Query 030701
Match_columns 173
No_of_seqs 223 out of 2573
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:17:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/030701.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/030701hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12796 Ank_2: Ankyrin repeat 99.6 1.6E-14 3.4E-19 98.9 9.2 78 93-170 1-83 (89)
2 KOG4412 26S proteasome regulat 99.5 3.8E-14 8.2E-19 109.7 7.3 115 38-169 36-162 (226)
3 KOG0195 Integrin-linked kinase 99.4 8E-13 1.7E-17 108.9 6.6 79 90-168 35-122 (448)
4 KOG4412 26S proteasome regulat 99.4 5.7E-13 1.2E-17 103.2 4.3 75 96-170 45-130 (226)
5 KOG0508 Ankyrin repeat protein 99.4 5.8E-13 1.3E-17 115.4 4.6 74 96-169 124-206 (615)
6 PHA02791 ankyrin-like protein; 99.3 4.7E-12 1E-16 105.2 8.8 77 94-170 133-218 (284)
7 PHA02791 ankyrin-like protein; 99.3 4E-12 8.6E-17 105.7 8.0 75 94-168 66-150 (284)
8 PHA02741 hypothetical protein; 99.3 9.5E-12 2.1E-16 95.4 9.4 77 94-170 65-156 (169)
9 PF13857 Ank_5: Ankyrin repeat 99.3 1.3E-12 2.8E-17 83.0 3.8 49 108-156 1-56 (56)
10 PHA02743 Viral ankyrin protein 99.3 9.1E-12 2E-16 95.4 8.1 79 93-171 61-153 (166)
11 KOG4214 Myotrophin and similar 99.3 6.9E-12 1.5E-16 87.6 6.6 74 92-165 37-116 (117)
12 PHA02875 ankyrin repeat protei 99.3 1.1E-11 2.3E-16 106.7 9.0 78 93-170 106-192 (413)
13 KOG0509 Ankyrin repeat and DHH 99.3 4.7E-12 1E-16 112.6 6.8 71 84-158 77-154 (600)
14 PHA02736 Viral ankyrin protein 99.3 5.9E-12 1.3E-16 94.7 5.7 79 93-171 59-151 (154)
15 PHA02878 ankyrin repeat protei 99.3 1.7E-11 3.7E-16 107.8 9.1 79 92-170 171-259 (477)
16 PHA02884 ankyrin repeat protei 99.2 3.6E-11 7.8E-16 100.7 9.1 66 92-157 73-145 (300)
17 PLN03192 Voltage-dependent pot 99.2 3.1E-11 6.8E-16 112.9 9.6 80 85-168 525-613 (823)
18 KOG0512 Fetal globin-inducing 99.2 3.7E-11 7.9E-16 92.8 7.4 64 94-157 102-171 (228)
19 PHA02795 ankyrin-like protein; 99.2 2.7E-11 5.8E-16 105.7 7.4 76 94-169 193-285 (437)
20 PHA02884 ankyrin repeat protei 99.2 5.6E-11 1.2E-15 99.5 9.1 75 96-170 40-128 (300)
21 PHA02874 ankyrin repeat protei 99.2 5.7E-11 1.2E-15 103.2 9.1 78 93-170 128-214 (434)
22 KOG4214 Myotrophin and similar 99.2 4.1E-11 8.9E-16 83.8 6.6 78 96-173 9-94 (117)
23 KOG0508 Ankyrin repeat protein 99.2 2.5E-11 5.4E-16 105.3 6.5 120 42-170 44-174 (615)
24 PHA02859 ankyrin repeat protei 99.2 8.3E-11 1.8E-15 93.3 8.9 68 101-168 102-181 (209)
25 PHA02875 ankyrin repeat protei 99.2 7.6E-11 1.7E-15 101.4 9.0 76 95-170 74-159 (413)
26 KOG0509 Ankyrin repeat and DHH 99.2 4E-11 8.7E-16 106.7 7.4 77 93-169 116-201 (600)
27 PHA03100 ankyrin repeat protei 99.2 8.6E-11 1.9E-15 102.7 8.9 80 91-170 217-307 (480)
28 PHA02741 hypothetical protein; 99.2 8.5E-11 1.8E-15 90.1 7.8 74 94-167 26-119 (169)
29 KOG0515 p53-interacting protei 99.2 4.7E-11 1E-15 104.7 7.1 79 87-169 552-639 (752)
30 PTZ00322 6-phosphofructo-2-kin 99.2 1.8E-10 3.9E-15 105.6 10.7 76 93-168 86-170 (664)
31 PHA02859 ankyrin repeat protei 99.2 9.5E-11 2E-15 93.0 7.7 78 93-170 55-149 (209)
32 PHA02946 ankyin-like protein; 99.2 1.1E-10 2.4E-15 102.5 8.7 56 101-156 51-112 (446)
33 KOG0512 Fetal globin-inducing 99.2 1.4E-10 3E-15 89.6 7.8 75 96-170 70-154 (228)
34 PHA03095 ankyrin-like protein; 99.1 1.5E-10 3.2E-15 100.8 8.9 74 96-169 54-142 (471)
35 PHA02878 ankyrin repeat protei 99.1 1.9E-10 4.2E-15 101.1 9.2 78 93-170 205-291 (477)
36 PF13637 Ank_4: Ankyrin repeat 99.1 1E-10 2.2E-15 73.4 5.0 51 116-166 1-54 (54)
37 PLN03192 Voltage-dependent pot 99.1 2.3E-10 5.1E-15 107.1 8.9 79 92-170 561-679 (823)
38 PHA03100 ankyrin repeat protei 99.1 2.5E-10 5.5E-15 99.7 8.2 78 93-170 110-200 (480)
39 KOG0502 Integral membrane anky 99.1 1.7E-10 3.6E-15 92.1 6.2 79 87-169 162-249 (296)
40 KOG4177 Ankyrin [Cell wall/mem 99.1 1.8E-10 3.9E-15 109.3 6.9 75 92-166 543-626 (1143)
41 PHA03095 ankyrin-like protein; 99.1 4.1E-10 9E-15 98.0 8.7 84 86-170 12-108 (471)
42 PF12796 Ank_2: Ankyrin repeat 99.1 5E-10 1.1E-14 76.4 6.9 53 94-146 31-89 (89)
43 KOG0514 Ankyrin repeat protein 99.1 1.5E-10 3.3E-15 97.8 4.9 76 93-168 272-395 (452)
44 PHA02743 Viral ankyrin protein 99.1 3.6E-10 7.9E-15 86.5 6.6 76 88-167 23-115 (166)
45 KOG4177 Ankyrin [Cell wall/mem 99.0 2.8E-10 6.2E-15 108.0 6.5 82 89-170 507-597 (1143)
46 PHA02946 ankyin-like protein; 99.0 6.4E-10 1.4E-14 97.7 8.2 75 92-168 300-377 (446)
47 PHA02874 ankyrin repeat protei 99.0 1E-09 2.3E-14 95.3 9.0 66 92-157 160-231 (434)
48 PHA02876 ankyrin repeat protei 99.0 9.4E-10 2E-14 100.7 8.8 79 92-170 378-467 (682)
49 PHA02798 ankyrin-like protein; 99.0 9.1E-10 2E-14 97.3 7.9 72 99-170 86-172 (489)
50 KOG0514 Ankyrin repeat protein 99.0 2.2E-09 4.7E-14 90.9 8.3 74 94-167 345-428 (452)
51 PHA02989 ankyrin repeat protei 99.0 2E-09 4.4E-14 95.2 8.5 51 118-168 258-311 (494)
52 PHA02716 CPXV016; CPX019; EVM0 99.0 2.1E-09 4.5E-14 99.6 8.7 69 99-167 189-271 (764)
53 PHA02795 ankyrin-like protein; 99.0 1.3E-09 2.8E-14 95.3 6.9 80 87-170 151-245 (437)
54 KOG0195 Integrin-linked kinase 99.0 1.3E-09 2.8E-14 90.2 6.2 65 93-157 71-141 (448)
55 PHA02989 ankyrin repeat protei 98.9 2.6E-09 5.6E-14 94.5 8.4 71 100-170 86-171 (494)
56 PHA02876 ankyrin repeat protei 98.9 3.5E-09 7.6E-14 97.0 9.4 75 94-168 150-233 (682)
57 KOG1710 MYND Zn-finger and ank 98.9 2.5E-09 5.5E-14 88.2 6.3 86 82-171 42-137 (396)
58 PHA02716 CPXV016; CPX019; EVM0 98.9 4.1E-09 9E-14 97.6 8.4 76 95-170 290-390 (764)
59 PHA02917 ankyrin-like protein; 98.9 4.9E-09 1.1E-13 96.2 8.3 72 96-167 145-252 (661)
60 PHA02798 ankyrin-like protein; 98.9 3E-09 6.5E-14 94.0 6.7 75 96-170 45-136 (489)
61 TIGR00870 trp transient-recept 98.9 3.1E-09 6.6E-14 98.4 6.9 67 92-158 131-217 (743)
62 PHA02792 ankyrin-like protein; 98.9 4E-09 8.8E-14 95.6 7.5 102 65-170 319-434 (631)
63 PHA02917 ankyrin-like protein; 98.9 7.7E-09 1.7E-13 94.9 8.0 77 94-170 108-220 (661)
64 KOG0510 Ankyrin repeat protein 98.8 6.9E-09 1.5E-13 95.0 7.5 78 93-170 310-401 (929)
65 PF13637 Ank_4: Ankyrin repeat 98.8 1.4E-08 2.9E-13 63.6 6.0 44 93-136 5-54 (54)
66 PHA02736 Viral ankyrin protein 98.8 8.3E-09 1.8E-13 77.5 5.2 73 95-167 23-113 (154)
67 COG0666 Arp FOG: Ankyrin repea 98.8 3.8E-08 8.2E-13 75.4 8.6 74 94-167 111-201 (235)
