similarity=0.130 Sum_probs=89.4
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEccCCcEEEEec
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEGVTVLVSQ 87 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g~~~~~~~ 87 (173)
...+++++|++.++++. .++.|..||. +++.. .+........ .++|++++++|+.+.....+..++..+.+.+. .
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~-~ 187 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIR-T 187 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEE-C
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE-E
Confidence 45689999988776655 8899999985 45433 3333445567 99999999984544444334444443311111 1
Q ss_pred cCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-ccccCcceEEEccCCCEE
Q 030700 88 FNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLYFANGVALSEDERFL 166 (173)
Q Consensus 88 ~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~p~gi~~~~dg~~l 166 (173)
+.+. ......++++|+|..+++- ..++.|..+|..++...... ......+.++++|+++.+
T Consensus 188 ~~~h-~~~V~~v~~~p~~~~l~s~-----------------s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l 249 (410)
T 1vyh_C 188 MHGH-DHNVSSVSIMPNGDHIVSA-----------------SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLI 249 (410)
T ss_dssp CCCC-SSCEEEEEECSSSSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EcCC-CCCEEEEEEeCCCCEEEEE-----------------eCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEE
Confidence 1111 1356789999999877663 23578999998877654333 334456788999999877
Q ss_pred EEEe
Q 030700 167 VVCE 170 (173)
Q Consensus 167 yv~~ 170 (173)
+.+.
T Consensus 250 ~s~s 253 (410)
T 1vyh_C 250 ASCS 253 (410)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6653
No 181
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.53 E-value=1.2e-06 Score=70.52 Aligned_cols=135 Identities=14% Similarity=0.121 Sum_probs=81.1
Q ss_pred CcceEEEcCCC--CEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC----CeEEEEcc-CC-c
Q 030700 11 HPEDVSVDGNG--VLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ----QGLLKVSE-EG-V 81 (173)
Q Consensus 11 ~p~~l~~~~~g--~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~----~~i~~~~~-~g-~ 81 (173)
+....++.|+| .+|++...+.+..|+. +|+...+..... . .++++|||+.++.+... ..++.++. +| .
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 34456777766 3556555556667775 455444433333 6 88999999986644322 34777774 55 5
Q ss_pred EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEE--
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVA-- 158 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~-- 158 (173)
+.+... . .....++++|||+.+++... .....|+++|.++++.. ...+ ...+.+++
T Consensus 188 ~~l~~~-~----~~~~~~~~SpDG~~l~~~~~---------------~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 188 RVFDSG-E----GSFSSASISPGMKVTAGLET---------------AREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp EEECCS-S----CEEEEEEECTTSCEEEEEEC---------------SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred eEeecC-C----CccccceECCCCCEEEEccC---------------CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 554321 1 23478999999985553211 11238999999988877 4433 22334455
Q ss_pred ------EccCCCEEEEE
Q 030700 159 ------LSEDERFLVVC 169 (173)
Q Consensus 159 ------~~~dg~~lyv~ 169 (173)
|+|||+.++.+
T Consensus 247 ~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVA 263 (582)
T ss_dssp EEEEEEECTTSCEEEEE
T ss_pred cccceeEcCCCcEEEEE
Confidence 99999544433
No 182
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.53 E-value=3.9e-05 Score=57.57 Aligned_cols=141 Identities=10% Similarity=0.074 Sum_probs=85.0
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEccCC-cEEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG-VTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g-~~~~~ 85 (173)
....++++.|++.+.++. .++.|..||. +++.. .+........ .++|++++++++.+.....+...+..+ .....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSS 155 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeee
Confidence 345678999988766555 8899999985 45543 3434455667 999999999855554444454445444 22111
Q ss_pred eccCCccccCCccEEEcCCC----------cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE-EeeccccCc
Q 030700 86 SQFNGSQLRFANDVIEASDG----------SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS-LVLDGLYFA 154 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~p 154 (173)
....+ .......++++|++ .++++ ...++.|..+|.. .+.. .+.......
T Consensus 156 ~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~l~s-----------------~~~d~~i~iwd~~-~~~~~~~~~h~~~v 216 (343)
T 2xzm_R 156 AEKEN-HSDWVSCVRYSPIMKSANKVQPFAPYFAS-----------------VGWDGRLKVWNTN-FQIRYTFKAHESNV 216 (343)
T ss_dssp CTTTS-CSSCEEEEEECCCCCSCSCCCSSCCEEEE-----------------EETTSEEEEEETT-TEEEEEEECCSSCE
T ss_pred ecccC-CCceeeeeeeccccccccccCCCCCEEEE-----------------EcCCCEEEEEcCC-CceeEEEcCccccc
Confidence 11111 11245667787776 33333 2245788888854 4333 233334556
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
+.++|+|+|++|..+.
T Consensus 217 ~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 217 NHLSISPNGKYIATGG 232 (343)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred eEEEECCCCCEEEEEc
Confidence 7899999999876653
No 183
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.52 E-value=5.7e-06 Score=62.67 Aligned_cols=136 Identities=12% Similarity=0.063 Sum_probs=86.1
Q ss_pred CCcceEEEcCCC-CEEEEc-CCCeEEEEcC-CCcEE-Eec--cccCccccceEEccC-CcEEEEEeCCCe-EEEEcc-CC
Q 030700 10 NHPEDVSVDGNG-VLYTAT-GDGWIKRMHP-NGTWE-DWH--QVGSQSLLGLTTTKE-NNVIIVCDSQQG-LLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~-~~~~i~~~~~-~g~~~-~~~--~~~~~p~~gl~~~~~-g~l~~v~~~~~~-i~~~~~-~g 80 (173)
....++++.+++ .++++. .++.|..||. .++.. .+. ....... .++++++ +++ +++...++ |..+|. .+
T Consensus 170 ~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~-l~sg~~dg~v~~wd~~~~ 247 (344)
T 4gqb_B 170 AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPT-SLAWHPQQSEV-FVFGDENGTVSLVDTKST 247 (344)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEE-EEEECSSCTTE-EEEEETTSEEEEEESCC-
T ss_pred CceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccce-eeeecCCCCcc-eEEeccCCcEEEEECCCC
Confidence 445688999976 566554 7889999985 44433 221 2233466 8899985 566 55544444 444453 44
Q ss_pred --cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceE
Q 030700 81 --VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGV 157 (173)
Q Consensus 81 --~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi 157 (173)
...+... . ...+.++++|+|. ++++- ..++.|..+|..++++......-...+.+
T Consensus 248 ~~~~~~~~h-~----~~v~~v~fsp~g~~~lasg-----------------s~D~~i~vwd~~~~~~~~~~~H~~~V~~v 305 (344)
T 4gqb_B 248 SCVLSSAVH-S----QCVTGLVFSPHSVPFLASL-----------------SEDCSLAVLDSSLSELFRSQAHRDFVRDA 305 (344)
T ss_dssp -CCEEEECC-S----SCEEEEEECSSSSCCEEEE-----------------ETTSCEEEECTTCCEEEEECCCSSCEEEE
T ss_pred cEEEEEcCC-C----CCEEEEEEccCCCeEEEEE-----------------eCCCeEEEEECCCCcEEEEcCCCCCEEEE
Confidence 4443321 1 3467899999984 55542 23578999999888766554445667899
Q ss_pred EEccCCCEEEEE
Q 030700 158 ALSEDERFLVVC 169 (173)
Q Consensus 158 ~~~~dg~~lyv~ 169 (173)
+|+|+++.|+++
T Consensus 306 ~~sp~~~~llas 317 (344)
T 4gqb_B 306 TWSPLNHSLLTT 317 (344)
T ss_dssp EECSSSTTEEEE
T ss_pred EEeCCCCeEEEE
Confidence 999998866654
No 184
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.52 E-value=1.2e-05 Score=61.20 Aligned_cols=138 Identities=12% Similarity=0.059 Sum_probs=86.7
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcCC-CcE-EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEE
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHPN-GTW-EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~~-g~~-~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~ 84 (173)
....++++.|++.+++ +..++.|..|+.. ++. ..+........ .+++++++ +++.+.....+..++. .+ ....
T Consensus 248 ~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~-~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 248 GPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIV-SASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEE-EEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEE-EEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 4467899999886554 4478899999853 332 33333445567 99999998 5355554445555554 44 2222
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe--------------------e
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ--------------------T 144 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--------------------~ 144 (173)
..... ..+..++++|+|.++++.. .++.|..|+..+++ .
T Consensus 326 ~~~~~----~~i~~~~~s~~~~~l~~~~-----------------~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (425)
T 1r5m_A 326 SIVDG----VPIFAGRISQDGQKYAVAF-----------------MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPL 384 (425)
T ss_dssp EECTT----CCEEEEEECTTSSEEEEEE-----------------TTSCEEEEECHHHHC--------------CEECCE
T ss_pred cccCC----ccEEEEEEcCCCCEEEEEE-----------------CCCeEEEEECCCCccceeeeecccccccCcccchh
Confidence 22111 3567899999998766532 23567777766544 3
Q ss_pred EEeeccc-c--CcceEEEccCCCEEEEEe
Q 030700 145 SLVLDGL-Y--FANGVALSEDERFLVVCE 170 (173)
Q Consensus 145 ~~~~~~~-~--~p~gi~~~~dg~~lyv~~ 170 (173)
....... . ..+.++|+|++++|+++.
T Consensus 385 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 413 (425)
T 1r5m_A 385 YASYQSSQDNDYIFDLSWNCAGNKISVAY 413 (425)
T ss_dssp EEEECCTTCCCCEEEEEECTTSSEEEEEE
T ss_pred hhhhcCcccCCceEEEEccCCCceEEEEe
Confidence 3333322 2 678999999999887764
No 185
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.52 E-value=1.9e-06 Score=65.48 Aligned_cols=136 Identities=14% Similarity=0.053 Sum_probs=80.7
Q ss_pred cceEEEcCCCCEEEEc-C------CCeEEEEcC-CCcEE-----EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc
Q 030700 12 PEDVSVDGNGVLYTAT-G------DGWIKRMHP-NGTWE-----DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE 78 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~-~------~~~i~~~~~-~g~~~-----~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~ 78 (173)
..+++|.|+|.++++. . ++.|+.|+. ++... .......... .++|++++++ +++.....|...+.
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~-l~~s~dg~v~lWd~ 122 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGI-LVASDSGAVELWEI 122 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEE-EEEETTSCEEEC--
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCE-EEEECCCEEEEeec
Confidence 4679999999888765 3 567888863 33211 1112233456 8999999988 55554433433332
Q ss_pred -CC-cE---EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-cc
Q 030700 79 -EG-VT---VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LY 152 (173)
Q Consensus 79 -~g-~~---~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~ 152 (173)
++ .. .+... +. ......++++|+|+++++-. .++.|..+|..+++....... ..
T Consensus 123 ~~~~~~~~~~~~~~--~h-~~~V~~v~~spdg~~l~sgs-----------------~dg~v~iwd~~~~~~~~~~~~h~~ 182 (357)
T 4g56_B 123 LEKESLLVNKFAKY--EH-DDIVKTLSVFSDGTQAVSGG-----------------KDFSVKVWDLSQKAVLKSYNAHSS 182 (357)
T ss_dssp ------CCCCEEEC--CC-SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSS
T ss_pred cccceeEEEeeccC--CC-CCCEEEEEECCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCC
Confidence 33 11 11110 10 13467899999998777632 347888999988876555443 45
Q ss_pred CcceEEEccCCCEEEEE
Q 030700 153 FANGVALSEDERFLVVC 169 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~ 169 (173)
..+.++|+++++.++++
T Consensus 183 ~v~~v~~s~~~~~~~~s 199 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLS 199 (357)
T ss_dssp CEEEEEECTTCSSCEEE
T ss_pred CEEEEEEccCCCceeee
Confidence 56789999987644443
No 186
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.51 E-value=9e-06 Score=63.33 Aligned_cols=138 Identities=13% Similarity=0.123 Sum_probs=89.3
Q ss_pred CCcceEEEcCCCC-EEEEcCCCeEEEEcC-CCcEE-----EeccccCccccceEEccC---CcEEEEEeCCCeEEEEcc-
Q 030700 10 NHPEDVSVDGNGV-LYTATGDGWIKRMHP-NGTWE-----DWHQVGSQSLLGLTTTKE---NNVIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~~~~i~~~~~-~g~~~-----~~~~~~~~p~~gl~~~~~---g~l~~v~~~~~~i~~~~~- 78 (173)
..+.+++|+|+|. |++++.++.|+.++. ++... .+........ .++++++ +++++.+.....|..++.
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~~~~~~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLT-DVHLIKDSDGHQFIITSDRDEHIKISHYP 228 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEE-EEEEEECTTSCEEEEEEETTSCEEEEEES
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceE-EEEEcCCCCCCcEEEEEcCCCcEEEEECC
Confidence 4567899999885 555668899999984 33322 2223345567 9999999 888566655545555553
Q ss_pred CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc------
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG------ 150 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------ 150 (173)
.+ ...+..... ..+..++++ +|.++++.. .++.|..+|..+++.......
T Consensus 229 ~~~~~~~~~~~h~----~~v~~~~~s-d~~~l~s~~-----------------~d~~v~vwd~~~~~~~~~~~~~~~~~~ 286 (450)
T 2vdu_B 229 QCFIVDKWLFGHK----HFVSSICCG-KDYLLLSAG-----------------GDDKIFAWDWKTGKNLSTFDYNSLIKP 286 (450)
T ss_dssp CTTCEEEECCCCS----SCEEEEEEC-STTEEEEEE-----------------SSSEEEEEETTTCCEEEEEECHHHHGG
T ss_pred CCceeeeeecCCC----CceEEEEEC-CCCEEEEEe-----------------CCCeEEEEECCCCcEeeeecchhhhhh
Confidence 44 333221111 356889999 998777632 347899999887764333321
Q ss_pred --------------------ccCcceEEEccCCCEEEEEe
Q 030700 151 --------------------LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 --------------------~~~p~gi~~~~dg~~lyv~~ 170 (173)
-.....|+++|++++|+++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 287 YLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp GCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred hhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 12345799999999998874
No 187
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.51 E-value=1.9e-06 Score=66.18 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=84.7
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCCCc---EEE-ec-------cccCccccc---eEEccCCcEEEEEeC---C---
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPNGT---WED-WH-------QVGSQSLLG---LTTTKENNVIIVCDS---Q--- 70 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~---~~~-~~-------~~~~~p~~g---l~~~~~g~l~~v~~~---~--- 70 (173)
.|+ +...++.+|+... +.++.+|..+. ... +. .....|. | ++++++++.+|++.. +
T Consensus 215 ~P~--~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~-g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 215 QAA--QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSA-GFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp CCE--EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC-SSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred Ccc--ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccC-cceeeEEcCCCCEEEEEeccccCccc
Confidence 455 3333556676666 88999986542 111 11 1223466 6 889999888798754 2
Q ss_pred ---CeEEEEccCCcEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 71 ---QGLLKVSEEGVTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 71 ---~~i~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
.++..+|..-.+.+....-+ ..|++|++++||+ +|+++.. .++.|..+|+.++++..
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~----------------~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSA----------------GTEVLDIYDAASDQDQS 351 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEET----------------TTTEEEEEESSSCEEEE
T ss_pred ccCCCEEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccC----------------CCCeEEEEECCCCcEEE
Confidence 35667775322222222112 2699999999996 8888631 24799999999998877
Q ss_pred eeccccCcceEEEccC
Q 030700 147 VLDGLYFANGVALSED 162 (173)
Q Consensus 147 ~~~~~~~p~gi~~~~d 162 (173)
.......|.+|++.+.
T Consensus 352 ~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 352 SVELDKGPESLSVQNE 367 (368)
T ss_dssp ECCCCSCCCEEECCCC
T ss_pred EEECCCCCCEEEeecC
Confidence 7777889999998653
No 188
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.50 E-value=3e-06 Score=68.15 Aligned_cols=138 Identities=11% Similarity=0.008 Sum_probs=85.5
Q ss_pred CcceEEEcCCCCEEEEcC---CC--eEEEEcC--CCcEEEeccccCccccceEEccCCc-EEEEEeCCCeEEEEcc-CC-
Q 030700 11 HPEDVSVDGNGVLYTATG---DG--WIKRMHP--NGTWEDWHQVGSQSLLGLTTTKENN-VIIVCDSQQGLLKVSE-EG- 80 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~---~~--~i~~~~~--~g~~~~~~~~~~~p~~gl~~~~~g~-l~~v~~~~~~i~~~~~-~g- 80 (173)
....++|+|+..+|.++. +. .|+.++. +|....+.. ..... ..+++++|+ ++|++....++..++. .|
T Consensus 66 ~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~-~~~~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~ 143 (582)
T 3o4h_A 66 SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA-VKPMR-ILSGVDTGEAVVFTGATEDRVALYALDGGG 143 (582)
T ss_dssp EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTT-SCSBE-EEEEEECSSCEEEEEECSSCEEEEEEETTE
T ss_pred ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccC-CCCce-eeeeCCCCCeEEEEecCCCCceEEEccCCc
Confidence 456788888844444443 22 5777877 666554322 22334 557777774 3366655555555564 55
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEc
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALS 160 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~ 160 (173)
...+.... . ..++++|||+.++..... ......|+++|.++++.+.+.......+.++||
T Consensus 144 ~~~l~~~~------~-~~~~~spDG~~la~~~~~-------------~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~S 203 (582)
T 3o4h_A 144 LRELARLP------G-FGFVSDIRGDLIAGLGFF-------------GGGRVSLFTSNLSSGGLRVFDSGEGSFSSASIS 203 (582)
T ss_dssp EEEEEEES------S-CEEEEEEETTEEEEEEEE-------------ETTEEEEEEEETTTCCCEEECCSSCEEEEEEEC
T ss_pred EEEeecCC------C-ceEEECCCCCEEEEEEEc-------------CCCCeEEEEEcCCCCCceEeecCCCccccceEC
Confidence 44444321 1 789999999865532110 012257999999888887776555556889999
Q ss_pred cCCCEEEEEe
Q 030700 161 EDERFLVVCE 170 (173)
Q Consensus 161 ~dg~~lyv~~ 170 (173)
|||+.|+.++
T Consensus 204 pDG~~l~~~~ 213 (582)
T 3o4h_A 204 PGMKVTAGLE 213 (582)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEcc
Confidence 9999998654
No 189
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.49 E-value=1.9e-05 Score=58.80 Aligned_cols=139 Identities=13% Similarity=0.046 Sum_probs=89.1
Q ss_pred CCcceEEEcCCCCEEEEc-CC-----CeEEEEcCC-Cc----EE--------EeccccC--ccccceEEccCCcEEEEEe
Q 030700 10 NHPEDVSVDGNGVLYTAT-GD-----GWIKRMHPN-GT----WE--------DWHQVGS--QSLLGLTTTKENNVIIVCD 68 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~-----~~i~~~~~~-g~----~~--------~~~~~~~--~p~~gl~~~~~g~l~~v~~ 68 (173)
....+++++|++..+++. .+ +.|..|+.. +. .. .+..... ... .+++++++++++++.
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT-VAGWSTKGKYIIAGH 194 (369)
T ss_dssp SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE-EEEECGGGCEEEEEE
T ss_pred CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee-EEEEcCCCCEEEEEc
Confidence 346789999988665444 55 788888732 11 11 1111111 566 899999999866665
Q ss_pred CCCeEEEEcc-C-C-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 69 SQQGLLKVSE-E-G-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 69 ~~~~i~~~~~-~-g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
....+..++. . + ......... .....++++|+|.++++.. .++.|..+|..+++..
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSIDLHE----KSISDMQFSPDLTYFITSS-----------------RDTNSFLVDVSTLQVL 253 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEECCS----SCEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTCCEE
T ss_pred CCCEEEEEECCCCcEeEEEEecCC----CceeEEEECCCCCEEEEec-----------------CCceEEEEECCCCcee
Confidence 5555666664 3 3 221111111 3567899999998666531 3478999999877765
Q ss_pred EeeccccCcceEEEccCCCEEEEEe
Q 030700 146 LVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 146 ~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
...........++|+|+++.++++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~l~~~~ 278 (369)
T 3zwl_B 254 KKYETDCPLNTAVITPLKEFIILGG 278 (369)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEE
T ss_pred eeecCCCCceeEEecCCCceEEEee
Confidence 5555556667899999999888764
No 190
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.48 E-value=2.1e-06 Score=64.85 Aligned_cols=143 Identities=7% Similarity=-0.104 Sum_probs=80.7
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCC-Cc----EEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-CcE
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPN-GT----WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-GVT 82 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~-g~----~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g~~ 82 (173)
....++++.|+|.++ .+..++.|..|+.. ++ ...+........ .+++++++++++.+.....+...+.. +..
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQEND 134 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCccc
Confidence 456789999988654 55578889998853 33 333334455667 99999999885555544434444432 210
Q ss_pred -EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC------------------Ce
Q 030700 83 -VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST------------------NQ 143 (173)
Q Consensus 83 -~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~------------------~~ 143 (173)
.+.....+........++++|+|.++++-. .++.|..+|..+ ++
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-----------------ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-----------------SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEe-----------------CCCEEEEEEEEecccCCCccccccccccchhh
Confidence 011111111124578899999998666532 235676676532 11
Q ss_pred eEEeeccccCcceEEEccCCCEEEEEe
Q 030700 144 TSLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ~~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
...........+.++|+|++++|+.+.
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~~ 224 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYAG 224 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEEE
T ss_pred hhhcccCCceEEEEEECCCCCEEEEEe
Confidence 111112234457899999999777654
No 191
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.46 E-value=1.3e-05 Score=61.33 Aligned_cols=133 Identities=14% Similarity=0.136 Sum_probs=83.7
Q ss_pred EEEcCCCCEEE-EcCCCeEEEEcCC-CcEEEe-ccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEEEecc
Q 030700 15 VSVDGNGVLYT-ATGDGWIKRMHPN-GTWEDW-HQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVLVSQF 88 (173)
Q Consensus 15 l~~~~~g~l~~-~~~~~~i~~~~~~-g~~~~~-~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~~~~~ 88 (173)
.++.+++.+++ +..++.|..|+.. ++.... ........ .+++++++++|+.+.....+..++. ++ ...+.. .
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-h 180 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG-H 180 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC-C
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC-C
Confidence 35667886664 4488899999964 444333 24455667 9999999998555554444555553 44 444421 1
Q ss_pred CCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc------------------
Q 030700 89 NGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG------------------ 150 (173)
Q Consensus 89 ~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------------------ 150 (173)
. .....++++|+|.++++.. .++.|..+|..+++.......
T Consensus 181 ~----~~v~~~~~~~~~~~l~s~~-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (420)
T 3vl1_A 181 R----ATVTDIAIIDRGRNVLSAS-----------------LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTD 239 (420)
T ss_dssp S----SCEEEEEEETTTTEEEEEE-----------------TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCC
T ss_pred C----CcEEEEEEcCCCCEEEEEc-----------------CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCc
Confidence 1 3567899999998666532 346788888877765444332
Q ss_pred -------ccCcceEEEccCCCEEEEEe
Q 030700 151 -------LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 -------~~~p~gi~~~~dg~~lyv~~ 170 (173)
......++|+|+++.|+++.
T Consensus 240 ~~~~~~~~~~v~~~~~s~~~~~l~~~~ 266 (420)
T 3vl1_A 240 RQLHEISTSKKNNLEFGTYGKYVIAGH 266 (420)
T ss_dssp SSCGGGCCCCCCTTCSSCTTEEEEEEE
T ss_pred ceeeecccCcccceEEcCCCCEEEEEc
Confidence 12234577788888777654
No 192
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.46 E-value=4.1e-06 Score=72.03 Aligned_cols=135 Identities=9% Similarity=0.000 Sum_probs=90.4
Q ss_pred CcceEEEc-CCCC-EEEEcCCCeEEEEcCC-CcEEEeccccC-ccccceEEccCCcEEEEEeCCCeEE-EEccCC--cEE
Q 030700 11 HPEDVSVD-GNGV-LYTATGDGWIKRMHPN-GTWEDWHQVGS-QSLLGLTTTKENNVIIVCDSQQGLL-KVSEEG--VTV 83 (173)
Q Consensus 11 ~p~~l~~~-~~g~-l~~~~~~~~i~~~~~~-g~~~~~~~~~~-~p~~gl~~~~~g~l~~v~~~~~~i~-~~~~~g--~~~ 83 (173)
.+.+++|+ |+|. |.+.. .+.|+.++.+ +....+..... ... .++|+ +|+.++++.....++ .++.++ ...
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~ 373 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYV-RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK 373 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEE-EECSS-SEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEE-eeeEc-CCCeEEEEECCCceEEEEECCCCCceE
Confidence 47889999 9985 55444 6789999864 44444444444 566 88899 887656655555677 666544 333
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~d 162 (173)
+. . . ...+..++++|||+.+++.. .++.|+.+|.++++...+..+ ......++||||
T Consensus 374 l~-~-~---~~~~~~~~~SpDG~~la~~~-----------------~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpD 431 (1045)
T 1k32_A 374 FE-E-N---LGNVFAMGVDRNGKFAVVAN-----------------DRFEIMTVDLETGKPTVIERSREAMITDFTISDN 431 (1045)
T ss_dssp CC-C-C---CCSEEEEEECTTSSEEEEEE-----------------TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTT
T ss_pred ec-C-C---ccceeeeEECCCCCEEEEEC-----------------CCCeEEEEECCCCceEEeccCCCCCccceEECCC
Confidence 32 1 1 13567899999998544321 235899999998887777643 344478999999
Q ss_pred CCEEEEEe
Q 030700 163 ERFLVVCE 170 (173)
Q Consensus 163 g~~lyv~~ 170 (173)
|++|+++.
T Consensus 432 G~~la~~~ 439 (1045)
T 1k32_A 432 SRFIAYGF 439 (1045)
T ss_dssp SCEEEEEE
T ss_pred CCeEEEEe
Confidence 99886653
No 193
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.44 E-value=9.4e-06 Score=67.35 Aligned_cols=139 Identities=10% Similarity=0.015 Sum_probs=89.1
Q ss_pred cCCcceEEEcCCCCEE-EEcCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cE
Q 030700 9 VNHPEDVSVDGNGVLY-TATGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VT 82 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~-~~~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~ 82 (173)
-....+++|+|+|.+. ++..++.|..|+. +++... +........ +++|++++++++++.....+..++. ++ ..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4567899999998755 4557889999984 555433 333445567 9999999998565554444555553 45 33
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC-eeEEeec-cccCcceEEEc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-QTSLVLD-GLYFANGVALS 160 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~~~~~~~-~~~~p~gi~~~ 160 (173)
.+. ... .....++++|+|..+++.. .++.|..++.+++ ....... .......++|+
T Consensus 92 ~~~-~~~----~~v~~~~~s~~~~~l~~~~-----------------~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 92 DFE-AHP----DYIRSIAVHPTKPYVLSGS-----------------DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (814)
T ss_dssp EEE-CCS----SCEEEEEECSSSSEEEEEE-----------------TTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEE
T ss_pred EEe-cCC----CCEEEEEEeCCCCEEEEEc-----------------CCCEEEEEECCCCceEEEEEcCCCCcEEEEEEE
Confidence 332 111 3567899999997655421 3467888887655 3333333 34456789999
Q ss_pred c-CCCEEEEEe
Q 030700 161 E-DERFLVVCE 170 (173)
Q Consensus 161 ~-dg~~lyv~~ 170 (173)
| +++.++++.
T Consensus 150 p~~~~~l~~~~ 160 (814)
T 3mkq_A 150 PKDPSTFASGC 160 (814)
T ss_dssp TTEEEEEEEEE
T ss_pred cCCCCEEEEEe
Confidence 9 776666553
No 194
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.44 E-value=6.1e-06 Score=66.63 Aligned_cols=135 Identities=14% Similarity=0.033 Sum_probs=79.9
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeE------------------EEEcCCCcEEEe-----------c-cccCccccceEEc
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWI------------------KRMHPNGTWEDW-----------H-QVGSQSLLGLTTT 58 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i------------------~~~~~~g~~~~~-----------~-~~~~~p~~gl~~~ 58 (173)
.+-.+|+|.|||.++++. .++.| ..+.|+|....+ . ....... +++|+
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~-~vawS 94 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR-VCKPS 94 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE-EEEEC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE-EEEEC
Confidence 457789999999999887 55555 223344421111 0 1123456 99999
Q ss_pred cCCcEEEEEeCCCeEEEEccCC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEE
Q 030700 59 KENNVIIVCDSQQGLLKVSEEG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKY 137 (173)
Q Consensus 59 ~~g~l~~v~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 137 (173)
|+|+++.++.....+..++.++ ...+. .....+-...+.++++|||++.++- ..+|.|..+
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg-----------------s~DGtVkIW 156 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG-----------------NEDGELQFF 156 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEE-----------------ETTSEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEE-----------------cCCCEEEEE
Confidence 9999844444333344444455 33322 1100011357899999999855542 235789899
Q ss_pred cCCCCee--------EEeec----cccCcceEEEccCC
Q 030700 138 DPSTNQT--------SLVLD----GLYFANGVALSEDE 163 (173)
Q Consensus 138 d~~~~~~--------~~~~~----~~~~p~gi~~~~dg 163 (173)
|..++.. ..+.. .......++|+|||
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc
Confidence 9887642 23211 13467789999998
No 195
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.44 E-value=4.2e-05 Score=57.40 Aligned_cols=138 Identities=12% Similarity=-0.017 Sum_probs=82.1
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcCCCcEEE-ec---cccCccccceEEccCC----------cEEEEEeCCCeEE
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHPNGTWED-WH---QVGSQSLLGLTTTKEN----------NVIIVCDSQQGLL 74 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~~g~~~~-~~---~~~~~p~~gl~~~~~g----------~l~~v~~~~~~i~ 74 (173)
....+++++|+|..++ +..++.|..|+..+.... .. ....... .+++++++ .+++.+.....+.
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVS-CVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEE-EEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceee-eeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 3467899999886554 448889999987654332 21 1223455 78888876 5634443333344
Q ss_pred EEccCC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC-CeeEEeecccc
Q 030700 75 KVSEEG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST-NQTSLVLDGLY 152 (173)
Q Consensus 75 ~~~~~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~ 152 (173)
..+..+ ......... .....++++|+|+++++- ..++.|..+|..+ ...........
T Consensus 198 iwd~~~~~~~~~~~h~----~~v~~~~~s~~g~~l~sg-----------------s~dg~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 2xzm_R 198 VWNTNFQIRYTFKAHE----SNVNHLSISPNGKYIATG-----------------GKDKKLLIWDILNLTYPQREFDAGS 256 (343)
T ss_dssp EEETTTEEEEEEECCS----SCEEEEEECTTSSEEEEE-----------------ETTCEEEEEESSCCSSCSEEEECSS
T ss_pred EEcCCCceeEEEcCcc----ccceEEEECCCCCEEEEE-----------------cCCCeEEEEECCCCcccceeecCCC
Confidence 444444 222111111 356789999999877763 2347888888732 22222221223
Q ss_pred CcceEEEccCCCEEEEE
Q 030700 153 FANGVALSEDERFLVVC 169 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~ 169 (173)
..+.++|+|+++++.++
T Consensus 257 ~v~~v~~sp~~~~la~~ 273 (343)
T 2xzm_R 257 TINQIAFNPKLQWVAVG 273 (343)
T ss_dssp CEEEEEECSSSCEEEEE
T ss_pred cEEEEEECCCCCEEEEE
Confidence 46789999999877654
No 196
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.44 E-value=3.4e-05 Score=57.48 Aligned_cols=144 Identities=12% Similarity=0.081 Sum_probs=90.7
Q ss_pred ecCCccCCcceEEEcCC---C--CEEEEcCCCeEEEEcCC-Cc-EEEecc-----ccCccccceEEccC----CcEEEEE
Q 030700 4 LGEGIVNHPEDVSVDGN---G--VLYTATGDGWIKRMHPN-GT-WEDWHQ-----VGSQSLLGLTTTKE----NNVIIVC 67 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~---g--~l~~~~~~~~i~~~~~~-g~-~~~~~~-----~~~~p~~gl~~~~~----g~l~~v~ 67 (173)
+..+--....++++.|+ + .++++..++.|..|+.. ++ +..+.. ...... .++++++ |++++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEEEe
Confidence 33344456788999973 3 36666666788888853 43 222211 223456 8999988 6674555
Q ss_pred eCCCeEEEEcc-CC--cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 68 DSQQGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 68 ~~~~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
.....+..++. ++ ...+. ... .....++++| ++.++++-. .++.|..+|..+++
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~-~~~----~~i~~~~~~~~~~~~l~s~~-----------------~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYV-GHG----NAINELKFHPRDPNLLLSVS-----------------KDHALRLWNIQTDT 149 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEE-SCC----SCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTTTE
T ss_pred cCCCEEEEEEchhceEeeeec-CCC----CcEEEEEECCCCCCEEEEEe-----------------CCCeEEEEEeecCe
Confidence 54444555553 44 33332 111 3568899999 888766632 34789999988777
Q ss_pred eEEee----ccccCcceEEEccCCCEEEEEe
Q 030700 144 TSLVL----DGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ~~~~~----~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
..... ........++|+|+++.|+.+.
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEecccccccCceeEEEECCCCCEEEEec
Confidence 65554 2345567899999999887764
No 197
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.44 E-value=6.4e-05 Score=57.43 Aligned_cols=144 Identities=9% Similarity=0.072 Sum_probs=88.6
Q ss_pred cCCcceEEEcCCCCEEE-EcCCCeEEEEcC-CCcE-EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cE
Q 030700 9 VNHPEDVSVDGNGVLYT-ATGDGWIKRMHP-NGTW-EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VT 82 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~-~~~~~~i~~~~~-~g~~-~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~ 82 (173)
.....+++++|++.+++ +..++.|..|+. +++. ..+........ .+++++++++++.+.....+..++. .+ ..
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVT-DIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 35677899999887554 448899999985 3443 33434455667 9999999998555544444555553 44 23
Q ss_pred EEEeccCC-c------------------cccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 83 VLVSQFNG-S------------------QLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 83 ~~~~~~~~-~------------------~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
.+...... . .......++++|+|+++++- ..++.|..+|..+++
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-----------------~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAG-----------------HVSGVITVHNVFSKE 280 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEE-----------------ETTSCEEEEETTTCC
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEE-----------------cCCCeEEEEECCCCc
Confidence 32211000 0 01234556777888755542 234789999988765
Q ss_pred eEEee-cc-ccCcceEEEccCCC-EEEEEe
Q 030700 144 TSLVL-DG-LYFANGVALSEDER-FLVVCE 170 (173)
Q Consensus 144 ~~~~~-~~-~~~p~gi~~~~dg~-~lyv~~ 170 (173)
..... .. ......++|+|+++ .|+.+.
T Consensus 281 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~ 310 (420)
T 3vl1_A 281 QTIQLPSKFTCSCNSLTVDGNNANYIYAGY 310 (420)
T ss_dssp EEEEECCTTSSCEEEEEECSSCTTEEEEEE
T ss_pred eeEEcccccCCCceeEEEeCCCCCEEEEEe
Confidence 43333 22 34567899999998 676654
No 198
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.43 E-value=4.3e-05 Score=55.72 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=86.9
Q ss_pred CCcceEEEcC-CCCEE-EEcCCCeEEEEcCCCcEEEecc-ccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 10 NHPEDVSVDG-NGVLY-TATGDGWIKRMHPNGTWEDWHQ-VGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~-~g~l~-~~~~~~~i~~~~~~g~~~~~~~-~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
.....+++.+ ++.++ ++..++.|..|+.......+.. ...... .+++++++++ +++.....+..++. ++ ...
T Consensus 143 ~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~~-~~~~~dg~i~i~d~~~~~~~~~ 220 (313)
T 3odt_A 143 ASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVR-HLAVVDDGHF-ISCSNDGLIKLVDMHTGDVLRT 220 (313)
T ss_dssp SCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEE-EEEEEETTEE-EEEETTSEEEEEETTTCCEEEE
T ss_pred CceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEE-EEEEcCCCeE-EEccCCCeEEEEECCchhhhhh
Confidence 4456777777 66544 5558889999984333444433 444566 8999999885 76665555666664 45 333
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~d 162 (173)
+. ... .....++++|+|.++.+. .++.|..+|..+++....... ......++|+|+
T Consensus 221 ~~-~~~----~~i~~~~~~~~~~l~~~~------------------~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 221 YE-GHE----SFVYCIKLLPNGDIVSCG------------------EDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EE-CCS----SCEEEEEECTTSCEEEEE------------------TTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred hh-cCC----ceEEEEEEecCCCEEEEe------------------cCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 32 111 356789999999766553 347899999887765444433 345678999999
Q ss_pred CCEEE
Q 030700 163 ERFLV 167 (173)
Q Consensus 163 g~~ly 167 (173)
++.+.
T Consensus 278 ~~~~~ 282 (313)
T 3odt_A 278 GDIIV 282 (313)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 98443
No 199
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.43 E-value=1.9e-05 Score=60.87 Aligned_cols=145 Identities=10% Similarity=0.077 Sum_probs=86.0
Q ss_pred CCccCCcceEEEcCCCCEEEEcCCCeEEEEcCC--CcEEE--------eccccCccccceEEccCC-cEEEEEeCCCeEE
Q 030700 6 EGIVNHPEDVSVDGNGVLYTATGDGWIKRMHPN--GTWED--------WHQVGSQSLLGLTTTKEN-NVIIVCDSQQGLL 74 (173)
Q Consensus 6 ~~~~~~p~~l~~~~~g~l~~~~~~~~i~~~~~~--g~~~~--------~~~~~~~p~~gl~~~~~g-~l~~v~~~~~~i~ 74 (173)
.+.-....++++.|+|.++++..++.|..|+.. +.... +........ .+++++++ ++++.+.....+.
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-AAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-EEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceE-EEEECCCCCcEEEEEeCCCeEE
Confidence 333455778999999987766678899999865 22222 112334567 99999998 8845554444455
Q ss_pred EEcc-CC-c----EEEEeccCCc-c-------ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCC
Q 030700 75 KVSE-EG-V----TVLVSQFNGS-Q-------LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS 140 (173)
Q Consensus 75 ~~~~-~g-~----~~~~~~~~~~-~-------~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 140 (173)
.++. .+ . .......... . ......++++|+|.++++.. . +.|..+|..
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-----------------~-~~v~iwd~~ 314 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-----------------Y-LSVKVWDLN 314 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-----------------S-SEEEEEETT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-----------------C-CeEEEEeCC
Confidence 5553 33 2 1222211100 0 01567899999998777631 2 688888886
Q ss_pred C-CeeEEeeccccC----------------cceEEEccCCCEEEEE
Q 030700 141 T-NQTSLVLDGLYF----------------ANGVALSEDERFLVVC 169 (173)
Q Consensus 141 ~-~~~~~~~~~~~~----------------p~gi~~~~dg~~lyv~ 169 (173)
+ +++......... ...++|+|++++|+.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~ 360 (447)
T 3dw8_B 315 MENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTG 360 (447)
T ss_dssp CCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEE
T ss_pred CCccccceeeccccccccccccccccccccceEEEECCCCCEEEEe
Confidence 4 433222222111 1238999999987654
No 200
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.43 E-value=6.4e-06 Score=66.86 Aligned_cols=136 Identities=14% Similarity=0.156 Sum_probs=83.1
Q ss_pred CcceEEEcCCCCEEEEc-CC----CeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEE-cc-CC-c-
Q 030700 11 HPEDVSVDGNGVLYTAT-GD----GWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKV-SE-EG-V- 81 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~----~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~-~~-~g-~- 81 (173)
...+++|+|+|..+++. .+ +.|+.|+.......+........ .++|+|++...+++...++.+++ +. .+ .
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~-~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~ 183 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMN-SVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK 183 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEE-EEEECSSSSCEEEEEETTSCEEEEETTTBEEE
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCce-EEEECCCCCeEEEEEeCCCeEEEEECCCCeEe
Confidence 45689999988766443 22 46777763222223333344567 99999998632444444444444 43 33 2
Q ss_pred EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee--------ccccC
Q 030700 82 TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL--------DGLYF 153 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~--------~~~~~ 153 (173)
..+ .+. ......++++|||.++++-. .++.|..+|..+++..... .....
T Consensus 184 ~~l----~~H-~~~V~~v~fspdg~~las~s-----------------~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~ 241 (611)
T 1nr0_A 184 STF----GEH-TKFVHSVRYNPDGSLFASTG-----------------GDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 241 (611)
T ss_dssp EEE----CCC-SSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEECBCTTSSSCSSSSC
T ss_pred eee----ccc-cCceEEEEECCCCCEEEEEE-----------------CCCcEEEEECCCCcEeeeeccccccccccCCC
Confidence 222 111 13578899999999877632 3578888998777654433 12345
Q ss_pred cceEEEccCCCEEEEE
Q 030700 154 ANGVALSEDERFLVVC 169 (173)
Q Consensus 154 p~gi~~~~dg~~lyv~ 169 (173)
...++|+||+++|+.+
T Consensus 242 V~~v~~spdg~~l~s~ 257 (611)
T 1nr0_A 242 VFGLTWSPDGTKIASA 257 (611)
T ss_dssp EEEEEECTTSSEEEEE
T ss_pred EEEEEECCCCCEEEEE
Confidence 6789999999977654
No 201
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.42 E-value=4.9e-06 Score=67.78 Aligned_cols=142 Identities=15% Similarity=0.077 Sum_probs=86.1
Q ss_pred eEEEc--CCC-C-EEEEc-CCCeEEEEcCC----CcEEEecc-----ccCccccceEEccCCcEEEEEeCC---------
Q 030700 14 DVSVD--GNG-V-LYTAT-GDGWIKRMHPN----GTWEDWHQ-----VGSQSLLGLTTTKENNVIIVCDSQ--------- 70 (173)
Q Consensus 14 ~l~~~--~~g-~-l~~~~-~~~~i~~~~~~----g~~~~~~~-----~~~~p~~gl~~~~~g~l~~v~~~~--------- 70 (173)
.+++. |+| . |+++. .+..|+.++.+ +....+.. ...... .++|++||+.|+++...
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCc
Confidence 34454 777 5 56665 56789999977 55555443 234567 89999999875655432
Q ss_pred -CeEEEEcc-C------C-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCC
Q 030700 71 -QGLLKVSE-E------G-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPS 140 (173)
Q Consensus 71 -~~i~~~~~-~------g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 140 (173)
..|+.++. . + ...+.. .+. .....++++|||+ |+++.... .. . ......|+.+|.+
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~--~~~--~~~~~~~~SpDG~~la~~~~~~-~~-~--------~~~~~~i~~~d~~ 225 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSD--DAH--RFVTGPRLSPDGRQAVWLAWDH-PR-M--------PWEGTELKTARVT 225 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSC--SCS--SEECCCEECTTSSEEEEEEECT-TC-C--------TTTCEEEEEEEEC
T ss_pred eeEEEEEECCCCccccCCceeEEEe--cCC--CcccCceECCCCCEEEEEECCC-CC-C--------CCCCcEEEEEEEC
Confidence 25777774 4 5 333320 111 2456789999997 55543210 00 0 0022579999988
Q ss_pred -CC---eeEEeecc-ccCcceEEEccCCCEEEEEe
Q 030700 141 -TN---QTSLVLDG-LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 141 -~~---~~~~~~~~-~~~p~gi~~~~dg~~lyv~~ 170 (173)
++ +.+.+..+ ......++|+|||+.+|+++
T Consensus 226 ~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 226 EDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp TTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred CCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 46 55555544 35667899999999555554
No 202
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.41 E-value=2.4e-05 Score=58.33 Aligned_cols=67 Identities=13% Similarity=-0.014 Sum_probs=45.1
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCC-CcEEEeccccCccccceEE--ccCCcEEEEEeCCCeEEEEc
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPN-GTWEDWHQVGSQSLLGLTT--TKENNVIIVCDSQQGLLKVS 77 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~--~~~g~l~~v~~~~~~i~~~~ 77 (173)
....++++.|++.++ .+..++.|..|+.. ++............ .+++ ++++++++.+.....+..++
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd 157 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWD 157 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEEC
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEE
Confidence 456789999988655 45588999999864 45444444455667 8999 88988755554444444444
No 203
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.39 E-value=4e-06 Score=63.35 Aligned_cols=140 Identities=10% Similarity=0.016 Sum_probs=83.1
Q ss_pred CCcceEEEcCCCC-EEEEcCCCeEEEEcCCC-c----EEEecc-ccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-
Q 030700 10 NHPEDVSVDGNGV-LYTATGDGWIKRMHPNG-T----WEDWHQ-VGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~~~~i~~~~~~g-~----~~~~~~-~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g- 80 (173)
....++++.|++. |+++..++.|..|+.+. + ...+.. ...... .+++++++++++.+.....+..++.. +
T Consensus 101 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 179 (377)
T 3dwl_C 101 RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL-SLDWHPNNVLLAAGCADRKAYVLSAYVRD 179 (377)
T ss_dssp SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE-EEEECTTSSEEEEEESSSCEEEEEECCSS
T ss_pred CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE-EEEEcCCCCEEEEEeCCCEEEEEEEEecc
Confidence 4567899999885 44555788898888543 2 233333 445567 99999999985555444444444421 1
Q ss_pred ---------------cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee-
Q 030700 81 ---------------VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT- 144 (173)
Q Consensus 81 ---------------~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~- 144 (173)
.......+ + .......++++|+|.++++-. .++.|..+|..+++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~-----------------~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 180 VDAKPEASVWGSRLPFNTVCAEY-P-SGGWVHAVGFSPSGNALAYAG-----------------HDSSVTIAYPSAPEQP 240 (377)
T ss_dssp CC-CCCSCSSCSCCCEEEEEECC-C-CSSSEEEEEECTTSSCEEEEE-----------------TTTEEC-CEECSTTSC
T ss_pred cCCCccccccccccchhhhhhcc-c-CCceEEEEEECCCCCEEEEEe-----------------CCCcEEEEECCCCCCc
Confidence 01111112 1 113567899999998655521 346777777766543
Q ss_pred ----EEeeccccCcceEEEccCCCEEEEE
Q 030700 145 ----SLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 145 ----~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
..+.........++|+|++++|..+
T Consensus 241 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 241 PRALITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEECCCEECSSSCEEEEEEEETTEEEEEE
T ss_pred ceeeEeecCCCCceEEEEEcCCCCEEEEE
Confidence 2222223445789999999877654
No 204
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.38 E-value=5.3e-05 Score=57.99 Aligned_cols=139 Identities=11% Similarity=0.052 Sum_probs=88.8
Q ss_pred CCcceEEEcCCCCEEEE-cCCCeEEEEcCC-CcEE-EeccccCccccceEEccCCcEEEEEeC--CC-eEEEEcc-CC--
Q 030700 10 NHPEDVSVDGNGVLYTA-TGDGWIKRMHPN-GTWE-DWHQVGSQSLLGLTTTKENNVIIVCDS--QQ-GLLKVSE-EG-- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~-~~~~~i~~~~~~-g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~--~~-~i~~~~~-~g-- 80 (173)
....++++.|++.++++ ..++.|..||.. ++.. .+........ .+++++++..++++.. .+ .+..++. ++
T Consensus 218 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~-~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 218 SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVK-AVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCC-EEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEE-EEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 45678999998876654 478999999854 4433 3334455667 9999997654365543 23 4555553 45
Q ss_pred cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee---ccccCcceE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL---DGLYFANGV 157 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~---~~~~~p~gi 157 (173)
...+. . . .....++++|+|..+++..+ ..++.|..++..+++..... ........+
T Consensus 297 ~~~~~-~--~---~~v~~~~~s~~~~~l~~~~g---------------~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~ 355 (401)
T 4aez_A 297 VNTVD-A--G---SQVTSLIWSPHSKEIMSTHG---------------FPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYS 355 (401)
T ss_dssp EEEEE-C--S---SCEEEEEECSSSSEEEEEEC---------------TTTCEEEEEEEETTEEEEEEEEECCSSCCCEE
T ss_pred EEEEe-C--C---CcEEEEEECCCCCeEEEEee---------------cCCCcEEEEecCCccceeEEEecCCCCCEEEE
Confidence 33332 1 1 35688999999986665311 13467888887765544332 234556789
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|++++|+.+.
T Consensus 356 ~~s~dg~~l~s~~ 368 (401)
T 4aez_A 356 ALSPDGRILSTAA 368 (401)
T ss_dssp EECTTSSEEEEEC
T ss_pred EECCCCCEEEEEe
Confidence 9999999887653
No 205
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.38 E-value=4.4e-05 Score=57.17 Aligned_cols=142 Identities=14% Similarity=0.051 Sum_probs=85.2
Q ss_pred CCcceEEEcCC--CCEE-EEcCCCeEEEEcCCCc----EEEeccccCccccceEEcc-------------CCcEEEEEeC
Q 030700 10 NHPEDVSVDGN--GVLY-TATGDGWIKRMHPNGT----WEDWHQVGSQSLLGLTTTK-------------ENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~-~~~~~~~i~~~~~~g~----~~~~~~~~~~p~~gl~~~~-------------~g~l~~v~~~ 69 (173)
....++++.|+ +.++ ++..++.|..|+.... ...+........ .+++++ ++++++++..
T Consensus 102 ~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 180 (379)
T 3jrp_A 102 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGA 180 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEE-EEEECCCC----------CTTCEEEEEET
T ss_pred cceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceE-EEEEcCccccccccccCCCCCCEEEEEeC
Confidence 45788999997 7655 4558889999985332 222323344556 899998 6888455544
Q ss_pred CCeEEEEcc-CC--cEEEEeccCCccccCCccEEEcCC---CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 70 QQGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEASD---GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 70 ~~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~d---G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
...+..++. .+ ...+.....+. ......++++|+ |.++++.. .++.|..||..++.
T Consensus 181 dg~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~l~s~~-----------------~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 181 DNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVS-----------------QDRTCIIWTQDNEQ 242 (379)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEE-----------------TTSCEEEEEESSTT
T ss_pred CCeEEEEEecCCCcceeeEEEEecc-cCcEeEEEECCCCCCCCeEEEEe-----------------CCCEEEEEeCCCCC
Confidence 444555553 33 22222222221 135678999999 77666532 34677777776542
Q ss_pred ---eEEeec---cccCcceEEEccCCCEEEEEe
Q 030700 144 ---TSLVLD---GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ---~~~~~~---~~~~p~gi~~~~dg~~lyv~~ 170 (173)
...... .......++|+|++++|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 222222 234457899999999887754
No 206
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=98.38 E-value=2.4e-05 Score=65.09 Aligned_cols=136 Identities=18% Similarity=0.194 Sum_probs=88.8
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEecc--c-----cCccccceEEccCCcEEEEEeCCCeEEEEccCC---
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQ--V-----GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--- 80 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~--~-----~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--- 80 (173)
..+++.|++|.||++.. +.|.++++. ++...+.. . ..... .|..|++|++ |++....++.+++...
T Consensus 375 v~~i~~d~~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~l-WigT~~~Gl~~~~~~~~~~ 451 (758)
T 3ott_A 375 IRHIYEDKEQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQL-WISTCLGGIFVVDKHKLMQ 451 (758)
T ss_dssp EEEEEECTTSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEE-EEEESSSCEEEEEHHHHHH
T ss_pred eEEEEECCCCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCE-EEEECCCceEEEccccccc
Confidence 46788888999999874 589999965 44444321 1 12345 6788889998 9887667899988431
Q ss_pred --cEEEE-----eccCCccccCCccEEEcCCCcEEE--EeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-
Q 030700 81 --VTVLV-----SQFNGSQLRFANDVIEASDGSLYF--TVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG- 150 (173)
Q Consensus 81 --~~~~~-----~~~~~~~~~~~~~l~~~~dG~~~v--~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~- 150 (173)
...+. ....+.+......|..|++|++|+ +. .+.|+++|+++++.+.....
T Consensus 452 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t-------------------~~Gl~~~d~~~~~~~~~~~~~ 512 (758)
T 3ott_A 452 STSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYN-------------------NKGIDKINPRTREVTKLFADE 512 (758)
T ss_dssp CCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETT-------------------CSSEEEEETTTTEEEEECTTT
T ss_pred cCCcceecccccccccccccceeeeEEEcCCCCEEEEccC-------------------CCCcEEEeCCCCceEEecCCC
Confidence 01121 111222223467789999999999 42 14699999988877665321
Q ss_pred ---ccCcceEEEccCCCEEEEEe
Q 030700 151 ---LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 ---~~~p~gi~~~~dg~~lyv~~ 170 (173)
...++.+..+.+|+ ||++.
T Consensus 513 ~~~~~~~~~i~~d~~g~-lWigt 534 (758)
T 3ott_A 513 LTGEKSPNYLLCDEDGL-LWVGF 534 (758)
T ss_dssp SCGGGCEEEEEECTTSC-EEEEE
T ss_pred cCCCcccceEEECCCCC-EEEEe
Confidence 13456788788886 66653
No 207
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.37 E-value=9.4e-05 Score=54.98 Aligned_cols=138 Identities=12% Similarity=0.148 Sum_probs=85.7
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~~ 84 (173)
....++++.++|.++++. .++.|..||. +++.. .+........ .+++++++++++.+.....+...+..+ ...+
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATL 144 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 345678999998766544 8899999995 55543 3434445567 999999999844444333344444455 3333
Q ss_pred EeccCCccccCCccEEEcCC------CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceE
Q 030700 85 VSQFNGSQLRFANDVIEASD------GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGV 157 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~d------G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi 157 (173)
... . .....+.+.|+ +.++++. ..++.|..+|..+.+......+ ....+.+
T Consensus 145 ~~h-~----~~v~~~~~~~~~~~~~~~~~l~s~-----------------~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 202 (319)
T 3frx_A 145 LGH-N----DWVSQVRVVPNEKADDDSVTIISA-----------------GNDKMVKAWNLNQFQIEADFIGHNSNINTL 202 (319)
T ss_dssp CCC-S----SCEEEEEECCC------CCEEEEE-----------------ETTSCEEEEETTTTEEEEEECCCCSCEEEE
T ss_pred ecc-C----CcEEEEEEccCCCCCCCccEEEEE-----------------eCCCEEEEEECCcchhheeecCCCCcEEEE
Confidence 211 1 23455666664 3344442 2457888899887765444433 4556789
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|++++|+.+.
T Consensus 203 ~~sp~g~~l~s~~ 215 (319)
T 3frx_A 203 TASPDGTLIASAG 215 (319)
T ss_dssp EECTTSSEEEEEE
T ss_pred EEcCCCCEEEEEe
Confidence 9999999777653
No 208
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.37 E-value=6.7e-05 Score=57.83 Aligned_cols=131 Identities=15% Similarity=0.181 Sum_probs=83.4
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCCC-cEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cE
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNG-TWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VT 82 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g-~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~ 82 (173)
.....+++++|+|.++++. .++.|..||..+ +... +........ .+++++++++++.+.....+..++. .+ ..
T Consensus 150 ~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~ 228 (410)
T 1vyh_C 150 TDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK 228 (410)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3456789999998766555 888888888643 4333 333344566 9999999998444444444444453 55 33
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEcc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSE 161 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~ 161 (173)
.+... . .....+.++++|.++++.. .++.|..+|..+++......+ ....+.++|+|
T Consensus 229 ~~~~h-~----~~v~~~~~~~~g~~l~s~s-----------------~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~ 286 (410)
T 1vyh_C 229 TFTGH-R----EWVRMVRPNQDGTLIASCS-----------------NDQTVRVWVVATKECKAELREHRHVVECISWAP 286 (410)
T ss_dssp EEECC-S----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECC
T ss_pred EEeCC-C----ccEEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCceeeEecCCCceEEEEEEcC
Confidence 33211 1 3457789999998777632 346888888877665444433 34456788887
Q ss_pred C
Q 030700 162 D 162 (173)
Q Consensus 162 d 162 (173)
+
T Consensus 287 ~ 287 (410)
T 1vyh_C 287 E 287 (410)
T ss_dssp S
T ss_pred c
Confidence 5
No 209
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.37 E-value=3.7e-05 Score=59.14 Aligned_cols=143 Identities=9% Similarity=0.002 Sum_probs=85.3
Q ss_pred CCcceEEEcCCC-CEEEEc-CCCeEEEEcC-CCcE-----EEeccccC------------ccccceEEccCCcEEEEEeC
Q 030700 10 NHPEDVSVDGNG-VLYTAT-GDGWIKRMHP-NGTW-----EDWHQVGS------------QSLLGLTTTKENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~-~~~~i~~~~~-~g~~-----~~~~~~~~------------~p~~gl~~~~~g~l~~v~~~ 69 (173)
....+++++|++ .++++. .++.|..||. .++. ..+..... ... .++++++|++|+.+..
T Consensus 227 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 227 EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSIS-DVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEE-EEEECTTSSEEEEEES
T ss_pred cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEE-EEEECCCCCEEEEeeC
Confidence 346789999987 666544 8889999984 3432 33322222 456 9999999999555554
Q ss_pred CCeEEEEcc-C-C--cEEEEeccC--C--------ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEE
Q 030700 70 QQGLLKVSE-E-G--VTVLVSQFN--G--------SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLL 135 (173)
Q Consensus 70 ~~~i~~~~~-~-g--~~~~~~~~~--~--------~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~ 135 (173)
..+..++. . + ...+..... . ........++++|+|..+++-. .++.|.
T Consensus 306 -~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s-----------------~dg~v~ 367 (447)
T 3dw8_B 306 -LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS-----------------YNNFFR 367 (447)
T ss_dssp -SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC-----------------STTEEE
T ss_pred -CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec-----------------cCCEEE
Confidence 44555553 2 4 333321100 0 0000122399999998766632 347888
Q ss_pred EEcCCCCeeEEeecc---------------------------------ccCcceEEEccCCCEEEEEec
Q 030700 136 KYDPSTNQTSLVLDG---------------------------------LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 136 ~~d~~~~~~~~~~~~---------------------------------~~~p~gi~~~~dg~~lyv~~~ 171 (173)
.||..+++...+... ......++|+|+++.|.++.+
T Consensus 368 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~ 436 (447)
T 3dw8_B 368 MFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATT 436 (447)
T ss_dssp EEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECS
T ss_pred EEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEec
Confidence 888877665332211 012346999999998887654
No 210
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.36 E-value=6.6e-06 Score=61.27 Aligned_cols=133 Identities=12% Similarity=0.009 Sum_probs=77.2
Q ss_pred EcCCCCEEE-EcCCCeEEEEcCC-CcEEEeccccCccccceEEcc---CCcEEEEEeCCCeEEEEcc-CC--cEEEE-ec
Q 030700 17 VDGNGVLYT-ATGDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTK---ENNVIIVCDSQQGLLKVSE-EG--VTVLV-SQ 87 (173)
Q Consensus 17 ~~~~g~l~~-~~~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~---~g~l~~v~~~~~~i~~~~~-~g--~~~~~-~~ 87 (173)
+++++.+++ +..++.|..|+.. ++............ .+++++ ++++++++.....+..++. .+ ...+. ..
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 254 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVC-SLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVS 254 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceE-EEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeec
Confidence 567886665 4478899999964 44433333445667 999998 8888566655555555552 33 22221 00
Q ss_pred cCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe--------------------eEE
Q 030700 88 FNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ--------------------TSL 146 (173)
Q Consensus 88 ~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--------------------~~~ 146 (173)
..+. ......++++|+|. ++++-. .++.|..+|..++. +..
T Consensus 255 ~~~~-~~~v~~~~~~~~~~~~l~~~~-----------------~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 316 (357)
T 3i2n_A 255 EKAH-KSTVWQVRHLPQNRELFLTAG-----------------GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQN 316 (357)
T ss_dssp EECC-SSCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEE
T ss_pred cCCC-cCCEEEEEECCCCCcEEEEEe-----------------CCCcEEEeecCCCcccccccCCCCccccccccceeec
Confidence 0011 13567899999997 555522 23566666654321 111
Q ss_pred eeccccCcceEEEccCCCEEEE
Q 030700 147 VLDGLYFANGVALSEDERFLVV 168 (173)
Q Consensus 147 ~~~~~~~p~gi~~~~dg~~lyv 168 (173)
+.........++|+|+++.|++
T Consensus 317 ~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 317 VTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp EECCSSCEEEEEECSSSTTEEE
T ss_pred cccCCCCeeEEEEcCCCCeEEE
Confidence 2222345578999999998875
No 211
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.35 E-value=0.00012 Score=55.20 Aligned_cols=136 Identities=18% Similarity=0.220 Sum_probs=85.2
Q ss_pred cceEEEcCCCC-EEEEcCCCeEEEEcC-CCcEE-EeccccCccccceEEcc--CCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 12 PEDVSVDGNGV-LYTATGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTK--ENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 12 p~~l~~~~~g~-l~~~~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~--~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
..++++.+++. |+.+..++.|..||. +++.. .+........ .+++++ +|++++.+.....+..++. .+ ...
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 45788888875 555558899999995 45543 3333344455 777765 5677455544444555553 45 333
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc---ccCcceEEEc
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG---LYFANGVALS 160 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~p~gi~~~ 160 (173)
+. ... ...+.++++|+|.++++-. .++.|..+|..+++....... ......++|+
T Consensus 236 ~~-~h~----~~v~~v~~~p~~~~l~s~s-----------------~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 236 FE-THE----SDVNSVRYYPSGDAFASGS-----------------DDATCRLYDLRADREVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp EC-CCS----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred ec-CCC----CCeEEEEEeCCCCEEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEe
Confidence 31 111 3567899999998777632 347888888876654333322 1235689999
Q ss_pred cCCCEEEEEe
Q 030700 161 EDERFLVVCE 170 (173)
Q Consensus 161 ~dg~~lyv~~ 170 (173)
|++++|+++.
T Consensus 294 ~~g~~l~~g~ 303 (354)
T 2pbi_B 294 LSGRLLFAGY 303 (354)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 9999887754
No 212
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.35 E-value=7.5e-05 Score=61.36 Aligned_cols=142 Identities=14% Similarity=0.128 Sum_probs=89.3
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~~ 84 (173)
....+++++|+|.++++. .++.|..||. ++... .+..+..... .+++++++++++.+.....+...+..+ ...+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 345679999998766554 8899999995 44433 3334455567 999999998844444333344444444 2222
Q ss_pred EeccCCccccCCccEEEcCCC--cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEcc
Q 030700 85 VSQFNGSQLRFANDVIEASDG--SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSE 161 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG--~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~ 161 (173)
.....+. ......++++|++ .++++. ..++.|..+|..+++......+ ....+.++|+|
T Consensus 510 ~~~~~~h-~~~v~~~~~~~~~~~~~l~s~-----------------s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 510 SEGGEGH-RDWVSCVRFSPNTLQPTIVSA-----------------SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp CSSTTSC-SSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred ccCCCCC-CCcEEEEEEeCCCCcceEEEE-----------------eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 2211111 1346778999987 344442 2347888899887765544443 45567899999
Q ss_pred CCCEEEEEe
Q 030700 162 DERFLVVCE 170 (173)
Q Consensus 162 dg~~lyv~~ 170 (173)
+++.|..+.
T Consensus 572 dg~~l~sg~ 580 (694)
T 3dm0_A 572 DGSLCASGG 580 (694)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 999776653
No 213
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.35 E-value=4e-05 Score=58.03 Aligned_cols=142 Identities=14% Similarity=0.064 Sum_probs=88.8
Q ss_pred CCcceEEEcCC----C---CEEEE-cCCCeEEEEcC-CCc------EEEeccc-----cCccccceEEc----cCCcE-E
Q 030700 10 NHPEDVSVDGN----G---VLYTA-TGDGWIKRMHP-NGT------WEDWHQV-----GSQSLLGLTTT----KENNV-I 64 (173)
Q Consensus 10 ~~p~~l~~~~~----g---~l~~~-~~~~~i~~~~~-~g~------~~~~~~~-----~~~p~~gl~~~----~~g~l-~ 64 (173)
....++++.++ | .++++ ..++.|..|+. +++ +..+... ..... .++++ +++++ +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 34578899988 8 66654 47888888874 333 4444333 25567 99999 99987 6
Q ss_pred EEEeCCCeEEEEc-cC------C--cE-----EEEec--cCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeeccc
Q 030700 65 IVCDSQQGLLKVS-EE------G--VT-----VLVSQ--FNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSG 128 (173)
Q Consensus 65 ~v~~~~~~i~~~~-~~------g--~~-----~~~~~--~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~ 128 (173)
+++.....+..++ .. + .. .+... ........+..++++|+| ++++..
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~---------------- 204 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF---------------- 204 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC----------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe----------------
Confidence 7776555555555 24 3 33 33210 001112457889999999 666532
Q ss_pred CCCceEEEEcCCCCeeEEeecc-------ccCcceEEEccCCCEEEEEe
Q 030700 129 EPHGVLLKYDPSTNQTSLVLDG-------LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 129 ~~~~~v~~~d~~~~~~~~~~~~-------~~~p~gi~~~~dg~~lyv~~ 170 (173)
.++.|..+|..+++....... ......++|+|++++|+++.
T Consensus 205 -~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 205 -NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred -CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 347899999887765544443 45567899999999887754
No 214
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.34 E-value=1.5e-05 Score=65.51 Aligned_cols=156 Identities=9% Similarity=-0.011 Sum_probs=85.4
Q ss_pred CcceEEEcCCCC-EEEEcC---------CCeEEEEcCC-CcEEEeccccC---ccccceEEccCCcEEEEEeCCCeEEEE
Q 030700 11 HPEDVSVDGNGV-LYTATG---------DGWIKRMHPN-GTWEDWHQVGS---QSLLGLTTTKENNVIIVCDSQQGLLKV 76 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~~---------~~~i~~~~~~-g~~~~~~~~~~---~p~~gl~~~~~g~l~~v~~~~~~i~~~ 76 (173)
...+++++|+|+ |.++.. .+.|+.++.+ |+...+..... ... .++|+|||+.++++.. ..++.+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~-~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFE-NNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEET-TEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEEC-CeEEEE
Confidence 378899999997 444432 2678888864 44433332222 256 7899999976454443 568888
Q ss_pred cc-CC-cEEEEeccCCcc--------------ccCCccEEEcCCCc-EEEEeCcCCcCcccc------------eee-ec
Q 030700 77 SE-EG-VTVLVSQFNGSQ--------------LRFANDVIEASDGS-LYFTVSSTKFTPAEY------------YLD-LV 126 (173)
Q Consensus 77 ~~-~g-~~~~~~~~~~~~--------------~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~------------~~~-~~ 126 (173)
+. .| ...+........ +.....++++|||+ |+++.... .....+ ... ..
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEEC
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccC
Confidence 85 44 444432211100 12346799999997 44432110 000000 000 00
Q ss_pred c----cCCCceEEEEcCCCCee-EEeecc------ccCcceEEEccCCCEEEEE
Q 030700 127 S----GEPHGVLLKYDPSTNQT-SLVLDG------LYFANGVALSEDERFLVVC 169 (173)
Q Consensus 127 ~----~~~~~~v~~~d~~~~~~-~~~~~~------~~~p~gi~~~~dg~~lyv~ 169 (173)
. ......|+.+|..+++. ..+... ......++|||||+.|++.
T Consensus 219 ~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp CBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 0 01234899999987764 333321 1233569999999877543
No 215
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.34 E-value=6.1e-05 Score=60.19 Aligned_cols=136 Identities=13% Similarity=0.099 Sum_probs=88.8
Q ss_pred cceEEEcC--CCCEEEE-cCCCeEEEEcC-CC--------cEE-EeccccCccccceEEccCCcEEEEEeCCC---eEEE
Q 030700 12 PEDVSVDG--NGVLYTA-TGDGWIKRMHP-NG--------TWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQ---GLLK 75 (173)
Q Consensus 12 p~~l~~~~--~g~l~~~-~~~~~i~~~~~-~g--------~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~---~i~~ 75 (173)
..+++++| +|.++++ ..++.|..|+. ++ ... .+........ .+++++++++++++.... +.++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 68899999 9976654 47888988885 33 222 2223344567 999999999856655432 4444
Q ss_pred EccCC--cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-c
Q 030700 76 VSEEG--VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-L 151 (173)
Q Consensus 76 ~~~~g--~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~ 151 (173)
+...+ ...+. .. ......++++|+|. ++++. ..++.|..+|..+++....... .
T Consensus 146 ~~d~~~~~~~~~-~~----~~~v~~~~~~~~~~~~l~~~-----------------~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 146 SWDSGNSLGEVS-GH----SQRINACHLKQSRPMRSMTV-----------------GDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp ETTTCCEEEECC-SC----SSCEEEEEECSSSSCEEEEE-----------------ETTTEEEEEETTTBEEEEEECSSS
T ss_pred EEECCCcceeee-cC----CccEEEEEECCCCCcEEEEE-----------------eCCCcEEEEeCCCcceeeeecccC
Confidence 44444 22221 11 13567899999996 55552 1347899999887765554443 3
Q ss_pred c---CcceEEEccC-CCEEEEEe
Q 030700 152 Y---FANGVALSED-ERFLVVCE 170 (173)
Q Consensus 152 ~---~p~gi~~~~d-g~~lyv~~ 170 (173)
. ....++|+|+ +++|+++.
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEE
T ss_pred CCCceEEEEEECCCCCCEEEEEe
Confidence 3 4678999999 99887754
No 216
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.33 E-value=3.6e-05 Score=57.66 Aligned_cols=101 Identities=14% Similarity=0.063 Sum_probs=64.0
Q ss_pred CccccceEEcc--CCcEEEEEeCCCeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceee
Q 030700 49 SQSLLGLTTTK--ENNVIIVCDSQQGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLD 124 (173)
Q Consensus 49 ~~p~~gl~~~~--~g~l~~v~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~ 124 (173)
.... .+++++ ++++++.+.....+..++. .+ ........ .......++++|+|.++++-
T Consensus 126 ~~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~---~~~~i~~~~~~pdg~~lasg------------- 188 (343)
T 3lrv_A 126 NEII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK---SDVEYSSGVLHKDSLLLALY------------- 188 (343)
T ss_dssp SCEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC---SSCCCCEEEECTTSCEEEEE-------------
T ss_pred CCEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC---CCCceEEEEECCCCCEEEEE-------------
Confidence 3456 899999 9998444444444555553 44 32222111 11347889999999887762
Q ss_pred ecccCCCceEEEEcCCCCeeE--Eeec-cccCcceEEEccCCCEEEEEe
Q 030700 125 LVSGEPHGVLLKYDPSTNQTS--LVLD-GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 125 ~~~~~~~~~v~~~d~~~~~~~--~~~~-~~~~p~gi~~~~dg~~lyv~~ 170 (173)
..++.|..+|..+++.. .+.. .....+.++|+|++++|+.+.
T Consensus 189 ----~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 189 ----SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp ----CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred ----cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 23478999998877643 3332 245668899999999887654
No 217
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.33 E-value=8e-06 Score=61.02 Aligned_cols=79 Identities=15% Similarity=0.327 Sum_probs=48.1
Q ss_pred CCCCEEEEc--CCCeEEEEcCCCc-EEEeccccCccccceEEccCCcEEEEEeCC--------------CeEEEEccCC-
Q 030700 19 GNGVLYTAT--GDGWIKRMHPNGT-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQ--------------QGLLKVSEEG- 80 (173)
Q Consensus 19 ~~g~l~~~~--~~~~i~~~~~~g~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~--------------~~i~~~~~~g- 80 (173)
.++.||++. .+++|++++.+|. ..++.+. .+. -| +++|+.+|.+... ..|++++.+|
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i--~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YI--NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EE--EECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eE--EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 477899987 4678999998885 3333222 234 44 4566666777542 3588888877
Q ss_pred -cEEEEeccCCccccCCccEEEcCCC-cEEEEe
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDG-SLYFTV 111 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~ 111 (173)
.+.+... .+..++++| .||+++
T Consensus 99 ~~~~l~~~---------~~~~~s~~g~~Iy~~~ 122 (302)
T 3s25_A 99 GSTVLDPD---------PCIYASLIGNYIYYLH 122 (302)
T ss_dssp CCEEEECS---------CEEEEEEETTEEEEEE
T ss_pred cceEeecC---------CccEEEEeCCEEEEEe
Confidence 4444321 122455554 588876
No 218
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.32 E-value=9.2e-05 Score=64.43 Aligned_cols=138 Identities=14% Similarity=0.148 Sum_probs=90.7
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcE-EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTW-EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~-~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
....+++++|+|.++++. .++.|..|+. +++. ..+........ +++|+++|++++.+.....+..++. ++ ...
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 456689999999766554 8889999985 4543 33444455667 9999999998555544444555553 55 333
Q ss_pred EEeccCCccccCCccEEEcCCC--cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEc
Q 030700 84 LVSQFNGSQLRFANDVIEASDG--SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALS 160 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG--~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~ 160 (173)
+.. .. .....+++.+++ .++++. ..++.|..+|..+++......+ ....+.++|+
T Consensus 695 ~~~-~~----~~v~~~~~~~~~~~~~l~sg-----------------~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 695 YDE-HS----EQVNCCHFTNKSNHLLLATG-----------------SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp EEC-CS----SCEEEEEECSSSSCCEEEEE-----------------ETTSCEEEEETTSSSEEEEECCCSSCEEEEEEC
T ss_pred EcC-CC----CcEEEEEEecCCCceEEEEE-----------------eCCCeEEEEECCCcchhheecCCCCCEEEEEEe
Confidence 321 11 356778898854 344442 2347889999887765444433 4556789999
Q ss_pred cCCCEEEEEe
Q 030700 161 EDERFLVVCE 170 (173)
Q Consensus 161 ~dg~~lyv~~ 170 (173)
|+++.++.+.
T Consensus 753 p~~~~l~s~s 762 (1249)
T 3sfz_A 753 PDDELLASCS 762 (1249)
T ss_dssp SSTTEEEEEE
T ss_pred cCCCEEEEEE
Confidence 9999877654
No 219
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.32 E-value=6.7e-06 Score=62.37 Aligned_cols=137 Identities=9% Similarity=0.033 Sum_probs=81.9
Q ss_pred CcceEEEcCCCCEEEEc-CCCeEEEEcCC-CcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEE-cc-CC-cEEE
Q 030700 11 HPEDVSVDGNGVLYTAT-GDGWIKRMHPN-GTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKV-SE-EG-VTVL 84 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~-~~-~g-~~~~ 84 (173)
...++++.|+|..+++. .++.|..||.. ++.. .+........ .++++++++.++++...++.+++ +. .+ ....
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~-~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~ 219 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVN-CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR 219 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE-EEEEccCCCceeeeeccCCceEEEECCCCceeee
Confidence 35789999999766544 88899999854 4433 3333345567 89999887532444444444444 43 34 1111
Q ss_pred EeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccC
Q 030700 85 VSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSED 162 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~d 162 (173)
.... .....+..++++|++ .++++- ..++.|..+|..+++......+ ....+.|+|+|+
T Consensus 220 ~~~~--~~~~~v~~v~~sp~~~~~la~g-----------------~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 220 IDFC--ASDTIPTSVTWHPEKDDTFACG-----------------DETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp CCCT--TCCSCEEEEEECTTSTTEEEEE-----------------ESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSS
T ss_pred eeec--cccccccchhhhhcccceEEEe-----------------ecccceeEEECCCCcEeEEEeccceeEEEEEEcCC
Confidence 1111 111346789999975 555542 1346888889877654443333 344578999998
Q ss_pred CCEEE
Q 030700 163 ERFLV 167 (173)
Q Consensus 163 g~~ly 167 (173)
++.+.