68 cd00204 ANK ankyrin repeats; 98.8 6.1E-08 1.3E-12 67.8 8.9 72 96-167 14-94 (126)
69 KOG0510 Ankyrin repeat protein 98.8 1.7E-08 3.6E-13 92.5 7.4 81 90-170 274-365 (929)
70 KOG0818 GTPase-activating prot 98.8 3.4E-08 7.3E-13 86.4 8.7 71 83-157 131-208 (669)
71 KOG0502 Integral membrane anky 98.7 1.3E-08 2.8E-13 81.4 5.0 63 95-157 199-267 (296)
72 PHA02730 ankyrin-like protein; 98.7 3.2E-08 6.9E-13 90.5 7.8 78 93-170 382-486 (672)
73 COG0666 Arp FOG: Ankyrin repea 98.7 8.3E-08 1.8E-12 73.5 8.7 75 95-169 79-170 (235)
74 KOG0505 Myosin phosphatase, re 98.7 4.7E-08 1E-12 85.9 7.4 75 96-170 47-130 (527)
75 PHA02730 ankyrin-like protein; 98.7 6.6E-08 1.4E-12 88.5 8.5 77 87-167 43-137 (672)
76 PHA02792 ankyrin-like protein; 98.7 6.6E-08 1.4E-12 87.8 8.1 62 96-157 381-451 (631)
77 KOG0506 Glutaminase (contains 98.6 3.3E-08 7.2E-13 86.1 4.9 82 85-170 506-597 (622)
78 KOG3676 Ca2+-permeable cation 98.6 7.9E-08 1.7E-12 88.0 7.4 80 92-171 187-298 (782)
79 PF00023 Ank: Ankyrin repeat H 98.6 6.6E-08 1.4E-12 54.6 4.3 32 116-147 2-33 (33)
80 cd00204 ANK ankyrin repeats; 98.6 3.1E-07 6.7E-12 64.2 8.5 70 96-165 47-125 (126)
81 PF13606 Ank_3: Ankyrin repeat 98.6 6.7E-08 1.4E-12 53.7 3.7 29 116-144 2-30 (30)
82 KOG0507 CASK-interacting adapt 98.6 4.9E-08 1.1E-12 88.9 4.2 75 93-167 86-169 (854)
83 KOG0705 GTPase-activating prot 98.5 1.9E-07 4.1E-12 83.0 6.7 75 96-170 631-718 (749)
84 KOG0515 p53-interacting protei 98.5 2.8E-07 6E-12 81.4 6.6 79 83-165 581-671 (752)
85 KOG0505 Myosin phosphatase, re 98.4 3.3E-07 7.2E-12 80.7 5.7 82 81-166 69-156 (527)
86 KOG0511 Ankyrin repeat protein 98.4 1.1E-06 2.3E-11 75.1 8.0 83 86-172 37-125 (516)
87 TIGR00870 trp transient-recept 98.4 6.5E-07 1.4E-11 83.0 6.6 76 92-167 178-278 (743)
88 PTZ00322 6-phosphofructo-2-kin 98.3 1.5E-06 3.2E-11 80.1 7.5 65 93-157 119-196 (664)
89 KOG0507 CASK-interacting adapt 98.3 5.2E-07 1.1E-11 82.4 4.3 83 84-170 48-139 (854)
90 KOG1710 MYND Zn-finger and ank 98.3 2.6E-06 5.6E-11 70.7 6.9 80 87-170 14-103 (396)
91 KOG0783 Uncharacterized conser 98.2 1.6E-06 3.5E-11 80.1 3.7 64 94-157 57-127 (1267)
92 KOG4369 RTK signaling protein 98.1 1.7E-06 3.6E-11 82.1 3.9 78 95-172 763-850 (2131)
93 KOG0522 Ankyrin repeat protein 98.1 4.1E-06 8.8E-11 74.0 5.8 77 94-170 25-113 (560)
94 KOG3676 Ca2+-permeable cation 98.1 6.1E-06 1.3E-10 75.9 6.9 76 92-167 243-329 (782)
95 KOG2505 Ankyrin repeat protein 97.9 2.6E-05 5.7E-10 68.6 6.7 70 101-170 403-484 (591)
96 PF13857 Ank_5: Ankyrin repeat 97.9 1.9E-05 4E-10 49.8 3.7 32 92-123 19-56 (56)
97 KOG4369 RTK signaling protein 97.7 3.5E-05 7.6E-10 73.5 4.2 80 90-169 791-880 (2131)
98 KOG0782 Predicted diacylglycer 97.7 6.5E-05 1.4E-09 67.4 5.6 73 94-166 904-987 (1004)
99 PF13606 Ank_3: Ankyrin repeat 97.5 0.00018 3.9E-09 39.7 3.4 24 92-115 5-28 (30)
100 KOG0521 Putative GTPase activa 97.4 0.00015 3.3E-09 67.9 3.5 66 92-157 659-730 (785)
101 KOG0783 Uncharacterized conser 97.0 0.00035 7.7E-09 65.1 2.0 55 116-170 52-110 (1267)
102 PF00023 Ank: Ankyrin repeat H 97.0 0.0014 2.9E-08 36.6 3.6 24 92-115 5-28 (33)
103 smart00248 ANK ankyrin repeats 96.8 0.0024 5.3E-08 32.2 3.8 28 116-143 2-29 (30)
104 KOG0511 Ankyrin repeat protein 96.5 0.0036 7.9E-08 54.0 4.3 53 118-170 38-93 (516)
105 KOG0506 Glutaminase (contains 96.1 0.011 2.3E-07 52.4 5.3 74 96-169 476-562 (622)
106 KOG0782 Predicted diacylglycer 95.8 0.015 3.3E-07 52.6 5.1 79 87-169 868-957 (1004)
107 KOG0705 GTPase-activating prot 95.6 0.022 4.8E-07 51.5 5.3 52 93-144 665-722 (749)
108 KOG2384 Major histocompatibili 95.4 0.023 5E-07 44.9 4.1 46 95-140 18-70 (223)
109 KOG0520 Uncharacterized conser 94.9 0.015 3.2E-07 55.4 2.0 75 93-168 578-663 (975)
110 KOG0522 Ankyrin repeat protein 94.6 0.083 1.8E-06 47.3 5.8 45 94-138 60-110 (560)
111 KOG0818 GTPase-activating prot 94.5 0.066 1.4E-06 47.8 5.0 47 92-138 170-222 (669)
112 KOG3609 Receptor-activated Ca2 93.9 0.13 2.8E-06 48.4 5.7 50 96-145 95-160 (822)
113 KOG0521 Putative GTPase activa 93.8 0.037 8.1E-07 52.2 2.3 40 118-157 658-697 (785)
114 KOG3609 Receptor-activated Ca2 93.0 0.16 3.4E-06 47.8 4.9 73 95-168 68-153 (822)
115 KOG2384 Major histocompatibili 91.9 0.62 1.3E-05 37.0 6.2 54 116-169 12-69 (223)
116 smart00248 ANK ankyrin repeats 91.8 0.37 7.9E-06 23.5 3.5 23 93-115 6-28 (30)
117 PF06128 Shigella_OspC: Shigel 78.3 5.1 0.00011 32.8 5.0 43 128-170 229-278 (284)
118 KOG0520 Uncharacterized conser 77.1 1.5 3.2E-05 42.3 1.9 62 96-157 614-688 (975)
119 KOG2505 Ankyrin repeat protein 68.7 3.8 8.3E-05 36.9 2.3 33 92-124 433-471 (591)
120 PF03158 DUF249: Multigene fam 67.2 13 0.00028 29.3 4.7 43 119-167 146-188 (192)
121 PF03158 DUF249: Multigene fam 57.0 60 0.0013 25.6 6.8 44 84-131 74-119 (192)
122 PF06128 Shigella_OspC: Shigel 55.1 48 0.001 27.3 6.1 45 97-141 225-279 (284)
123 PF11929 DUF3447: Domain of un 54.8 28 0.00061 22.7 4.1 43 95-138 12-54 (76)
No 1
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.58 E-value=1.6e-14 Score=98.93 Aligned_cols=78 Identities=28% Similarity=0.388 Sum_probs=70.6
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC--CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHh
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP--VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILN 167 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~--~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~ 167 (173)
+++|+..|+++++++|++.+.++ ++||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+ +.+++++|.+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 80 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINLGNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLE 80 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTSSSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 45699999999999999999887 479999999999999999999999999999999999999997 3789999988
Q ss_pred hhh
Q 030701 168 FSV 170 (173)
Q Consensus 168 ~~~ 170 (173)
+..
T Consensus 81 ~g~ 83 (89)
T PF12796_consen 81 HGA 83 (89)
T ss_dssp TTT
T ss_pred cCC
Confidence 754
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.51 E-value=3.8e-14 Score=109.72 Aligned_cols=115 Identities=23% Similarity=0.265 Sum_probs=86.5
Q ss_pred cCccCccccCCCCcch--hhHHHhhcccCCCccccccccCCCCCCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHC-CCC