T Consensus 281 ~~~~l 285 (357)
T 4g56_B 281 SSPFL 285 (357)
T ss_dssp SSCCE
T ss_pred CCCEE
Confidence 75433
No 220
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.30 E-value=0.00013 Score=55.81 Aligned_cols=139 Identities=10% Similarity=-0.008 Sum_probs=89.3
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC--Cc-EEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEE
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN--GT-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~--g~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~ 83 (173)
....++++++ ..++.+..++.|..|+.. +. ...+........ ++++++++++++++.....+..++. .+ ...
T Consensus 177 ~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 177 ARVGCLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp SCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CceEEEEECC-CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 3455677742 244455588889999854 33 333334455677 9999999998555554444555554 44 222
Q ss_pred EEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccC
Q 030700 84 LVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSED 162 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~d 162 (173)
+. .. ......++++|+| .++++... ..++.|..+|..+++.............++|+|+
T Consensus 255 ~~-~~----~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~ 314 (401)
T 4aez_A 255 KT-NH----NAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPH 314 (401)
T ss_dssp EC-CC----SSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSS
T ss_pred ec-CC----cceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCC
Confidence 21 11 1357889999987 46665321 1347899999887776555555566789999999
Q ss_pred CCEEEEEe
Q 030700 163 ERFLVVCE 170 (173)
Q Consensus 163 g~~lyv~~ 170 (173)
++.++++.
T Consensus 315 ~~~l~~~~ 322 (401)
T 4aez_A 315 SKEIMSTH 322 (401)
T ss_dssp SSEEEEEE
T ss_pred CCeEEEEe
Confidence 99888753
No 221
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.29 E-value=6.3e-05 Score=57.85 Aligned_cols=138 Identities=11% Similarity=0.100 Sum_probs=89.0
Q ss_pred CcceEEEc---C-----CCCEEEEc-CCCeEEEEcC-CCcEEEec-----cc--------------cCccccceEEccC-
Q 030700 11 HPEDVSVD---G-----NGVLYTAT-GDGWIKRMHP-NGTWEDWH-----QV--------------GSQSLLGLTTTKE- 60 (173)
Q Consensus 11 ~p~~l~~~---~-----~g~l~~~~-~~~~i~~~~~-~g~~~~~~-----~~--------------~~~p~~gl~~~~~- 60 (173)
....+++| + ++.+|++| ....|..+|. +|+.-++. .. ..... ||+++++
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~-gIaLsp~~ 231 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIF-GITLGDRD 231 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEE-EEEECCCC
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCce-EEEecCCc
Confidence 45678888 2 45799999 6678888884 44322221 11 12456 9999987
Q ss_pred ---CcEEEEEeCCC-eEEEEc----cCC-----cEEEEeccCCccccCCccEEEc-CCCcEEEEeCcCCcCcccceeeec
Q 030700 61 ---NNVIIVCDSQQ-GLLKVS----EEG-----VTVLVSQFNGSQLRFANDVIEA-SDGSLYFTVSSTKFTPAEYYLDLV 126 (173)
Q Consensus 61 ---g~l~~v~~~~~-~i~~~~----~~g-----~~~~~~~~~~~~~~~~~~l~~~-~dG~~~v~~~~~~~~~~~~~~~~~ 126 (173)
++.||++...+ .++++. .+. ++.+.... +....-++++| .+|.+|+++..
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg---~~s~~~~~~~D~~~G~ly~~~~~------------- 295 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRG---KYNDAIALAYDPKTKVIFFAEAN------------- 295 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECC---TTCCEEEEEECTTTCEEEEEESS-------------
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecC---CCCCcceEEEeCCCCeEEEEecc-------------
Confidence 78889987654 688875 122 33333221 11122356786 78999999743
Q ss_pred ccCCCceEEEEcCCC-----CeeEEeec--cccCcceEEEccCCCEEEEEe
Q 030700 127 SGEPHGVLLKYDPST-----NQTSLVLD--GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 127 ~~~~~~~v~~~d~~~-----~~~~~~~~--~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.+.|.++++++ .....+.. .+.+|.+|.++++|. ||+..
T Consensus 296 ----~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~-Lwv~s 341 (381)
T 3q6k_A 296 ----TKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG-LWFMS 341 (381)
T ss_dssp ----SSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC-EEEEE
T ss_pred ----CCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe-EEEEE
Confidence 36899999985 23344443 478999999998885 88754
No 222
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.28 E-value=8e-05 Score=61.19 Aligned_cols=139 Identities=14% Similarity=0.140 Sum_probs=87.3
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcCCCcEE-Eecc----ccCccccceEEccCC--cEEEEEeCCCeEEEEcc-CC
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHPNGTWE-DWHQ----VGSQSLLGLTTTKEN--NVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~g~~~-~~~~----~~~~p~~gl~~~~~g--~l~~v~~~~~~i~~~~~-~g 80 (173)
....+++++|++..+ .+..++.|..|+..+... .+.. ...... ++++++++ .+++.+.....|...+. ++
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~ 551 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS-CVRFSPNTLQPTIVSASWDKTVKVWNLSNC 551 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE-EEEECSCSSSCEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE-EEEEeCCCCcceEEEEeCCCeEEEEECCCC
Confidence 446789999988644 455889999998765432 2211 223356 88999876 45344443444444453 34
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVAL 159 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~ 159 (173)
......... .....++++|+|+++++.. .++.|..+|..+++...........+.++|
T Consensus 552 ~~~~~~~~h~----~~v~~v~~spdg~~l~sg~-----------------~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 552 KLRSTLAGHT----GYVSTVAVSPDGSLCASGG-----------------KDGVVLLWDLAEGKKLYSLEANSVIHALCF 610 (694)
T ss_dssp CEEEEECCCS----SCEEEEEECTTSSEEEEEE-----------------TTSBCEEEETTTTEEEECCBCSSCEEEEEE
T ss_pred cEEEEEcCCC----CCEEEEEEeCCCCEEEEEe-----------------CCCeEEEEECCCCceEEEecCCCcEEEEEE
Confidence 222222111 3567899999999877632 347888899887765444444455678999
Q ss_pred ccCCCEEEEEe
Q 030700 160 SEDERFLVVCE 170 (173)
Q Consensus 160 ~~dg~~lyv~~ 170 (173)
+|++..|..+.
T Consensus 611 sp~~~~l~~~~ 621 (694)
T 3dm0_A 611 SPNRYWLCAAT 621 (694)
T ss_dssp CSSSSEEEEEE
T ss_pred cCCCcEEEEEc
Confidence 99998776543
No 223
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.28 E-value=0.00013 Score=54.47 Aligned_cols=142 Identities=15% Similarity=0.114 Sum_probs=85.8
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcCCC---cEE-EeccccCccccceEEccC--CcEEEEEeCCCeEEEEcc-CC
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNG---TWE-DWHQVGSQSLLGLTTTKE--NNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g---~~~-~~~~~~~~p~~gl~~~~~--g~l~~v~~~~~~i~~~~~-~g 80 (173)
-....+++++|+|.++++. .++.|..|+.++ +.. .+........ .++++++ +++|+.+.....+..++. .+
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 3557789999998766554 788898888542 222 2223344566 8999866 888565554444555553 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCC--CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe---eEEeeccccCc
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASD--GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ---TSLVLDGLYFA 154 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~d--G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~~p 154 (173)
........ +. ......++++|+ |.++++-. .++.|..+|..++. ...+.......
T Consensus 90 ~~~~~~~~~-~~-~~~v~~~~~~~~~~~~~l~~~~-----------------~d~~i~v~d~~~~~~~~~~~~~~~~~~v 150 (379)
T 3jrp_A 90 RWSQIAVHA-VH-SASVNSVQWAPHEYGPLLLVAS-----------------SDGKVSVVEFKENGTTSPIIIDAHAIGV 150 (379)
T ss_dssp EEEEEEEEC-CC-SSCEEEEEECCGGGCSEEEEEE-----------------TTSEEEEEECCTTSCCCEEEEECCTTCE
T ss_pred ceeEeeeec-CC-CcceEEEEeCCCCCCCEEEEec-----------------CCCcEEEEecCCCCceeeEEecCCCCce
Confidence 22222211 11 135688999998 87666521 34688888877552 22222334456
Q ss_pred ceEEEcc-------------CCCEEEEEe
Q 030700 155 NGVALSE-------------DERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~-------------dg~~lyv~~ 170 (173)
..++|+| +++.++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 179 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGG 179 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEE
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEe
Confidence 7899998 677776653
No 224
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.28 E-value=8.2e-05 Score=55.25 Aligned_cols=142 Identities=8% Similarity=-0.055 Sum_probs=85.2
Q ss_pred CCcceEEEcCC---CC-EEEEcCCCeEEEEcCC-Cc--EEEeccccCccccce------EEccCCcEEEEEeCCCeEEEE
Q 030700 10 NHPEDVSVDGN---GV-LYTATGDGWIKRMHPN-GT--WEDWHQVGSQSLLGL------TTTKENNVIIVCDSQQGLLKV 76 (173)
Q Consensus 10 ~~p~~l~~~~~---g~-l~~~~~~~~i~~~~~~-g~--~~~~~~~~~~p~~gl------~~~~~g~l~~v~~~~~~i~~~ 76 (173)
....++++.|+ |. |+++..++.|..|+.. ++ ...+........ .+ ++++++++++.+.....+..+
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vw 144 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVW 144 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEE
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEE
Confidence 34578899987 55 5555688999999853 33 333333333444 55 457888885555544445555
Q ss_pred cc-CC---cEEEEeccCCccccCCccEE----EcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 77 SE-EG---VTVLVSQFNGSQLRFANDVI----EASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 77 ~~-~g---~~~~~~~~~~~~~~~~~~l~----~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
+. .+ ...+ ....+........++ +++++.++++.. .++.|..+|..+++.....
T Consensus 145 d~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 145 DPRQKDDPVANM-EPVQGENKRDCWTVAFGNAYNQEERVVCAGY-----------------DNGDIKLFDLRNMALRWET 206 (357)
T ss_dssp CTTSCSSCSEEE-CCCTTSCCCCEEEEEEECCCC-CCCEEEEEE-----------------TTSEEEEEETTTTEEEEEE
T ss_pred eCCCCCCcceec-cccCCCCCCceEEEEEEeccCCCCCEEEEEc-----------------cCCeEEEEECccCceeeec
Confidence 53 33 2332 222221112345555 668888666521 3478999999888765554
Q ss_pred ccccCcceEEEcc---CCCEEEEEe
Q 030700 149 DGLYFANGVALSE---DERFLVVCE 170 (173)
Q Consensus 149 ~~~~~p~gi~~~~---dg~~lyv~~ 170 (173)
........++|+| +++.++++.
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEEC
Confidence 4456678899999 888887764
No 225
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.28 E-value=3e-05 Score=57.90 Aligned_cols=124 Identities=9% Similarity=0.108 Sum_probs=79.1
Q ss_pred EEcC-CCCEEEEc-CCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCC--CeEEEEccCC--cEEEEeccC
Q 030700 16 SVDG-NGVLYTAT-GDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ--QGLLKVSEEG--VTVLVSQFN 89 (173)
Q Consensus 16 ~~~~-~g~l~~~~-~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~--~~i~~~~~~g--~~~~~~~~~ 89 (173)
++++ ++.||+++ ....|++.+.+|.-.+.... .+. ...++|+++.+|+++.. ..|.+++.+| .+.+...
T Consensus 151 ~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~-- 225 (302)
T 3s25_A 151 TCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA-- 225 (302)
T ss_dssp CSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS--
T ss_pred EeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC--
Confidence 3455 45899888 46789999988764332222 233 34466777777988765 3699999888 4444321
Q ss_pred CccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEE
Q 030700 90 GSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVV 168 (173)
Q Consensus 90 ~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv 168 (173)
. . ..++|+| .||+++.. ....|++++.++...+.+..+ +...+++.+++||+
T Consensus 226 --~--~---~~~~~~g~~Iy~~~~~----------------~~~~i~~~~~DG~~r~~l~~~----~~~~i~i~~d~Iy~ 278 (302)
T 3s25_A 226 --N--I---EHYNVYGSLIFYQRGG----------------DNPALCVVKNDGTGFKELAKG----EFCNINVTSQYVYF 278 (302)
T ss_dssp --C--E---EEEEEETTEEEEEECS----------------SSCEEEEEETTSCCCEEEEES----CEEEEEECSSEEEE
T ss_pred --C--c---ceEEECCCEEEEEECC----------------CCcEEEEEECCCCccEEeeCC----ccceEEEeCCEEEE
Confidence 1 1 3377776 58887432 125899999996655555543 23356667889999
Q ss_pred Eec
Q 030700 169 CES 171 (173)
Q Consensus 169 ~~~ 171 (173)
++.
T Consensus 279 td~ 281 (302)
T 3s25_A 279 TDF 281 (302)
T ss_dssp EET
T ss_pred EEC
Confidence 983
No 226
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.27 E-value=1.8e-05 Score=59.38 Aligned_cols=136 Identities=9% Similarity=-0.012 Sum_probs=82.8
Q ss_pred CcceEEEcC--CCCEEEEc-CCCeEEEEcC-CCcEEEec-cc-cCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--c
Q 030700 11 HPEDVSVDG--NGVLYTAT-GDGWIKRMHP-NGTWEDWH-QV-GSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--V 81 (173)
Q Consensus 11 ~p~~l~~~~--~g~l~~~~-~~~~i~~~~~-~g~~~~~~-~~-~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~ 81 (173)
...+++++| ++.++++. .++.|..||. +++..... .. ..... .++++++|+++..+.....|..++. ++ .
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~-~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYS-SGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCC-EEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceE-EEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 467899999 88877644 8899999985 45543322 22 23466 9999999999444443344555553 44 2
Q ss_pred -EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc---cCc---
Q 030700 82 -TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL---YFA--- 154 (173)
Q Consensus 82 -~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~p--- 154 (173)
..+.... ......++++|+|.++++.. ++.|..+|..+++.......+ ..+
T Consensus 206 ~~~~~~~h----~~~v~~l~fs~~g~~l~s~~------------------~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 206 SSRFPVDE----EAKIKEVKFADNGYWMVVEC------------------DQTVVCFDLRKDVGTLAYPTYTIPEFKTGT 263 (343)
T ss_dssp CEECCCCT----TSCEEEEEECTTSSEEEEEE------------------SSBEEEEETTSSTTCBSSCCCBC-----CC
T ss_pred ccEEeccC----CCCEEEEEEeCCCCEEEEEe------------------CCeEEEEEcCCCCcceeecccccccccccc
Confidence 2332101 13578899999998766632 247888888765432111110 112
Q ss_pred ceEEEccCCCEEEEE
Q 030700 155 NGVALSEDERFLVVC 169 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~ 169 (173)
..++|+|++++|.++
T Consensus 264 ~~~~~~~~g~~l~~~ 278 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAY 278 (343)
T ss_dssp EEEEECTTSSEEEEE
T ss_pred eEEEECCCCCEEEEe
Confidence 249999999988874
No 227
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.27 E-value=0.00022 Score=52.32 Aligned_cols=106 Identities=17% Similarity=0.121 Sum_probs=61.0
Q ss_pred ceecCCccCCcceEEEcCCCCEEEE-cCCCeEEEEcCCCc-----EE-EeccccCccccceEEcc--CCcEEEEEeCCCe
Q 030700 2 IKLGEGIVNHPEDVSVDGNGVLYTA-TGDGWIKRMHPNGT-----WE-DWHQVGSQSLLGLTTTK--ENNVIIVCDSQQG 72 (173)
Q Consensus 2 ~~~~~~~~~~p~~l~~~~~g~l~~~-~~~~~i~~~~~~g~-----~~-~~~~~~~~p~~gl~~~~--~g~l~~v~~~~~~ 72 (173)
.++..+--....+++++|+|.++++ ..++.|..|+.+.. .. .+........ .++|++ ++++|+.+.....
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSC
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCe
Confidence 3445555567889999999876554 47888888885321 22 2223344566 999998 5888455544444
Q ss_pred EEEEcc-CC-c-------EEEEeccCCccccCCccEEEcCC--CcEEEE
Q 030700 73 LLKVSE-EG-V-------TVLVSQFNGSQLRFANDVIEASD--GSLYFT 110 (173)
Q Consensus 73 i~~~~~-~g-~-------~~~~~~~~~~~~~~~~~l~~~~d--G~~~v~ 110 (173)
+..++. .+ . ..+.. ..+. ......++++|+ |.++++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~~~l~~ 129 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCT-LNDS-KGSLYSVKFAPAHLGLKLAC 129 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEE-ECCC-SSCEEEEEECCGGGCSEEEE
T ss_pred EEEEecCCCcccccccCcceeee-eccc-CCceeEEEEcCCCCCcEEEE
Confidence 444442 22 1 22222 1111 134567888887 765544
No 228
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.26 E-value=2e-05 Score=65.35 Aligned_cols=132 Identities=7% Similarity=-0.073 Sum_probs=80.0
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEeccccC------ccccceEEccCCcEEEEEeCC---------CeEEE
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQVGS------QSLLGLTTTKENNVIIVCDSQ---------QGLLK 75 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~------~p~~gl~~~~~g~l~~v~~~~---------~~i~~ 75 (173)
-.+++|.|+|.+++++ ++.|+.++. +|+...+..... ... .++++|||+.++++... ..++.
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSIN-DYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCC-EEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhccccc-ceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4578999999777666 789999995 455444322111 123 47889999875554321 12445
Q ss_pred Ecc-CC-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc-
Q 030700 76 VSE-EG-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL- 151 (173)
Q Consensus 76 ~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~- 151 (173)
++. .| ...+.. .. ......+++|||+ |.++. ++.|+.++..+++...+....
T Consensus 97 ~d~~~~~~~~l~~-~~----~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~~~~~~lt~~g~ 152 (740)
T 4a5s_A 97 YDLNKRQLITEER-IP----NNTQWVTWSPVGHKLAYVW-------------------NNDIYVKIEPNLPSYRITWTGK 152 (740)
T ss_dssp EETTTTEECCSSC-CC----TTEEEEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCSCCB
T ss_pred EECCCCcEEEccc-CC----CcceeeEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEcCCCC
Confidence 554 34 322211 11 2356789999996 54442 147888888777665543211
Q ss_pred ------------------cCcceEEEccCCCEEEEE
Q 030700 152 ------------------YFANGVALSEDERFLVVC 169 (173)
Q Consensus 152 ------------------~~p~gi~~~~dg~~lyv~ 169 (173)
....+++|||||+.|..+
T Consensus 153 ~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 153 EDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred ccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 222458999999987765
No 229
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.26 E-value=0.00014 Score=58.12 Aligned_cols=138 Identities=11% Similarity=0.062 Sum_probs=85.3
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC-CCeEEEEccCC-cEEEEec
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS-QQGLLKVSEEG-VTVLVSQ 87 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~-~~~i~~~~~~g-~~~~~~~ 87 (173)
.|..+++.|+|.+.+....+.+..++. +++..........+. .++++ +++++++.. ...+..++... .... ..
T Consensus 408 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~l~~~~~~d~~i~~~~~~~~~~~~-~~ 483 (615)
T 1pgu_A 408 QPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS-AVSLS--QNYVAVGLEEGNTIQVFKLSDLEVSF-DL 483 (615)
T ss_dssp CEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE-EEEEC--SSEEEEEETTTSCEEEEETTEEEEEE-EC
T ss_pred CceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCce-EEEEc--CCEEEEeecCCCeEEEEECCCccccc-cc
Confidence 456666666666555545556666653 455443334455677 88888 667466655 44455555433 2111 22
Q ss_pred cCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec--cccCcceEEEcc----
Q 030700 88 FNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD--GLYFANGVALSE---- 161 (173)
Q Consensus 88 ~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~--~~~~p~gi~~~~---- 161 (173)
..+ ....+..++++|+|+++++-. .++.|..+|..+++...... .....+.++|+|
T Consensus 484 ~~~-~~~~v~~~~~s~~g~~l~~~~-----------------~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 484 KTP-LRAKPSYISISPSETYIAAGD-----------------VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKG 545 (615)
T ss_dssp SSC-CSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC--
T ss_pred cCC-ccCceEEEEECCCCCEEEEcC-----------------CCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCcccc
Confidence 221 124578899999998776632 34789999998777654443 345568899999
Q ss_pred ------CCCEEEEEe
Q 030700 162 ------DERFLVVCE 170 (173)
Q Consensus 162 ------dg~~lyv~~ 170 (173)
++++|+++.
T Consensus 546 ~~~~~~~~~~l~~~~ 560 (615)
T 1pgu_A 546 ANEEEIEEDLVATGS 560 (615)
T ss_dssp ----CCSCCEEEEEE
T ss_pred ccccccCCCEEEEEc
Confidence 999887764
No 230
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.25 E-value=4.9e-05 Score=57.85 Aligned_cols=140 Identities=8% Similarity=0.057 Sum_probs=86.0
Q ss_pred CCcceEEEcCC-CCEEEE-cCCCeEEEEcCC-CcEEE-eccc------cCccccceEEccCC-cEEEEEeCCC---eEEE
Q 030700 10 NHPEDVSVDGN-GVLYTA-TGDGWIKRMHPN-GTWED-WHQV------GSQSLLGLTTTKEN-NVIIVCDSQQ---GLLK 75 (173)
Q Consensus 10 ~~p~~l~~~~~-g~l~~~-~~~~~i~~~~~~-g~~~~-~~~~------~~~p~~gl~~~~~g-~l~~v~~~~~---~i~~ 75 (173)
....++++.|+ +.++++ ..++.|..|+.. ++... +... ..... .+++++++ ++++.+.... .+..
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS-VVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE-EEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE-EEEECCCCCCEEEEEECCCCCceEEE
Confidence 45678999997 666655 478889999964 44332 2222 34466 99999997 5634444333 4555
Q ss_pred Ecc-CCcEEEEeccC-CccccCCccEEEcC-CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cc
Q 030700 76 VSE-EGVTVLVSQFN-GSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GL 151 (173)
Q Consensus 76 ~~~-~g~~~~~~~~~-~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~ 151 (173)
++. .+...+. ... +. ...+..++++| +|.++++.. .++.|..+|..+++...... ..
T Consensus 245 ~d~~~~~~~~~-~~~~~~-~~~v~~~~~s~~~~~~l~s~~-----------------~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 245 WDLRNANTPLQ-TLNQGH-QKGILSLDWCHQDEHLLLSSG-----------------RDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp EETTSTTSCSB-CCCSCC-SSCEEEEEECSSCSSCEEEEE-----------------SSSEEEEECSSSCCEEEEEECSS
T ss_pred EeCCCCCCCcE-EeecCc-cCceeEEEeCCCCCCeEEEEe-----------------CCCCEEEeeCCCCccceeecCCC
Confidence 553 3211111 111 11 13567899999 887666532 34789999988776544333 34
Q ss_pred cCcceEEEccCC-CEEEEE
Q 030700 152 YFANGVALSEDE-RFLVVC 169 (173)
Q Consensus 152 ~~p~gi~~~~dg-~~lyv~ 169 (173)
.....++|+|++ +.|+.+
T Consensus 306 ~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 306 NWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp SCCCCEEECTTCTTEEEEC
T ss_pred CceEEEEECCCCCCEEEEE
Confidence 556789999998 555543
No 231
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.23 E-value=0.00017 Score=53.87 Aligned_cols=139 Identities=11% Similarity=0.032 Sum_probs=78.5
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCCC--------cEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPNG--------TWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g--------~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~- 78 (173)
....+++|.|++.++++. .++.|..|+... +.. .+........ .++|+++|++|+.+.....+...+.
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEecc
Confidence 346789999999766555 788888887532 111 2223344566 9999999998454444444444443
Q ss_pred C-C--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe--eEEeec-ccc
Q 030700 79 E-G--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ--TSLVLD-GLY 152 (173)
Q Consensus 79 ~-g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~-~~~ 152 (173)
. + .+.+. .+.+. ......++++|+|.++++.. .++.|..+|..++. ...... ...
T Consensus 138 ~~~~~~~~~~-~~~~h-~~~v~~v~~~p~~~~l~s~s-----------------~D~~i~iW~~~~~~~~~~~~~~~h~~ 198 (330)
T 2hes_X 138 ESGEEYECIS-VLQEH-SQDVKHVIWHPSEALLASSS-----------------YDDTVRIWKDYDDDWECVAVLNGHEG 198 (330)
T ss_dssp TTCCCCEEEE-EECCC-SSCEEEEEECSSSSEEEEEE-----------------TTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred CCCCCeEEEE-EeccC-CCceEEEEECCCCCEEEEEc-----------------CCCeEEEEECCCCCeeEEEEccCCCC
Confidence 2 2 22221 12211 13567899999998777632 23566666654442 222222 234
Q ss_pred CcceEEEccC--CCEEEE
Q 030700 153 FANGVALSED--ERFLVV 168 (173)
Q Consensus 153 ~p~gi~~~~d--g~~lyv 168 (173)
....++|+|+ +..|..
T Consensus 199 ~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CEEEEEECCSSSSCEEEE
T ss_pred cEEEEEecCCCCeeEEEE
Confidence 4567888887 444443
No 232
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.23 E-value=1.7e-05 Score=62.73 Aligned_cols=59 Identities=19% Similarity=0.220 Sum_probs=40.9
Q ss_pred CCcceEEEcCCCCEEEEcC------------------CCeEEEEcCCCc---------------------EEEeccccCc
Q 030700 10 NHPEDVSVDGNGVLYTATG------------------DGWIKRMHPNGT---------------------WEDWHQVGSQ 50 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~------------------~~~i~~~~~~g~---------------------~~~~~~~~~~ 50 (173)
.....|+|+|+|.||++.. .|+|+|++++|. .+.+.-....
T Consensus 139 H~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RN 218 (463)
T 2wg3_C 139 HLGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHD 218 (463)
T ss_dssp SCEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSS
T ss_pred ccCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCC
Confidence 4455699999999998751 367999999883 1233333457
Q ss_pred cccceEEccC-----CcE-EEEEeC
Q 030700 51 SLLGLTTTKE-----NNV-IIVCDS 69 (173)
Q Consensus 51 p~~gl~~~~~-----g~l-~~v~~~ 69 (173)
|. |++|+++ |++ +|.++.
T Consensus 219 p~-gla~dp~tg~~~G~l~~~~~D~ 242 (463)
T 2wg3_C 219 PG-RCAVDRHPTDININLTILCSDS 242 (463)
T ss_dssp CC-BEEEESSCSSTTCSEEEEEECC
T ss_pred cc-eEEECCCCCCcccceEEEeccc
Confidence 99 9999987 543 255663
No 233
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.23 E-value=0.00053 Score=50.49 Aligned_cols=156 Identities=10% Similarity=-0.020 Sum_probs=81.3
Q ss_pred CCcceEEEcCC-CCEEEEc-CCCeEEEEcCCC-c------EEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-
Q 030700 10 NHPEDVSVDGN-GVLYTAT-GDGWIKRMHPNG-T------WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE- 79 (173)
Q Consensus 10 ~~p~~l~~~~~-g~l~~~~-~~~~i~~~~~~g-~------~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~- 79 (173)
....+|+|.|+ +.++++. .++.|..|+... + ...+........ .++|+++|++++.+.....+...+..
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~~~~~ 117 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLWDLTT 117 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEEeecc
Confidence 45678999996 6777655 788888887432 1 112222344566 99999999985555444444444432
Q ss_pred C-cEEEEeccCCccccCCccEEEcC----------CCcEEEEeCcCC-------cCcccc-----------eeeecccCC
Q 030700 80 G-VTVLVSQFNGSQLRFANDVIEAS----------DGSLYFTVSSTK-------FTPAEY-----------YLDLVSGEP 130 (173)
Q Consensus 80 g-~~~~~~~~~~~~~~~~~~l~~~~----------dG~~~v~~~~~~-------~~~~~~-----------~~~~~~~~~ 130 (173)
+ ......... .....+.+.+ ||.+.+-+.... .+.... ...++....
T Consensus 118 ~~~~~~~~~~~----~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 118 GTTTRRFVGHT----KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp TEEEEEEECCS----SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred cceeeeecCCC----CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 2 211111111 1122223333 333322221100 000000 001122334
Q ss_pred CceEEEEcCCCCeeEEeecc-ccCcceEEEccCCCEEEEEe
Q 030700 131 HGVLLKYDPSTNQTSLVLDG-LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 131 ~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~dg~~lyv~~ 170 (173)
++.|..+|..+++......+ ....+.|+|+|++++|+.+.
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 56788888887765554443 34457899999999877653
No 234
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.22 E-value=0.00041 Score=51.09 Aligned_cols=138 Identities=11% Similarity=0.007 Sum_probs=83.3
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCC-C-cEE-EeccccCccccceEEcc-CCcEEEEEeCCCeEEEEcc-CC--c
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPN-G-TWE-DWHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVSE-EG--V 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~-g-~~~-~~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~~-~g--~ 81 (173)
....++++.|++.++++. .++.|..||.. + ... .+........ .++|+| ++++++.+.....+...+. .+ .
T Consensus 98 ~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEE-EEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEE-EEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 446789999988766554 88999999853 3 222 2333344566 899998 5677344443333444443 33 2
Q ss_pred EEEEeccCCccccCCccEEEcC--CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEE
Q 030700 82 TVLVSQFNGSQLRFANDVIEAS--DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVA 158 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~--dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~ 158 (173)
..+..... ...+.+.+.+ ++.++++- ..++.|..+|..+++......+ ......++
T Consensus 177 ~~~~~~~~----~~v~~~~~~~~~~~~~l~s~-----------------s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 177 FTLTTGQE----RGVNYVDYYPLPDKPYMITA-----------------SDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEEECCCT----TCEEEEEECCSTTCCEEEEE-----------------ETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred ceeccCCc----CcEEEEEEEEcCCCCEEEEE-----------------cCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 22221111 2345566665 66666652 2457899999987765444433 45567899
Q ss_pred EccCCCEEEEE
Q 030700 159 LSEDERFLVVC 169 (173)
Q Consensus 159 ~~~dg~~lyv~ 169 (173)
|+|+++.|+.+
T Consensus 236 ~~p~~~~l~s~ 246 (304)
T 2ynn_A 236 FHPTLPIIISG 246 (304)
T ss_dssp ECSSSSEEEEE
T ss_pred ECCCCCEEEEE
Confidence 99999876654
No 235
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.22 E-value=3.5e-05 Score=67.02 Aligned_cols=137 Identities=10% Similarity=0.046 Sum_probs=90.4
Q ss_pred CCcceEEEcCCCCEE-EEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEE
Q 030700 10 NHPEDVSVDGNGVLY-TATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~-~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~ 84 (173)
....+++++|+|..+ .+..++.|..|+. +++............ .+++++++++ +.+.....+..++. ++ ...+
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~l-~~~~~dg~v~vwd~~~~~~~~~~ 1081 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQDSRL-LSWSFDGTVKVWNVITGRIERDF 1081 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEE-EEEECSSSEE-EEEESSSEEEEEETTTTCCCEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEE-EEEEcCCCcE-EEEECCCcEEEEECCCCceeEEE
Confidence 456789999988655 5558889999985 445444444455566 8999998877 66555555666663 55 3443
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEccCC
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSEDE 163 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~dg 163 (173)
.. .. .....++++|+|.++++.. .++.|..+|..+++......+ ....+.++|+||+
T Consensus 1082 ~~-~~----~~v~~~~~s~d~~~l~s~s-----------------~d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg 1139 (1249)
T 3sfz_A 1082 TC-HQ----GTVLSCAISSDATKFSSTS-----------------ADKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDG 1139 (1249)
T ss_dssp EC-CS----SCCCCEEECSSSSSCEEEC-----------------CSSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSS
T ss_pred cc-cC----CcEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCcceeeeeccCCCcEEEEEECCCC
Confidence 22 11 3568899999998666532 346777888776654333332 3445789999999
Q ss_pred CEEEEEe
Q 030700 164 RFLVVCE 170 (173)
Q Consensus 164 ~~lyv~~ 170 (173)
++|+++.
T Consensus 1140 ~~lat~~ 1146 (1249)
T 3sfz_A 1140 ILLATGD 1146 (1249)
T ss_dssp SEEEEEE
T ss_pred CEEEEEe
Confidence 9887764
No 236
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.20 E-value=3.1e-05 Score=57.40 Aligned_cols=136 Identities=13% Similarity=-0.016 Sum_probs=80.5
Q ss_pred CccCCcceEEEcCCCCEE-EEcCCCeEEEEcC-CCc----EEEeccccCccccceEEccCCc-EEEEEeCCCeEEEEcc-
Q 030700 7 GIVNHPEDVSVDGNGVLY-TATGDGWIKRMHP-NGT----WEDWHQVGSQSLLGLTTTKENN-VIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 7 ~~~~~p~~l~~~~~g~l~-~~~~~~~i~~~~~-~g~----~~~~~~~~~~p~~gl~~~~~g~-l~~v~~~~~~i~~~~~- 78 (173)
+--....+++|.|++.++ ++..++.|..|+. .+. ............ .++++++++ +++++.....+..++.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 333567889999988655 5558888888874 333 333334445667 999999999 7566655555666665
Q ss_pred CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC---------CeeEEee
Q 030700 79 EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST---------NQTSLVL 148 (173)
Q Consensus 79 ~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~---------~~~~~~~ 148 (173)
.. ........ ........++++| +.++++.. .++.|..+|..+ ++.....
T Consensus 88 ~~~~~~~~~~~--~~~~~v~~l~~~~-~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 147 (342)
T 1yfq_A 88 GSPSFQALTNN--EANLGICRICKYG-DDKLIAAS-----------------WDGLIEVIDPRNYGDGVIAVKNLNSNNT 147 (342)
T ss_dssp SSSSEEECBSC--CCCSCEEEEEEET-TTEEEEEE-----------------TTSEEEEECHHHHTTBCEEEEESCSSSS
T ss_pred cCCceEecccc--CCCCceEEEEeCC-CCEEEEEc-----------------CCCeEEEEcccccccccccccCCeeeEE
Confidence 54 32221110 0113567899999 77666532 336777777653 2221112
Q ss_pred ccccCcceEEEccCC
Q 030700 149 DGLYFANGVALSEDE 163 (173)
Q Consensus 149 ~~~~~p~gi~~~~dg 163 (173)
.....+..++|+|++
T Consensus 148 ~~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 148 KVKNKIFTMDTNSSR 162 (342)
T ss_dssp SSCCCEEEEEECSSE
T ss_pred eeCCceEEEEecCCc
Confidence 223445678887775
No 237
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.19 E-value=0.00073 Score=49.73 Aligned_cols=139 Identities=10% Similarity=-0.034 Sum_probs=81.3
Q ss_pred CCcceEEEcCCC--CEEEEc-CCCeEEEEcCC-CcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccCCcEEE
Q 030700 10 NHPEDVSVDGNG--VLYTAT-GDGWIKRMHPN-GTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEGVTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g--~l~~~~-~~~~i~~~~~~-g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g~~~~ 84 (173)
.....+++.+++ .++++. .++.|..|+.. ++... +........ .+++++++++++.+.....+...+......+
T Consensus 172 ~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 172 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLN-TVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEE-EEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 344567777643 455444 77888888854 44333 333344566 9999999999555544444444453321111
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec----------cccCc
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD----------GLYFA 154 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~----------~~~~p 154 (173)
...... .....+.+.|++.++.+. .++.|..+|.+++....... .....
T Consensus 251 ~~~~~~---~~v~~~~~~~~~~~~~~~------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 251 YTLDGG---DIINALCFSPNRYWLCAA------------------TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp EEEECS---SCEEEEEECSSSSEEEEE------------------ETTEEEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred eeecCC---ceEEeeecCCCCceeecc------------------CCCEEEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 111111 245678889988776653 23678888877654332221 12334
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
+.++|+||+++|+.+.
T Consensus 310 ~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 310 TSLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEEECTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 6799999999887653
No 238
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00014 Score=58.84 Aligned_cols=136 Identities=11% Similarity=0.018 Sum_probs=87.9
Q ss_pred CcceEEEcCCCC-EEEEcCCCeEEEEcCCCc---------EEEe----ccccCccccceEEccCCcEEEEEeCCCeEEEE
Q 030700 11 HPEDVSVDGNGV-LYTATGDGWIKRMHPNGT---------WEDW----HQVGSQSLLGLTTTKENNVIIVCDSQQGLLKV 76 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~~~~~i~~~~~~g~---------~~~~----~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~ 76 (173)
...+++|+|+|. |+++..+|.|..|+..+. +..+ ........ .++|+|+| + .++...+.+..+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-L-aass~D~tVrlW 207 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-L-VAALSNNSVFSM 207 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-E-EEEETTCCEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-E-EEEeCCCeEEEE
Confidence 467899999985 556668899999986543 1232 12234677 99999999 6 666666666666
Q ss_pred ccCC-c-E-EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee-cccc
Q 030700 77 SEEG-V-T-VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL-DGLY 152 (173)
Q Consensus 77 ~~~g-~-~-~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~ 152 (173)
+.++ . . .......+. ......+++. |...++.. +++|..+|..+++..... ....
T Consensus 208 d~~~~~~~~~~~tL~~~h-~~~V~svaFs--g~~LASa~------------------~~tIkLWd~~~~~~~~~~~gh~~ 266 (588)
T 2j04_A 208 TVSASSHQPVSRMIQNAS-RRKITDLKIV--DYKVVLTC------------------PGYVHKIDLKNYSISSLKTGSLE 266 (588)
T ss_dssp CCCSSSSCCCEEEEECCC-SSCCCCEEEE--TTEEEEEC------------------SSEEEEEETTTTEEEEEECSCCS
T ss_pred ECCCCccccceeeecccc-cCcEEEEEEE--CCEEEEEe------------------CCeEEEEECCCCeEEEEEcCCCc
Confidence 6544 2 1 111110111 1357889998 45555421 268999998877774554 4455
Q ss_pred CcceEEE--ccCCCEEEEEe
Q 030700 153 FANGVAL--SEDERFLVVCE 170 (173)
Q Consensus 153 ~p~gi~~--~~dg~~lyv~~ 170 (173)
...+|+| +||+..|.++.
T Consensus 267 ~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 267 NFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CCCEEEETTCSSCEEEEECS
T ss_pred eEEEEEeeeCCCCCEEEEEc
Confidence 5678999 99998777654
No 239
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.19 E-value=0.00014 Score=56.33 Aligned_cols=137 Identities=10% Similarity=0.037 Sum_probs=82.6
Q ss_pred CCcceEEEcC-CCCEEEEc-CCCeEEEEcCC-C---c-EEEeccccCccccceEEccCCcEEEEEeCCC-eEEEEcc-C-
Q 030700 10 NHPEDVSVDG-NGVLYTAT-GDGWIKRMHPN-G---T-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSE-E- 79 (173)
Q Consensus 10 ~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~-g---~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~-~- 79 (173)
....+++|+| ++.++++. .++.|..|+.. + + ...+......+. .++|+++++.++++.... .|..++. .
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN-CLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE-EEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE-EEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 4578899999 66777655 78999999853 2 2 223333445677 999999887325444443 4544553 3
Q ss_pred C--cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC--------------
Q 030700 80 G--VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-------------- 142 (173)
Q Consensus 80 g--~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-------------- 142 (173)
+ ...+... . .....++++|+|. ++++.. .+++|..+|....
T Consensus 311 ~~~~~~~~~h-~----~~v~~i~~sp~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~~~~~~~~ 368 (430)
T 2xyi_A 311 KLKLHSFESH-K----DEIFQVQWSPHNETILASSG-----------------TDRRLHVWDLSKIGEEQSTEDAEDGPP 368 (430)
T ss_dssp TSCSEEEECC-S----SCEEEEEECSSCTTEEEEEE-----------------TTSCCEEEEGGGTTCCCCHHHHHHCCT
T ss_pred CCCeEEeecC-C----CCEEEEEECCCCCCEEEEEe-----------------CCCcEEEEeCCCCccccCccccccCCc
Confidence 2 3333221 1 3567899999984 666632 2356666665431
Q ss_pred eeEEeec-cccCcceEEEccCCCEEEEE
Q 030700 143 QTSLVLD-GLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 143 ~~~~~~~-~~~~p~gi~~~~dg~~lyv~ 169 (173)
++..... ....++.++|+|++++++++
T Consensus 369 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 369 ELLFIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp TEEEECCCCSSCEEEEEECSSSTTEEEE
T ss_pred ceEEEcCCCCCCceEEEECCCCCCEEEE
Confidence 2222222 23457899999999844443
No 240
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=0.00025 Score=60.37 Aligned_cols=139 Identities=6% Similarity=-0.057 Sum_probs=86.6
Q ss_pred CcceEEEcCCCC-EEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEe
Q 030700 11 HPEDVSVDGNGV-LYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVS 86 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~ 86 (173)
...+++|.| |. |..+..++.|..||. +++............ .+++++++++++++.....+..++. .+ ...+..
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp CEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred CEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 357899999 66 555558899999996 455433223344567 9999999999666655544555554 34 322211
Q ss_pred --------ccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccc------
Q 030700 87 --------QFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGL------ 151 (173)
Q Consensus 87 --------~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~------ 151 (173)
...+ .......++++|++ .++++- ..++.| .+|..+++........
T Consensus 138 ~~~~~~~~~~~~-h~~~V~sl~~sp~~~~~l~~g-----------------~~dg~v-lWd~~~~~~~~~~~~~~~~g~~ 198 (902)
T 2oaj_A 138 DNLQKSSFFPAA-RLSPIVSIQWNPRDIGTVLIS-----------------YEYVTL-TYSLVENEIKQSFIYELPPFAP 198 (902)
T ss_dssp CCHHHHHTCSSS-CCCCCCEEEEETTEEEEEEEE-----------------CSSCEE-EEETTTTEEEEEECCCBCTTCC
T ss_pred cccccccccccc-CCCCeEEEEEccCCCCEEEEE-----------------eCCCcE-EEECCCCceEEEEecccCCcCC
Confidence 0111 12357889999964 444442 134788 8998877654433321
Q ss_pred -------------cCcceEEEccCCCEEEEEe
Q 030700 152 -------------YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 152 -------------~~p~gi~~~~dg~~lyv~~ 170 (173)
...+.++|+|||++|..+.
T Consensus 199 ~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 199 GGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 3467899999999776653
No 241
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.17 E-value=0.00021 Score=59.19 Aligned_cols=139 Identities=11% Similarity=0.005 Sum_probs=89.5
Q ss_pred CCcceEEEcCCCC-EEEEcCCCeEEEEcCCC--cEEE-eccccCccccceEEcc-CCcEEEEEeCCCeEEEEcc-CC--c
Q 030700 10 NHPEDVSVDGNGV-LYTATGDGWIKRMHPNG--TWED-WHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVSE-EG--V 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~~~~~i~~~~~~g--~~~~-~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~~-~g--~ 81 (173)
....+++|.|+|. |+++..++.|..|+.+. .... +........ .++|++ ++++++++.....+..++. .+ .
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM-CVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE-EEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE-EEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 4567899999886 44555888999998543 3322 223344566 899999 7777455554444555553 34 3
Q ss_pred EEEEeccCCccccCCccEEEcC--CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCcceEE
Q 030700 82 TVLVSQFNGSQLRFANDVIEAS--DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFANGVA 158 (173)
Q Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~--dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p~gi~ 158 (173)
..+.... ......++++| +|.++++-. .++.|..+|..+++...... .......++
T Consensus 177 ~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~-----------------~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~ 235 (814)
T 3mkq_A 177 FTLTTGQ----ERGVNYVDYYPLPDKPYMITAS-----------------DDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (814)
T ss_dssp EEEECCC----TTCCCEEEECCSTTCCEEEEEC-----------------TTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred eEEecCC----CCCEEEEEEEECCCCCEEEEEe-----------------CCCEEEEEECCCCcEEEEEcCCCCCEEEEE
Confidence 3332211 13567889998 887666532 34789999988776544443 345567899
Q ss_pred EccCCCEEEEEe
Q 030700 159 LSEDERFLVVCE 170 (173)
Q Consensus 159 ~~~dg~~lyv~~ 170 (173)
|+|+++.++++.
T Consensus 236 ~~~~~~~l~~~~ 247 (814)
T 3mkq_A 236 FHPTLPIIISGS 247 (814)
T ss_dssp ECSSSSEEEEEE
T ss_pred EcCCCCEEEEEe
Confidence 999998777654
No 242
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.16 E-value=1.7e-05 Score=61.58 Aligned_cols=137 Identities=12% Similarity=0.080 Sum_probs=81.4
Q ss_pred CcceEEEcC-CCCEEE-EcCCCeEEEEcCCCcEEE-eccc---cCccccceEEccCCcEEEEEeCCCeEEEEccCC--cE
Q 030700 11 HPEDVSVDG-NGVLYT-ATGDGWIKRMHPNGTWED-WHQV---GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VT 82 (173)
Q Consensus 11 ~p~~l~~~~-~g~l~~-~~~~~~i~~~~~~g~~~~-~~~~---~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~ 82 (173)
...+|+|.| ++.+++ +..++.|..||..+.... +... ..... .+++++++++++.+.....|..++.++ ..
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDNVGNVILLNMDGKELW 244 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECSSSBEEEEESSSCBCC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeCCCcEeeeccCcceeE
Confidence 457899998 676555 448899999997665433 2211 12345 789999999944444334455555555 22
Q ss_pred EEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE-ee---ccccCcceE
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL-VL---DGLYFANGV 157 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~---~~~~~p~gi 157 (173)
.+. .. ......++++|++. ++++.. .++.|..+|..+.+... +. ......+.+
T Consensus 245 ~~~-~h----~~~v~~v~~~p~~~~~~~s~s-----------------~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 302 (435)
T 4e54_B 245 NLR-MH----KKKVTHVALNPCCDWFLATAS-----------------VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAA 302 (435)
T ss_dssp CSB-CC----SSCEEEEEECTTCSSEEEEEE-----------------TTSBCCEEETTTCCSSSCCSBCCBCSSCEEEC
T ss_pred EEe-cc----cceEEeeeecCCCceEEEEec-----------------CcceeeEEecccccccceEEEeeeccccccce
Confidence 211 11 13467899999886 555421 33567777765443211 11 112334678
Q ss_pred EEccCCCEEEEEe
Q 030700 158 ALSEDERFLVVCE 170 (173)
Q Consensus 158 ~~~~dg~~lyv~~ 170 (173)
+|+|||++|+.+.
T Consensus 303 ~~spdg~~l~s~~ 315 (435)
T 4e54_B 303 CFSPDGARLLTTD 315 (435)
T ss_dssp CBCTTSSEEEEEE
T ss_pred eECCCCCeeEEEc
Confidence 9999999877653
No 243
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.16 E-value=8.7e-05 Score=57.48 Aligned_cols=138 Identities=10% Similarity=-0.077 Sum_probs=84.4
Q ss_pred CCcceEEEcCCCC-EEE-EcCCCeEEEEcCCC-----cE----EEeccccCccccceEEcc-CCcEEEEEeCCCeEEEEc
Q 030700 10 NHPEDVSVDGNGV-LYT-ATGDGWIKRMHPNG-----TW----EDWHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVS 77 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~-~~~~~~i~~~~~~g-----~~----~~~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~ 77 (173)
....+++|+|++. +++ +..++.|..|+... .. ..+........ .+++++ ++++++.+.....|..++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 3467899999765 554 55789999998543 11 12223344567 899998 567734444344455555
Q ss_pred c-CC-----cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC-e-eEEee
Q 030700 78 E-EG-----VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN-Q-TSLVL 148 (173)
Q Consensus 78 ~-~g-----~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~-~~~~~ 148 (173)
. .+ ...+. .. ...++.++++|+|. ++++.. .++.|..+|..+. . +..+.
T Consensus 261 ~~~~~~~~~~~~~~-~~----~~~v~~i~~~p~~~~~l~tg~-----------------~dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 261 TRNNNTSKPSHTVD-AH----TAEVNCLSFNPYSEFILATGS-----------------ADKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp TTCSCSSSCSEEEE-CC----SSCEEEEEECSSCTTEEEEEE-----------------TTSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCCCcceeEee-cC----CCCeEEEEeCCCCCCEEEEEe-----------------CCCeEEEEeCCCCCCCeEEee
Confidence 3 22 22221 11 13578899999886 666521 3478888998752 2 33333
Q ss_pred ccccCcceEEEccCCCEEEEEe
Q 030700 149 DGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 149 ~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
........|+|+|+++.++++-
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEE
Confidence 3445667899999997666553
No 244
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.15 E-value=5.5e-05 Score=57.18 Aligned_cols=148 Identities=7% Similarity=-0.006 Sum_probs=83.7
Q ss_pred CcceEEEcC-CCC-EEEEc--CC----CeEEEEcCCCc-EEEeccc--cCccccceEEccCCcEEEEE-eCC--Ce--EE
Q 030700 11 HPEDVSVDG-NGV-LYTAT--GD----GWIKRMHPNGT-WEDWHQV--GSQSLLGLTTTKENNVIIVC-DSQ--QG--LL 74 (173)
Q Consensus 11 ~p~~l~~~~-~g~-l~~~~--~~----~~i~~~~~~g~-~~~~~~~--~~~p~~gl~~~~~g~l~~v~-~~~--~~--i~ 74 (173)
....+++.| +|. |++.. .. ..|+.++.++. ...+... ...+. .++|+++|+.|+++ ... .. ++
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 189 WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCT-HEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEE-EEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcccc-ceEECCCCCEEEEEecCCCCccceEE
Confidence 356788999 664 55443 22 46899987554 3443332 22456 78999999853443 321 23 77
Q ss_pred EEcc-CC-cEEEEeccCCccccCCccEEEcC-CCcEEEEeCcCCcCcccceee---ecccCCCceEEEEcCCCCeeEEee
Q 030700 75 KVSE-EG-VTVLVSQFNGSQLRFANDVIEAS-DGSLYFTVSSTKFTPAEYYLD---LVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 75 ~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~-dG~~~v~~~~~~~~~~~~~~~---~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
.++. ++ ...+.. ..+ .+ +.++| ||++++..... .+.... .........|+.+|+++++...+.
T Consensus 268 ~~d~~~g~~~~l~~-~~~-----~~-~~~s~~dg~~l~~~~~~----~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 268 KANPETLENEEVMV-MPP-----CS-HLMSNFDGSLMVGDGCD----APVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EECTTTCCEEEEEE-CCS-----EE-EEEECSSSSEEEEEECC----C----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred EEECCCCCeEEeee-CCC-----CC-CCccCCCCceEEEecCC----cceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 7775 45 444432 221 12 78899 99876653210 000000 000113368999999887765554
Q ss_pred cccc-----------CcceEEEccCCCEEEEEe
Q 030700 149 DGLY-----------FANGVALSEDERFLVVCE 170 (173)
Q Consensus 149 ~~~~-----------~p~gi~~~~dg~~lyv~~ 170 (173)
.... ....++|+|||+.|+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s 369 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTS 369 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEE
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEe
Confidence 4322 245679999999887764
No 245
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.14 E-value=6.2e-05 Score=58.80 Aligned_cols=136 Identities=13% Similarity=0.114 Sum_probs=78.8
Q ss_pred CcceEEEcCCCCEEE----Ec-CCCeEEEEcCCCc-------------EEEeccccCccccceEEccC-CcEEEEEeCCC
Q 030700 11 HPEDVSVDGNGVLYT----AT-GDGWIKRMHPNGT-------------WEDWHQVGSQSLLGLTTTKE-NNVIIVCDSQQ 71 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~----~~-~~~~i~~~~~~g~-------------~~~~~~~~~~p~~gl~~~~~-g~l~~v~~~~~ 71 (173)
...+++|+++|.+++ +. .++.|..|+.... ...+........ +++|+++ ++++..+....
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 378899999987555 44 5778888873211 111112344567 9999997 77734444444
Q ss_pred eEEEEcc-CCcEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-
Q 030700 72 GLLKVSE-EGVTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD- 149 (173)
Q Consensus 72 ~i~~~~~-~g~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~- 149 (173)
.+..++. .+......... ...+..++++|+|..+++- ..++.|..||++ ++......
T Consensus 173 ~v~iwD~~~~~~~~~~~~~---~~~v~~v~wspdg~~lasg-----------------s~dg~v~iwd~~-~~~~~~~~~ 231 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPS---TVAVTSVCWSPKGKQLAVG-----------------KQNGTVVQYLPT-LQEKKVIPC 231 (434)
T ss_dssp CEEEEEESSSEEEEEEECG---GGCEEEEEECTTSSCEEEE-----------------ETTSCEEEECTT-CCEEEEECC
T ss_pred eEEEEEcCCCcceeeccCC---CCceeEEEEcCCCCEEEEE-----------------cCCCcEEEEccC-CcccccccC
Confidence 4555553 44222111111 1357889999999755542 134789999987 43332221
Q ss_pred cc-------cCcceEEEccCCCEEEE
Q 030700 150 GL-------YFANGVALSEDERFLVV 168 (173)
Q Consensus 150 ~~-------~~p~gi~~~~dg~~lyv 168 (173)
.. .....++|++++.++.+
T Consensus 232 ~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 232 PPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp CTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred CcccCCCCceeEEEEEEecCceEEEE
Confidence 11 13457888888765543
No 246
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.13 E-value=0.00012 Score=54.15 Aligned_cols=140 Identities=7% Similarity=0.007 Sum_probs=85.2
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCCC--c--EE-EeccccCccccceEEcc-CCcEEEEEeCCCeEEEEc--cC--
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPNG--T--WE-DWHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVS--EE-- 79 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g--~--~~-~~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~--~~-- 79 (173)
..+.++++++++ ++++..++.|..|+... . .. .......... .+++++ ++++++++.....+...+ ..
T Consensus 151 ~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 151 NKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIR-DVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp CCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEE-EEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred CceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCcee-EEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 456789999887 77777888999998643 2 11 2223344567 999999 998855554443333322 33
Q ss_pred ----C-cEEEEeccC---C-ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc
Q 030700 80 ----G-VTVLVSQFN---G-SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG 150 (173)
Q Consensus 80 ----g-~~~~~~~~~---~-~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 150 (173)
. ...+..... + ........++++|+|.++++- ..++.|..+|..+++.......
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-----------------~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 229 DYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA-----------------GSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp STTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE-----------------ETTSCEEEEETTTTEEEEECCC
T ss_pred ccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe-----------------cCCceEEEEcCccHhHhhhhhc
Confidence 2 333322110 0 001256789999999855552 1347899999988775444443
Q ss_pred c--cCcceEEEccCCCEEEEEe
Q 030700 151 L--YFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 ~--~~p~gi~~~~dg~~lyv~~ 170 (173)
. .....++ |++++|+.+-
T Consensus 292 ~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 292 FNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp CSSSEEEEEE--ECSSEEEEEE
T ss_pred ccCCCceEec--CCCCeEEEEe
Confidence 2 3345677 8998877653
No 247
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.13 E-value=0.00028 Score=53.72 Aligned_cols=135 Identities=19% Similarity=0.132 Sum_probs=83.3
Q ss_pred cceEEEcCC-C-CEEEEcCCCeEEEEcC-CCcEEE-ec-----cccCccccceEEcc-CCcEEEEEeCCCe-EEEEcc--
Q 030700 12 PEDVSVDGN-G-VLYTATGDGWIKRMHP-NGTWED-WH-----QVGSQSLLGLTTTK-ENNVIIVCDSQQG-LLKVSE-- 78 (173)
Q Consensus 12 p~~l~~~~~-g-~l~~~~~~~~i~~~~~-~g~~~~-~~-----~~~~~p~~gl~~~~-~g~l~~v~~~~~~-i~~~~~-- 78 (173)
...+++.|+ + .|+.+..++.|..||. +++... +. ....... .+++++ ++++ +++...++ +...+.
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~-l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANM-FISGSCDTTVRLWDLRI 237 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCE-EEEEETTSCEEEEETTT
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCE-EEEEECCCeEEEEECCC
Confidence 445667774 3 4666668899999995 454432 21 1122345 777766 7788 54444444 444443
Q ss_pred CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc------
Q 030700 79 EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG------ 150 (173)
Q Consensus 79 ~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~------ 150 (173)
.+ ...+.. .. ...+.++++|+|..+++-. .++.|..+|..+++.......
T Consensus 238 ~~~~~~~~~~-h~----~~v~~v~~~p~~~~l~s~s-----------------~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 238 TSRAVRTYHG-HE----GDINSVKFFPDGQRFGTGS-----------------DDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp TCCCCEEECC-CS----SCCCEEEECTTSSEEEEEC-----------------SSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CCcceEEECC-cC----CCeEEEEEecCCCeEEEEc-----------------CCCeEEEEECCCCcEEEEecccccccc
Confidence 22 333321 11 3578899999998877732 457899999987765444322
Q ss_pred --ccCcceEEEccCCCEEEEEe
Q 030700 151 --LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 151 --~~~p~gi~~~~dg~~lyv~~ 170 (173)
......++|+|+|++|+...
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEEC
T ss_pred cccCceEEEEECCCCCEEEEEE
Confidence 12357899999999887753
No 248
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.10 E-value=0.00024 Score=53.64 Aligned_cols=138 Identities=9% Similarity=-0.005 Sum_probs=81.7
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCCC-cEEEec--------------cccCccccceEEcc-CCcEEEEEeCC
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPNG-TWEDWH--------------QVGSQSLLGLTTTK-ENNVIIVCDSQ 70 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~g-~~~~~~--------------~~~~~p~~gl~~~~-~g~l~~v~~~~ 70 (173)
-....++++.| ++.++++. .++.|..|+.+. ...... ....... .+++++ ++++++.+...
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEEETT
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEEeCC
Confidence 35567899999 88766544 788899998543 211110 1334566 899998 66674555444
Q ss_pred CeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCC---CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 71 QGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASD---GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 71 ~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~d---G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
..+..++. .+ ...... .. .....+.+.+. +.++++. ..++.|..+|..+++..
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~v~~~d~~~~~~~ 179 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FE----ETVYSHHMSPVSTKHCLVAVG-----------------TRGPKVQLCDLKSGSCS 179 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CS----SCEEEEEECSSCSSCCEEEEE-----------------ESSSSEEEEESSSSCCC
T ss_pred CeEEEeeCCCCccceecc-CC----CceeeeEeecCCCCCcEEEEE-----------------cCCCeEEEEeCCCccee
Confidence 44555554 44 222222 11 23456777764 3355542 13478888998776543
Q ss_pred Eeec-cccCcceEEEccCCCE-EEEE
Q 030700 146 LVLD-GLYFANGVALSEDERF-LVVC 169 (173)
Q Consensus 146 ~~~~-~~~~p~gi~~~~dg~~-lyv~ 169 (173)
.... .......++|+|+++. ++++
T Consensus 180 ~~~~~~~~~v~~~~~~~~~~~ll~~~ 205 (408)
T 4a11_B 180 HILQGHRQEILAVSWSPRYDYILATA 205 (408)
T ss_dssp EEECCCCSCEEEEEECSSCTTEEEEE
T ss_pred eeecCCCCcEEEEEECCCCCcEEEEE
Confidence 3333 3455678999999985 4443
No 249
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00014 Score=58.25 Aligned_cols=138 Identities=9% Similarity=0.022 Sum_probs=85.4
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC-CcE--EEeccccCccccce--EEccCC-cEEEEEeCCCeEEEEc-c-CC-
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN-GTW--EDWHQVGSQSLLGL--TTTKEN-NVIIVCDSQQGLLKVS-E-EG- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~--~~~~~~~~~p~~gl--~~~~~g-~l~~v~~~~~~i~~~~-~-~g- 80 (173)
....+++|.+++.|..+..++.|..||.. +.. ..+........ .+ +++++| ++ +++...++.+++. . ++
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~-laS~S~D~tvklWD~~~~~ 344 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTV-VSTVAVDGYFYIFNPKDIA 344 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCE-EEEEETTSEEEEECGGGHH
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeE-EEEeccCCeEEEEECCCCC
Confidence 34567889887767677789999999964 421 22223334455 77 567787 77 5554455555554 3 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee-EEeeccccCcceEE
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT-SLVLDGLYFANGVA 158 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~p~gi~ 158 (173)
...+...... .....++++|+|..+++.. .++.|..+|..++.. ..+.......+.|+
T Consensus 345 ~~~~~~~~~~~---~~v~~v~fsp~~~~l~s~~-----------------~d~tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 345 TTKTTVSRFRG---SNLVPVVYCPQIYSYIYSD-----------------GASSLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp HHCEEEEECSC---CSCCCEEEETTTTEEEEEC-----------------SSSEEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred ccccccccccc---CcccceEeCCCcCeEEEeC-----------------CCCcEEEEECcccccceeeecCCCceEEEE
Confidence 3333322211 1356799999998777632 235788888876653 33334455678999
Q ss_pred EccCCCEEEEE
Q 030700 159 LSEDERFLVVC 169 (173)
Q Consensus 159 ~~~dg~~lyv~ 169 (173)
|+|+|+.|..+
T Consensus 405 ~Sp~g~~l~Sg 415 (524)
T 2j04_B 405 VSRLHPMVLAG 415 (524)
T ss_dssp CCSSCCBCEEE
T ss_pred eCCCCCeEEEE
Confidence 99999876544
No 250
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.07 E-value=0.00057 Score=50.93 Aligned_cols=140 Identities=14% Similarity=0.063 Sum_probs=79.1
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCCC---cEEEec--c-ccCccccceEEccCCcEEEEEeCCCeEEEEccCC-c-
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPNG---TWEDWH--Q-VGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG-V- 81 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g---~~~~~~--~-~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g-~- 81 (173)
....+++++++ .|..+..++.|..|+... ...... . ...... .++|++++++|..+.....+...+... .
T Consensus 15 ~~v~~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 15 EKIWSFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp SCEEEEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC-----
T ss_pred CceeeeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcC
Confidence 34566888777 444445888898888543 222222 1 334466 899999999845444333344333321 0
Q ss_pred ----EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCC-C---eeEEee-cccc
Q 030700 82 ----TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST-N---QTSLVL-DGLY 152 (173)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~---~~~~~~-~~~~ 152 (173)
......+.+. ......++++|+|+++++-. .++.|..+|... + +..... ....
T Consensus 93 ~~~~~~~~~~~~~h-~~~V~~v~~sp~g~~las~s-----------------~D~~v~iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 93 RTFEMDLLAIIEGH-ENEVKGVAWSNDGYYLATCS-----------------RDKSVWIWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp --CCCEEEEEEC-----CEEEEEECTTSCEEEEEE-----------------TTSCEEEEECCTTCCCCEEEEEECCCSS
T ss_pred ccccceeEEEEcCC-CCcEEEEEECCCCCEEEEEe-----------------CCCEEEEEeccCCCCCeEEEEEeccCCC
Confidence 0111112221 13567899999998777632 346788888732 2 222222 2344
Q ss_pred CcceEEEccCCCEEEEE
Q 030700 153 FANGVALSEDERFLVVC 169 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~ 169 (173)
..+.++|+|+++.|+.+
T Consensus 155 ~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 155 DVKHVIWHPSEALLASS 171 (330)
T ss_dssp CEEEEEECSSSSEEEEE
T ss_pred ceEEEEECCCCCEEEEE
Confidence 56789999999877654
No 251
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.07 E-value=0.00078 Score=49.37 Aligned_cols=137 Identities=12% Similarity=0.096 Sum_probs=77.1
Q ss_pred CCccCCcceEEEcCCCCEEEEc-CCCeEEEEcCCC---c-EEEeccccCccccceEEcc--CCcEEEEEeCCCeEEEEcc
Q 030700 6 EGIVNHPEDVSVDGNGVLYTAT-GDGWIKRMHPNG---T-WEDWHQVGSQSLLGLTTTK--ENNVIIVCDSQQGLLKVSE 78 (173)
Q Consensus 6 ~~~~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g---~-~~~~~~~~~~p~~gl~~~~--~g~l~~v~~~~~~i~~~~~ 78 (173)
.+--....+++++++|..+++. .++.|..|+.++ + ...+....+... .++|++ ++++|+.+.....+...+.
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 3333456789999999766555 788898888643 2 223333444566 899975 3788444443333444443
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCC--CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe---eEEeeccc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASD--GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ---TSLVLDGL 151 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~d--G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~ 151 (173)
.+ ...+... .+. ....+.++++|+ |.++++- ..++.|..+|..++. ...+....
T Consensus 85 ~~~~~~~~~~~-~~h-~~~v~~v~~~p~~~g~~l~s~-----------------s~d~~v~~wd~~~~~~~~~~~~~~h~ 145 (297)
T 2pm7_B 85 ENGRWSQIAVH-AVH-SASVNSVQWAPHEYGPMLLVA-----------------SSDGKVSVVEFKENGTTSPIIIDAHA 145 (297)
T ss_dssp SSSCBCCCEEE-CCC-SSCEEEEEECCGGGCSEEEEE-----------------ETTSEEEEEEBCSSSCBCCEEEECCS
T ss_pred CCCceEEEEEe-ecC-CCceeEEEeCcCCCCcEEEEE-----------------ECCCcEEEEEecCCCceeeeeeeccc
Confidence 34 2221111 111 134678999987 7666652 134677777765432 12222223
Q ss_pred cCcceEEEccC
Q 030700 152 YFANGVALSED 162 (173)
Q Consensus 152 ~~p~gi~~~~d 162 (173)
...+.++|+|+
T Consensus 146 ~~v~~~~~~p~ 156 (297)
T 2pm7_B 146 IGVNSASWAPA 156 (297)
T ss_dssp SCEEEEEECCC
T ss_pred CccceEeecCC
Confidence 44567888886
No 252
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.00036 Score=53.69 Aligned_cols=144 Identities=12% Similarity=0.119 Sum_probs=84.4
Q ss_pred cCCcceEEEcC-CCCEEEEc-CCCeEEEEcCC----Cc-E--EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-
Q 030700 9 VNHPEDVSVDG-NGVLYTAT-GDGWIKRMHPN----GT-W--EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~~~~-~~~~i~~~~~~----g~-~--~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~- 78 (173)
-....++++.| +|.++++. .++.|..|+.. +. . ........... .+++++++++++.+.....+..++.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVT-QITMIPNFDAFAVSSKDGQIIVLKVN 141 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEEec
Confidence 35678899999 88766555 88889888842 32 1 11112345567 9999999998555544443433332
Q ss_pred ---CC-cEEEEec-----cCCc---cccCCccEE--EcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 79 ---EG-VTVLVSQ-----FNGS---QLRFANDVI--EASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 79 ---~g-~~~~~~~-----~~~~---~~~~~~~l~--~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
.+ ....... +.-. .......+. .++++.++++- ..++.|..+|..+++.
T Consensus 142 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------------~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 142 HYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL-----------------TNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE-----------------ETTSEEEEEETTTCCE
T ss_pred cccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE-----------------eCCCeEEEEeCCCCee
Confidence 33 2111110 0000 001222333 44666655542 2457999999987765
Q ss_pred EEeecc---ccCcceEEEccCCCEEEEEe
Q 030700 145 SLVLDG---LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 145 ~~~~~~---~~~p~gi~~~~dg~~lyv~~ 170 (173)
...... ....+.++|+|++++|+.+.
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 233 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECCVLILGT 233 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSCEEEEEE
T ss_pred eEEEccCCCCCceEEEEECCCCCEEEEEc
Confidence 444433 45678899999999887764
No 253
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.04 E-value=0.0002 Score=52.50 Aligned_cols=98 Identities=14% Similarity=0.153 Sum_probs=56.5
Q ss_pred CCcceEEEcCC--CCEE-EEcCCCeEEEEcC-CCcEE-Ee-------------ccccCccccceEEccC---CcEEEEEe
Q 030700 10 NHPEDVSVDGN--GVLY-TATGDGWIKRMHP-NGTWE-DW-------------HQVGSQSLLGLTTTKE---NNVIIVCD 68 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~-~~~~~~~i~~~~~-~g~~~-~~-------------~~~~~~p~~gl~~~~~---g~l~~v~~ 68 (173)
....++++.|+ +.++ ++..++.|..||. +++.. .+ ........ .++++++ +++++++.
T Consensus 111 ~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~l~~~~ 189 (351)
T 3f3f_A 111 GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDF-CLSWCPSRFSPEKLAVSA 189 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCE-EEEECCCSSSCCEEEEEE
T ss_pred CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccccee-EEEeccCCCCCcEEEEec
Confidence 45678999997 8755 4458889999984 33211 00 01223456 8888886 77755555
Q ss_pred CCCeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCCC----cEEEE
Q 030700 69 SQQGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASDG----SLYFT 110 (173)
Q Consensus 69 ~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~dG----~~~v~ 110 (173)
....++..+. .+ ...+.. ..+. ......++++|+| .++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~-~~~h-~~~i~~~~~~p~~~~~~~~l~s 235 (351)
T 3f3f_A 190 LEQAIIYQRGKDGKLHVAAK-LPGH-KSLIRSISWAPSIGRWYQLIAT 235 (351)
T ss_dssp TTEEEEEEECTTSCEEEEEE-CCCC-CSCEEEEEECCCSSCSSEEEEE
T ss_pred CCCcEEEEccCCCceeeeee-cCCC-CcceeEEEECCCCCCcceEEEE
Confidence 4444433333 44 333322 2221 1356789999998 56655
No 254
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.03 E-value=0.00051 Score=51.80 Aligned_cols=139 Identities=12% Similarity=0.032 Sum_probs=84.1
Q ss_pred cCCcceEEEcC-CCCEE-EEcCCCeEEEEcCC-CcEEEeccccCccccceEEcc---CCcEEEEEeCCCeEEEEcc-CC-
Q 030700 9 VNHPEDVSVDG-NGVLY-TATGDGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTK---ENNVIIVCDSQQGLLKVSE-EG- 80 (173)
Q Consensus 9 ~~~p~~l~~~~-~g~l~-~~~~~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~---~g~l~~v~~~~~~i~~~~~-~g- 80 (173)
-....++++.| ++.++ .+..++.|..|+.. ++............ .+.+.+ ++.+++++.....+..++. .+
T Consensus 99 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 177 (408)
T 4a11_B 99 RYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS 177 (408)
T ss_dssp SSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSC
T ss_pred CCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc
Confidence 34577899999 66555 45578999999864 44443333444455 777776 4457455555555666664 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe--eEEe---------
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ--TSLV--------- 147 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~--------- 147 (173)
...+. ... .....++++|++. ++++.. .++.|..+|..++. ...+
T Consensus 178 ~~~~~~-~~~----~~v~~~~~~~~~~~ll~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 235 (408)
T 4a11_B 178 CSHILQ-GHR----QEILAVSWSPRYDYILATAS-----------------ADSRVKLWDVRRASGCLITLDQHNGKKSQ 235 (408)
T ss_dssp CCEEEC-CCC----SCEEEEEECSSCTTEEEEEE-----------------TTSCEEEEETTCSSCCSEECCTTTTCSCC
T ss_pred eeeeec-CCC----CcEEEEEECCCCCcEEEEEc-----------------CCCcEEEEECCCCCcccccccccccccce
Confidence 33332 111 3467899999987 565521 34678888876443 1111
Q ss_pred ------eccccCcceEEEccCCCEEEEEe
Q 030700 148 ------LDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 148 ------~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.........++|+|++++|+++.
T Consensus 236 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 236 AVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred eeccccccccCceeEEEEcCCCCEEEEec
Confidence 11123456899999999888764
No 255
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.03 E-value=0.00052 Score=52.19 Aligned_cols=104 Identities=17% Similarity=0.276 Sum_probs=67.4
Q ss_pred cCCcceEEE--cC-CCC--EEEEcCCCeEEEEcC----CCc----EEEeccccCccccceEEccCCcEEEEEeCCCeEEE
Q 030700 9 VNHPEDVSV--DG-NGV--LYTATGDGWIKRMHP----NGT----WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLK 75 (173)
Q Consensus 9 ~~~p~~l~~--~~-~g~--l~~~~~~~~i~~~~~----~g~----~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~ 75 (173)
+..|.|+|. ++ .|. +|+++.++.+..|.. +|. +.+-...++.|. |+++|+....||+++...+|++
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~E-gcvvDd~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTE-GMAADDEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEE-EEEEETTTTEEEEEETTTEEEE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcc-eEEEcCCCCeEEEecccceEEE
Confidence 578999999 77 464 667777788877542 332 223234567899 9999976545599998889999
Q ss_pred Ec--cCC--cEEEEeccCCccc-cCCccEEEc--CCC--cEEEEeCc
Q 030700 76 VS--EEG--VTVLVSQFNGSQL-RFANDVIEA--SDG--SLYFTVSS 113 (173)
Q Consensus 76 ~~--~~g--~~~~~~~~~~~~~-~~~~~l~~~--~dG--~~~v~~~~ 113 (173)
++ +++ ...+.....+..+ ..+.+|++. ++| .+++++..
T Consensus 206 ~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 206 FSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp EECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred EeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 99 333 2223333322222 368999995 444 47777633
No 256
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.01 E-value=0.0002 Score=60.90 Aligned_cols=135 Identities=11% Similarity=0.046 Sum_probs=84.6
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcCCCcE-EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEE
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHPNGTW-EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVL 84 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~~g~~-~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~ 84 (173)
....+++|+|+|.+.++. .++.|..|+..+.. ........... .++|++ |++|+.+.....+..++. ++ ...+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIK-EMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEE-EEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEE-EEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 457889999999877555 88999999865533 22223334456 999999 776355544444554553 44 3333
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee------------cccc
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL------------DGLY 152 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~------------~~~~ 152 (173)
. .. .....++++|+|..+++- ..++.|..||.++++..... ....
T Consensus 96 ~--~~----~~V~~v~~sp~g~~l~sg-----------------s~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~ 152 (902)
T 2oaj_A 96 F--VP----GKITSIDTDASLDWMLIG-----------------LQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLS 152 (902)
T ss_dssp E--CS----SCEEEEECCTTCSEEEEE-----------------ETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCC
T ss_pred c--CC----CCEEEEEECCCCCEEEEE-----------------cCCCcEEEEECCCCccccceeccccccccccccCCC
Confidence 2 11 356789999999865542 23478999998877653211 1123
Q ss_pred CcceEEEccCC-CEEEEE
Q 030700 153 FANGVALSEDE-RFLVVC 169 (173)
Q Consensus 153 ~p~gi~~~~dg-~~lyv~ 169 (173)
....|+|+|++ +.++++
T Consensus 153 ~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 153 PIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp CCCEEEEETTEEEEEEEE
T ss_pred CeEEEEEccCCCCEEEEE
Confidence 45789999963 445443
No 257
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.00 E-value=3.2e-05 Score=63.61 Aligned_cols=144 Identities=8% Similarity=-0.079 Sum_probs=78.9
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCC-CcEEEecccc-------------------CccccceEEccCCcEEEEEeCC
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPN-GTWEDWHQVG-------------------SQSLLGLTTTKENNVIIVCDSQ 70 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~~~~~~~~-------------------~~p~~gl~~~~~g~l~~v~~~~ 70 (173)
....++|+|+|+.++...++.|+.++.+ |+...+...+ .... +++|+|||+.|+++...