Q 030701 38 LKCFRPSRIGPSNGSR--AQCWFKFGKNGVDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQ-NIH 114 (173)
Q Consensus 38 ~~~~~~~~~~p~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~-Ga~ 114 (173)
|+..+|.|.+-+-+.. +..+.+ ..++ .-||+|...+.+++ +||..|+.++|+.|+.+ |++
T Consensus 36 qD~Rt~LHwa~S~g~~eiv~fLls--q~nv-----------~~ddkDdaGWtPlh----ia~s~g~~evVk~Ll~r~~ad 98 (226)
T KOG4412|consen 36 QDGRTPLHWACSFGHVEIVYFLLS--QPNV-----------KPDDKDDAGWTPLH----IAASNGNDEVVKELLNRSGAD 98 (226)
T ss_pred ccCCceeeeeeecCchhHHHHHHh--cCCC-----------CCCCccccCCchhh----hhhhcCcHHHHHHHhcCCCCC
Confidence 4566777777555544 333333 1111 12344444444444 59999999999999998 888
Q ss_pred C------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhh
Q 030701 115 P------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFS 169 (173)
Q Consensus 115 ~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~ 169 (173)
+ +.|+||+|+..|..+++++|++.||.++++|..|.||||-|+ +-+++++|..+.
T Consensus 99 vna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~ 162 (226)
T KOG4412|consen 99 VNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQG 162 (226)
T ss_pred cceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcC
Confidence 7 449999999999999999999999999999999999999987 367888887765
No 3
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.38 E-value=8e-13 Score=108.93 Aligned_cols=79 Identities=28% Similarity=0.346 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC-----C-CcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chH
Q 030701 90 FNYMGMLAVEGTYDKMEALLSQNIHP-----V-DILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEE 160 (173)
Q Consensus 90 ~~~~~~Aa~~G~~~~v~~LL~~Ga~~-----~-dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~e 160 (173)
|.++|.||+.||..+++.||.+|+.+ + |||||+|+.+||.++|+.|+...+|+|+.+..|.||||+|+ .++
T Consensus 35 fsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydq 114 (448)
T KOG0195|consen 35 FSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQ 114 (448)
T ss_pred cchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHH
Confidence 55666699999999999999999877 3 49999999999999999999999999999999999999998 355
Q ss_pred HHHHHHhh
Q 030701 161 IKDLILNF 168 (173)
Q Consensus 161 i~~lLl~~ 168 (173)
|.+-|+..
T Consensus 115 iaedli~~ 122 (448)
T KOG0195|consen 115 IAEDLISC 122 (448)
T ss_pred HHHHHHhc
Confidence 55555543
No 4
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.36 E-value=5.7e-13 Score=103.23 Aligned_cols=75 Identities=33% Similarity=0.399 Sum_probs=66.1
Q ss_pred HHHcCCHHHHHHHHHC-CCCC------CCcHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCchhhhcCc---hHHHHH
Q 030701 96 LAVEGTYDKMEALLSQ-NIHP------VDILLMLAASEGDKPKIEELLRA-GASYTVKDADGRTALERAPS---EEIKDL 164 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~-Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~-GAdi~~~d~~G~TpLh~A~~---~ei~~l 164 (173)
||..|+.+++.+|+++ +..+ +-||||+|++.|..++|+.|+.+ |+|+|++++.|.|+||+|+. -+|.++
T Consensus 45 a~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaql 124 (226)
T KOG4412|consen 45 ACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQL 124 (226)
T ss_pred eeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHH
Confidence 9999999999999964 3333 33999999999999999999977 99999999999999999984 689999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|++..+
T Consensus 125 Lle~ga 130 (226)
T KOG4412|consen 125 LLEKGA 130 (226)
T ss_pred HHhcCC
Confidence 988753
No 5
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.35 E-value=5.8e-13 Score=115.36 Aligned_cols=74 Identities=27% Similarity=0.395 Sum_probs=52.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
||..||+++|++|++.|+|+ +.|.||+||+.||.+++++|++.|||+|.++..|.|+||.++ +-+++++|+
T Consensus 124 ACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll 203 (615)
T KOG0508|consen 124 ACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLL 203 (615)
T ss_pred HHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHH
Confidence 77777777777777777766 447777777777777777777777777777777777777766 466777776
Q ss_pred hhh
Q 030701 167 NFS 169 (173)
Q Consensus 167 ~~~ 169 (173)
.++
T Consensus 204 ~~g 206 (615)
T KOG0508|consen 204 KHG 206 (615)
T ss_pred hCC
Confidence 654
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.33 E-value=4.7e-12 Score=105.22 Aligned_cols=77 Identities=10% Similarity=0.032 Sum_probs=66.7
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC-----CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCch-hhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP-----VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTA-LERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~-----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~Tp-Lh~A~---~~ei~~l 164 (173)
++|+..|+.+++++|++.+.+. +.||||+|+..|+.+++++|+++||+++.+|..|.|| ||+|+ +.+++++
T Consensus 133 ~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~l 212 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQA 212 (284)
T ss_pred HHHHHcCCHHHHHHHHhcCCcccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHH
Confidence 3499999999999999987544 4599999999999999999999999999999999987 99987 4789999
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+.+.+
T Consensus 213 Ll~~Ga 218 (284)
T PHA02791 213 LFKYDI 218 (284)
T ss_pred HHHCCC
Confidence 988764
No 7
>PHA02791 ankyrin-like protein; Provisional
Probab=99.33 E-value=4e-12 Score=105.70 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=45.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCC-chhhhcC---chHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGR-TALERAP---SEEIKD 163 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~-TpLh~A~---~~ei~~ 163 (173)
|+|+..|+.++++.|+..|+++ +.||||+|+..|+.+++++|+..|++++.++..|. ||||+|+ +.++++
T Consensus 66 h~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk 145 (284)
T PHA02791 66 HQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVS 145 (284)
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHH
Confidence 3466666666666666666554 33666666666666666666666666666665553 5666664 245566
Q ss_pred HHHhh
Q 030701 164 LILNF 168 (173)
Q Consensus 164 lLl~~ 168 (173)
+|++.