T Consensus 111 ~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~-~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY-ALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC-CEEECTTSSEEEEEEEE
T ss_pred ccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc-cEEECCCCCEEEEEEEC
Confidence 4677999999954333345789999864 4443332111 1125 79999999875554321
Q ss_pred -C---------------------------------eEEEEccCC--cE---EEEec--cCCccccCCccEEEcCCCcEEE
Q 030700 71 -Q---------------------------------GLLKVSEEG--VT---VLVSQ--FNGSQLRFANDVIEASDGSLYF 109 (173)
Q Consensus 71 -~---------------------------------~i~~~~~~g--~~---~~~~~--~~~~~~~~~~~l~~~~dG~~~v 109 (173)
. .+..++.++ .. .+... ..+ .......++++|||++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS-SDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT-SCEEEEEEEESSSSEEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC-CcceEEEeEEeCCCeEEE
Confidence 1 233333322 10 11000 000 012346789999998766
Q ss_pred EeCcCCcCcccceeeecccCCCceEEEEc----CCCCeeEEee----cc-ccCcc-----eEEEccCCCEEEEE
Q 030700 110 TVSSTKFTPAEYYLDLVSGEPHGVLLKYD----PSTNQTSLVL----DG-LYFAN-----GVALSEDERFLVVC 169 (173)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d----~~~~~~~~~~----~~-~~~p~-----gi~~~~dg~~lyv~ 169 (173)
+.... ......|+.+| +++++...+. .+ -...+ .++|+|||+.+++.
T Consensus 269 ~~~~~-------------~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 269 QWLKR-------------VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEEES-------------STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred EEecc-------------ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 62110 11224789999 8777655444 11 12222 78999999977663
No 258
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.99 E-value=0.00015 Score=60.44 Aligned_cols=142 Identities=14% Similarity=0.046 Sum_probs=84.3
Q ss_pred CCcceEEEcCC--CCEEE-EcCCCeEEEEcCCCc----EEEeccccCccccceEEcc-------------CCcEEEEEeC
Q 030700 10 NHPEDVSVDGN--GVLYT-ATGDGWIKRMHPNGT----WEDWHQVGSQSLLGLTTTK-------------ENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~~-~~~~~~i~~~~~~g~----~~~~~~~~~~p~~gl~~~~-------------~g~l~~v~~~ 69 (173)
....++++.|+ |.+++ +..++.|..|+.... ............ .+++++ ++++++++..
T Consensus 100 ~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~-~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 100 ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEE-EEEECCCC---------CGGGCCEEEEET
T ss_pred CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceE-EEEecCcccccccccccCCCCCEEEEEEC
Confidence 45678999997 86654 448899999985332 222223344556 888888 4777455554
Q ss_pred CCeEEEEcc-CC--cEEEEeccCCccccCCccEEEcCC---CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 70 QQGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEASD---GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 70 ~~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~d---G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
...+..++. .+ .........+. ......++++|+ |.++++.. .++.|..+|..+++
T Consensus 179 dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~~sp~~~~~~~l~s~s-----------------~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 179 DNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVAWSPTVLLRSYLASVS-----------------QDRTCIIWTQDNEQ 240 (753)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEEECCCCSSSEEEEEEE-----------------SSSCEEEEEESSSS
T ss_pred CCeEEEEeccCCcccceeeeeecCC-CCcEEEEEeccCCCCCCEEEEEe-----------------cCCEEEEecCCCCC
Confidence 444554542 33 22222222221 135688999999 77666632 34678888876542
Q ss_pred eE---Eeec---cccCcceEEEccCCCEEEEEe
Q 030700 144 TS---LVLD---GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ~~---~~~~---~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.. .... .......++|+|+++.++++.
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s 273 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEEc
Confidence 11 1111 234456899999999877653
No 259
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.98 E-value=0.00028 Score=52.48 Aligned_cols=136 Identities=7% Similarity=0.017 Sum_probs=78.9
Q ss_pred CcceEEEcCCCC-EEEEc-C----CCeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeC--------------
Q 030700 11 HPEDVSVDGNGV-LYTAT-G----DGWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDS-------------- 69 (173)
Q Consensus 11 ~p~~l~~~~~g~-l~~~~-~----~~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~-------------- 69 (173)
....++|+|+|. |++.. . ...|+.++.+ |+...+..... .. .++++|||+.|+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 456789999985 55444 2 1248888865 44444433333 67 8999999986565531
Q ss_pred -------------CCeEEEEcc-CC-c-EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCce
Q 030700 70 -------------QQGLLKVSE-EG-V-TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGV 133 (173)
Q Consensus 70 -------------~~~i~~~~~-~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 133 (173)
...++.++. .| . ..+.. + ....++++||| ++++........ ...+...
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~~~~~~--------~~~~~~~ 201 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPHREIIP--------QYFKFWD 201 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEECCCSSC--------CSSCCEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEecccccc--------ccccccc
Confidence 134676775 44 4 44432 1 45778999999 766532100000 0001358
Q ss_pred EEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEE
Q 030700 134 LLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 134 v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
|+.+| +++.+.+... ... ..++|||+.|+++
T Consensus 202 l~~~d--~~~~~~l~~~-~~~--~~~spdg~~l~~~ 232 (347)
T 2gop_A 202 IYIWE--DGKEEKMFEK-VSF--YAVDSDGERILLY 232 (347)
T ss_dssp EEEEE--TTEEEEEEEE-ESE--EEEEECSSCEEEE
T ss_pred EEEeC--CCceEEeccC-cce--eeECCCCCEEEEE
Confidence 99999 5776666544 221 2338898877654
No 260
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.98 E-value=0.0013 Score=48.70 Aligned_cols=113 Identities=9% Similarity=-0.002 Sum_probs=70.9
Q ss_pred cCCcceEEEcCC---CCEE-EEcCCCeEEEEcCC--CcEE--EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-C
Q 030700 9 VNHPEDVSVDGN---GVLY-TATGDGWIKRMHPN--GTWE--DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-E 79 (173)
Q Consensus 9 ~~~p~~l~~~~~---g~l~-~~~~~~~i~~~~~~--g~~~--~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~ 79 (173)
-....+++++|+ |.++ .+..++.|..|+.+ +... .+........ .+++++++++++.+.....+..++. .
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 356788999997 5655 44588888888854 4432 3333455667 9999999998555554444555554 4
Q ss_pred C-cEEEEeccCCccccCCccEEE--cCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 80 G-VTVLVSQFNGSQLRFANDVIE--ASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 80 g-~~~~~~~~~~~~~~~~~~l~~--~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
+ ...+.. .. .....+++ +++|.++++.. .++.|..+|..+++.
T Consensus 118 ~~~~~~~~-~~----~~v~~~~~~~~~~~~~l~~~~-----------------~dg~i~vwd~~~~~~ 163 (368)
T 3mmy_A 118 NQAIQIAQ-HD----APVKTIHWIKAPNYSCVMTGS-----------------WDKTLKFWDTRSSNP 163 (368)
T ss_dssp TEEEEEEE-CS----SCEEEEEEEECSSCEEEEEEE-----------------TTSEEEEECSSCSSC
T ss_pred CCceeecc-cc----CceEEEEEEeCCCCCEEEEcc-----------------CCCcEEEEECCCCcE
Confidence 4 322221 11 34677888 88887666532 346788888766543
No 261
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.95 E-value=0.00085 Score=48.73 Aligned_cols=133 Identities=12% Similarity=0.163 Sum_probs=80.4
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCCCc-EEEeccccCccccceEEcc-CCcEEEEEeCCCeEEEEccCC-cEEEEec
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPNGT-WEDWHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVSEEG-VTVLVSQ 87 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~-~~~~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~~~g-~~~~~~~ 87 (173)
...+++++ +..++++..++.|..|+ .++ ...+........ .+++.+ ++++++++.....+..++... ...+...
T Consensus 106 ~i~~~~~~-~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 182 (313)
T 3odt_A 106 NVCSLSFQ-DGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVW-DAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGI 182 (313)
T ss_dssp CEEEEEEE-TTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEE-EEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSS
T ss_pred CEEEEEec-CCEEEEEeCCCCEEEEc-CCcEEEecccCCCcee-EEEEccCCCCEEEEEECCCCEEEEecCceEEEEecc
Confidence 34556663 33455555888899998 443 333333444556 788877 778855555444454444322 3333211
Q ss_pred cCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-cccCcceEEEccCCCEE
Q 030700 88 FNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLYFANGVALSEDERFL 166 (173)
Q Consensus 88 ~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~p~gi~~~~dg~~l 166 (173)
. ......++++|+|.++.+. .++.|..+|..+++...... .......++|+|+++ +
T Consensus 183 ~----~~~i~~~~~~~~~~~~~~~------------------~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-l 239 (313)
T 3odt_A 183 H----NDVVRHLAVVDDGHFISCS------------------NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGD-I 239 (313)
T ss_dssp C----SSCEEEEEEEETTEEEEEE------------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSC-E
T ss_pred C----cccEEEEEEcCCCeEEEcc------------------CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCC-E
Confidence 1 2356789999999855443 34789999988776544433 345568899999985 4
Q ss_pred EEE
Q 030700 167 VVC 169 (173)
Q Consensus 167 yv~ 169 (173)
+.+
T Consensus 240 ~~~ 242 (313)
T 3odt_A 240 VSC 242 (313)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 262
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.95 E-value=0.00029 Score=58.47 Aligned_cols=150 Identities=9% Similarity=0.056 Sum_probs=81.5
Q ss_pred ceEEEcCCCC-EEEEcCC---------CeEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC
Q 030700 13 EDVSVDGNGV-LYTATGD---------GWIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 13 ~~l~~~~~g~-l~~~~~~---------~~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g 80 (173)
.+++++|+|. |.++..+ +.++.+|.. |+...+....+... ..+|+|||+.+.++ ..+.|+.++. .|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~-~~~~i~~~~~~~~ 142 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYV-WNNDIYVKIEPNL 142 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEE-ETTEEEEESSTTS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEE-ECCeEEEEECCCC
Confidence 3478899986 4444322 567788864 44444433344556 88999999864444 3456887775 44
Q ss_pred -cEEEEeccCCcc----------------ccCCccEEEcCCCc-EEEEeCcCCcCcccc--------------eeee---
Q 030700 81 -VTVLVSQFNGSQ----------------LRFANDVIEASDGS-LYFTVSSTKFTPAEY--------------YLDL--- 125 (173)
Q Consensus 81 -~~~~~~~~~~~~----------------~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~--------------~~~~--- 125 (173)
...+.. ++.. +.....+.++|||+ |.++.... .....+ ...+
T Consensus 143 ~~~~lt~--~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~-~~v~~~~~~~~~~~~~~~~~~~~~~yp 219 (740)
T 4a5s_A 143 PSYRITW--TGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND-TEVPLIEYSFYSDESLQYPKTVRVPYP 219 (740)
T ss_dssp CCEECCS--CCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC-TTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred ceEEEcC--CCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc-cCCceEEEEeecCCCCCCCcceeecCC
Confidence 443321 1111 12335689999997 44432110 001100 0000
Q ss_pred cc--cCCCceEEEEcCCC---C---eeEEeec------cccCcceEEEccCCCEEE
Q 030700 126 VS--GEPHGVLLKYDPST---N---QTSLVLD------GLYFANGVALSEDERFLV 167 (173)
Q Consensus 126 ~~--~~~~~~v~~~d~~~---~---~~~~~~~------~~~~p~gi~~~~dg~~ly 167 (173)
.. ..+..+|+.+|.++ + ++..+.. .......++|+|||+.++
T Consensus 220 ~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~ 275 (740)
T 4a5s_A 220 KAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISL 275 (740)
T ss_dssp BTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEE
T ss_pred CCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEE
Confidence 01 12234789999987 6 4444432 223345789999998443
No 263
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.95 E-value=0.00044 Score=57.50 Aligned_cols=110 Identities=11% Similarity=0.118 Sum_probs=71.6
Q ss_pred cceEEEcCCCCEEE-EcCCCeEEEEcCC-CcEEEeccc----cCccccceEEccCCcEEEEEeCCCeEEEEccC-C-cEE
Q 030700 12 PEDVSVDGNGVLYT-ATGDGWIKRMHPN-GTWEDWHQV----GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G-VTV 83 (173)
Q Consensus 12 p~~l~~~~~g~l~~-~~~~~~i~~~~~~-g~~~~~~~~----~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g-~~~ 83 (173)
..+++.|++|.||+ +...+.|+++++. ++...+... ...+. ++..|.+|++ |++.. .|+.++++. + .+.
T Consensus 474 i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l-Wigt~-~Gl~~~~~~~~~~~~ 550 (758)
T 3ott_A 474 INQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPN-YLLCDEDGLL-WVGFH-GGVMRINPKDESQQS 550 (758)
T ss_dssp EEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEE-EEEECTTSCE-EEEET-TEEEEECC--CCCCB
T ss_pred eeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccc-eEEECCCCCE-EEEec-CceEEEecCCCceEE
Confidence 56788899999998 3334669999975 444444211 12456 8888999999 88764 589999864 4 433
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
+. ..+.+...+..+..+ +|++|++.. ..|.++++++.+...
T Consensus 551 ~~--~~gl~~~~i~~i~~~-~g~lWi~t~-------------------~Gl~~~~~~~~~~~~ 591 (758)
T 3ott_A 551 IS--FGSFSNNEILSMTCV-KNSIWVSTT-------------------NGLWIIDRKTMDARQ 591 (758)
T ss_dssp CC--CCC---CCEEEEEEE-TTEEEEEES-------------------SCEEEEETTTCCEEE
T ss_pred ec--ccCCCccceEEEEEC-CCCEEEECC-------------------CCeEEEcCCCceeEE
Confidence 31 123333455667665 899999853 368888888765543
No 264
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.94 E-value=0.0011 Score=48.62 Aligned_cols=141 Identities=12% Similarity=0.044 Sum_probs=77.2
Q ss_pred CCcceEEEcCC--CCEEE-EcCCCeEEEEcCC-Cc---EEEeccccCccccceEEccC-------------CcEEEEEeC
Q 030700 10 NHPEDVSVDGN--GVLYT-ATGDGWIKRMHPN-GT---WEDWHQVGSQSLLGLTTTKE-------------NNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~~-~~~~~~i~~~~~~-g~---~~~~~~~~~~p~~gl~~~~~-------------g~l~~v~~~ 69 (173)
....++++.|+ |.+++ +..++.|..|+.. +. ...+........ .++++++ +++|+.+..
T Consensus 100 ~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~~~~~~~~~~~~~l~sgs~ 178 (297)
T 2pm7_B 100 ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVN-SASWAPATIEEDGEHNGTKESRKFVTGGA 178 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEE-EEEECCCC------------CCEEEEEET
T ss_pred CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccc-eEeecCCcccccccCCCCCCcceEEEEcC
Confidence 34568999985 76554 4488888888853 21 122223333455 7888876 456344443
Q ss_pred CCeEEEEcc-CC-c-EEEEeccCCccccCCccEEEcCCC---cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 70 QQGLLKVSE-EG-V-TVLVSQFNGSQLRFANDVIEASDG---SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 70 ~~~i~~~~~-~g-~-~~~~~~~~~~~~~~~~~l~~~~dG---~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
...+...+. .+ . ..+...+.+.. .....++++|++ .++++- ..++.|..+|.++..
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l~~H~-~~V~~v~~sp~~~~~~~las~-----------------s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYMASV-----------------SQDRTCIIWTQDNEQ 240 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEE-----------------ETTSCEEEEEESSTT
T ss_pred CCcEEEEEEcCCCceEEEEEEecCCC-CceEEEEECCCCCCceEEEEE-----------------ECCCcEEEEEeCCCC
Confidence 333444442 33 1 11222222211 356889999985 555552 134667777665421
Q ss_pred ---eEEee--cc-ccCcceEEEccCCCEEEEE
Q 030700 144 ---TSLVL--DG-LYFANGVALSEDERFLVVC 169 (173)
Q Consensus 144 ---~~~~~--~~-~~~p~gi~~~~dg~~lyv~ 169 (173)
..... .. ......++|+|+++.|..+
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~ 272 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEE
Confidence 11222 11 2345689999999877655
No 265
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.94 E-value=0.00033 Score=58.34 Aligned_cols=138 Identities=14% Similarity=0.116 Sum_probs=80.2
Q ss_pred ecCCccCCcceEEEcCCCCEE-EEcCCCeEEEEcCCC---cEE-EeccccCccccceEEccC--CcEEEEEeCCCeEEEE
Q 030700 4 LGEGIVNHPEDVSVDGNGVLY-TATGDGWIKRMHPNG---TWE-DWHQVGSQSLLGLTTTKE--NNVIIVCDSQQGLLKV 76 (173)
Q Consensus 4 ~~~~~~~~p~~l~~~~~g~l~-~~~~~~~i~~~~~~g---~~~-~~~~~~~~p~~gl~~~~~--g~l~~v~~~~~~i~~~ 76 (173)
+..+--....+++++|+|.++ .+..++.|..|+..+ ... .+........ +++++++ +++++.+.....+...
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEE
Confidence 334444567789999988644 555889999888542 222 2223344566 8999877 8884555444445555
Q ss_pred cc-CC-cEEEEeccCCccccCCccEEEcCC--CcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe---eEEeec
Q 030700 77 SE-EG-VTVLVSQFNGSQLRFANDVIEASD--GSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ---TSLVLD 149 (173)
Q Consensus 77 ~~-~g-~~~~~~~~~~~~~~~~~~l~~~~d--G~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~ 149 (173)
+. ++ ....... .+. ......++++|+ |.++++- ..++.|..+|..++. ......
T Consensus 83 d~~~~~~~~~~~~-~~h-~~~V~~v~~sp~~~~~~l~sg-----------------s~dg~I~vwdl~~~~~~~~~~~~~ 143 (753)
T 3jro_A 83 KEENGRWSQIAVH-AVH-SASVNSVQWAPHEYGPLLLVA-----------------SSDGKVSVVEFKENGTTSPIIIDA 143 (753)
T ss_dssp EEETTEEEEEEEE-CCC-SSCEEEEEECCGGGCSEEEEE-----------------ETTSEEEEEECCSSSCCCCEEEEC
T ss_pred ECCCCcccccccc-cCC-CCCeEEEEECCCCCCCEEEEE-----------------eCCCcEEEEEeecCCCcceeEeec
Confidence 53 44 2222221 111 135678999998 8766652 234788888876552 222223
Q ss_pred cccCcceEEEcc
Q 030700 150 GLYFANGVALSE 161 (173)
Q Consensus 150 ~~~~p~gi~~~~ 161 (173)
.......++|+|
T Consensus 144 ~~~~v~~l~~~p 155 (753)
T 3jro_A 144 HAIGVNSASWAP 155 (753)
T ss_dssp CSSCEEEEEECC
T ss_pred CCCceEEEEecC
Confidence 344557788888
No 266
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.93 E-value=4.2e-05 Score=61.51 Aligned_cols=60 Identities=18% Similarity=0.396 Sum_probs=49.0
Q ss_pred ccCCcceEEEcCCCCEEE-EcC------------CCeEEEEcC-CCcEEEeccc--cCccccceEEccCCcEEEEEe
Q 030700 8 IVNHPEDVSVDGNGVLYT-ATG------------DGWIKRMHP-NGTWEDWHQV--GSQSLLGLTTTKENNVIIVCD 68 (173)
Q Consensus 8 ~~~~p~~l~~~~~g~l~~-~~~------------~~~i~~~~~-~g~~~~~~~~--~~~p~~gl~~~~~g~l~~v~~ 68 (173)
.+..|.+|+++++|.||| +|. +..++++++ +|++..+... ...|+ |++|+||++.|||+.
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpn-GiafSPD~ktLfV~v 549 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVT-GISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEE-EEEECTTSSEEEEEE
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCcccc-CCEECCCCCEEEEEE
Confidence 589999999999999999 663 127999997 6787776543 35689 999999999989875
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.91 E-value=0.00044 Score=52.54 Aligned_cols=132 Identities=8% Similarity=0.091 Sum_probs=76.5
Q ss_pred CCCEEE-EcCCCeEEEEcCCCcEEEeccccCccccceEEccC----C---cEEEEEeCC--C-e--EEEEcc-CC-cEEE
Q 030700 20 NGVLYT-ATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKE----N---NVIIVCDSQ--Q-G--LLKVSE-EG-VTVL 84 (173)
Q Consensus 20 ~g~l~~-~~~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~----g---~l~~v~~~~--~-~--i~~~~~-~g-~~~~ 84 (173)
...+++ ++..+.++.+|.+|+.....+. +.++ ++.+-++ | .++|+++.. . . ++.+++ .+ +..+
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~-g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT-GKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC-SCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC-CCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 345554 5577889999999987766443 5666 6666542 1 155888876 4 3 344454 33 3333
Q ss_pred Eec--cCCccccCCccEEE--cCC-Cc--EEEEeCcCCcCcccceeeecccCCCceEEEEcC---CCCe--eEEe--ecc
Q 030700 85 VSQ--FNGSQLRFANDVIE--ASD-GS--LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDP---STNQ--TSLV--LDG 150 (173)
Q Consensus 85 ~~~--~~~~~~~~~~~l~~--~~d-G~--~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~---~~~~--~~~~--~~~ 150 (173)
... .-+.....|.++++ +++ |. +|+++.. +++..|.. ..+. .+++ ...
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~------------------G~~~q~~l~~~~~g~~~~~lVR~f~l 178 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE------------------GEFEQYELKADKNGYISGKKVRAFKM 178 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS------------------SEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC------------------CeEEEEEEEeCCCCcccceEEEEecC
Confidence 221 00122368999999 774 54 5555422 44443222 2231 1222 122
Q ss_pred ccCcceEEEccCCCEEEEEec
Q 030700 151 LYFANGVALSEDERFLVVCES 171 (173)
Q Consensus 151 ~~~p~gi~~~~dg~~lyv~~~ 171 (173)
...|.|++++++..+|||++=
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eE 199 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEE 199 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEET
T ss_pred CCCcceEEEcCCCCeEEEecc
Confidence 467889999999899999873
No 268
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.91 E-value=0.00041 Score=51.51 Aligned_cols=114 Identities=11% Similarity=0.060 Sum_probs=70.2
Q ss_pred CCcceEEEcCC----CCEE-EEcCCCeEEEEcC-CCcEEE-eccccCccccceEEcc-CCcEEEEEeCCCeEEEEcc-CC
Q 030700 10 NHPEDVSVDGN----GVLY-TATGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTK-ENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 10 ~~p~~l~~~~~----g~l~-~~~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~-~g~l~~v~~~~~~i~~~~~-~g 80 (173)
....+++|.|+ |.++ ++..++.|..|+. +++... +........ .+++++ ++++++.+.....+..++. ++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecC
Confidence 34677899887 5455 4558899999995 455433 333455667 999999 8888555554444555564 44
Q ss_pred -cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 81 -VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 81 -~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
.........+ ....+..++++|+|..+++-. .++.|..+|..++
T Consensus 149 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~ 193 (366)
T 3k26_A 149 TLVAIFGGVEG-HRDEVLSADYDLLGEKIMSCG-----------------MDHSLKLWRINSK 193 (366)
T ss_dssp EEEEEECSTTS-CSSCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESCSH
T ss_pred eEEEEeccccc-ccCceeEEEECCCCCEEEEec-----------------CCCCEEEEECCCC
Confidence 2222211111 113578899999998666532 2367777777654
No 269
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.91 E-value=0.00037 Score=57.50 Aligned_cols=141 Identities=10% Similarity=0.042 Sum_probs=78.5
Q ss_pred cceEEEcCCCCEE-EE-cCCC----eEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCC-------------
Q 030700 12 PEDVSVDGNGVLY-TA-TGDG----WIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ------------- 71 (173)
Q Consensus 12 p~~l~~~~~g~l~-~~-~~~~----~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~------------- 71 (173)
..+++|+|+|+.. ++ +..| .|+.++.+ |+............ ++++++||+.|+++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccC
Confidence 4578999998633 33 3222 78889864 44443222222245 799999998766664332
Q ss_pred ---eEEEEcc-CC-c--EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCC--
Q 030700 72 ---GLLKVSE-EG-V--TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPST-- 141 (173)
Q Consensus 72 ---~i~~~~~-~g-~--~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-- 141 (173)
.|++++. .+ . ..+..... .+ ....++.++|||+ ++++.... ......|+.+|.++
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~-~~-~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~ 270 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPD-EP-KWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQES 270 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTT-CT-TCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSS
T ss_pred CCCEEEEEECCCCcccceEEeccCC-CC-eEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECcccc
Confidence 2666664 33 2 22222111 01 2345789999997 44442110 01135788888765
Q ss_pred ----C--eeEEeeccccCcceEEEccCCCEEEEE
Q 030700 142 ----N--QTSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 142 ----~--~~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
+ ....+....... .-.|++||+.||+.
T Consensus 271 ~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~ 303 (710)
T 2xdw_A 271 NGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFK 303 (710)
T ss_dssp SSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEE
T ss_pred cccCCccceEEeeCCCCcE-EEEEeccCCEEEEE
Confidence 4 345554433222 23578888888775
No 270
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.88 E-value=0.00035 Score=52.72 Aligned_cols=148 Identities=12% Similarity=0.100 Sum_probs=79.2
Q ss_pred cceEEEcCCCC-EEEE-cC--CCeEEEEcCCC-cEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C-cEEE
Q 030700 12 PEDVSVDGNGV-LYTA-TG--DGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G-VTVL 84 (173)
Q Consensus 12 p~~l~~~~~g~-l~~~-~~--~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g-~~~~ 84 (173)
...++++|+|+ |++. +. ...|+.++.++ +...+.........++.+++||+.|+++.....++.++.+ + ...+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 56788999985 4444 32 34688888654 4444433333323147899999886666555568888864 4 4444
Q ss_pred EeccCCccccCCccEEEcCCCcEE-EEeCc---------CCcCcccceeeec---ccCCCceEEEEcCCCCeeEEeeccc
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLY-FTVSS---------TKFTPAEYYLDLV---SGEPHGVLLKYDPSTNQTSLVLDGL 151 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~-v~~~~---------~~~~~~~~~~~~~---~~~~~~~v~~~d~~~~~~~~~~~~~ 151 (173)
.....+ ..++|..+ ++... ..+.+......+. .......|+.+|.++++...+....
T Consensus 118 ~~~~~~----------~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~ 187 (396)
T 3c5m_A 118 YTVDEE----------WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT 187 (396)
T ss_dssp EECCTT----------EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES
T ss_pred Eecccc----------cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC
Confidence 331111 12222211 11000 0000000000000 0124468999999888877666555
Q ss_pred cCcceEEEcc-CCCEEEEE
Q 030700 152 YFANGVALSE-DERFLVVC 169 (173)
Q Consensus 152 ~~p~gi~~~~-dg~~lyv~ 169 (173)
.....++|+| |++.|+++
T Consensus 188 ~~~~~~~~sp~dg~~l~~~ 206 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFC 206 (396)
T ss_dssp SCEEEEEEETTEEEEEEEE
T ss_pred cccccceECCCCCCEEEEE
Confidence 5567889999 77755543
No 271
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.00074 Score=51.88 Aligned_cols=139 Identities=7% Similarity=0.058 Sum_probs=79.1
Q ss_pred CCcceEEEcCCCCEEE-EcCCCeEEEEcC----CCcEEEec-----------c--ccCccccceE--EccCCcEEEEEeC
Q 030700 10 NHPEDVSVDGNGVLYT-ATGDGWIKRMHP----NGTWEDWH-----------Q--VGSQSLLGLT--TTKENNVIIVCDS 69 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~-~~~~~~i~~~~~----~g~~~~~~-----------~--~~~~p~~gl~--~~~~g~l~~v~~~ 69 (173)
....++++.|++.+++ +..++.|..|+. +++..... + ...... .+. +++++++++.+..
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 190 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTN 190 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEET
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeC
Confidence 3467899999886554 448888888874 44332211 1 112223 344 4467888555554
Q ss_pred CCeEEEEcc-CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 70 QQGLLKVSE-EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 70 ~~~i~~~~~-~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
...+..++. .+ ...+.... .......++++|+|.++++- ..++.|..+|..+++...
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~-----------------~~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSP---RHGAVSSICIDEECCVLILG-----------------TTRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCG---GGCCEEEEEECTTSCEEEEE-----------------ETTSCEEEEETTTTEEEE
T ss_pred CCeEEEEeCCCCeeeEEEccCC---CCCceEEEEECCCCCEEEEE-----------------cCCCeEEEEEcCCccEEE
Confidence 445555554 44 33332210 11367889999999876653 234788889988776544
Q ss_pred ee--ccccCcceEEEc----cCCCEEEEE
Q 030700 147 VL--DGLYFANGVALS----EDERFLVVC 169 (173)
Q Consensus 147 ~~--~~~~~p~gi~~~----~dg~~lyv~ 169 (173)
.. ........++++ ++++.|+.+
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEE
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEE
Confidence 33 223344567444 456555543
No 272
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.82 E-value=0.00064 Score=50.55 Aligned_cols=145 Identities=8% Similarity=-0.028 Sum_probs=80.5
Q ss_pred CCcceEEEcCCC-CEEEEc---------CCCeEEEEcCCC-cEEEeccccCccccceEEccCCcEEEEEeC-C----CeE
Q 030700 10 NHPEDVSVDGNG-VLYTAT---------GDGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKENNVIIVCDS-Q----QGL 73 (173)
Q Consensus 10 ~~p~~l~~~~~g-~l~~~~---------~~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~-~----~~i 73 (173)
..+.++++ +| .+++.. ....|+.++.++ +...+ .... .++++|||+.|+++.. . ..+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~-~~~~SpDg~~la~~~~~~~~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENAT-MPRISPDGKKIAFMRANEEKKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCE-EEEECTTSSEEEEEEEETTTTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCC-CeEECCCCCEEEEEEeccCCCcceE
Confidence 44566777 55 444331 145688888654 44433 3456 7899999976554432 1 237
Q ss_pred EEEccC-C-cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccc-eeee--------cccCCCceEEEEcCCC
Q 030700 74 LKVSEE-G-VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEY-YLDL--------VSGEPHGVLLKYDPST 141 (173)
Q Consensus 74 ~~~~~~-g-~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~-~~~~--------~~~~~~~~v~~~d~~~ 141 (173)
+.++.+ | ...+... . . ...++++|||+ |+++.....-..... ...+ ........|+++|.++
T Consensus 88 ~~~~~~~g~~~~l~~~-~----~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 88 WVADLETLSSKKILEA-K----N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEETTTTEEEEEEEE-S----E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred EEEECCCCceEEEEcC-C----C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 777754 4 4443322 1 1 57789999996 555531100000000 0000 0001135899999988
Q ss_pred Cee-EEeeccccCcceEEEccCCCEEEEEe
Q 030700 142 NQT-SLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 142 ~~~-~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
++. +.+.. . ....++|+||| .+|++.
T Consensus 162 ~~~~~~l~~-~-~~~~~~~spdg-~~~~~~ 188 (347)
T 2gop_A 162 EEVIEEFEK-P-RFSSGIWHRDK-IVVNVP 188 (347)
T ss_dssp TEEEEEEEE-E-TTCEEEEETTE-EEEEEE
T ss_pred CeEEeeecC-C-CcccccCCCCe-EEEEEe
Confidence 877 55544 2 66789999999 777663
No 273
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.76 E-value=0.0038 Score=48.30 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=81.7
Q ss_pred cCCcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEE-EeccccCccccceEEc--cCCcEEEEEeCCCeEEEEcc-CC--c
Q 030700 9 VNHPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTT--KENNVIIVCDSQQGLLKVSE-EG--V 81 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~--~~g~l~~v~~~~~~i~~~~~-~g--~ 81 (173)
-....++++.+++.++.+..++.|..|+. +++.. .+........ .+++. +++++++.+.....+...+. .+ .
T Consensus 162 ~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 162 DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp SSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccE-EEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 34567889988886666668899999985 45433 3333344555 78887 56777455544444554443 22 1
Q ss_pred EEEE-------------------eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 82 TVLV-------------------SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 82 ~~~~-------------------~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
.... ....+ ....-..++++|.++++ ...++.|..+|..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~-----------------~~~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRG---HMASVRTVSGHGNIVVS-----------------GSYDNTLIVWDVAQM 300 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECC---CSSCEEEEEEETTEEEE-----------------EETTSCEEEEETTTT
T ss_pred ccccccCCcceEeeccCCCeEEEEEccC---ccceEEEEcCCCCEEEE-----------------EeCCCeEEEEECCCC
Confidence 1110 00000 11112234555554444 224578999998877
Q ss_pred eeEEeecc-ccCcceEEEccCCCEEEEEe
Q 030700 143 QTSLVLDG-LYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 143 ~~~~~~~~-~~~p~gi~~~~dg~~lyv~~ 170 (173)
+......+ ......++|+|+++.++.+.
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEEE
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEEe
Confidence 65544443 45567899999999887764
No 274
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.68 E-value=0.0026 Score=47.88 Aligned_cols=81 Identities=14% Similarity=0.128 Sum_probs=47.6
Q ss_pred cCCCeEEEEcCCC-c-----------------EEEeccccCccccceEEccCCcEEEEEeCCCeEEEE-cc-CC--cEEE
Q 030700 27 TGDGWIKRMHPNG-T-----------------WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKV-SE-EG--VTVL 84 (173)
Q Consensus 27 ~~~~~i~~~~~~g-~-----------------~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~-~~-~g--~~~~ 84 (173)
..+|.|..||... + ...+........ .++|+++|++|+.+.....++++ +. ++ ...+
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 3667788887532 2 233333445567 99999999994444444332554 43 45 3333
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEe
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTV 111 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~ 111 (173)
..... ......++++|+|+++++.
T Consensus 235 ~~g~h---~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 235 RRGLD---RADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp ECTTC---CSCEEEEEECTTSCEEEEE
T ss_pred EcCCC---CCcEEEEEECCCCCEEEEE
Confidence 21101 1356889999999877763
No 275
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.67 E-value=0.00091 Score=49.51 Aligned_cols=98 Identities=17% Similarity=0.166 Sum_probs=57.9
Q ss_pred CCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCcE---EEeccccCccccceEEcc--CCcEEEEEeCCCeEEEEcc-CC-
Q 030700 10 NHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTW---EDWHQVGSQSLLGLTTTK--ENNVIIVCDSQQGLLKVSE-EG- 80 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~---~~~~~~~~~p~~gl~~~~--~g~l~~v~~~~~~i~~~~~-~g- 80 (173)
....+++++++|.++++. .++.|..|+. +++. ..+........ .++|++ ++++|+.+.....+...+. .+
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 445789999998766555 7888888885 3432 22333344566 899975 4777455544444444453 44
Q ss_pred cEEEEeccCCccccCCccEEEcCC--CcEEEE
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASD--GSLYFT 110 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~d--G~~~v~ 110 (173)
...... ..+. ....+.++++|+ |.++++
T Consensus 93 ~~~~~~-~~~h-~~~V~~v~~~p~~~g~~las 122 (316)
T 3bg1_A 93 WEKSHE-HAGH-DSSVNSVCWAPHDYGLILAC 122 (316)
T ss_dssp CCEEEE-ECCC-SSCCCEEEECCTTTCSCEEE
T ss_pred ceEEEE-ccCC-CCceEEEEECCCCCCcEEEE
Confidence 222221 1111 135788999997 666665
No 276
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.65 E-value=0.0021 Score=48.60 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=63.4
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEeccCCccccCC
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVSQFNGSQLRFA 96 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~ 96 (173)
++.+|++..++.++.+|+ +|+.. |........ ++..+ ++++ |++.....++.++. +| ........... ..
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~-w~~~~~~~~-~~~~~-~~~l-~~~~~~g~l~~~d~~tG~~~w~~~~~~~~---~~ 311 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIM-WKRELGSVN-DFIVD-GNRI-YLVDQNDRVMALTIDGGVTLWTQSDLLHR---LL 311 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEE-EEECCCCEE-EEEEE-TTEE-EEEETTCCEEEEETTTCCEEEEECTTTTS---CC
T ss_pred CCEEEEEecCcEEEEEECCCCcEE-eeccCCCCC-CceEE-CCEE-EEEcCCCeEEEEECCCCcEEEeecccCCC---cc
Confidence 678999887889999996 56543 322233344 56554 5566 88877778999995 67 33322212111 22
Q ss_pred ccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 97 NDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 97 ~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
....+. +|.+|+++. +|.|+.+|+++|+..
T Consensus 312 ~~~~~~-~~~l~v~~~------------------~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 312 TSPVLY-NGNLVVGDS------------------EGYLHWINVEDGRFV 341 (376)
T ss_dssp CCCEEE-TTEEEEECT------------------TSEEEEEETTTCCEE
T ss_pred cCCEEE-CCEEEEEeC------------------CCeEEEEECCCCcEE
Confidence 233443 578999853 378999999888753
No 277
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.64 E-value=0.0052 Score=47.48 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=75.9
Q ss_pred EcCCCC-EEEEcCCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEEEeccCC
Q 030700 17 VDGNGV-LYTATGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVLVSQFNG 90 (173)
Q Consensus 17 ~~~~g~-l~~~~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~~~~~~~ 90 (173)
+.+++. ++++..++.|..||. +++.. .+........ .+++++++++++.+.....+..++. ++ ...+. ...
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~h~- 352 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIY-STIYDHERKRCISASMDTTIRIWDLENGELMYTLQ-GHT- 352 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC-CCS-
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-CCC-
Confidence 345555 445558889999985 44433 3333445567 8999999998555554444555554 55 23321 111
Q ss_pred ccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEEe
Q 030700 91 SQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 91 ~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.....+.++ +..+++- ..++.|..+|..++..............++|+++++.+..+.
T Consensus 353 ---~~v~~~~~~--~~~l~s~-----------------s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 353 ---ALVGLLRLS--DKFLVSA-----------------AADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp ---SCEEEEEEC--SSEEEEE-----------------ETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred ---CcEEEEEEc--CCEEEEE-----------------eCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 234556665 4444442 134788888887665444443344456678888888766553
No 278
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.63 E-value=0.0015 Score=46.55 Aligned_cols=94 Identities=14% Similarity=0.033 Sum_probs=61.9
Q ss_pred ccccceEEccCCcEEEEEeCCCeEEEEcc-CC--------cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCccc
Q 030700 50 QSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--------VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAE 120 (173)
Q Consensus 50 ~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--------~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~ 120 (173)
... .++|+|+|+| |+. ....++++++ ++ .+.+... +. +....+.+|++|.||++.
T Consensus 42 ~~~-~laf~P~G~L-YaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~--Gw--~~F~a~~fD~~G~LYav~--------- 105 (236)
T 1tl2_A 42 NFK-FLFLSPGGEL-YGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNG--GW--NQFQFLFFDPNGYLYAVS--------- 105 (236)
T ss_dssp TCS-EEEECTTSCE-EEE-ETTEEEEESCCCSTTCCHHHHCEEEECS--CG--GGCSEEEECTTSCEEEEE---------
T ss_pred cce-eEEECCCccE-EEE-eCCeEEEECCCCCCcccccccccEeccc--cc--ccceEEEECCCCCEEEeC---------
Confidence 456 8999999998 987 4446888885 42 2333221 11 235779999999999982
Q ss_pred ceeeecccCCCceEEEEcCCCCee-------EEee-ccccCcceEEEccCCCEEEEEe
Q 030700 121 YYLDLVSGEPHGVLLKYDPSTNQT-------SLVL-DGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 121 ~~~~~~~~~~~~~v~~~d~~~~~~-------~~~~-~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
+|.|+|+++.+... .++. .+...-.-|.++|+|. ||...
T Consensus 106 ----------dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~ 152 (236)
T 1tl2_A 106 ----------KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH 152 (236)
T ss_dssp ----------TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE
T ss_pred ----------CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe
Confidence 27999999843211 2222 2334446789999996 77654
No 279
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.59 E-value=0.0028 Score=52.11 Aligned_cols=140 Identities=11% Similarity=0.047 Sum_probs=75.3
Q ss_pred cceEEEcCCCCEE--EEcC----CCeEEEEcCCC-cEEEeccccCc-cccceEEccCCcEEEEEeCCC------------
Q 030700 12 PEDVSVDGNGVLY--TATG----DGWIKRMHPNG-TWEDWHQVGSQ-SLLGLTTTKENNVIIVCDSQQ------------ 71 (173)
Q Consensus 12 p~~l~~~~~g~l~--~~~~----~~~i~~~~~~g-~~~~~~~~~~~-p~~gl~~~~~g~l~~v~~~~~------------ 71 (173)
..+++|+|+|+.. ..+. ...|+.++.++ +.......... .. +++|++||+.|+++....
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 4578999999644 3332 24688998654 43301111112 26 899999998756654322
Q ss_pred -eEEEEcc-CC-c-EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEE
Q 030700 72 -GLLKVSE-EG-V-TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSL 146 (173)
Q Consensus 72 -~i~~~~~-~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 146 (173)
.|++++. .+ . ..+.-...+.+ ....++.++|||+ ++++.... .....|+.++..+++.+.
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~--------------~~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDP-TTFLQSDLSRDGKYLFVYILRG--------------WSENDVYWKRPGEKDFRL 266 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCT-TCEEEEEECTTSCCEEEEEEET--------------TTEEEEEEECTTCSSCEE
T ss_pred CEEEEEECCCCchhceEEEecCCCC-EEEEEEEECCCCCEEEEEEeCC--------------CCceEEEEEcCCCCceEE
Confidence 2777764 33 2 22221111111 2345789999996 54443210 022478888776666666
Q ss_pred eeccccCcceEEEccCCCEEEEE
Q 030700 147 VLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 147 ~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
+...........+ ++|+ +|+.
T Consensus 267 l~~~~~~~~~~~~-~~g~-l~~~ 287 (695)
T 2bkl_A 267 LVKGVGAKYEVHA-WKDR-FYVL 287 (695)
T ss_dssp EEECSSCCEEEEE-ETTE-EEEE
T ss_pred eecCCCceEEEEe-cCCc-EEEE
Confidence 6554433334444 5666 5553
No 280
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.59 E-value=0.012 Score=44.11 Aligned_cols=154 Identities=8% Similarity=-0.025 Sum_probs=78.7
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCCCcEEEeccccCccccceEEccCCcEEEEEeCCCe-EEEEcc-CC--cEEEE
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPNGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQG-LLKVSE-EG--VTVLV 85 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~-i~~~~~-~g--~~~~~ 85 (173)
....+++|+|+|.++++..+..+..|+.+.............. .+++.++++.+.++....+ +..++. ++ ...+.
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~ 98 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK 98 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE
Confidence 4567899999998887665555666764432222212222344 5677777777455544443 444453 45 22221
Q ss_pred eccCCccccCCccEEEcC-------CCcEEEEeCcCC-cCcccc-----------eeeecc-cCCCceEEEEcCCCCe--
Q 030700 86 SQFNGSQLRFANDVIEAS-------DGSLYFTVSSTK-FTPAEY-----------YLDLVS-GEPHGVLLKYDPSTNQ-- 143 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~-------dG~~~v~~~~~~-~~~~~~-----------~~~~~~-~~~~~~v~~~d~~~~~-- 143 (173)
.. .....+.+++ ++.+++=+.... ..+... ...... +..+|.|..+|..++.
T Consensus 99 --~~----~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~ 172 (355)
T 3vu4_A 99 --VD----APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSA 172 (355)
T ss_dssp --CS----SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC----
T ss_pred --CC----CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcc
Confidence 11 1223344443 444444332211 000000 000111 4567889999987654
Q ss_pred ---------------eEEeeccccCcceEEEccCCCEEEEEe
Q 030700 144 ---------------TSLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 144 ---------------~~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
...+...-...+.++|+|||++|..+.
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s 214 (355)
T 3vu4_A 173 TTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCS 214 (355)
T ss_dssp --------------CCEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEe
Confidence 333333345567899999999776653
No 281
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.57 E-value=0.015 Score=44.54 Aligned_cols=152 Identities=10% Similarity=0.012 Sum_probs=80.0
Q ss_pred CcceEEEcCCCCEEEE-cCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEccC-C---cEE
Q 030700 11 HPEDVSVDGNGVLYTA-TGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G---VTV 83 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~-~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g---~~~ 83 (173)
...+|+|.|+|.++++ ..++.|..|+. +++... +........ .+ +.+++++..+.....+...+.. . ...
T Consensus 149 ~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~--s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 149 YISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SL--SWNSYILSSGSRSGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EE--EEETTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EE--eeCCCEEEEEeCCCceeEeeecccceeeEE
Confidence 3578999999976654 48899999985 454433 222233333 44 4455673444433344444432 2 222
Q ss_pred EEeccCCccccCCccEEEcCCCcEEEE----------eCcCCcC----cc------c---------ceee-e--cccCCC
Q 030700 84 LVSQFNGSQLRFANDVIEASDGSLYFT----------VSSTKFT----PA------E---------YYLD-L--VSGEPH 131 (173)
Q Consensus 84 ~~~~~~~~~~~~~~~l~~~~dG~~~v~----------~~~~~~~----~~------~---------~~~~-~--~~~~~~ 131 (173)
+... . .....+.+.++|..+++ +...... .. . .... + ..+..+
T Consensus 226 ~~~h-~----~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D 300 (420)
T 4gga_A 226 LSGH-S----QEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 300 (420)
T ss_dssp EECC-S----SCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTT
T ss_pred eccc-c----cceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCC
Confidence 2111 1 12334444444443332 2111000 00 0 0000 0 113456
Q ss_pred ceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEEEe
Q 030700 132 GVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 132 ~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
+.|..+|..+++.............++|+++++.++++-
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 788889998887666665566677899999998887753
No 282
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.57 E-value=0.0081 Score=46.07 Aligned_cols=140 Identities=11% Similarity=0.080 Sum_probs=83.3
Q ss_pred cCCcceEEEcCCCCEEEEc-CCCeEEEEcC-CCc-----EEEeccccCccccceEEccCC-cEEEEEe-CCCeEEEE-cc
Q 030700 9 VNHPEDVSVDGNGVLYTAT-GDGWIKRMHP-NGT-----WEDWHQVGSQSLLGLTTTKEN-NVIIVCD-SQQGLLKV-SE 78 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~-----~~~~~~~~~~p~~gl~~~~~g-~l~~v~~-~~~~i~~~-~~ 78 (173)
.....++.+.++|..+++. .++.+..++. .++ ............ .+++++.+ ++++++. ..++.+++ +.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~-~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK-AVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEE-EEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCcee-eeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 3456678888888766544 7788888874 232 122223344556 88898865 4533332 22344444 43
Q ss_pred -CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcc
Q 030700 79 -EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFAN 155 (173)
Q Consensus 79 -~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~ 155 (173)
++ ....... . ..+..+.+.+++..+++.. +..++.|..+|..+++......+ .....
T Consensus 309 ~t~~~~~~~~~--~---~~v~~~~~~~~~~~lv~~s---------------g~~d~~I~iwd~~~~~~v~~l~gH~~~V~ 368 (420)
T 4gga_A 309 CSGACLSAVDA--H---SQVCSILWSPHYKELISGH---------------GFAQNQLVIWKYPTMAKVAELKGHTSRVL 368 (420)
T ss_dssp TTTEEEEEEEC--S---SCEEEEEEETTTTEEEEEE---------------CTTTCCEEEEETTTCCEEEEECCCSSCEE
T ss_pred Cccccceeecc--c---cceeeeeecCCCCeEEEEE---------------ecCCCEEEEEECCCCcEEEEEcCCCCCEE
Confidence 55 2222211 1 3457788899887555421 11347899999887765444443 45568
Q ss_pred eEEEccCCCEEEEE
Q 030700 156 GVALSEDERFLVVC 169 (173)
Q Consensus 156 gi~~~~dg~~lyv~ 169 (173)
.|+|+|||++|+.+
T Consensus 369 ~l~~spdg~~l~S~ 382 (420)
T 4gga_A 369 SLTMSPDGATVASA 382 (420)
T ss_dssp EEEECTTSSCEEEE
T ss_pred EEEEcCCCCEEEEE
Confidence 89999999977654
No 283
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.52 E-value=0.0041 Score=47.50 Aligned_cols=65 Identities=12% Similarity=0.164 Sum_probs=41.1
Q ss_pred CCcceEEEcC--------CCCEEEEc-CCCeEEEEcC-CCc-EEEeccccCccccceEEccCCc-EEEEEeCCCeEEEE
Q 030700 10 NHPEDVSVDG--------NGVLYTAT-GDGWIKRMHP-NGT-WEDWHQVGSQSLLGLTTTKENN-VIIVCDSQQGLLKV 76 (173)
Q Consensus 10 ~~p~~l~~~~--------~g~l~~~~-~~~~i~~~~~-~g~-~~~~~~~~~~p~~gl~~~~~g~-l~~v~~~~~~i~~~ 76 (173)
....+|+|.| +|+++++. .++.|..||. ++. ............ .++|+|++. +|+.+. .++.+++
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~-~d~~v~~ 213 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGE-RNGNIRI 213 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEE-TTSEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecC-CCCEEEE
Confidence 3456788876 67777766 7888888985 343 333434455567 999999874 534443 4444444
No 284
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.49 E-value=0.014 Score=44.32 Aligned_cols=135 Identities=13% Similarity=-0.064 Sum_probs=71.2
Q ss_pred eEEEcC---CCCEEEEc-CCCeEEEEcC-CCcEEEecc-cc---CccccceEEccCCcEEEEEeC-----------CCeE
Q 030700 14 DVSVDG---NGVLYTAT-GDGWIKRMHP-NGTWEDWHQ-VG---SQSLLGLTTTKENNVIIVCDS-----------QQGL 73 (173)
Q Consensus 14 ~l~~~~---~g~l~~~~-~~~~i~~~~~-~g~~~~~~~-~~---~~p~~gl~~~~~g~l~~v~~~-----------~~~i 73 (173)
.+++.+ ++.++++. .++.|..||. +|+...... .. .... .++|+|+|+++.++.. ..+.
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~-~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVC-HKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCE-EEEEEETTEEEEEEC------------CCEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeE-EEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 456666 56778775 7888999995 576544322 11 1334 5689999988433221 1222
Q ss_pred EEE-cc-CC--cEEEEec-cCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 74 LKV-SE-EG--VTVLVSQ-FNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 74 ~~~-~~-~g--~~~~~~~-~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
+++ +. +| ...+.-. .++.. -.-+..+.+|.+.++ ...+++|..+|..+++.....
T Consensus 262 IklWd~~tgk~l~v~~~~~p~Gh~---~~~lsg~~sg~~lAS-----------------gS~DgTIkIWDl~tGk~l~tL 321 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPGQA---GRFLEGDVKDHCAAA-----------------ILTSGTIAIWDLLLGQCTALL 321 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTTCC---CCEEEEEEETTEEEE-----------------EETTSCEEEEETTTCSEEEEE
T ss_pred EEEEECCCCEEEEEEEeeccCCCc---ceeEccccCCCEEEE-----------------EcCCCcEEEEECCCCcEEEEe
Confidence 332 33 33 1111100 01110 011112222333333 234578999999988866555
Q ss_pred cc-ccCcc-eEEEccCCCEEEEE
Q 030700 149 DG-LYFAN-GVALSEDERFLVVC 169 (173)
Q Consensus 149 ~~-~~~p~-gi~~~~dg~~lyv~ 169 (173)
.+ ...+. .++|+|||++|+-+
T Consensus 322 ~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 322 PPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp CCC--CCCCEEEECSSSSEEEEE
T ss_pred cCCCCCeEEEEEECCCCCEEEEE
Confidence 43 33344 58999999988754
No 285
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.47 E-value=0.006 Score=50.27 Aligned_cols=141 Identities=11% Similarity=0.012 Sum_probs=74.0
Q ss_pred CCcceEEEcCCCC--EEEEcCC----CeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCC------------
Q 030700 10 NHPEDVSVDGNGV--LYTATGD----GWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ------------ 70 (173)
Q Consensus 10 ~~p~~l~~~~~g~--l~~~~~~----~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~------------ 70 (173)
....+++++|+|+ +|..+.. ..|+.+|. +|+............ +++|+ ||+.||++...
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCC
Confidence 3456789999986 3344433 35778885 455443211111135 78899 88765665433
Q ss_pred -CeEEEEcc-CC--c-EEEEeccCC-ccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC-
Q 030700 71 -QGLLKVSE-EG--V-TVLVSQFNG-SQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN- 142 (173)
Q Consensus 71 -~~i~~~~~-~g--~-~~~~~~~~~-~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~- 142 (173)
..|++++. .+ . ..+... .+ .+ ....++.++|||+ ++++... ......|+.+|.+++
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~-~~~~~-~~~~~~~~SpDg~~l~~~~~~--------------~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGA-IPAQH-HRYVGATVTEDDRFLLISAAN--------------STSGNRLYVKDLSQEN 270 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESC-SGGGC-CSEEEEEECTTSCEEEEEEES--------------SSSCCEEEEEETTSTT
T ss_pred CcEEEEEECCCCcccceEEEec-CCCCC-eEEEEEEEcCCCCEEEEEEcc--------------CCCCcEEEEEECCCCC
Confidence 23666553 22 2 223221 11 01 1235678999997 4454321 112247888887654
Q ss_pred -eeEEeeccccCcceEEEccCCCEEEEE
Q 030700 143 -QTSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 143 -~~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
....+......-... ++++|+.||+.
T Consensus 271 ~~~~~l~~~~~~~~~~-~~~~g~~l~~~ 297 (693)
T 3iuj_A 271 APLLTVQGDLDADVSL-VDNKGSTLYLL 297 (693)
T ss_dssp CCCEEEECSSSSCEEE-EEEETTEEEEE
T ss_pred CceEEEeCCCCceEEE-EeccCCEEEEE
Confidence 455554433222222 56666666654
No 286
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.45 E-value=0.0065 Score=44.83 Aligned_cols=147 Identities=15% Similarity=0.107 Sum_probs=70.6
Q ss_pred CcceEEEcC--CCCEE-EEcCCCeEEEEcCC-CcE---EEeccccCccccceEEccC--CcEEEEEeCCCe-EEEEccC-
Q 030700 11 HPEDVSVDG--NGVLY-TATGDGWIKRMHPN-GTW---EDWHQVGSQSLLGLTTTKE--NNVIIVCDSQQG-LLKVSEE- 79 (173)
Q Consensus 11 ~p~~l~~~~--~g~l~-~~~~~~~i~~~~~~-g~~---~~~~~~~~~p~~gl~~~~~--g~l~~v~~~~~~-i~~~~~~- 79 (173)
...+++|.+ ++.++ .+..++.|..|+.. +.. ..+........ .++|+++ +.+ +++...++ +...+..
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~-lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLI-LACGSSDGAISLLTYTG 136 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSC-EEEECSSSCEEEEEECS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcE-EEEEcCCCCEEEEecCC
Confidence 456788875 46544 45588999999853 432 22323344567 9999987 777 44444444 4433432
Q ss_pred C-cEEEEeccCCccccCCccEEEcCCCc---EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC---eeEEeec-cc
Q 030700 80 G-VTVLVSQFNGSQLRFANDVIEASDGS---LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN---QTSLVLD-GL 151 (173)
Q Consensus 80 g-~~~~~~~~~~~~~~~~~~l~~~~dG~---~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~---~~~~~~~-~~ 151 (173)
+ .........+. ....+.++++|++. +...... . .......++....++.|..+|..++ +...... ..
T Consensus 137 ~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 137 EGQWEVKKINNAH-TIGCNAVSWAPAVVPGSLIDHPSG--Q-KPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp SSCEEECCBTTSS-SSCBCCCEECCCCCC------CCS--C-CCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS
T ss_pred CCCcceeeeeccc-cCCcceEEEccccCCccccccccc--c-CccccceEEEecCCCeEEEEEeCCCCccceeeecccCC
Confidence 2 22222222211 12346677777631 1100000 0 0000011222334566666665433 1211122 23
Q ss_pred cCcceEEEccCC
Q 030700 152 YFANGVALSEDE 163 (173)
Q Consensus 152 ~~p~gi~~~~dg 163 (173)
...+.++|+|++
T Consensus 213 ~~V~~v~~sp~~ 224 (316)
T 3bg1_A 213 DWVRDVAWAPSI 224 (316)
T ss_dssp SCEEEEECCCCS
T ss_pred CceEEEEecCCC
Confidence 445789999986
No 287
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.40 E-value=0.0032 Score=51.93 Aligned_cols=139 Identities=12% Similarity=0.029 Sum_probs=78.9
Q ss_pred cceEEEcCCCC-EEEEcC-----CCeEEEEcCC-------C--cEEEeccccCccccceEEccCCcEEEEEeCC----Ce
Q 030700 12 PEDVSVDGNGV-LYTATG-----DGWIKRMHPN-------G--TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQ----QG 72 (173)
Q Consensus 12 p~~l~~~~~g~-l~~~~~-----~~~i~~~~~~-------g--~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~----~~ 72 (173)
..++.++|+|+ |+++.. +..|+.++.+ + ....+........ -.++++|+.+|+.... ..
T Consensus 235 ~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~~s~~~~~~~~ 312 (710)
T 2xdw_A 235 MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY--DYVTNEGTVFTFKTNRHSPNYR 312 (710)
T ss_dssp EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE--EEEEEETTEEEEEECTTCTTCE
T ss_pred EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE--EEEeccCCEEEEEECCCCCCCE
Confidence 34789999885 554431 4678888854 3 3444433322222 3467777765665432 24
Q ss_pred EEEEccC-C-c---EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe-eEE
Q 030700 73 LLKVSEE-G-V---TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ-TSL 146 (173)
Q Consensus 73 i~~~~~~-g-~---~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~ 146 (173)
|+.++.+ + . +.+....+. ....++++.+++.++++... ....+|+++++.+|+ .+.
T Consensus 313 l~~~d~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~lv~~~~~---------------~g~~~l~~~~~~~g~~~~~ 374 (710)
T 2xdw_A 313 LINIDFTDPEESKWKVLVPEHEK---DVLEWVACVRSNFLVLCYLH---------------DVKNTLQLHDLATGALLKI 374 (710)
T ss_dssp EEEEETTSCCGGGCEEEECCCSS---CEEEEEEEETTTEEEEEEEE---------------TTEEEEEEEETTTCCEEEE
T ss_pred EEEEeCCCCCcccceeccCCCCC---CeEEEEEEEcCCEEEEEEEE---------------CCEEEEEEEECCCCCEEEe
Confidence 7777753 3 2 444322111 23456777767777776422 122478999985554 344
Q ss_pred eeccccCcceEEEccCCCEEEEEe
Q 030700 147 VLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 147 ~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
+........+++++|+++.++++-
T Consensus 375 l~~~~~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 375 FPLEVGSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp ECCCSSEEEEEECCTTCSEEEEEE
T ss_pred cCCCCceEEEEecCCCCCEEEEEE
Confidence 433333445788889988777653
No 288
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.35 E-value=0.003 Score=48.58 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=67.7
Q ss_pred CCcceEEEcCC----C-CEEEEc-CCCeEEEEc----CCC----cEEEecccc--CccccceEEc-cCCcEEEEEeCC-C
Q 030700 10 NHPEDVSVDGN----G-VLYTAT-GDGWIKRMH----PNG----TWEDWHQVG--SQSLLGLTTT-KENNVIIVCDSQ-Q 71 (173)
Q Consensus 10 ~~p~~l~~~~~----g-~l~~~~-~~~~i~~~~----~~g----~~~~~~~~~--~~p~~gl~~~-~~g~l~~v~~~~-~ 71 (173)
.+..|++.+|+ + .||+.. ...+++++. .+. .++.+.+.+ .... ++++| .+|.+ |+++.. +
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~-~~~~D~~~G~l-y~~~~~~~ 297 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAI-ALAYDPKTKVI-FFAEANTK 297 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEE-EEEECTTTCEE-EEEESSSS
T ss_pred cCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcc-eEEEeCCCCeE-EEEeccCC
Confidence 47889999985 4 699988 555799885 122 223332332 2344 67786 78888 888866 5
Q ss_pred eEEEEccCC-------cEEEEeccCCccccCCccEEEcCCCcEEEEeCc
Q 030700 72 GLLKVSEEG-------VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSS 113 (173)
Q Consensus 72 ~i~~~~~~g-------~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~ 113 (173)
.|.++++++ .+.+... ..+.+|++|.++++|.+|+..+.
T Consensus 298 aI~~w~~~~~~~~~~n~~~l~~d---~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 298 QVSCWNTQKMPLRMKNTDVVYTS---SRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp EEEEEETTSCSBCGGGEEEEEEC---TTCCSEEEEEECTTSCEEEEECS
T ss_pred eEEEEeCCCCccccCceEEEEEC---CCccccCeEEECCCCeEEEEECc
Confidence 688887642 3444432 25679999999999999998754
No 289
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.31 E-value=0.025 Score=40.95 Aligned_cols=62 Identities=13% Similarity=0.081 Sum_probs=40.5
Q ss_pred ceEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEecc---ccCccccceEEccCCcEEEEEeCCCeEEEEc
Q 030700 13 EDVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQ---VGSQSLLGLTTTKENNVIIVCDSQQGLLKVS 77 (173)
Q Consensus 13 ~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~---~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~ 77 (173)
..|+|.+++ +.++..++.|+.||. +|+...... ...... .+++++++++ +++...++.+++.
T Consensus 29 ~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~-l~sgs~Dg~v~iw 94 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNY-LAVGTSSAEVQLW 94 (318)
T ss_dssp BCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSE-EEEEETTSEEEEE
T ss_pred eEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCE-EEEEECCCcEEEe
Confidence 468998876 554446788999995 566554322 233456 8999999999 4444444544444
No 290
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.28 E-value=0.013 Score=44.71 Aligned_cols=99 Identities=15% Similarity=0.190 Sum_probs=57.9
Q ss_pred CcceEEEcC--CCCEEEEcCCC----eEEEEcCCC-cEEEecccc--------------CccccceEEcc---CCcEEEE
Q 030700 11 HPEDVSVDG--NGVLYTATGDG----WIKRMHPNG-TWEDWHQVG--------------SQSLLGLTTTK---ENNVIIV 66 (173)
Q Consensus 11 ~p~~l~~~~--~g~l~~~~~~~----~i~~~~~~g-~~~~~~~~~--------------~~p~~gl~~~~---~g~l~~v 66 (173)
...+|++|| .+.||++...+ .|++.+-.| .+..+.... .... +|++++ .+++ |+
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l-~~ 133 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTW-YA 133 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCE-EE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEE-EE
Confidence 467899999 78999877555 788875444 355543211 1233 577875 4566 87
Q ss_pred EeCCCeEEEEccCC--cEEEEecc--C------------CccccCCccEEEcC--CCcEEEEe
Q 030700 67 CDSQQGLLKVSEEG--VTVLVSQF--N------------GSQLRFANDVIEAS--DGSLYFTV 111 (173)
Q Consensus 67 ~~~~~~i~~~~~~g--~~~~~~~~--~------------~~~~~~~~~l~~~~--dG~~~v~~ 111 (173)
.....++++-++.| .+.+.... . +........|.++| .+.+|++.
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~ 196 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGM 196 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEE
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEE
Confidence 66566788776666 33332110 0 00112345788887 35789874
No 291
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.18 E-value=0.006 Score=50.20 Aligned_cols=136 Identities=10% Similarity=-0.025 Sum_probs=75.7
Q ss_pred ceEEEcCCCC-EEEEcCC----CeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeC-C---CeEEEEccC-C-
Q 030700 13 EDVSVDGNGV-LYTATGD----GWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDS-Q---QGLLKVSEE-G- 80 (173)
Q Consensus 13 ~~l~~~~~g~-l~~~~~~----~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~-~---~~i~~~~~~-g- 80 (173)
.++.++|+|+ |+++... ..|+.++. ++.+..+........ ...+ ++|++ |+... . ..|+.++.+ +
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~~~~-~~g~l-~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY-EVHA-WKDRF-YVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE-EEEE-ETTEE-EEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE-EEEe-cCCcE-EEEECCCCCCCEEEEEeCCCCC
Confidence 4788999884 5554422 26888874 455555544443334 4444 56665 66543 2 357877753 3
Q ss_pred c---EEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcce
Q 030700 81 V---TVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANG 156 (173)
Q Consensus 81 ~---~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~g 156 (173)
. +.+....+. ....+++++ ++.++++... ....+|+.++.+++..+.+... .....+
T Consensus 307 ~~~~~~l~~~~~~---~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~~v~~ 367 (695)
T 2bkl_A 307 RASWKEIVPEDSS---ASLLSVSIV-GGHLSLEYLK---------------DATSEVRVATLKGKPVRTVQLPGVGAASN 367 (695)
T ss_dssp GGGCEEEECCCSS---CEEEEEEEE-TTEEEEEEEE---------------TTEEEEEEEETTCCEEEECCCSSSSEECC
T ss_pred ccCCeEEecCCCC---CeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCeeEEecCCCCeEEEE
Confidence 3 444322111 233556776 6677776322 1224788888764444443322 333456
Q ss_pred EEEccCCCEEEEEe
Q 030700 157 VALSEDERFLVVCE 170 (173)
Q Consensus 157 i~~~~dg~~lyv~~ 170 (173)
++++||++.++++-
T Consensus 368 ~~~s~d~~~l~~~~ 381 (695)
T 2bkl_A 368 LMGLEDLDDAYYVF 381 (695)
T ss_dssp CBSCTTCSEEEEEE
T ss_pred eecCCCCCEEEEEE
Confidence 77888888777653
No 292
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.0076 Score=48.24 Aligned_cols=136 Identities=9% Similarity=-0.022 Sum_probs=75.3
Q ss_pred CcceEEEcCC------CCEEEEc-CCCeEEEEcCC-CcE------------EEeccccCccccceEEccCCcEEEEEeCC
Q 030700 11 HPEDVSVDGN------GVLYTAT-GDGWIKRMHPN-GTW------------EDWHQVGSQSLLGLTTTKENNVIIVCDSQ 70 (173)
Q Consensus 11 ~p~~l~~~~~------g~l~~~~-~~~~i~~~~~~-g~~------------~~~~~~~~~p~~gl~~~~~g~l~~v~~~~ 70 (173)
....++|.|+ +.++++. .++.|..|+.. +.. ..+........ +++|++++ .|+.+...
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~-~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPT-TVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSS-EEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCC-eEEEEeCC
Confidence 3567899985 4566544 78888888853 221 01112223456 88998775 42555433
Q ss_pred CeEEEEcc-CC-c-EEEEeccCCccccCCccE--EEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 71 QGLLKVSE-EG-V-TVLVSQFNGSQLRFANDV--IEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 71 ~~i~~~~~-~g-~-~~~~~~~~~~~~~~~~~l--~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
..|...+. ++ . ........ .....+ ++.++| .++++.. .++.|..+|..+++.
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~----~~V~sv~~~~s~~g~~~laS~S-----------------~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHD----SYILSVSTAYSDFEDTVVSTVA-----------------VDGYFYIFNPKDIAT 345 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSS----SCEEEEEEECCTTSCCEEEEEE-----------------TTSEEEEECGGGHHH
T ss_pred CEEEEEECCCCCCceEEeeccc----ccEEEEEEEcCCCCCeEEEEec-----------------cCCeEEEEECCCCCc
Confidence 34444443 34 2 11111111 235666 456787 7777632 457888899865442
Q ss_pred EEee-ccc--cCcceEEEccCCCEEEEE
Q 030700 145 SLVL-DGL--YFANGVALSEDERFLVVC 169 (173)
Q Consensus 145 ~~~~-~~~--~~p~gi~~~~dg~~lyv~ 169 (173)
.... ... .....++|+|+++.+..+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~ 373 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYS 373 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEE
T ss_pred ccccccccccCcccceEeCCCcCeEEEe
Confidence 1111 111 234679999999876554
No 293
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.15 E-value=0.048 Score=41.89 Aligned_cols=133 Identities=13% Similarity=0.089 Sum_probs=68.8
Q ss_pred cceEEEcCCC-CEEEEcCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cEEEE
Q 030700 12 PEDVSVDGNG-VLYTATGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VTVLV 85 (173)
Q Consensus 12 p~~l~~~~~g-~l~~~~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~~~~ 85 (173)
..++++ ++ .++++..++.|..||. +++... +........ .+.+ ++++++.+.....+..++. ++ ...+.
T Consensus 282 v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 282 VYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp EEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEE-EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred eEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEE-EEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEc
Confidence 445555 44 4445557778888874 444332 222223334 4544 4456344443444555553 44 23322
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee------ccccCcceEEE
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL------DGLYFANGVAL 159 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~------~~~~~p~gi~~ 159 (173)
.. . ........++++ +.++++- ..++.|..+|..+++..... ........++|
T Consensus 357 ~~-~-~~~~~v~~~~~~--~~~l~s~-----------------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 415 (445)
T 2ovr_B 357 GP-N-KHQSAVTCLQFN--KNFVITS-----------------SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA 415 (445)
T ss_dssp ST-T-SCSSCEEEEEEC--SSEEEEE-----------------ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEE
T ss_pred cC-C-CCCCCEEEEEEC--CCEEEEE-----------------eCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEe
Confidence 11 0 011234455654 4554442 24578999998877654333 12344578999
Q ss_pred ccCCCEEEEEe
Q 030700 160 SEDERFLVVCE 170 (173)
Q Consensus 160 ~~dg~~lyv~~ 170 (173)
+|++..+.++.
T Consensus 416 s~~~~~la~~~ 426 (445)
T 2ovr_B 416 SNTKLVCAVGS 426 (445)
T ss_dssp CSSEEEEEEEC
T ss_pred cCCEEEEEEcc
Confidence 99987766653
No 294
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.14 E-value=0.02 Score=47.27 Aligned_cols=109 Identities=15% Similarity=0.258 Sum_probs=60.6
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEEEeccc-c------------CccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEE
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWEDWHQV-G------------SQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTV 83 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~~~~~~-~------------~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~ 83 (173)
+|.||++..++.|+.+|. +|+.. |.-. . .... ++++ .++++ |++.....++.+|. +| ...
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~-W~~~~~~~~~~~~~~~~~~~~~-~~a~-~~~~v-~v~~~dg~l~alD~~tG~~~W 152 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRI-WTYDPQIDRSTGFKGCCDVVNR-GVAL-WKGKV-YVGAWDGRLIALDAATGKEVW 152 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEE-EEECCCCCGGGGGGSSSCSCCC-CCEE-ETTEE-EEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEE-EEEcCCCCccccccccccCCCC-CceE-ECCEE-EEEcCCCEEEEEECCCCCEEe
Confidence 788999987789999995 56532 2111 0 1123 5666 34566 88866667999995 78 332
Q ss_pred EEecc-CCcc-ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeE
Q 030700 84 LVSQF-NGSQ-LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 84 ~~~~~-~~~~-~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 145 (173)
-.... +... ........+. +|.+|++.....+ ..++.|+.+|+++|+..
T Consensus 153 ~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~------------~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 153 HQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEY------------GVRGYITAYDAETGERK 203 (677)
T ss_dssp EEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCEE
T ss_pred eecCCcCcCcCcccccCcEEE-CCEEEEEeccccc------------CCCCEEEEEECCCCcEE
Confidence 22221 1000 0111122232 5678887432111 12478889998888653
No 295
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.11 E-value=0.028 Score=46.56 Aligned_cols=141 Identities=11% Similarity=0.010 Sum_probs=74.6
Q ss_pred cceEEEcCCCCEE-E-EcCCC----eEEEEcCC-CcEEEeccccCccccceEEccCCcEEEEEeCCC-------------
Q 030700 12 PEDVSVDGNGVLY-T-ATGDG----WIKRMHPN-GTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ------------- 71 (173)
Q Consensus 12 p~~l~~~~~g~l~-~-~~~~~----~i~~~~~~-g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~------------- 71 (173)
..+++|+|+|+.. + .+..| .|+.+|.+ |+............ ++++++| +.++++....
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 4568999998633 3 33222 58888864 45443211111235 7889999 7656654321
Q ss_pred -eEEEEcc-CC-c-EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC--e-
Q 030700 72 -GLLKVSE-EG-V-TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN--Q- 143 (173)
Q Consensus 72 -~i~~~~~-~g-~-~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~- 143 (173)
.+++++. .+ . ..+.-...+.+ ....++.++|||+ ++++.... ......|+.+|.+++ +
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~ 308 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELP-KRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGP 308 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCT-TCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECC
T ss_pred CEEEEEECCCCchhCEEEeccCCCC-eEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCcc
Confidence 2666664 33 2 22221111111 1245788999997 44442110 002347888888766 4
Q ss_pred eEEeeccccCcceEEEccCCCEEEEE
Q 030700 144 TSLVLDGLYFANGVALSEDERFLVVC 169 (173)
Q Consensus 144 ~~~~~~~~~~p~gi~~~~dg~~lyv~ 169 (173)
.+.+.......... ++|+|+.||+.
T Consensus 309 ~~~l~~~~~~~~~~-~~~dg~~l~~~ 333 (741)
T 1yr2_A 309 VTALIPDLKAQWDF-VDGVGDQLWFV 333 (741)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEE
T ss_pred cEEecCCCCceEEE-EeccCCEEEEE
Confidence 55555443332333 35788777765
No 296
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.08 E-value=0.063 Score=41.69 Aligned_cols=100 Identities=8% Similarity=-0.070 Sum_probs=60.3
Q ss_pred CCcceEEEcCC-CCEEEEc-CCCeEEEEcCC-CcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEE
Q 030700 10 NHPEDVSVDGN-GVLYTAT-GDGWIKRMHPN-GTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTV 83 (173)
Q Consensus 10 ~~p~~l~~~~~-g~l~~~~-~~~~i~~~~~~-g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~ 83 (173)
....+++|+|+ +.++++. .++.|..||.. +... .......... +++|+++|++|+++.....+..++..+ ...
T Consensus 150 ~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~-~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~ 228 (434)
T 2oit_A 150 GMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT-SVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKV 228 (434)
T ss_dssp GSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE-EEEECTTSSCEEEEETTSCEEEECTTCCEEEE
T ss_pred CceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee-EEEEcCCCCEEEEEcCCCcEEEEccCCccccc
Confidence 45778999996 7777644 88999999854 3322 2222344577 999999999856665555566666555 222
Q ss_pred EEeccCCc--cccCCccEEEcCCCcEEEE
Q 030700 84 LVSQFNGS--QLRFANDVIEASDGSLYFT 110 (173)
Q Consensus 84 ~~~~~~~~--~~~~~~~l~~~~dG~~~v~ 110 (173)
+....... .......+.+++++.++++
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEETTEEEEE
T ss_pred ccCCcccCCCCceeEEEEEEecCceEEEE
Confidence 22111100 0114567788887765543
No 297
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.07 E-value=0.029 Score=42.85 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=57.6
Q ss_pred ceEEEcC---CCCEEEEcCCCeEEEEcCCC-cEEEeccc---c----------------CccccceEEcc--CCcEEEEE
Q 030700 13 EDVSVDG---NGVLYTATGDGWIKRMHPNG-TWEDWHQV---G----------------SQSLLGLTTTK--ENNVIIVC 67 (173)
Q Consensus 13 ~~l~~~~---~g~l~~~~~~~~i~~~~~~g-~~~~~~~~---~----------------~~p~~gl~~~~--~g~l~~v~ 67 (173)
.+|+++| .+.||+....+.|++.+-.| .+..+... . .... .|++++ .+++ |++
T Consensus 118 ~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~-~i~~d~~~~~~l-~vg 195 (394)
T 3b7f_A 118 FWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMH-SILVDPRDPKHL-YIG 195 (394)
T ss_dssp EEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEE-EEEECTTCTTCE-EEE
T ss_pred eEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCcee-EEEECCCCCCEE-EEE
Confidence 3588886 57899877667899986444 45554221 0 1235 788886 3466 887
Q ss_pred eCCCeEEEEccCC--cEEEEeccCCc--c------ccCCccEEEcCC--CcEEEEe
Q 030700 68 DSQQGLLKVSEEG--VTVLVSQFNGS--Q------LRFANDVIEASD--GSLYFTV 111 (173)
Q Consensus 68 ~~~~~i~~~~~~g--~~~~~~~~~~~--~------~~~~~~l~~~~d--G~~~v~~ 111 (173)
....++++-.+.| .+.+....... + ......|+++++ +.+|++.