T Consensus 146 ~LL~~ 150 (284)
T PHA02791 146 YFLSE 150 (284)
T ss_pred HHHhc
Confidence 65543
No 8
>PHA02741 hypothetical protein; Provisional
Probab=99.33 E-value=9.5e-12 Score=95.38 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=68.7
Q ss_pred HHHHHcCC----HHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCchhhhcC---c
Q 030701 94 GMLAVEGT----YDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLR-AGASYTVKDADGRTALERAP---S 158 (173)
Q Consensus 94 ~~Aa~~G~----~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~-~GAdi~~~d~~G~TpLh~A~---~ 158 (173)
|+|+..|+ .+++++|++.|+++ ++||||+|+..++.+++++|+. .|++++.+|.+|+||||+|. +
T Consensus 65 h~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 65 HIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNED 144 (169)
T ss_pred HHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCC
Confidence 35999999 58899999999987 4499999999999999999997 59999999999999999997 4
Q ss_pred hHHHHHHHhhhh
Q 030701 159 EEIKDLILNFSV 170 (173)
Q Consensus 159 ~ei~~lLl~~~~ 170 (173)
.+++++|+++..
T Consensus 145 ~~iv~~L~~~~~ 156 (169)
T PHA02741 145 VAMMQILREIVA 156 (169)
T ss_pred HHHHHHHHHHHH
Confidence 689999998864
No 9
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33 E-value=1.3e-12 Score=83.02 Aligned_cols=49 Identities=35% Similarity=0.392 Sum_probs=29.6
Q ss_pred HHHCC-CCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 108 LLSQN-IHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 108 LL~~G-a~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
||+.| .++ +.||||+|+..|+.+++++|++.|+|++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 45666 444 55999999999999999999999999999999999999987
No 10
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.30 E-value=9.1e-12 Score=95.45 Aligned_cols=79 Identities=20% Similarity=0.150 Sum_probs=68.2
Q ss_pred HHHHHHcCCHHH---HHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCchhhhcC---c
Q 030701 93 MGMLAVEGTYDK---MEALLSQNIHP-------VDILLMLAASEGDKPKIEELLR-AGASYTVKDADGRTALERAP---S 158 (173)
Q Consensus 93 ~~~Aa~~G~~~~---v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~-~GAdi~~~d~~G~TpLh~A~---~ 158 (173)
+|+|+..|+.+. +++|++.|+++ +.||||+|+..|+.+++++|+. .|++++.++..|.||||+|. +
T Consensus 61 Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 61 THMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred HHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCC
Confidence 334999988654 78999999887 3499999999999999999995 89999999999999999997 3
Q ss_pred hHHHHHHHhhhhc
Q 030701 159 EEIKDLILNFSVQ 171 (173)
Q Consensus 159 ~ei~~lLl~~~~~ 171 (173)
.+++++|+.+..+
T Consensus 141 ~~iv~~Ll~~ga~ 153 (166)
T PHA02743 141 RRMMEILRANGAV 153 (166)
T ss_pred HHHHHHHHHcCCC
Confidence 6899999887643
No 11
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.30 E-value=6.9e-12 Score=87.63 Aligned_cols=74 Identities=28% Similarity=0.387 Sum_probs=67.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--CC----cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP--VD----ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLI 165 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~--~d----TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lL 165 (173)
++|+||..|+++++++|+..|+++ .| |||..|.+.||.+||++||..|||-.++..+|.+.+..+.+++|.+||
T Consensus 37 plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eate~edIr~LL 116 (117)
T KOG4214|consen 37 PLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEATEEEDIRELL 116 (117)
T ss_pred cchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhccHHHHHHHh
Confidence 456699999999999999999998 23 999999999999999999999999999999999999988888888886
No 12
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.29 E-value=1.1e-11 Score=106.74 Aligned_cols=78 Identities=26% Similarity=0.271 Sum_probs=66.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.++++
T Consensus 106 L~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~ 185 (413)
T PHA02875 106 LHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICK 185 (413)
T ss_pred HHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 34499999999999999999887 448999999999999999999999999999999999999986 467888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++++
T Consensus 186 ~Ll~~ga 192 (413)
T PHA02875 186 MLLDSGA 192 (413)
T ss_pred HHHhCCC
Confidence 8877653
No 13
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.29 E-value=4.7e-12 Score=112.56 Aligned_cols=71 Identities=28% Similarity=0.284 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC----CC---cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 84 DDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP----VD---ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 84 ~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~----~d---TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
+....++. ||-+++++++++||++|+++ |+ ||||+|+..|+..+|.+|+++|||++.+|.+|.+|+|+|
T Consensus 77 ~g~tlLHW----AAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla 152 (600)
T KOG0509|consen 77 EGVTLLHW----AAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLA 152 (600)
T ss_pred CCccceeH----HHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHH
Confidence 44444554 99999999999999999998 23 999999999999999999999999999999999999999
Q ss_pred Cc
Q 030701 157 PS 158 (173)
Q Consensus 157 ~~ 158 (173)
+.
T Consensus 153 ~~ 154 (600)
T KOG0509|consen 153 AQ 154 (600)
T ss_pred HH
Confidence 74
No 14
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.28 E-value=5.9e-12 Score=94.73 Aligned_cols=79 Identities=13% Similarity=0.089 Sum_probs=68.5
Q ss_pred HHHHHHcCCHH---HHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHH-cCCCcccccCCCCchhhhcC---c
Q 030701 93 MGMLAVEGTYD---KMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLR-AGASYTVKDADGRTALERAP---S 158 (173)
Q Consensus 93 ~~~Aa~~G~~~---~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~-~GAdi~~~d~~G~TpLh~A~---~ 158 (173)
+|+|+..|+.+ ++++|++.|+++ ++||||+|+..|+.+++++|+. .|++++.+|..|.||||+|. +
T Consensus 59 Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 59 VHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHD 138 (154)
T ss_pred EEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCC
Confidence 34599999874 688999999987 3499999999999999999997 59999999999999999997 3
Q ss_pred hHHHHHHHhhhhc
Q 030701 159 EEIKDLILNFSVQ 171 (173)
Q Consensus 159 ~ei~~lLl~~~~~ 171 (173)
.+++++|+.+..+
T Consensus 139 ~~i~~~Ll~~ga~ 151 (154)
T PHA02736 139 AKMMNILRAKGAQ 151 (154)
T ss_pred HHHHHHHHHcCCC
Confidence 7899999887654
No 15
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.27 E-value=1.7e-11 Score=107.78 Aligned_cols=79 Identities=27% Similarity=0.253 Sum_probs=68.0
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC----chHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP----SEEI 161 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~----~~ei 161 (173)
++|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+ +.++
T Consensus 171 pLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~i 250 (477)
T PHA02878 171 ALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDI 250 (477)
T ss_pred HHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHH
Confidence 345599999999999999999887 459999999999999999999999999999999999999986 2578
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
+++|++.++
T Consensus 251 v~~Ll~~ga 259 (477)
T PHA02878 251 LKLLLEHGV 259 (477)
T ss_pred HHHHHHcCC
Confidence 888887653
No 16
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.24 E-value=3.6e-11 Score=100.65 Aligned_cols=66 Identities=20% Similarity=0.085 Sum_probs=60.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
++|+|+..|+.+++++|++.|+++ +.||||+|+..++.+++++|+..|++++.+|.+|.||||+|.