T Consensus 196 ~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 196 MSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp EETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred ECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 6555677766656 34332211110 0 023567889986 6788874
No 298
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.05 E-value=0.048 Score=39.37 Aligned_cols=107 Identities=7% Similarity=-0.045 Sum_probs=59.1
Q ss_pred cceEEEcCCCCEEEEc-CCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC---cEEEE
Q 030700 12 PEDVSVDGNGVLYTAT-GDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG---VTVLV 85 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~-~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g---~~~~~ 85 (173)
..++++.|+|.++++. .++.|..|+. +++......... .. -..++.+++++..+.....+...+. .+ ...+.
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~-~~-~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS-AR-VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-SC-EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCcc-ce-EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 5689999998766554 8889999985 454433222211 12 3344556667444443333333333 33 22221
Q ss_pred eccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 86 SQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 86 ~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
. .. .....+.+.++|+++++.. .++.|..+|..++
T Consensus 148 ~-~~----~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 148 G-HS----QEVCGLRWAPDGRHLASGG-----------------NDNLVNVWPSAPG 182 (318)
T ss_dssp C-CS----SCEEEEEECTTSSEEEEEE-----------------TTSCEEEEESSCB
T ss_pred C-cc----CceEEEEEcCCCCEEEEEe-----------------cCcceeEEECCCC
Confidence 1 11 3456678888888666532 3356777776654
No 299
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.92 E-value=0.034 Score=41.84 Aligned_cols=59 Identities=17% Similarity=0.261 Sum_probs=37.3
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEEEeccc----------cCccccceEEccCCcEEEEEeCCCeEEEEcc-CC
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWEDWHQV----------GSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~~~~~~----------~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g 80 (173)
++.+|++..++.|+++|. +|+..-.... .......++. .++++ |++.....++.++. +|
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v-~v~~~~g~l~a~d~~tG 123 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGGHV-YIGSEKAQVYALNTSDG 123 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETTEE-EEEETTSEEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCCEE-EEEcCCCEEEEEECCCC
Confidence 678999988889999996 5764311111 1111103333 45566 88876677999995 67
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.86 E-value=0.085 Score=39.27 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=59.3
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCCC-cEEEeccc-cCccccceEEccCCcEEEEEeCCCeEEEEccC-C--cEEEEe
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPNG-TWEDWHQV-GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEE-G--VTVLVS 86 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~g-~~~~~~~~-~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~-g--~~~~~~ 86 (173)
+..+++.+++.+|+....+.|++-.-.| .+...... ..... ++++++++++ |++.....+++-... | .+.+..
T Consensus 124 ~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~-~~~~~~~~~~-~~~g~~G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMR-NLNRSPSGEY-VAVSSRGSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp EEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEE-EEEECTTSCE-EEEETTSSEEEEECTTCSSCEEEEC
T ss_pred eEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceE-EEEEcCCCcE-EEEECCCcEEEEeCCCCCceeECCC
Confidence 4567776778888777667788764234 46655332 23456 8888899888 655545456665554 4 344322
Q ss_pred ccCCccccCCccEEEcCCCcEEEEe
Q 030700 87 QFNGSQLRFANDVIEASDGSLYFTV 111 (173)
Q Consensus 87 ~~~~~~~~~~~~l~~~~dG~~~v~~ 111 (173)
. . ......++++++|++|+..
T Consensus 202 ~-~---~~~~~~~~~~~~g~~~~~~ 222 (327)
T 2xbg_A 202 T-T---SRRLHNMGFTPDGRLWMIV 222 (327)
T ss_dssp C-S---SSCEEEEEECTTSCEEEEE
T ss_pred C-C---CCccceeEECCCCCEEEEe
Confidence 1 1 1355778888999988864
No 301
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.73 E-value=0.1 Score=43.06 Aligned_cols=15 Identities=0% Similarity=0.106 Sum_probs=12.9
Q ss_pred eEEEccCCCEEEEEe
Q 030700 156 GVALSEDERFLVVCE 170 (173)
Q Consensus 156 gi~~~~dg~~lyv~~ 170 (173)
+++++|+++.+|+..
T Consensus 397 ~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 397 PMSFNPQTGLVYLPA 411 (677)
T ss_dssp CCEEETTTTEEEEEE
T ss_pred CceEcCCCCEEEEeC
Confidence 689999999999863
No 302
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.65 E-value=0.049 Score=45.10 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=74.0
Q ss_pred cceEEEcCCCC-EEEEcC-----CCeEEEEcCC-C--c-EEEeccccCccccceEEccCCcEEEEEeCC----CeEEEEc
Q 030700 12 PEDVSVDGNGV-LYTATG-----DGWIKRMHPN-G--T-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQ----QGLLKVS 77 (173)
Q Consensus 12 p~~l~~~~~g~-l~~~~~-----~~~i~~~~~~-g--~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~----~~i~~~~ 77 (173)
-.++.++|+|+ |+++.. ...|+.++.+ + . +..+........ ... +++|+.||+.... ..|+.++
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~~-~~dg~~l~~~s~~~~~~~~l~~~d 347 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DFV-DGVGDQLWFVSGDGAPLKKIVRVD 347 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EEE-EEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EEE-eccCCEEEEEECCCCCCCEEEEEe
Confidence 35788999985 554442 3478888853 3 3 444433333333 333 4666655665432 2477777
Q ss_pred cCC----cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeec-ccc
Q 030700 78 EEG----VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLD-GLY 152 (173)
Q Consensus 78 ~~g----~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~ 152 (173)
.++ .+.+..... ....++.++ ++.++++... ....+|+.++.+++..+.+.. ...
T Consensus 348 ~~~~~~~~~~l~~~~~----~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~ 407 (741)
T 1yr2_A 348 LSGSTPRFDTVVPESK----DNLESVGIA-GNRLFASYIH---------------DAKSQVLAFDLDGKPAGAVSLPGIG 407 (741)
T ss_dssp CSSSSCEEEEEECCCS----SEEEEEEEE-BTEEEEEEEE---------------TTEEEEEEEETTSCEEEECBCSSSC
T ss_pred CCCCccccEEEecCCC----CeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCceeeccCCCCe
Confidence 532 233332111 123455665 5567666322 122478888876554444432 233
Q ss_pred CcceEEEccCCCEEEEE
Q 030700 153 FANGVALSEDERFLVVC 169 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv~ 169 (173)
...+++++||++.|+++
T Consensus 408 ~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 408 SASGLSGRPGDRHAYLS 424 (741)
T ss_dssp EEEEEECCBTCSCEEEE
T ss_pred EEEEeecCCCCCEEEEE
Confidence 45678889998867654
No 303
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.64 E-value=0.07 Score=43.12 Aligned_cols=108 Identities=12% Similarity=0.174 Sum_probs=60.3
Q ss_pred CCCEEEEcC-CCeEEEEcC--CCcEE--Eecccc----------CccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cE
Q 030700 20 NGVLYTATG-DGWIKRMHP--NGTWE--DWHQVG----------SQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VT 82 (173)
Q Consensus 20 ~g~l~~~~~-~~~i~~~~~--~g~~~--~~~~~~----------~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~ 82 (173)
++.+|++.. ++.|+.+|. +|+.. .-.... .... +++++ ++++ |+......++.+|. +| ..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v-~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDR-GLAYG-AGQI-VKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-TTEE-EEECTTSEEEEEETTTCCEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCcccccccccccccc-ccEEE-CCEE-EEEeCCCEEEEEECCCCCEE
Confidence 788999987 789999997 66532 111110 0123 45653 5566 88766667999995 78 33
Q ss_pred EEEeccCCcc--ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 83 VLVSQFNGSQ--LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 83 ~~~~~~~~~~--~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
.-... .+.+ ........+. +|.+|++.....+ ..++.|+.+|+++|+.
T Consensus 139 W~~~~-~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~ 188 (571)
T 2ad6_A 139 WEVEV-CDPKVGSTLTQAPFVA-KDTVLMGCSGAEL------------GVRGAVNAFDLKTGEL 188 (571)
T ss_dssp EEEEC-CCGGGTCBCCSCCEEE-TTEEEEECBCGGG------------TCCCEEEEEETTTCCE
T ss_pred EEecC-CCCCccceeccCCEEE-CCEEEEEecCCcc------------CCCCEEEEEECCCCcE
Confidence 22221 1110 0011112222 5788887532100 1246889999888765
No 304
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.62 E-value=0.018 Score=48.05 Aligned_cols=112 Identities=10% Similarity=0.016 Sum_probs=60.1
Q ss_pred cceEEEc-CCCC-EE-EEcCCC----eEEEEcCCCc-EEEeccccCccccceEEccCCcEEEEEeCC-----CeEEEEcc
Q 030700 12 PEDVSVD-GNGV-LY-TATGDG----WIKRMHPNGT-WEDWHQVGSQSLLGLTTTKENNVIIVCDSQ-----QGLLKVSE 78 (173)
Q Consensus 12 p~~l~~~-~~g~-l~-~~~~~~----~i~~~~~~g~-~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-----~~i~~~~~ 78 (173)
..+++++ |+|+ |. ..+..| .|+.++.++. ............ ++++++||+.|+++... ..|++++.
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~-~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNG-EIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECS-CCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCcee-eEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 4568899 9986 33 344333 4888886543 211001111245 78999998654544322 24777764
Q ss_pred C-C--c-EEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 79 E-G--V-TVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 79 ~-g--~-~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
. + . ..+... ... ....++.++|||+ |+++... .....|+.+|.+++
T Consensus 255 gt~~~~~~lv~~~-~~~--~~~~~~~~SpDg~~l~~~~~~---------------~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 255 GKLQSEDVCLYEE-HNP--LFSAFMYKAADTNTLCIGSQS---------------PETAEVHLLDLRKG 305 (751)
T ss_dssp TSCGGGCEEEEEC-CCT--TCEEEEEECTTSSEEEEEEEC---------------SSCEEEEEEESSSC
T ss_pred CCCchhcEEEEec-CCC--ceEEEEEECCCCCEEEEEecC---------------CCCceEEEEECCCC
Confidence 3 3 2 222221 111 1234678999997 5554321 12357888888764
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.60 E-value=0.14 Score=38.15 Aligned_cols=91 Identities=10% Similarity=0.136 Sum_probs=54.1
Q ss_pred cceEEEcCCCCEEEEcCCCeEEEEcCC-C-cEEEeccc---cCccccceEEccCCcEEEEEeCCCeEEEEccCC--cEEE
Q 030700 12 PEDVSVDGNGVLYTATGDGWIKRMHPN-G-TWEDWHQV---GSQSLLGLTTTKENNVIIVCDSQQGLLKVSEEG--VTVL 84 (173)
Q Consensus 12 p~~l~~~~~g~l~~~~~~~~i~~~~~~-g-~~~~~~~~---~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~~g--~~~~ 84 (173)
..++++++ +.+|+....+.|++- .| | .+...... .+.+. .|++..++++ |++.....+++-.+.| .+.+
T Consensus 82 ~~~i~~~~-~~~~~~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~-~~~~~~g~v~~S~DgG~tW~~~ 157 (327)
T 2xbg_A 82 FNSVSFQG-NEGWIVGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPR-LIKALGNGSA-EMITNVGAIYRTKDSGKNWQAL 157 (327)
T ss_dssp EEEEEEET-TEEEEEEETTEEEEE-SSTTSSCEECCCCTTCSSCEE-EEEEEETTEE-EEEETTCCEEEESSTTSSEEEE
T ss_pred EEEEEecC-CeEEEEECCCeEEEE-CCCCCCceECccccCCCCCeE-EEEEECCCCE-EEEeCCccEEEEcCCCCCCEEe
Confidence 35677875 678876656778775 34 3 35554321 23466 7887777777 6665444566554545 3333
Q ss_pred EeccCCccccCCccEEEcCCCcEEEE
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFT 110 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~ 110 (173)
..... .....++++++|.+|+.
T Consensus 158 ~~~~~----~~~~~~~~~~~~~~~~~ 179 (327)
T 2xbg_A 158 VQEAI----GVMRNLNRSPSGEYVAV 179 (327)
T ss_dssp ECSCC----CCEEEEEECTTSCEEEE
T ss_pred ecCCC----cceEEEEEcCCCcEEEE
Confidence 32211 24567888888887765
No 306
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.50 E-value=0.087 Score=43.36 Aligned_cols=134 Identities=10% Similarity=0.128 Sum_probs=72.1
Q ss_pred ceEEEcCCC-CEEEEcCC-------------CeEEEEcCC-Cc--EEEecccc----CccccceEEccCCcEEEEEeC-C
Q 030700 13 EDVSVDGNG-VLYTATGD-------------GWIKRMHPN-GT--WEDWHQVG----SQSLLGLTTTKENNVIIVCDS-Q 70 (173)
Q Consensus 13 ~~l~~~~~g-~l~~~~~~-------------~~i~~~~~~-g~--~~~~~~~~----~~p~~gl~~~~~g~l~~v~~~-~ 70 (173)
.+++|. || .||++..+ ..|++++.. +. ...+.... ..-. ++.+++||+.++++.. .
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYV-GATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEE-EEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEE-EEEEcCCCCEEEEEEccC
Confidence 457888 77 46655422 348887642 21 12222222 2235 7889999998665542 1
Q ss_pred ---CeEEEEcc-C--C-cEEEEeccCCccccCCccEEEcCCC-cEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCC
Q 030700 71 ---QGLLKVSE-E--G-VTVLVSQFNGSQLRFANDVIEASDG-SLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTN 142 (173)
Q Consensus 71 ---~~i~~~~~-~--g-~~~~~~~~~~~~~~~~~~l~~~~dG-~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~ 142 (173)
+.++.++. + + ...+...... ..-.++++| .+|+.... ..+..+|+.++.+++
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~------~~~~~~~~g~~l~~~t~~--------------~~~~~~l~~~d~~~~ 315 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDA------DVSLVDNKGSTLYLLTNR--------------DAPNRRLVTVDAANP 315 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSS------CEEEEEEETTEEEEEECT--------------TCTTCEEEEEETTSC
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCc------eEEEEeccCCEEEEEECC--------------CCCCCEEEEEeCCCC
Confidence 35777773 2 2 4444332211 111255655 57776432 113468999998865
Q ss_pred ee---EEeeccccCcceEEEccCCCEEEEEe
Q 030700 143 QT---SLVLDGLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 143 ~~---~~~~~~~~~p~gi~~~~dg~~lyv~~ 170 (173)
.. +.+....... +.|+++++.|+++.
T Consensus 316 ~~~~~~~l~~~~~~~--~~~s~~g~~lv~~~ 344 (693)
T 3iuj_A 316 GPAHWRDLIPERQQV--LTVHSGSGYLFAEY 344 (693)
T ss_dssp CGGGCEEEECCCSSC--EEEEEETTEEEEEE
T ss_pred CccccEEEecCCCCE--EEEEEECCEEEEEE
Confidence 43 4444332222 27888888887654
No 307
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.39 E-value=0.15 Score=42.17 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=59.4
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEE--Eecccc----------CccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEE
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWE--DWHQVG----------SQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVL 84 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~--~~~~~~----------~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~ 84 (173)
++.||++..++.|+.+|. +|+.. .-.... .... ++++ .++++ |+......++.+|. +| ...-
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~-~~g~v-~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNR-GVAV-WKGKV-YVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEE-ETTEE-EEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCC-ccEE-ECCEE-EEEccCCEEEEEECCCCCEeee
Confidence 778999887788999995 66532 111100 0123 4555 35566 88766667888995 78 3322
Q ss_pred Eecc-CCcc-ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 85 VSQF-NGSQ-LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 85 ~~~~-~~~~-~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
.... +... ........+. +|.+|+......+ ..++.|+.+|+++|+.
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~------------~~~g~v~a~D~~tG~~ 195 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEF------------GVRGYVTAYDAETGKE 195 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCE
T ss_pred ecCcCCCCCCccccCCcEEE-CCEEEEEeCCCcc------------CCCCEEEEEECCCCcE
Confidence 2221 1100 0111111222 6778886432111 1346888888888865
No 308
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.31 E-value=0.15 Score=42.02 Aligned_cols=109 Identities=15% Similarity=0.194 Sum_probs=59.7
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEE--Eecccc----------CccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEE
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWE--DWHQVG----------SQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVL 84 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~--~~~~~~----------~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~ 84 (173)
+|.||++..++.|+.+|. +|+.. .-.... .... +++++ ++++ |+......++.+|. +| ...-
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v-~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNR-GVALW-GDKV-YVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-BTEE-EEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCcc-ceEEE-CCEE-EEEcCCCEEEEEECCCCCEeee
Confidence 788999888889999995 67532 111100 0123 55663 4566 88766667899995 78 3322
Q ss_pred EeccCCc-cccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 85 VSQFNGS-QLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 85 ~~~~~~~-~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
....... .........+. +|.+|+......+ ..++.|+.+|+++|+.
T Consensus 143 ~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~------------~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEY------------GVRGFVSAYDADTGKL 190 (668)
T ss_dssp EECSCTTSSCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCE
T ss_pred eccCCCCCcceecCCCEEE-CCEEEEeCCCCCc------------CCCCEEEEEECCCCcE
Confidence 2221110 00111112222 5678886432111 1246888888888765
No 309
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.29 E-value=0.33 Score=39.14 Aligned_cols=16 Identities=13% Similarity=-0.020 Sum_probs=13.2
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
.+++++|+.+.+|+..
T Consensus 389 ~~~a~dp~~g~~yv~~ 404 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGL 404 (571)
T ss_dssp CBCEEETTTTEEEEEE
T ss_pred CCceECCCCCEEEEEc
Confidence 3589999999999964
No 310
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.11 E-value=0.0032 Score=47.96 Aligned_cols=128 Identities=20% Similarity=0.186 Sum_probs=46.4
Q ss_pred eEEEcCCCCEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEe-CCCeEEEEcc-CC-c-EEEEecc
Q 030700 14 DVSVDGNGVLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCD-SQQGLLKVSE-EG-V-TVLVSQF 88 (173)
Q Consensus 14 ~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~-~~~~i~~~~~-~g-~-~~~~~~~ 88 (173)
++++ .++.+|++..++.|+.+|. +|+..-.... +... ...+..++++ |++. ....++.++. +| . ..+....
T Consensus 4 sP~v-~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~-~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 4 TVTL-PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPA-FLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp -----CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CC-EEECTTTCCEEEC-----CCSEECSCCH
T ss_pred CCee-eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCE-EEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 3444 3678999988899999994 6764321122 2222 3333456667 6653 3345777775 66 2 2221110
Q ss_pred CCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCcceEEEccCCCEEEE
Q 030700 89 NGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFANGVALSEDERFLVV 168 (173)
Q Consensus 89 ~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p~gi~~~~dg~~lyv 168 (173)
.......| ++..++.+|++. .++.|+.+|+++|+..-... .+....++|+++.+|+
T Consensus 80 ~~~~~~sp---~~~~~~~v~~g~------------------~dg~v~a~D~~tG~~~w~~~---~~~~~~~~p~~~~v~~ 135 (369)
T 2hz6_A 80 PELVQASP---CRSSDGILYMGK------------------KQDIWYVIDLLTGEKQQTLS---SAFADSLSPSTSLLYL 135 (369)
T ss_dssp HHHHTTCS---CC-----CCCCE------------------EEEEEEEECCC-------------------------EEE
T ss_pred ccccccCc---eEecCCEEEEEe------------------CCCEEEEEECCCCcEEEEec---CCCcccccccCCEEEE
Confidence 00000111 112345566542 23678888888776532111 1122344556666776
Q ss_pred E
Q 030700 169 C 169 (173)
Q Consensus 169 ~ 169 (173)
+
T Consensus 136 ~ 136 (369)
T 2hz6_A 136 G 136 (369)
T ss_dssp E
T ss_pred E
Confidence 5
No 311
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.97 E-value=0.23 Score=40.43 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=60.2
Q ss_pred CCCEEEEcC-CCeEEEEcC--CCcEE--Eecccc----------CccccceEEc-cCCc----EEEEEeCCCeEEEEcc-
Q 030700 20 NGVLYTATG-DGWIKRMHP--NGTWE--DWHQVG----------SQSLLGLTTT-KENN----VIIVCDSQQGLLKVSE- 78 (173)
Q Consensus 20 ~g~l~~~~~-~~~i~~~~~--~g~~~--~~~~~~----------~~p~~gl~~~-~~g~----l~~v~~~~~~i~~~~~- 78 (173)
++.||++.. ++.|+.+|. +|+.. .-.... .... ++++. .+++ + |+......++.+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~-g~av~p~~g~~~~rV-~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNR-GLAYWPGDGKTPALI-LKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCC-CCEEECCCSSSCCEE-EEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccccc-ceEEEecCCcceeEE-EEEcCCCEEEEEECC
Confidence 778999987 789999997 66532 211110 1124 67774 2445 6 88766667999995
Q ss_pred CCcEEEEeccCCc-c-ccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 79 EGVTVLVSQFNGS-Q-LRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 79 ~g~~~~~~~~~~~-~-~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
+|........... . ........+. +|.+|+......+ ..++.|+.+|+++|+.
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGG------------TCCCEEEEEETTTCCE
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-CCEEEEEeccccc------------CCCCeEEEEECCCCcE
Confidence 7822222211110 0 0011111222 5778886421101 1246888888887765
No 312
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=95.88 E-value=0.044 Score=44.55 Aligned_cols=60 Identities=22% Similarity=0.472 Sum_probs=44.6
Q ss_pred CccCCcceEEEcCCCCEEEEc-CC------------CeEEEEcC-CCcEEEecc--ccCccccceEEccCCcEEEEE
Q 030700 7 GIVNHPEDVSVDGNGVLYTAT-GD------------GWIKRMHP-NGTWEDWHQ--VGSQSLLGLTTTKENNVIIVC 67 (173)
Q Consensus 7 ~~~~~p~~l~~~~~g~l~~~~-~~------------~~i~~~~~-~g~~~~~~~--~~~~p~~gl~~~~~g~l~~v~ 67 (173)
+.+..|..|++++.|+||++. .+ ..++..++ .|++.++.. ...... |++|++|++.||+.
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~T-G~~fspDg~tlfvn 548 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVT-GISFSPDQKTLFVG 548 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEE-EEEECTTSSEEEEE
T ss_pred CCccCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCc-CeeECCCCCEEEEE
Confidence 357899999999999999765 21 34677775 477766543 234577 99999999987776
No 313
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.47 E-value=0.19 Score=40.71 Aligned_cols=67 Identities=12% Similarity=0.109 Sum_probs=43.4
Q ss_pred EEEeccccCccccceEEccCCcEEEEEeCCC-eEEEEccC-----------C--cEEEEeccCCccccCCccEEEcCCCc
Q 030700 41 WEDWHQVGSQSLLGLTTTKENNVIIVCDSQQ-GLLKVSEE-----------G--VTVLVSQFNGSQLRFANDVIEASDGS 106 (173)
Q Consensus 41 ~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~-~i~~~~~~-----------g--~~~~~~~~~~~~~~~~~~l~~~~dG~ 106 (173)
...+.+.+..|+ |+-++|||+.++++.... .+-.++-+ . ...+....-| ..|-..++|++|+
T Consensus 315 ~~~~iP~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G---lGPlHt~Fd~~G~ 390 (638)
T 3sbq_A 315 FTRYVPVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG---LGPLHTTFDGRGN 390 (638)
T ss_dssp SEEEEEESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC---SCEEEEEECSSSE
T ss_pred eEEEEeCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC---CcccEEEECCCCc
Confidence 334456677899 999999999966665543 34434311 1 1112222222 5789999999999
Q ss_pred EEEEe
Q 030700 107 LYFTV 111 (173)
Q Consensus 107 ~~v~~ 111 (173)
.|.+-
T Consensus 391 aYTtl 395 (638)
T 3sbq_A 391 AYTTL 395 (638)
T ss_dssp EEEEE
T ss_pred eEeee
Confidence 99985
No 314
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.30 E-value=0.52 Score=36.22 Aligned_cols=122 Identities=9% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCcceEEEcCCCCEEEEcCCCeEEEEcCC-Cc---------EE--EeccccCccccceEEccCCcEEEEEeCCCeEEEEc
Q 030700 10 NHPEDVSVDGNGVLYTATGDGWIKRMHPN-GT---------WE--DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVS 77 (173)
Q Consensus 10 ~~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~---------~~--~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~ 77 (173)
....-|++.+...++++....++..++.+ .+ .. ...+... +. .++| ++++|+++ ...++..++
T Consensus 38 ~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE--ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE--CCCEEEEE-cCCcEEEEE
Confidence 45677999997777766633455556521 11 11 1123344 88 9999 77887888 444666666
Q ss_pred cCC---cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCc
Q 030700 78 EEG---VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFA 154 (173)
Q Consensus 78 ~~g---~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p 154 (173)
... ..... .+. . ..+++..-+. ++.+.. .+|.|+.+|.+++...... ...
T Consensus 113 v~sl~~~~~~~-~~~-~---~v~~i~~~~p-~~av~~------------------~dG~L~v~dl~~~~~~~~~---~~V 165 (388)
T 1xip_A 113 LEELSEFRTVT-SFE-K---PVFQLKNVNN-TLVILN------------------SVNDLSALDLRTKSTKQLA---QNV 165 (388)
T ss_dssp SSSTTCEEEEE-ECS-S---CEEEEEECSS-EEEEEE------------------TTSEEEEEETTTCCEEEEE---ESE
T ss_pred chhhhccCccc-eee-c---ceeeEEecCC-CEEEEE------------------CCCCEEEEEccCCcccccc---CCc
Confidence 432 11111 111 1 1223332222 233332 3478888887766544332 345
Q ss_pred ceEEEccCC
Q 030700 155 NGVALSEDE 163 (173)
Q Consensus 155 ~gi~~~~dg 163 (173)
..++|||+|
T Consensus 166 s~v~WSpkG 174 (388)
T 1xip_A 166 TSFDVTNSQ 174 (388)
T ss_dssp EEEEECSSE
T ss_pred eEEEEcCCc
Confidence 678888887
No 315
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.13 E-value=1.1 Score=36.52 Aligned_cols=16 Identities=0% Similarity=-0.008 Sum_probs=13.2
Q ss_pred ceEEEccCCCEEEEEe
Q 030700 155 NGVALSEDERFLVVCE 170 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~ 170 (173)
.+++++|+.+.+|+..
T Consensus 396 ~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 396 GHDSYDPKRELFFMGI 411 (599)
T ss_dssp CBCEEETTTTEEEEEE
T ss_pred CCccCCCCCCEEEEec
Confidence 4689999999999853
No 316
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.04 E-value=0.84 Score=34.81 Aligned_cols=129 Identities=13% Similarity=0.074 Sum_probs=67.6
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcCC-CcE----EEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC--cE
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHPN-GTW----EDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG--VT 82 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~~-g~~----~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g--~~ 82 (173)
...+++++ ++.++.+..++.|..|+.. +.. ........... .+++ ++++++++.....+..++. ++ ..
T Consensus 215 ~v~~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~ 290 (435)
T 1p22_A 215 AVLHLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN-VVDF--DDKYIVSASGDRTIKVWNTSTCEFVR 290 (435)
T ss_dssp CEEEEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTTCCEEE
T ss_pred cEEEEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEE-EEEe--CCCEEEEEeCCCeEEEEECCcCcEEE
Confidence 34556654 3355555678888888853 322 12222233445 6666 5567455554444555553 44 33
Q ss_pred EEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeecc-ccCcceEEEcc
Q 030700 83 VLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDG-LYFANGVALSE 161 (173)
Q Consensus 83 ~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~p~gi~~~~ 161 (173)
.+.. .. .....+.+ ++.++++- ..++.|..+|..+++......+ ......+++
T Consensus 291 ~~~~-~~----~~v~~~~~--~~~~l~~g-----------------~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-- 344 (435)
T 1p22_A 291 TLNG-HK----RGIACLQY--RDRLVVSG-----------------SSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 344 (435)
T ss_dssp EEEC-CS----SCEEEEEE--ETTEEEEE-----------------ETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--
T ss_pred EEcC-CC----CcEEEEEe--CCCEEEEE-----------------eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--
Confidence 3321 11 23344555 35555542 2347888899887765444433 334456666
Q ss_pred CCCEEEEE
Q 030700 162 DERFLVVC 169 (173)
Q Consensus 162 dg~~lyv~ 169 (173)
+++.|+++
T Consensus 345 ~~~~l~sg 352 (435)
T 1p22_A 345 DNKRIVSG 352 (435)
T ss_dssp CSSEEEEE
T ss_pred cCCEEEEE
Confidence 56666554
No 317
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.88 E-value=1.3 Score=36.32 Aligned_cols=14 Identities=0% Similarity=0.173 Sum_probs=12.1
Q ss_pred eEEEccCCCEEEEE
Q 030700 156 GVALSEDERFLVVC 169 (173)
Q Consensus 156 gi~~~~dg~~lyv~ 169 (173)
+++++|+.+.+||.
T Consensus 385 ~~a~dp~~g~~yv~ 398 (668)
T 1kv9_A 385 SMSFNPGTGLVYIP 398 (668)
T ss_dssp CCEEETTTTEEEEE
T ss_pred cceECCCCCEEEEe
Confidence 48999999999984
No 318
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.52 E-value=0.5 Score=35.75 Aligned_cols=99 Identities=10% Similarity=0.017 Sum_probs=53.3
Q ss_pred CCEEEEc-CCCeEEEEcCC-CcEEE---ec---cccCccccceEEcc--------CCcEEEEEeCCCeEEEEc-c-CC--
Q 030700 21 GVLYTAT-GDGWIKRMHPN-GTWED---WH---QVGSQSLLGLTTTK--------ENNVIIVCDSQQGLLKVS-E-EG-- 80 (173)
Q Consensus 21 g~l~~~~-~~~~i~~~~~~-g~~~~---~~---~~~~~p~~gl~~~~--------~g~l~~v~~~~~~i~~~~-~-~g-- 80 (173)
+.+.++. .++.|..|+.+ +.... +. .+.+..+ .++|+| |+++ +++...++.++++ . ++
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~-las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQV-IASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEE-EEEEETTSEEEEEEEETTEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCE-EEEEECCCeEEEEECCCCce
Confidence 3334433 67778777753 33221 11 1234456 899986 7788 5554455555554 2 44
Q ss_pred cEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCe
Q 030700 81 VTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQ 143 (173)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 143 (173)
...+... . .....++++|++. ++++- ..++.|..+|..+++
T Consensus 179 ~~~~~~~-~----~~v~~v~~~p~~~~~l~~~-----------------~~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 179 ILAGYPL-S----SPGISVQFRPSNPNQLIVG-----------------ERNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEC-S----SCEEEEEEETTEEEEEEEE-----------------ETTSEEEEEETTCCC
T ss_pred eeeecCC-C----CCcEEEEECCCCCceEEec-----------------CCCCEEEEEECCCCc
Confidence 2222221 1 2456799999874 44442 134677777766543
No 319
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.50 E-value=1.3 Score=35.77 Aligned_cols=58 Identities=14% Similarity=0.262 Sum_probs=37.0
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEE--EeccccC--------ccccceEEccCCcEEEEEeCCCeEEEEcc-CC
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWE--DWHQVGS--------QSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~--~~~~~~~--------~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g 80 (173)
+|.+|++...+.|+.+|. +|+.. .-..... ... ++++ .++++ |+......++.+|. +|
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~-g~a~-~~~~v-~~~t~dg~l~AlD~~TG 137 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR-GAAI-YGDKV-FFGTLDASVVALNKNTG 137 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCC-CCEE-ETTEE-EEEETTTEEEEEESSSC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCC-ccEE-ECCEE-EEEeCCCEEEEEECCCC
Confidence 789999886556999996 67632 2111110 124 5666 45566 88766677999995 78
No 320
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.35 E-value=0.18 Score=42.08 Aligned_cols=102 Identities=8% Similarity=0.120 Sum_probs=57.0
Q ss_pred cccceEEc-cCCcEEEE-EeCC-C---eEEEEccC-CcEEEEeccCCccccCCccEEEcCCCc-EEEEeCcCCcCcccce
Q 030700 51 SLLGLTTT-KENNVIIV-CDSQ-Q---GLLKVSEE-GVTVLVSQFNGSQLRFANDVIEASDGS-LYFTVSSTKFTPAEYY 122 (173)
Q Consensus 51 p~~gl~~~-~~g~l~~v-~~~~-~---~i~~~~~~-g~~~~~~~~~~~~~~~~~~l~~~~dG~-~~v~~~~~~~~~~~~~ 122 (173)
.. +.+++ |||+++.+ .+.. . .|+.++.+ |.+.+..... ....+++++|||+ |+++....
T Consensus 176 ~~-~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~-------- 242 (751)
T 2xe4_A 176 VM-EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDE-------- 242 (751)
T ss_dssp EE-EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECT--------
T ss_pred Ee-eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECC--------
Confidence 45 78899 99985444 4432 1 37777743 3121111111 1235789999995 66653210
Q ss_pred eeecccCCCceEEEEcCCCCee--EEeec--cccCcceEEEccCCCEEEEEe
Q 030700 123 LDLVSGEPHGVLLKYDPSTNQT--SLVLD--GLYFANGVALSEDERFLVVCE 170 (173)
Q Consensus 123 ~~~~~~~~~~~v~~~d~~~~~~--~~~~~--~~~~p~gi~~~~dg~~lyv~~ 170 (173)
......|++++..++.. ..+.. ....-.++.|||||++|+++.
T Consensus 243 -----~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 243 -----TLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp -----TCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred -----CCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 00114789999876542 23322 112334688999999888764
No 321
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.09 E-value=1.5 Score=33.44 Aligned_cols=62 Identities=16% Similarity=0.070 Sum_probs=35.2
Q ss_pred EEcCCCCEE-EEcCCCeEEEEcC-CCcEEE-eccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC
Q 030700 16 SVDGNGVLY-TATGDGWIKRMHP-NGTWED-WHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 16 ~~~~~g~l~-~~~~~~~i~~~~~-~g~~~~-~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g 80 (173)
++..++..+ ++..++.|..|+. +++... +........ .+++ ++++++.+.....+...+. ++
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~ 203 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTG 203 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCC
Confidence 444566555 4558899999985 455443 323334455 6666 6677455544444555553 45
No 322
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=93.97 E-value=1.6 Score=33.50 Aligned_cols=128 Identities=9% Similarity=0.096 Sum_probs=71.9
Q ss_pred cCCcceEEEcCCCCEEEEcCCCeEEEEcCCC--cEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEE
Q 030700 9 VNHPEDVSVDGNGVLYTATGDGWIKRMHPNG--TWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVL 84 (173)
Q Consensus 9 ~~~p~~l~~~~~g~l~~~~~~~~i~~~~~~g--~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~ 84 (173)
++.+..|++ .+..|+++ .++.|+.|+... ............. .+.+.+. ++ .++.....++.++- ++ ...+
T Consensus 87 lp~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~-av~~~dG~L~v~dl~~~~~~~~ 161 (388)
T 1xip_A 87 IPDVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TL-VILNSVNDLSALDLRTKSTKQL 161 (388)
T ss_dssp CTTEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EE-EEEETTSEEEEEETTTCCEEEE
T ss_pred CCCeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CE-EEEECCCCEEEEEccCCccccc
Confidence 445888999 33467777 668899998432 1111111111233 4444433 35 55555555666664 44 4332
Q ss_pred EeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee--EEee-------c---ccc
Q 030700 85 VSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT--SLVL-------D---GLY 152 (173)
Q Consensus 85 ~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~--~~~~-------~---~~~ 152 (173)
. .....++++|+| +.++. .+|.+..|++++++. .... . +-.
T Consensus 162 ~--------~~Vs~v~WSpkG-~~vg~------------------~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~ 214 (388)
T 1xip_A 162 A--------QNVTSFDVTNSQ-LAVLL------------------KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEY 214 (388)
T ss_dssp E--------ESEEEEEECSSE-EEEEE------------------TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTS
T ss_pred c--------CCceEEEEcCCc-eEEEE------------------cCCcEEEEcCCCccccccceecCCcccccccCCCe
Confidence 2 256789999999 55543 336777778876664 2222 1 123
Q ss_pred CcceEEEccCCCEEEE
Q 030700 153 FANGVALSEDERFLVV 168 (173)
Q Consensus 153 ~p~gi~~~~dg~~lyv 168 (173)
.+..|+|.++++++.+
T Consensus 215 ~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 215 SPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEESSSSEEEEE
T ss_pred eEEEEEEecCCeEEEE
Confidence 4567888888776543
No 323
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=93.03 E-value=0.91 Score=37.48 Aligned_cols=79 Identities=16% Similarity=0.205 Sum_probs=41.5
Q ss_pred CeEEEEcC-CCcEEEec-cccCccccceEEccCCcEEEEEeCCCeEEEEcc-CCcEEEEeccCCccccCCccEEEcCCCc
Q 030700 30 GWIKRMHP-NGTWEDWH-QVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EGVTVLVSQFNGSQLRFANDVIEASDGS 106 (173)
Q Consensus 30 ~~i~~~~~-~g~~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~~l~~~~dG~ 106 (173)
+.|..+|+ +|+. .|. ....... +-.+...+.++|++.....+..+|. +|.....-..... ....-+.+..+|+
T Consensus 455 g~l~A~D~~tG~~-~W~~~~~~~~~-~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~--~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 455 GKLIAWDPVKQQA-AWEVPYVTIFN-GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG--VMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEETTTTEE-EEEEEESSSCC-CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCCEEEEETTE
T ss_pred eeEEEEECCCCCe-EeEccCCCCcc-CccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC--cccCceEEEECCE
Confidence 56888886 4543 332 2222122 3344555566577755556777774 6722221111111 1223377778999
Q ss_pred EEEEeC
Q 030700 107 LYFTVS 112 (173)
Q Consensus 107 ~~v~~~ 112 (173)
.||+..
T Consensus 531 qyv~~~ 536 (689)
T 1yiq_A 531 QYVTFM 536 (689)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998753
No 324
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=92.91 E-value=2.4 Score=32.23 Aligned_cols=84 Identities=13% Similarity=0.048 Sum_probs=44.7
Q ss_pred ceEEcc---CCcEEEEEeCCCeEEEEc-c-CC--cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeec
Q 030700 54 GLTTTK---ENNVIIVCDSQQGLLKVS-E-EG--VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLV 126 (173)
Q Consensus 54 gl~~~~---~g~l~~v~~~~~~i~~~~-~-~g--~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~ 126 (173)
.++|++ ++.+ +++...++.+++. . +| ...+... .........++++|+|.++++.... . ....+.
T Consensus 183 ~l~fs~~~g~~~~-LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafSpdG~~lvs~s~~-~----~~w~la 254 (356)
T 2w18_A 183 ILTFAEVQGMQEA-LLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYSEMGLLFIVLSHP-C----AKESES 254 (356)
T ss_dssp EEEEEEEETSTTE-EEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEEETTEEEEEEC--------------
T ss_pred eEEeeccCCCCce-EEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEECCCCCEEEEeccC-C----Ccceee
Confidence 567776 6687 6665555666655 3 56 4444321 1112355667899999877653220 0 001223
Q ss_pred ccCCCceEEEEcCCCCeeE
Q 030700 127 SGEPHGVLLKYDPSTNQTS 145 (173)
Q Consensus 127 ~~~~~~~v~~~d~~~~~~~ 145 (173)
.+..++++..+|+.+++..
T Consensus 255 SGs~D~tIklWd~~tgk~l 273 (356)
T 2w18_A 255 LRSPVFQLIVINPKTTLSV 273 (356)
T ss_dssp ---CCEEEEEEETTTTEEE
T ss_pred ccCCCcEEEEEECCCCEEE
Confidence 4456678888898887643
No 325
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.52 E-value=1.2 Score=35.95 Aligned_cols=79 Identities=16% Similarity=0.254 Sum_probs=40.4
Q ss_pred CCeEEEEcC-CCcEEEec-cccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-cEEEEeccCCccccCCccEEEcCC
Q 030700 29 DGWIKRMHP-NGTWEDWH-QVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEASD 104 (173)
Q Consensus 29 ~~~i~~~~~-~g~~~~~~-~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~d 104 (173)
.+.|+.+|+ +|+.. |. +.......+...-.+| ++|++.....+..+|. +| +..-... ... ....-+++..+
T Consensus 465 ~G~l~A~D~~tG~~~-W~~~~~~~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW~~~~-~~g--~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSGKVV-WEHKEHLPLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELWKFQT-GSG--IVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTCCEE-EEEEESSCCCSCCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEEC-SSC--CCSCCEEEEET
T ss_pred cceEEEEECCCCCEE-EEecCCCCCcccceEeCCC-EEEEECCCCcEEEEECCCCCEEEEecC-CCC--cccCceEEEEC
Confidence 467888885 56532 21 1111112022222444 4487766566777885 67 3222222 111 12233677789
Q ss_pred CcEEEEeC
Q 030700 105 GSLYFTVS 112 (173)
Q Consensus 105 G~~~v~~~ 112 (173)
|++||+..
T Consensus 540 G~qYv~~~ 547 (582)
T 1flg_A 540 GEQYLGVT 547 (582)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 99998753
No 326
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=91.93 E-value=5 Score=33.68 Aligned_cols=101 Identities=11% Similarity=0.167 Sum_probs=57.4
Q ss_pred CCcceEEEcCC--CCEEEEcCCCeEEEEcCCC-cEEEecccc-------CccccceEEccC-CcEEEEEeCC------Ce
Q 030700 10 NHPEDVSVDGN--GVLYTATGDGWIKRMHPNG-TWEDWHQVG-------SQSLLGLTTTKE-NNVIIVCDSQ------QG 72 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~~~~~~~~i~~~~~~g-~~~~~~~~~-------~~p~~gl~~~~~-g~l~~v~~~~------~~ 72 (173)
....+|+++|. +.+|+....+.|+|-+-.| .+..+.... .... .|++++. .+.+|++... .+
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccE
Confidence 46788999983 6889887777899886445 466653321 2355 7888873 3444876533 34
Q ss_pred EEEEccCC--cEEEEeccC-C--ccc-cCCccEEEcCC--CcEEEEe
Q 030700 73 LLKVSEEG--VTVLVSQFN-G--SQL-RFANDVIEASD--GSLYFTV 111 (173)
Q Consensus 73 i~~~~~~g--~~~~~~~~~-~--~~~-~~~~~l~~~~d--G~~~v~~ 111 (173)
|++-.+.| .+.+..... + .+. .....|+++|. +.+|+..
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 55444455 333322111 0 000 12356899873 3577763
No 327
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=90.85 E-value=4.2 Score=30.84 Aligned_cols=66 Identities=9% Similarity=0.040 Sum_probs=35.3
Q ss_pred CcceEEEcCCCCEEEEcCCCeEEEEcC-CCcEE-EeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC
Q 030700 11 HPEDVSVDGNGVLYTATGDGWIKRMHP-NGTWE-DWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG 80 (173)
Q Consensus 11 ~p~~l~~~~~g~l~~~~~~~~i~~~~~-~g~~~-~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g 80 (173)
...+++++ +..++.+..++.|..|+. +++.. .+........ .+.+++ +.++++.....+..++. ++
T Consensus 161 ~v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~--~~l~s~s~dg~i~~wd~~~~ 229 (445)
T 2ovr_B 161 GVWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLHE--KRVVSGSRDATLRVWDIETG 229 (445)
T ss_dssp CEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEET--TEEEEEETTSEEEEEESSSC
T ss_pred CEEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEE-EEEecC--CEEEEEeCCCEEEEEECCCC
Confidence 34556665 234555557888888885 44433 2323333455 777753 45355554444555553 44
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.33 E-value=1.7 Score=32.69 Aligned_cols=21 Identities=24% Similarity=0.420 Sum_probs=16.6
Q ss_pred CCCEEEEcCCCeEEEEcC-CCc
Q 030700 20 NGVLYTATGDGWIKRMHP-NGT 40 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~ 40 (173)
++.+|+++.+|.|+.+|. +|+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~ 31 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGH 31 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEeCCCeEEEEECCCCc
Confidence 567888888899999985 554
No 329
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=89.39 E-value=8.7 Score=32.23 Aligned_cols=98 Identities=16% Similarity=0.164 Sum_probs=53.9
Q ss_pred cceEEEcC--CCCEEEEcCCCeEEEEcCCC-cEEEecccc------CccccceEEcc-CCcEEEEEeCC-CeEEEEccCC
Q 030700 12 PEDVSVDG--NGVLYTATGDGWIKRMHPNG-TWEDWHQVG------SQSLLGLTTTK-ENNVIIVCDSQ-QGLLKVSEEG 80 (173)
Q Consensus 12 p~~l~~~~--~g~l~~~~~~~~i~~~~~~g-~~~~~~~~~------~~p~~gl~~~~-~g~l~~v~~~~-~~i~~~~~~g 80 (173)
.+.++++| .+.+|+....+.|++-.-.| .+..+.... .... .|++++ +++.+|++... .++++-.+.|
T Consensus 123 ~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~-~i~~~p~~~~~~~~~~~~~~~v~~S~DgG 201 (789)
T 1sqj_A 123 GERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYT-SVIFDPERNGTIYASATAPQGMYVTHDGG 201 (789)
T ss_dssp CCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCEE-EEEECTTSTTCEEEEESSTTCEEEESSTT
T ss_pred eeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCeE-EEEECCCCCCEEEEEEcCCCeEEEEcCCC
Confidence 35799998 35788876556787764233 355543211 1234 577776 33444887654 4566544445
Q ss_pred --cEEEEeccCCc-------------cccCCccEEEcC-CCcEEEE
Q 030700 81 --VTVLVSQFNGS-------------QLRFANDVIEAS-DGSLYFT 110 (173)
Q Consensus 81 --~~~~~~~~~~~-------------~~~~~~~l~~~~-dG~~~v~ 110 (173)
.+.+.....+. .+..++.++++| ++.+|++
T Consensus 202 ~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~ 247 (789)
T 1sqj_A 202 VSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVT 247 (789)
T ss_dssp SSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEE
T ss_pred cCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEE
Confidence 33332111110 012347889988 6678887
No 330
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=88.82 E-value=0.66 Score=35.02 Aligned_cols=96 Identities=7% Similarity=0.091 Sum_probs=39.8
Q ss_pred CCCEEEEcCCCeEEEEcC-CCcEEEeccccCccccceEEccCCcEEEEEeCCCeEEEEcc-CC-c-EEEEeccCCccccC
Q 030700 20 NGVLYTATGDGWIKRMHP-NGTWEDWHQVGSQSLLGLTTTKENNVIIVCDSQQGLLKVSE-EG-V-TVLVSQFNGSQLRF 95 (173)
Q Consensus 20 ~g~l~~~~~~~~i~~~~~-~g~~~~~~~~~~~p~~gl~~~~~g~l~~v~~~~~~i~~~~~-~g-~-~~~~~~~~~~~~~~ 95 (173)
++.+|++..++.|+.+|+ +|+..-.... +. ...+.+++..+|++.....++.++. +| . ..+....
T Consensus 92 ~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---~~-~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~------- 160 (369)
T 2hz6_A 92 DGILYMGKKQDIWYVIDLLTGEKQQTLSS---AF-ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD------- 160 (369)
T ss_dssp ---CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-------
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEecC---CC-cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-------
Confidence 456666555667777775 3543211111 11 1223345555477654445777774 66 2 2221100
Q ss_pred CccEEEcC----CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCee
Q 030700 96 ANDVIEAS----DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQT 144 (173)
Q Consensus 96 ~~~l~~~~----dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 144 (173)
....+++. ++.+|++. .++.|+.+|+.+|+.
T Consensus 161 ~~~~~~~~~~~~~~~v~~~~------------------~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 161 YAASLPEDDVDYKMSHFVSN------------------GDGLVVTVDSESGDV 195 (369)
T ss_dssp ECCBCCCCCTTCCCCEEEEE------------------TSCEEEEECTTTCCE
T ss_pred ccCccccCCccccceEEEEC------------------CCCEEEEEECCCCcE
Confidence 01122233 36677764 236888899887764
No 331
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=87.36 E-value=11 Score=30.75 Aligned_cols=110 Identities=15% Similarity=0.119 Sum_probs=58.7
Q ss_pred CcEEEeccccCccccceEEcc-CCcEEEEEeCC------------CeEEEEcc-CC-cEEEEeccCCccccCCccEEEcC
Q 030700 39 GTWEDWHQVGSQSLLGLTTTK-ENNVIIVCDSQ------------QGLLKVSE-EG-VTVLVSQFNGSQLRFANDVIEAS 103 (173)
Q Consensus 39 g~~~~~~~~~~~p~~gl~~~~-~g~l~~v~~~~------------~~i~~~~~-~g-~~~~~~~~~~~~~~~~~~l~~~~ 103 (173)
++|....+.+..+. +.++.+ +|++ |+.... ..+..+|. .+ .+.+.... ........++++..
T Consensus 176 ~~W~~~~~~P~~~~-~~av~~~~g~l-~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~ 252 (656)
T 1k3i_A 176 GRWGPTIDLPIVPA-AAAIEPTSGRV-LMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDG 252 (656)
T ss_dssp CEEEEEEECSSCCS-EEEEETTTTEE-EEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECT
T ss_pred CeeeeeccCCCCce-eEEEEecCCEE-EEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-CCCCCccccccCCC
Confidence 34544433333566 777777 8888 665321 13555664 34 32222111 11112344578888
Q ss_pred CCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEeeccccCc---ceEEEccCCCEEEEE
Q 030700 104 DGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVLDGLYFA---NGVALSEDERFLVVC 169 (173)
Q Consensus 104 dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~p---~gi~~~~dg~~lyv~ 169 (173)
+|+||+.=.. ....+++||+.+.+-..+.. +..+ ..+++-++++ |||.
T Consensus 253 ~g~lyv~GG~----------------~~~~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~~~dg~-iyv~ 303 (656)
T 1k3i_A 253 NGQIVVTGGN----------------DAKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGR-VFTI 303 (656)
T ss_dssp TSCEEEECSS----------------STTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSC-EEEE
T ss_pred CCCEEEeCCC----------------CCCceEEecCcCCceeECCC-CCccccccceEEecCCe-EEEE
Confidence 9999997321 12378999998776544432 2222 3456666776 5553
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=84.96 E-value=14 Score=30.08 Aligned_cols=66 Identities=14% Similarity=0.079 Sum_probs=45.5
Q ss_pred CCcceEEEcCCCC-EEEEc-CCCeEEEEcC-------CCcE-------EEeccccCccccceEEccCCcEEEEEeCC-Ce
Q 030700 10 NHPEDVSVDGNGV-LYTAT-GDGWIKRMHP-------NGTW-------EDWHQVGSQSLLGLTTTKENNVIIVCDSQ-QG 72 (173)
Q Consensus 10 ~~p~~l~~~~~g~-l~~~~-~~~~i~~~~~-------~g~~-------~~~~~~~~~p~~gl~~~~~g~l~~v~~~~-~~ 72 (173)
+.|.|+-++|+|+ ++++. -...+..++. ++++ ..-.+.+..|. ..+||++|+. |.+..- +.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPl-Ht~Fd~~G~a-YTtlfidSq 400 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPL-HTTFDGRGNA-YTTLFIDSQ 400 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEE-EEEECSSSEE-EEEETTTTE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCccc-EEEECCCCce-Eeeeeecce
Confidence 7899999999995 55665 4556666652 2222 22234466898 9999999976 988743 56
Q ss_pred EEEEc
Q 030700 73 LLKVS 77 (173)
Q Consensus 73 i~~~~ 77 (173)
+++++
T Consensus 401 vvkWn 405 (638)
T 3sbq_A 401 VVKWN 405 (638)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77765
No 333
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=84.88 E-value=16 Score=30.38 Aligned_cols=100 Identities=14% Similarity=0.233 Sum_probs=57.2
Q ss_pred CcceEEEcCC--CCEEEEcCCCeEEEEcCCC-cEEEecccc-------CccccceEEcc-CCcEEEEEeCC---------
Q 030700 11 HPEDVSVDGN--GVLYTATGDGWIKRMHPNG-TWEDWHQVG-------SQSLLGLTTTK-ENNVIIVCDSQ--------- 70 (173)
Q Consensus 11 ~p~~l~~~~~--g~l~~~~~~~~i~~~~~~g-~~~~~~~~~-------~~p~~gl~~~~-~g~l~~v~~~~--------- 70 (173)
...+|+++|. +.+|+....+.|+|.+-.| .+..+.+.. .... .|++++ +.+.+|++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~-~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVE-SIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEE-EEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcc-eEEeCCCCCCEEEEEecccccccccCC
Confidence 6778999984 6899877667899986444 466653321 2245 788987 33343877531
Q ss_pred CeEEEEccCC--cEEEEeccC-C--ccc-cCCccEEEcCC--CcEEEEe
Q 030700 71 QGLLKVSEEG--VTVLVSQFN-G--SQL-RFANDVIEASD--GSLYFTV 111 (173)
Q Consensus 71 ~~i~~~~~~g--~~~~~~~~~-~--~~~-~~~~~l~~~~d--G~~~v~~ 111 (173)
.++++-.+.| .+.+..... + .+- .....|+++|. +.+|+..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 2455544555 344432211 0 000 12367899874 3566654
No 334
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=78.67 E-value=27 Score=28.94 Aligned_cols=144 Identities=20% Similarity=0.322 Sum_probs=74.6
Q ss_pred ceEEEcC-C-CCEEEEcCC-CeEEEEcCCC-cEEEeccccC-----------------ccccceEEccC--------CcE
Q 030700 13 EDVSVDG-N-GVLYTATGD-GWIKRMHPNG-TWEDWHQVGS-----------------QSLLGLTTTKE--------NNV 63 (173)
Q Consensus 13 ~~l~~~~-~-g~l~~~~~~-~~i~~~~~~g-~~~~~~~~~~-----------------~p~~gl~~~~~--------g~l 63 (173)
+.|+++| + +.||+.... ..|++=.-.| .+..+..... ... .+++++. +++
T Consensus 135 ~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~-~v~~dp~~~~~~~~~~~v 213 (737)
T 2cn3_A 135 ERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVV-WVVFDKSSSTPGNPTKTI 213 (737)
T ss_dssp CCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEE-EEEECGGGSCTTSCCSCE
T ss_pred ceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCCCcccccCcccccccCCCCEE-EEEcCCCCcccCCCCCEE
Confidence 6799998 3 578887633 5677653223 3555432110 122 3667653 256
Q ss_pred EEEEeCC--CeEEEEccCC--cEEEEeccCCccc-cCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEc
Q 030700 64 IIVCDSQ--QGLLKVSEEG--VTVLVSQFNGSQL-RFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYD 138 (173)
Q Consensus 64 ~~v~~~~--~~i~~~~~~g--~~~~~~~~~~~~~-~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 138 (173)
|++... .++++-.+.| .+.+. +.+. ..+..++++|++.+|++.... .+ ++ .....+.|++.+
T Consensus 214 -~~~~~~~~~~v~~S~DgG~tW~~~~----~~p~~~~~~~~~~~~~~~l~~~~~d~-~g--~y-----~~~~~g~v~~s~ 280 (737)
T 2cn3_A 214 -YVGVADKNESIYRSTDGGVTWKAVP----GQPKGLLPHHGVLASNGMLYITYGDT-CG--PY-----DGNGKGQVWKFN 280 (737)
T ss_dssp -EEEESCSSCCEEEESSTTSCCEECT----TCCCSSEEEEEEECTTSEEEEEEESS-CC--SS-----CCSCCEEEEEEE
T ss_pred -EEEecCCCccEEEEcCCCCceEECC----CCCCcccceEEEECCCCeEEEEecCC-CC--cc-----ccccCceEEEEe
Confidence 887543 2455543444 23222 2111 234567788888899864210 00 00 012346899988
Q ss_pred CCCCeeEEeecccc----Cc---ceEEEccC-CCEEEEEe
Q 030700 139 PSTNQTSLVLDGLY----FA---NGVALSED-ERFLVVCE 170 (173)
Q Consensus 139 ~~~~~~~~~~~~~~----~p---~gi~~~~d-g~~lyv~~ 170 (173)
..+..-+.+..... .+ .+|+++|. .+.||++.
T Consensus 281 d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~ 320 (737)
T 2cn3_A 281 TRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTS 320 (737)
T ss_dssp TTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEE
T ss_pred CCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEe
Confidence 76554443332111 11 25888874 45688764
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=76.35 E-value=20 Score=26.24 Aligned_cols=86 Identities=13% Similarity=0.178 Sum_probs=45.2
Q ss_pred CCCCEEEEc--CCCeEEEEcCC---CcEEEecccc--Cc-cccceEEccCCcEEEEEeCC-----------CeEEEEcc-
Q 030700 19 GNGVLYTAT--GDGWIKRMHPN---GTWEDWHQVG--SQ-SLLGLTTTKENNVIIVCDSQ-----------QGLLKVSE- 78 (173)
Q Consensus 19 ~~g~l~~~~--~~~~i~~~~~~---g~~~~~~~~~--~~-p~~gl~~~~~g~l~~v~~~~-----------~~i~~~~~- 78 (173)
-++.||+.. ....++++|+. .+|..+.... .. -. +++. -++++ |+.... +.+.+++.
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~-~~~~-~~~~l-yv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQA-TSAF-IDGNL-YVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSC-EEEE-ETTEE-EEECCEEECTTSCEEECCCEEEEETT
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccc-eEEE-ECCEE-EEEcCCCCCCCccceeeccEEEEeCC
Confidence 378899765 34579999974 6777664322 12 22 3333 45677 775432 23666665
Q ss_pred CC-cEEEEeccCCccccC-CccEEEcCCCcEEEEe
Q 030700 79 EG-VTVLVSQFNGSQLRF-ANDVIEASDGSLYFTV 111 (173)
Q Consensus 79 ~g-~~~~~~~~~~~~~~~-~~~l~~~~dG~~~v~~ 111 (173)
+. .+.+.... |..+ -..++. -++.||+.-
T Consensus 95 ~~~W~~~~~~~---p~~r~~~~~~~-~~~~iyv~G 125 (357)
T 2uvk_A 95 TNSWVKLMSHA---PMGMAGHVTFV-HNGKAYVTG 125 (357)
T ss_dssp TTEEEECSCCC---SSCCSSEEEEE-ETTEEEEEE
T ss_pred CCcEEECCCCC---CcccccceEEE-ECCEEEEEe
Confidence 33 33332211 1122 233343 577888864
No 336
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=69.76 E-value=48 Score=27.64 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=53.2
Q ss_pred ceEEEcC--CCCEEEEcCCCeEEEEcCCC-cEEEecccc------CccccceEEccC--CcEEEEEeCCC-eEEEEccCC
Q 030700 13 EDVSVDG--NGVLYTATGDGWIKRMHPNG-TWEDWHQVG------SQSLLGLTTTKE--NNVIIVCDSQQ-GLLKVSEEG 80 (173)
Q Consensus 13 ~~l~~~~--~g~l~~~~~~~~i~~~~~~g-~~~~~~~~~------~~p~~gl~~~~~--g~l~~v~~~~~-~i~~~~~~g 80 (173)
+.|+++| .+.+|+....+.|++=.-.| .+....... .... .|++++. +++ |++.... .+++-.+.|
T Consensus 136 ~~l~v~p~~~~~v~a~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~-~i~~~p~~~~~~-~~~~~~~g~v~~S~DgG 213 (763)
T 3a0f_A 136 ERLAVNPHWTDELWFGSRTQGLWRSTDRAQTWSRMNQLPDSSTYGIGII-SVIFDPKNVGTA-YVASHAVGGLWVTWDGG 213 (763)
T ss_dssp CCEEECTTSTTCEEEECSSSCEEEESSTTSSCEECTTSCCCSCTTTCEE-EEEECSSSTTCE-EEEESSTTCEEEESSSS
T ss_pred ceEEECCCCCCEEEEEeCCCcEEEECCCCcCccccccCcccCCCccceE-EEEECCCCCCEE-EEEEeCCCeEEEECCCC
Confidence 4689998 36899877656788664223 455543211 1234 5677764 355 8876554 355544445
Q ss_pred --cEEEEeccCCc-----------------cccCCccEEEcCCCcEEEE
Q 030700 81 --VTVLVSQFNGS-----------------QLRFANDVIEASDGSLYFT 110 (173)
Q Consensus 81 --~~~~~~~~~~~-----------------~~~~~~~l~~~~dG~~~v~ 110 (173)
.+.+....... ....+..++++++|.+|++
T Consensus 214 ~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~ 262 (763)
T 3a0f_A 214 ANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYIT 262 (763)
T ss_dssp SSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEE
T ss_pred CCccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEE
Confidence 33322111000 0123466788888899987
No 337
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=67.20 E-value=54 Score=27.31 Aligned_cols=100 Identities=12% Similarity=0.199 Sum_probs=55.9
Q ss_pred CCcceEEEcCC--CCEEEEcCCCeEEEEcCCC-cEEEecccc------------CccccceEEcc-CCcEEEEEeC----
Q 030700 10 NHPEDVSVDGN--GVLYTATGDGWIKRMHPNG-TWEDWHQVG------------SQSLLGLTTTK-ENNVIIVCDS---- 69 (173)
Q Consensus 10 ~~p~~l~~~~~--g~l~~~~~~~~i~~~~~~g-~~~~~~~~~------------~~p~~gl~~~~-~g~l~~v~~~---- 69 (173)
....+|+++|. ..+|+....+.|+|-.-.| .+..+.... .... .|++++ +.+.+|++..
T Consensus 21 g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~ 99 (763)
T 3a0f_A 21 GFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQ 99 (763)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTT
T ss_pred CceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEeccccc
Confidence 46788999994 4788877667898886444 466553311 1245 788887 3334387653
Q ss_pred ---CCeEEEEccCC--cEEEEeccC-C-ccccC--CccEEEcCC--CcEEEE
Q 030700 70 ---QQGLLKVSEEG--VTVLVSQFN-G-SQLRF--ANDVIEASD--GSLYFT 110 (173)
Q Consensus 70 ---~~~i~~~~~~g--~~~~~~~~~-~-~~~~~--~~~l~~~~d--G~~~v~ 110 (173)
..+|++-.+.| .+.+..... + ..... ...|+++|. +.+|+.
T Consensus 100 ~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~ 151 (763)
T 3a0f_A 100 WDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFG 151 (763)
T ss_dssp TCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEE
T ss_pred CCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEE
Confidence 23455544445 344432111 0 00001 146899874 568876
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=64.44 E-value=14 Score=27.81 Aligned_cols=24 Identities=17% Similarity=0.191 Sum_probs=18.7
Q ss_pred CCCCEEEEcCCCeEEEEcC-CCcEE
Q 030700 19 GNGVLYTATGDGWIKRMHP-NGTWE 42 (173)
Q Consensus 19 ~~g~l~~~~~~~~i~~~~~-~g~~~ 42 (173)
.+|.+|+...+++++.+|. +|+..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEE
Confidence 4678898888899999995 56644
No 339
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=60.83 E-value=65 Score=26.05 Aligned_cols=63 Identities=14% Similarity=0.137 Sum_probs=39.7
Q ss_pred eEEEcCCCCEEEEc--CCCeEEEEcC-CCcEEEecccc--CccccceEEccCCcEEEEEeC-C------CeEEEEcc
Q 030700 14 DVSVDGNGVLYTAT--GDGWIKRMHP-NGTWEDWHQVG--SQSLLGLTTTKENNVIIVCDS-Q------QGLLKVSE 78 (173)
Q Consensus 14 ~l~~~~~g~l~~~~--~~~~i~~~~~-~g~~~~~~~~~--~~p~~gl~~~~~g~l~~v~~~-~------~~i~~~~~ 78 (173)
+.++..+|.||+.. ....++++|+ ++++....... ..-. +.++.++|++ |+... . ..+.++|+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~-s~~~~~dg~i-yv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQ-SSATMSDGRV-FTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSC-EEEECTTSCE-EEECCCCCSSSCCCCEEEEET
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccccc-ceEEecCCeE-EEEeCcccCCcccccceEeCC
Confidence 36777899999776 3457999996 45677653221 1224 5566678898 77654 1 23666665
No 340
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=31.47 E-value=2.2e+02 Score=23.56 Aligned_cols=67 Identities=10% Similarity=0.099 Sum_probs=38.6
Q ss_pred ceEEEcC-CC-CEEEEcC------CCeEEEEcCCC-cEEEeccccCccccceEEccC-CcEEEEEeCCCeEEEEccCC
Q 030700 13 EDVSVDG-NG-VLYTATG------DGWIKRMHPNG-TWEDWHQVGSQSLLGLTTTKE-NNVIIVCDSQQGLLKVSEEG 80 (173)
Q Consensus 13 ~~l~~~~-~g-~l~~~~~------~~~i~~~~~~g-~~~~~~~~~~~p~~gl~~~~~-g~l~~v~~~~~~i~~~~~~g 80 (173)
..|+++| +. .+|++.. .+.|++-.-.| .|..+........ .|+++|. .+.+|++....++++-.+.|
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~~-~l~~~P~~~~~l~a~~~~~gly~S~DgG 169 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPLT-QMMYSPQNSDYLLALSTENGLWVSKNFG 169 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBSS-CCEEETTEEEEEEEEBTTCCEEEESSTT
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCce-EEEEecCCCCEEEEEECCCCEEEEeCCC
Confidence 4789998 43 7886653 56788765334 3555432222223 5888874 34436655455677655555
No 341
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=31.43 E-value=46 Score=18.59 Aligned_cols=16 Identities=25% Similarity=0.360 Sum_probs=12.9
Q ss_pred ceEEEEcCCCCeeEEe
Q 030700 132 GVLLKYDPSTNQTSLV 147 (173)
Q Consensus 132 ~~v~~~d~~~~~~~~~ 147 (173)
=.||+||++++++...
T Consensus 40 iKIykyde~tNeI~Lk 55 (72)
T 3kvp_A 40 IKIYEYNESRNEVKLK 55 (72)
T ss_dssp EEEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCCeEEEE
Confidence 3899999998887554
No 342
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=27.94 E-value=1.6e+02 Score=20.68 Aligned_cols=109 Identities=14% Similarity=0.145 Sum_probs=55.9
Q ss_pred CCCEEEEc-C------CCeEEEEcC-CCcEEEecccc-C-ccccceEEccCCcEEEEEeC----------CCeEEEEcc-
Q 030700 20 NGVLYTAT-G------DGWIKRMHP-NGTWEDWHQVG-S-QSLLGLTTTKENNVIIVCDS----------QQGLLKVSE- 78 (173)
Q Consensus 20 ~g~l~~~~-~------~~~i~~~~~-~g~~~~~~~~~-~-~p~~gl~~~~~g~l~~v~~~----------~~~i~~~~~- 78 (173)
++.||+.. . ...++++|+ ++++....... . ..+ .++. .++++ |+... .+.+..++.
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i-yv~GG~~~~~~~~~~~~~~~~yd~~ 177 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSH-GMVE-ANGLI-YVCGGSLGNNVSGRVLNSCEVYDPA 177 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEE-EEECCEESCTTTCEECCCEEEEETT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCccee-EEEE-ECCEE-EEECCCCCCCCcccccceEEEeCCC
Confidence 67888654 1 135889986 45666653321 1 222 3333 46677 77653 223666775
Q ss_pred CC-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEe
Q 030700 79 EG-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLV 147 (173)
Q Consensus 79 ~g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 147 (173)
+. .+.+..... + ..-..++.. +++||+.-.... ......+++||+.+.+-+.+
T Consensus 178 ~~~W~~~~~~p~--~-r~~~~~~~~-~~~i~v~GG~~~------------~~~~~~~~~yd~~~~~W~~~ 231 (306)
T 3ii7_A 178 TETWTELCPMIE--A-RKNHGLVFV-KDKIFAVGGQNG------------LGGLDNVEYYDIKLNEWKMV 231 (306)
T ss_dssp TTEEEEECCCSS--C-CBSCEEEEE-TTEEEEECCEET------------TEEBCCEEEEETTTTEEEEC
T ss_pred CCeEEECCCccc--h-hhcceEEEE-CCEEEEEeCCCC------------CCCCceEEEeeCCCCcEEEC
Confidence 33 344332111 1 122334433 678888632100 01124789999987765544
No 343
>1wi9_A Protein C20ORF116 homolog; helix-turn-helix motif, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.4.5.47
Probab=22.76 E-value=35 Score=19.35 Aligned_cols=16 Identities=25% Similarity=0.648 Sum_probs=11.5
Q ss_pred ceEEEccCCCEEEEEec
Q 030700 155 NGVALSEDERFLVVCES 171 (173)
Q Consensus 155 ~gi~~~~dg~~lyv~~~ 171 (173)
+|+ ++..|+++||++.
T Consensus 52 tGV-iDDRGKfIyIs~e 67 (72)
T 1wi9_A 52 TGV-IDDRGKFIYITPS 67 (72)
T ss_dssp CEE-ECTTCCEEECCCS
T ss_pred EEE-EeCCCCEEEecHH
Confidence 454 4668999999864
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=21.79 E-value=2.2e+02 Score=20.11 Aligned_cols=110 Identities=11% Similarity=0.041 Sum_probs=56.4
Q ss_pred CCCEEEEcC---------CCeEEEEcC-CCcEEEecccc-Cc-cccceEEccCCcEEEEEeCC-------CeEEEEccC-
Q 030700 20 NGVLYTATG---------DGWIKRMHP-NGTWEDWHQVG-SQ-SLLGLTTTKENNVIIVCDSQ-------QGLLKVSEE- 79 (173)
Q Consensus 20 ~g~l~~~~~---------~~~i~~~~~-~g~~~~~~~~~-~~-p~~gl~~~~~g~l~~v~~~~-------~~i~~~~~~- 79 (173)
++.||+... ...++++|+ ++++....+.. .. .+ .++. .++++ |+.... +.+.+++..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~i-yv~GG~~~~~~~~~~~~~yd~~~ 174 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLV-YVIGGKGSDRKCLNKMCVYDPKK 174 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEE-EEECCBCTTSCBCCCEEEEETTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEE-EEEeCCCCCCcccceEEEEeCCC
Confidence 678886542 134888986 45676654321 12 22 3333 56677 776532 246777753
Q ss_pred C-cEEEEeccCCccccCCccEEEcCCCcEEEEeCcCCcCcccceeeecccCCCceEEEEcCCCCeeEEee
Q 030700 80 G-VTVLVSQFNGSQLRFANDVIEASDGSLYFTVSSTKFTPAEYYLDLVSGEPHGVLLKYDPSTNQTSLVL 148 (173)
Q Consensus 80 g-~~~~~~~~~~~~~~~~~~l~~~~dG~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 148 (173)
. -+.+... .. + ..-..++.. +++||+.-.... ......+++||+++.+-..+.
T Consensus 175 ~~W~~~~~~-p~-~-r~~~~~~~~-~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 175 FEWKELAPM-QT-A-RSLFGATVH-DGRIIVAAGVTD------------TGLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp TEEEECCCC-SS-C-CBSCEEEEE-TTEEEEEEEECS------------SSEEEEEEEEETTTTEEEEEC
T ss_pred CeEEECCCC-CC-c-hhceEEEEE-CCEEEEEeccCC------------CCccceEEEEECCCCeEEECC
Confidence 3 3333221 11 1 122333333 678888632110 012247899999887655554
No 345
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=21.18 E-value=3.6e+02 Score=22.38 Aligned_cols=74 Identities=11% Similarity=0.122 Sum_probs=37.0
Q ss_pred CeEEEEcCCC-cEEEeccccCc-----cccceEEccC-C-cEEEEEeC------CCeEEEEccCC--cEEEEeccCCccc
Q 030700 30 GWIKRMHPNG-TWEDWHQVGSQ-----SLLGLTTTKE-N-NVIIVCDS------QQGLLKVSEEG--VTVLVSQFNGSQL 93 (173)
Q Consensus 30 ~~i~~~~~~g-~~~~~~~~~~~-----p~~gl~~~~~-g-~l~~v~~~------~~~i~~~~~~g--~~~~~~~~~~~~~ 93 (173)
+.|+|-+-.| .|..+...... .. .|+++|. . ++ |++.. ..++++-.+.| .+.+.. +..
T Consensus 65 ggvyrS~DgG~TW~~v~~~~~~~~~~~~~-~IavdP~dp~~v-yvag~~~~~~~~g~v~rS~DgG~TW~~~~~--p~~-- 138 (685)
T 3f6k_A 65 SKLYRSEDYGKNFKDITDLINNTFIRTEF-GMAIGPENSGKV-VLTAEVSGGSRGGRIFRSSDFAKNFVQTDL--PFH-- 138 (685)
T ss_dssp EEEEEESSTTSSCEECGGGGTTCCBCGGG-CEEECSTTCCCE-EEEECCCTTCSSCEEEEESSTTSSCEEEEC--SSC--
T ss_pred CeEEEEeCCCCCceECcCCCCCCccccee-EEEECCCCCCEE-EEEEeccCCCCCceEEEECCCCceeEeccC--CCC--
Confidence 4677765334 46665432221 24 7889873 3 56 66654 23455544555 444331 111
Q ss_pred cCCccEEEcCCC--cEEEE
Q 030700 94 RFANDVIEASDG--SLYFT 110 (173)
Q Consensus 94 ~~~~~l~~~~dG--~~~v~ 110 (173)
....|+++|.. .+|+.
T Consensus 139 -~~~~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 139 -PLTQMMYSPQNSDYLLAL 156 (685)
T ss_dssp -BSSCCEEETTEEEEEEEE
T ss_pred -CceEEEEecCCCCEEEEE
Confidence 11357777742 35554
No 346
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=20.29 E-value=2.9e+02 Score=21.82 Aligned_cols=27 Identities=11% Similarity=0.172 Sum_probs=18.6
Q ss_pred ceEEEcC-CCCEEEEcCCCeEEEEcCCCc
Q 030700 13 EDVSVDG-NGVLYTATGDGWIKRMHPNGT 40 (173)
Q Consensus 13 ~~l~~~~-~g~l~~~~~~~~i~~~~~~g~ 40 (173)
.-+..|+ .|.|||+.. ++||+++++=+
T Consensus 18 ~~l~ld~~~~~lYVGA~-n~ly~L~~~L~ 45 (527)
T 4fww_A 18 VTYEGDRNESAVFVAIR-NRLHVLGPDLK 45 (527)
T ss_dssp EEEECTTSCEEEEEEET-TEEEEECTTSC
T ss_pred EEEEEcCCCCEEEEEEe-ceEEEeCCCcc
Confidence 3455577 468999875 57999986543
Done!