T Consensus 73 pLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~ 145 (300)
T PHA02884 73 PLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELAL 145 (300)
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 334599999999999999999988 339999999999999999999999999999999999999985
No 17
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.24 E-value=3.1e-11 Score=112.89 Aligned_cols=80 Identities=28% Similarity=0.384 Sum_probs=70.8
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC-
Q 030701 85 DVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP- 157 (173)
Q Consensus 85 ~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~- 157 (173)
....++. ||..|+.+.++.|++.|+++ +.||||+|+..|+.+++++|+++|+|++.+|.+|.||||+|+
T Consensus 525 ~~~~L~~----Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~ 600 (823)
T PLN03192 525 MASNLLT----VASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS 600 (823)
T ss_pred chhHHHH----HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence 3455666 99999999999999999988 459999999999999999999999999999999999999986
Q ss_pred --chHHHHHHHhh
Q 030701 158 --SEEIKDLILNF 168 (173)
Q Consensus 158 --~~ei~~lLl~~ 168 (173)
+.+++++|..+
T Consensus 601 ~g~~~iv~~L~~~ 613 (823)
T PLN03192 601 AKHHKIFRILYHF 613 (823)
T ss_pred hCCHHHHHHHHhc
Confidence 46777777654
No 18
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.22 E-value=3.7e-11 Score=92.76 Aligned_cols=64 Identities=22% Similarity=0.101 Sum_probs=55.1
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|.|+++||+++++.|+..|+++ |-||||-||.=.+.+|+.+||.+|||+|+......||||+|+
T Consensus 102 HRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa 171 (228)
T KOG0512|consen 102 HRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAA 171 (228)
T ss_pred HHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhh
Confidence 3489999999999998888887 448999888888888999999999999988888889999887
No 19
>PHA02795 ankyrin-like protein; Provisional
Probab=99.22 E-value=2.7e-11 Score=105.74 Aligned_cols=76 Identities=18% Similarity=0.118 Sum_probs=68.7
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---------
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS--------- 158 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~--------- 158 (173)
++++..++.+++++|++.|+++ +.||||+|+..|+.+++++|++.||+++.+|..|.||||+|+.
T Consensus 193 ~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~ 272 (437)
T PHA02795 193 FLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRE 272 (437)
T ss_pred HHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccc
Confidence 4588999999999999999998 4499999999999999999999999999999999999999962
Q ss_pred --hHHHHHHHhhh
Q 030701 159 --EEIKDLILNFS 169 (173)
Q Consensus 159 --~ei~~lLl~~~ 169 (173)
.+++++|++..
T Consensus 273 ~~~eIvelLL~~g 285 (437)
T PHA02795 273 THLKILEILLREP 285 (437)
T ss_pred cHHHHHHHHHhCC
Confidence 37899988754
No 20
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.22 E-value=5.6e-11 Score=99.51 Aligned_cols=75 Identities=17% Similarity=0.146 Sum_probs=67.3
Q ss_pred HHHcCCHHHHHHHHHCCCCC--C--------CcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhhcC---chHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP--V--------DILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALERAP---SEEI 161 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~--~--------dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~A~---~~ei 161 (173)
|+..|+.++++.|++.|+++ . .||||+|+..++.+++++|+++|||++.++ ..|.||||.|+ ..++
T Consensus 40 A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~ei 119 (300)
T PHA02884 40 SIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKC 119 (300)
T ss_pred HHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHH
Confidence 88889999999999999987 2 299999999999999999999999999864 57999999996 4789
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
+++|+.+++
T Consensus 120 vklLL~~GA 128 (300)
T PHA02884 120 LEILLSYGA 128 (300)
T ss_pred HHHHHHCCC
Confidence 999988764
No 21
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.21 E-value=5.7e-11 Score=103.22 Aligned_cols=78 Identities=19% Similarity=0.218 Sum_probs=68.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++..+..|.||||+|+ +.++++
T Consensus 128 Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~ 207 (434)
T PHA02874 128 LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIK 207 (434)
T ss_pred HHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence 34499999999999999999887 449999999999999999999999999999999999999997 468888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++..
T Consensus 208 ~Ll~~g~ 214 (434)
T PHA02874 208 LLIDHGN 214 (434)
T ss_pred HHHhCCC
Confidence 8887653
No 22
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.21 E-value=4.1e-11 Score=83.78 Aligned_cols=78 Identities=23% Similarity=0.256 Sum_probs=71.8
Q ss_pred HHHcCCHHHHHHHHHCCCCC-----CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHh
Q 030701 96 LAVEGTYDKMEALLSQNIHP-----VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILN 167 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~-----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~ 167 (173)
+.++|.++-|+..+..|.++ +.+|||+|+-.|..+++++|+..||+++.+|++|-|||-.|. ...++++|+.
T Consensus 9 ~vkNG~~DeVk~~v~~g~nVn~~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~ 88 (117)
T KOG4214|consen 9 NVKNGEIDEVKQSVNEGLNVNEIYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQ 88 (117)
T ss_pred hhccCcHHHHHHHHHccccHHHHhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHH
Confidence 88999999999999999877 559999999999999999999999999999999999999886 5789999999
Q ss_pred hhhccC
Q 030701 168 FSVQKA 173 (173)
Q Consensus 168 ~~~~~~ 173 (173)
.++.|+
T Consensus 89 ~GAdrt 94 (117)
T KOG4214|consen 89 NGADRT 94 (117)
T ss_pred cCcccc
Confidence 887664
No 23
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.20 E-value=2.5e-11 Score=105.34 Aligned_cols=120 Identities=18% Similarity=0.252 Sum_probs=91.3
Q ss_pred CccccCCCCcch--hhHHHhhcccCCCccccccccCCCCCCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC----
Q 030701 42 RPSRIGPSNGSR--AQCWFKFGKNGVDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP---- 115 (173)
Q Consensus 42 ~~~~~~p~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~---- 115 (173)
+|.-++..||.. ++.+...- +++.+..|.+ .-|....++..+++- |+..||+++|+.|++.|+++
T Consensus 44 tPL~iaaRnGH~~vVeyLle~~--~a~~e~~GsV---~FDge~IegappLWa----AsaAGHl~vVk~L~~~ga~VN~tT 114 (615)
T KOG0508|consen 44 TPLLIAARNGHADVVEYLLEHC--RASPEQGGSV---RFDGETIEGAPPLWA----ASAAGHLEVVKLLLRRGASVNDTT 114 (615)
T ss_pred CceeeehhcCcHHHHHHHHHHh--cCCccCCceE---EeCCcccCCCchhhH----HhccCcHHHHHHHHHhcCcccccc
Confidence 555555556654 45555422 3445444422 223344455555666 99999999999999999988
Q ss_pred -CC-cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 116 -VD-ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 116 -~d-TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
.+ |||..||.-||.++|++|+++|||+++.|+.|+|.|++|+ +.+|.++|+++.+
T Consensus 115 ~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA 174 (615)
T KOG0508|consen 115 RTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA 174 (615)
T ss_pred ccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCC
Confidence 22 9999999999999999999999999999999999999997 4789999988764
No 24
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.20 E-value=8.3e-11 Score=93.32 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=35.4
Q ss_pred CHHHHHHHHHCCCCC------CCcHHHHHHH--cCCHHHHHHHHHcCCCcccccCCCCchhhhc-C---chHHHHHHHhh
Q 030701 101 TYDKMEALLSQNIHP------VDILLMLAAS--EGDKPKIEELLRAGASYTVKDADGRTALERA-P---SEEIKDLILNF 168 (173)
Q Consensus 101 ~~~~v~~LL~~Ga~~------~dTpLh~Aa~--~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A-~---~~ei~~lLl~~ 168 (173)
+.+++++|++.|+++ +.||||+|+. .++.+++++|++.|++++.+|.+|.||||.+ . +.+++++|+++
T Consensus 102 ~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~ 181 (209)
T PHA02859 102 EPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSL 181 (209)
T ss_pred cHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHc
Confidence 455555555555554 2355555543 2455555555555555555555555555532 1 24555555544
No 25
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.19 E-value=7.6e-11 Score=101.44 Aligned_cols=76 Identities=20% Similarity=0.153 Sum_probs=68.9
Q ss_pred HHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
.|+..|+.+.++.|++.|... +.||||+|+..|+.+++++|++.|+|++..+.+|.||||+|+ +.+++++
T Consensus 74 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~ 153 (413)
T PHA02875 74 DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIEL 153 (413)
T ss_pred HHHHCCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHH
Confidence 499999999999999998754 459999999999999999999999999999999999999997 4788898
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++..
T Consensus 154 Ll~~g~ 159 (413)
T PHA02875 154 LIDHKA 159 (413)
T ss_pred HHhcCC
Confidence 887654
No 26
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.19 E-value=4e-11 Score=106.68 Aligned_cols=77 Identities=30% Similarity=0.392 Sum_probs=67.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC--CC----cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP--VD----ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~--~d----TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~ 163 (173)
+|.||++|++.+|+.|++.|+++ .| +|||+|+..|+.-.|-+||..|+|++.+|.+|+||||+|+. ...+.
T Consensus 116 LHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~ 195 (600)
T KOG0509|consen 116 LHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVR 195 (600)
T ss_pred chHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHH
Confidence 44499999999999999999999 33 99999999999999999999999999999999999999983 22266
Q ss_pred HHHhhh
Q 030701 164 LILNFS 169 (173)
Q Consensus 164 lLl~~~ 169 (173)
+|+.+.
T Consensus 196 ~LL~f~ 201 (600)
T KOG0509|consen 196 RLLKFG 201 (600)
T ss_pred HHHHhc
Confidence 666654
No 27
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.18 E-value=8.6e-11 Score=102.66 Aligned_cols=80 Identities=24% Similarity=0.184 Sum_probs=71.7
Q ss_pred HHHHHHHHcCC--HHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---ch
Q 030701 91 NYMGMLAVEGT--YDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SE 159 (173)
Q Consensus 91 ~~~~~Aa~~G~--~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ 159 (173)
.+++.|+..|+ .+++++|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|..|.||+|+|. +.
T Consensus 217 t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~ 296 (480)
T PHA03100 217 TPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNK 296 (480)
T ss_pred hHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCH
Confidence 34556999999 99999999999987 559999999999999999999999999999999999999997 47
Q ss_pred HHHHHHHhhhh
Q 030701 160 EIKDLILNFSV 170 (173)
Q Consensus 160 ei~~lLl~~~~ 170 (173)
+++++|++++.
T Consensus 297 ~iv~~Ll~~g~ 307 (480)
T PHA03100 297 EIFKLLLNNGP 307 (480)
T ss_pred HHHHHHHhcCC
Confidence 88888887653
No 28
>PHA02741 hypothetical protein; Provisional
Probab=99.18 E-value=8.5e-11 Score=90.10 Aligned_cols=74 Identities=19% Similarity=0.300 Sum_probs=62.5
Q ss_pred HHHHHcCCHHHHHHHHH------CCCCC------CCcHHHHHHHcCC----HHHHHHHHHcCCCcccccC-CCCchhhhc
Q 030701 94 GMLAVEGTYDKMEALLS------QNIHP------VDILLMLAASEGD----KPKIEELLRAGASYTVKDA-DGRTALERA 156 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~------~Ga~~------~dTpLh~Aa~~g~----~~~v~~LL~~GAdi~~~d~-~G~TpLh~A 156 (173)
|+|+..|+.++++.|+. .|+++ +.||||+|+..|+ .+++++|+..|++++.++. +|.||||+|
T Consensus 26 h~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A 105 (169)
T PHA02741 26 HEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLA 105 (169)
T ss_pred HHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHH
Confidence 34999999999998853 24444 5599999999998 5889999999999999985 899999999
Q ss_pred C---chHHHHHHHh
Q 030701 157 P---SEEIKDLILN 167 (173)
Q Consensus 157 ~---~~ei~~lLl~ 167 (173)
+ +.+++++|+.
T Consensus 106 ~~~~~~~iv~~Ll~ 119 (169)
T PHA02741 106 AHRRDHDLAEWLCC 119 (169)
T ss_pred HHcCCHHHHHHHHh
Confidence 7 3688888875
No 29
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.18 E-value=4.7e-11 Score=104.72 Aligned_cols=79 Identities=23% Similarity=0.278 Sum_probs=68.1
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc--
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS-- 158 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~-- 158 (173)
.-|++ |+..|.+|+|+..+..-.|+ |-|+||-|++.||.++|+||+++|+++|..|.+||||||+|+.
T Consensus 552 aLLLD----aaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCN 627 (752)
T KOG0515|consen 552 ALLLD----AALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCN 627 (752)
T ss_pred HHHHh----hhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcC
Confidence 34677 99999999999999887777 3399999999999999999999999999999999999999983
Q ss_pred -hHHHHHHHhhh
Q 030701 159 -EEIKDLILNFS 169 (173)
Q Consensus 159 -~ei~~lLl~~~ 169 (173)
..+++.|.+.+
T Consensus 628 nv~~ckqLVe~G 639 (752)
T KOG0515|consen 628 NVPMCKQLVESG 639 (752)
T ss_pred chHHHHHHHhcc
Confidence 45555555543
No 30
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.17 E-value=1.8e-10 Score=105.63 Aligned_cols=76 Identities=30% Similarity=0.362 Sum_probs=69.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
++.|+..|+.+.++.|++.|+++ +.||||+|+..|+.+++++|++.|+|++.+|.+|.||||+|+ +.++++
T Consensus 86 L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~ 165 (664)
T PTZ00322 86 LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQ 165 (664)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHH
Confidence 33499999999999999999988 459999999999999999999999999999999999999997 378999
Q ss_pred HHHhh
Q 030701 164 LILNF 168 (173)
Q Consensus 164 lLl~~ 168 (173)
+|+.+
T Consensus 166 ~Ll~~ 170 (664)
T PTZ00322 166 LLSRH 170 (664)
T ss_pred HHHhC
Confidence 99877
No 31
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.17 E-value=9.5e-11 Score=93.00 Aligned_cols=78 Identities=17% Similarity=0.121 Sum_probs=63.5
Q ss_pred HHHHHHc--CCHHHHHHHHHCCCCC-------CCcHHHHHHHc---CCHHHHHHHHHcCCCcccccCCCCchhhhcC---
Q 030701 93 MGMLAVE--GTYDKMEALLSQNIHP-------VDILLMLAASE---GDKPKIEELLRAGASYTVKDADGRTALERAP--- 157 (173)
Q Consensus 93 ~~~Aa~~--G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~---g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~--- 157 (173)
+|+|+.. |+.+++++|++.|+++ +.||||+|+.. ++.+++++|+++|+|++.+|.+|.||||+|.
T Consensus 55 Lh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~ 134 (209)
T PHA02859 55 IFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNF 134 (209)
T ss_pred HHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhc
Confidence 3348765 4899999999999988 22899998763 4789999999999999999999999999874
Q ss_pred --chHHHHHHHhhhh
Q 030701 158 --SEEIKDLILNFSV 170 (173)
Q Consensus 158 --~~ei~~lLl~~~~ 170 (173)
+.+++++|+++..
T Consensus 135 ~~~~~iv~~Li~~ga 149 (209)
T PHA02859 135 NVRINVIKLLIDSGV 149 (209)
T ss_pred cCCHHHHHHHHHcCC
Confidence 2578888887654
No 32
>PHA02946 ankyin-like protein; Provisional
Probab=99.16 E-value=1.1e-10 Score=102.47 Aligned_cols=56 Identities=23% Similarity=0.227 Sum_probs=27.2
Q ss_pred CHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 101 TYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 101 ~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
+.++++.|++.|+++ +.||||+|+..|+.+++++|+++|||++.+|.+|.||||+|
T Consensus 51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A 112 (446)
T PHA02946 51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYL 112 (446)
T ss_pred CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHH
Confidence 344455555554444 22455555555555555555555555555455555555543
No 33
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.15 E-value=1.4e-10 Score=89.56 Aligned_cols=75 Identities=28% Similarity=0.315 Sum_probs=68.9
Q ss_pred HHHcCCHHHHHHHHHCCCCC---CC----cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP---VD----ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~---~d----TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lL 165 (173)
|+..+.+..|+.||+..++. .| ||||-|++.||.++|+.|+..||+++.+...|+||||.|+ +-+|.-+|
T Consensus 70 aae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~L 149 (228)
T KOG0512|consen 70 AAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRL 149 (228)
T ss_pred HHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHH
Confidence 99999999999999998876 22 9999999999999999999999999999999999999998 47899999
Q ss_pred Hhhhh
Q 030701 166 LNFSV 170 (173)
Q Consensus 166 l~~~~ 170 (173)
+.+.+
T Consensus 150 Lqhga 154 (228)
T KOG0512|consen 150 LQHGA 154 (228)
T ss_pred HhccC
Confidence 88764
No 34
>PHA03095 ankyrin-like protein; Provisional
Probab=99.15 E-value=1.5e-10 Score=100.81 Aligned_cols=74 Identities=24% Similarity=0.182 Sum_probs=53.0
Q ss_pred HHHcC---CHHHHHHHHHCCCCC------CCcHHHHHHHcC-CHHHHHHHHHcCCCcccccCCCCchhhhcC-----chH
Q 030701 96 LAVEG---TYDKMEALLSQNIHP------VDILLMLAASEG-DKPKIEELLRAGASYTVKDADGRTALERAP-----SEE 160 (173)
Q Consensus 96 Aa~~G---~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g-~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~-----~~e 160 (173)
|+..| +.++++.|++.|+++ +.||||+|+..| +.+++++|++.|++++.++..|.||||+|. +.+
T Consensus 54 a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~ 133 (471)
T PHA03095 54 YLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPK 133 (471)
T ss_pred HHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHH
Confidence 66666 777777777777776 347777777777 477777777777777777777777777775 246
Q ss_pred HHHHHHhhh
Q 030701 161 IKDLILNFS 169 (173)
Q Consensus 161 i~~lLl~~~ 169 (173)
++++|++++
T Consensus 134 iv~~Ll~~g 142 (471)
T PHA03095 134 VIRLLLRKG 142 (471)
T ss_pred HHHHHHHcC
Confidence 677766554
No 35
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.14 E-value=1.9e-10 Score=101.09 Aligned_cols=78 Identities=19% Similarity=0.176 Sum_probs=67.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHc-CCHHHHHHHHHcCCCcccccC-CCCchhhhcCc-hHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASE-GDKPKIEELLRAGASYTVKDA-DGRTALERAPS-EEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~-g~~~~v~~LL~~GAdi~~~d~-~G~TpLh~A~~-~ei~~ 163 (173)
+|+|+..|+.++++.|++.|+++ +.||||+|+.. ++.+++++|+++|++++.++. .|.||||+|.. .++++
T Consensus 205 Lh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~~~~~~v~ 284 (477)
T PHA02878 205 LHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSERKLK 284 (477)
T ss_pred HHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHHccCHHHHH
Confidence 44599999999999999999988 45999999975 689999999999999999886 79999999963 67888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|+++++
T Consensus 285 ~Ll~~ga 291 (477)
T PHA02878 285 LLLEYGA 291 (477)
T ss_pred HHHHCCC
Confidence 8887764
No 36
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.13 E-value=1e-10 Score=73.37 Aligned_cols=51 Identities=33% Similarity=0.430 Sum_probs=39.1
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHH
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLIL 166 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl 166 (173)
+.||||+|+..|+.+++++|++.|+|++.+|.+|.||||+|+ +.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 458999999999999999999999999999999999999987 367777764
No 37
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.11 E-value=2.3e-10 Score=107.06 Aligned_cols=79 Identities=25% Similarity=0.280 Sum_probs=64.0
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHH-------------------------------HHcCCHHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLA-------------------------------ASEGDKPKIEE 134 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~A-------------------------------a~~g~~~~v~~ 134 (173)
++|+||..|+.++++.|++.|+++ ++||||+| +..|+.++++.
T Consensus 561 pLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~~~L~~Aa~~g~~~~v~~ 640 (823)
T PLN03192 561 PLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKE 640 (823)
T ss_pred HHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCchHHHHHHHhCCHHHHHH
Confidence 344599999999999999999887 44887755 45555666777
Q ss_pred HHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 135 LLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 135 LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
|+++|+|+|.+|.+|.||||+|+ +.+++++|+++++
T Consensus 641 Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GA 679 (823)
T PLN03192 641 LLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGA 679 (823)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCC
Confidence 88999999999999999999997 4789999987654
No 38
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.10 E-value=2.5e-10 Score=99.68 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=68.6
Q ss_pred HHHHH--HcCCHHHHHHHHHCCCCC------CCcHHHHHHHcC--CHHHHHHHHHcCCCcccccCCCCchhhhcC---ch
Q 030701 93 MGMLA--VEGTYDKMEALLSQNIHP------VDILLMLAASEG--DKPKIEELLRAGASYTVKDADGRTALERAP---SE 159 (173)
Q Consensus 93 ~~~Aa--~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g--~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ 159 (173)
+++|+ ..|+.+++++|++.|+++ +.||||+|+..| +.+++++|++.|++++.++..|.||||+|. +.
T Consensus 110 L~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~ 189 (480)
T PHA03100 110 LLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNI 189 (480)
T ss_pred hhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCH
Confidence 34499 999999999999999887 459999999999 999999999999999999999999999997 47
Q ss_pred HHHHHHHhhhh
Q 030701 160 EIKDLILNFSV 170 (173)
Q Consensus 160 ei~~lLl~~~~ 170 (173)
+++++|+++++
T Consensus 190 ~iv~~Ll~~ga 200 (480)
T PHA03100 190 DVIKFLLDNGA 200 (480)
T ss_pred HHHHHHHHcCC
Confidence 88888887654
No 39
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.10 E-value=1.7e-10 Score=92.11 Aligned_cols=79 Identities=25% Similarity=0.239 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc--
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS-- 158 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~-- 158 (173)
++|.+ |+..||..+|++|+..|+++ ..++|.+|+..|..++|++||.++.|+|.-|-+|-|||-+|+.
T Consensus 162 TpLiW----Aaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgn 237 (296)
T KOG0502|consen 162 TPLIW----AAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGN 237 (296)
T ss_pred hHhHH----HHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCC
Confidence 44555 99999999999999999998 3399999999999999999999999999999999999999984
Q ss_pred -hHHHHHHHhhh
Q 030701 159 -EEIKDLILNFS 169 (173)
Q Consensus 159 -~ei~~lLl~~~ 169 (173)
.+|++.|++.+
T Consensus 238 hvkcve~Ll~sG 249 (296)
T KOG0502|consen 238 HVKCVESLLNSG 249 (296)
T ss_pred hHHHHHHHHhcC
Confidence 57788877654
No 40
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.08 E-value=1.8e-10 Score=109.33 Aligned_cols=75 Identities=28% Similarity=0.249 Sum_probs=56.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIK 162 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~ 162 (173)
++|+|+..|+.++|++||++|+++ +.||||.||..|+.+|+++|+++||++|..|.+|.|||++|.. ..++
T Consensus 543 pLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~ 622 (1143)
T KOG4177|consen 543 PLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVV 622 (1143)
T ss_pred hHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchh
Confidence 556688888888888888888777 3388888888888888888888888888888888888888763 3455
Q ss_pred HHHH
Q 030701 163 DLIL 166 (173)
Q Consensus 163 ~lLl 166 (173)
++|+
T Consensus 623 k~l~ 626 (1143)
T KOG4177|consen 623 KLLK 626 (1143)
T ss_pred hHHH
Confidence 5544
No 41
>PHA03095 ankyrin-like protein; Provisional
Probab=99.08 E-value=4.1e-10 Score=98.03 Aligned_cols=84 Identities=20% Similarity=0.192 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcC---CHHHHHHHHHcCCCcccccCCCCchhhhc
Q 030701 86 VEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEG---DKPKIEELLRAGASYTVKDADGRTALERA 156 (173)
Q Consensus 86 ~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g---~~~~v~~LL~~GAdi~~~d~~G~TpLh~A 156 (173)
...++.| -.++..++.++|+.|++.|+++ +.||||+|+..+ +.+++++|++.|+|++.++..|.||||+|
T Consensus 12 ~~~l~~~-~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A 90 (471)
T PHA03095 12 EAALYDY-LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLY 90 (471)
T ss_pred HHHHHHH-HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 3446665 4488899999999999999988 459999999988 99999999999999999999999999999
Q ss_pred C----chHHHHHHHhhhh
Q 030701 157 P----SEEIKDLILNFSV 170 (173)
Q Consensus 157 ~----~~ei~~lLl~~~~ 170 (173)
+ ..+++++|++++.
T Consensus 91 ~~~~~~~~iv~lLl~~ga 108 (471)
T PHA03095 91 LYNATTLDVIKLLIKAGA 108 (471)
T ss_pred HHcCCcHHHHHHHHHcCC
Confidence 7 3688999987754
No 42
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.07 E-value=5e-10 Score=76.41 Aligned_cols=53 Identities=23% Similarity=0.316 Sum_probs=47.6
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD 146 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d 146 (173)
++|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+++|++++.+|
T Consensus 31 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 31 HYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp HHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred HHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 3499999999999999999998 4499999999999999999999999999875
No 43
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.06 E-value=1.5e-10 Score=97.79 Aligned_cols=76 Identities=32% Similarity=0.449 Sum_probs=62.6
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC---------------------------------------------CCcHHHHHHHcC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP---------------------------------------------VDILLMLAASEG 127 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~---------------------------------------------~dTpLh~Aa~~g 127 (173)
||++..+++.++|+.||+.|... +.|+|++|..+|
T Consensus 272 LHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHG 351 (452)
T KOG0514|consen 272 LHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQHGQTALMLAVSHG 351 (452)
T ss_pred eeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcC
Confidence 46788888888888888776432 118999999999
Q ss_pred CHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhh
Q 030701 128 DKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNF 168 (173)
Q Consensus 128 ~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~ 168 (173)
..++|+.||.+|||+|+.|.+|.|+|++|+ ++||+++|+..
T Consensus 352 r~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~ 395 (452)
T KOG0514|consen 352 RVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV 395 (452)
T ss_pred cHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc
Confidence 999999999999999999999999999997 37888888753
No 44
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.06 E-value=3.6e-10 Score=86.53 Aligned_cols=76 Identities=16% Similarity=0.188 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHcCCH----HHHHHHHHCCCCC------CCcHHHHHHHcCCHHH---HHHHHHcCCCccccc-CCCCchh
Q 030701 88 QYFNYMGMLAVEGTY----DKMEALLSQNIHP------VDILLMLAASEGDKPK---IEELLRAGASYTVKD-ADGRTAL 153 (173)
Q Consensus 88 ~l~~~~~~Aa~~G~~----~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~---v~~LL~~GAdi~~~d-~~G~TpL 153 (173)
.++. ||..|++ +++++|++.|+.+ +.||||+|+..|+.+. +++|+..|++++.++ ..|.|||
T Consensus 23 ~l~~----a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL 98 (166)
T PHA02743 23 TFLR----ICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL 98 (166)
T ss_pred HHHH----HHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence 3666 9999998 5566777888665 4599999999988654 799999999999998 5899999
Q ss_pred hhcC---chHHHHHHHh
Q 030701 154 ERAP---SEEIKDLILN 167 (173)
Q Consensus 154 h~A~---~~ei~~lLl~ 167 (173)
|+|+ +.+++++|+.
T Consensus 99 h~A~~~g~~~iv~~Ll~ 115 (166)
T PHA02743 99 HIAASTKNYELAEWLCR 115 (166)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 9997 4678888874
No 45
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.04 E-value=2.8e-10 Score=108.01 Aligned_cols=82 Identities=26% Similarity=0.278 Sum_probs=73.0
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---h
Q 030701 89 YFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---E 159 (173)
Q Consensus 89 l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ 159 (173)
.+..+|+++..++...++.+++.|+++ +.||||.|+..|+..+|++||++|||++.+++.|+||||.|+. .
T Consensus 507 ~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~ 586 (1143)
T KOG4177|consen 507 GLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHN 586 (1143)
T ss_pred ccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChH
Confidence 455577788888888889899888887 3399999999999999999999999999999999999999983 7
Q ss_pred HHHHHHHhhhh
Q 030701 160 EIKDLILNFSV 170 (173)
Q Consensus 160 ei~~lLl~~~~ 170 (173)
+|+.+|.+++.
T Consensus 587 ~i~~LLlk~GA 597 (1143)
T KOG4177|consen 587 DIAELLLKHGA 597 (1143)
T ss_pred HHHHHHHHcCC
Confidence 89999998875
No 46
>PHA02946 ankyin-like protein; Provisional
Probab=99.04 E-value=6.4e-10 Score=97.66 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=66.6
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhh
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNF 168 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~ 168 (173)
++|+|+..|+.++|++||+.|++ +.||||+|+..++.+++++|+.+|++++.+ .+|.||||+|. +.++++.|+..
T Consensus 300 pLh~Aa~~g~~eivk~Ll~~~~~-~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~ 377 (446)
T PHA02946 300 DFKMAVEVGSIRCVKYLLDNDII-CEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLH 377 (446)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCc-cccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhc
Confidence 45669999999999999999864 689999999999999999999999999985 68999999997 36788777764
No 47
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.03 E-value=1e-09 Score=95.32 Aligned_cols=66 Identities=24% Similarity=0.205 Sum_probs=51.9
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
++|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|++.|++++.++..|.||||.|.
T Consensus 160 pLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~ 231 (434)
T PHA02874 160 PIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAI 231 (434)
T ss_pred HHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHH
Confidence 344599999999999999998876 459999999999999999999888776666555555555553
No 48
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.02 E-value=9.4e-10 Score=100.75 Aligned_cols=79 Identities=19% Similarity=0.214 Sum_probs=65.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCC-HHHHHHHHHcCCCcccccCCCCchhhhcCc----hH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGD-KPKIEELLRAGASYTVKDADGRTALERAPS----EE 160 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~-~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~----~e 160 (173)
++|+|+..|+.++++.|++.|+++ +.||||+|+..+. ..++++|++.|++++.+|.+|+||||+|+. .+
T Consensus 378 pLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~ 457 (682)
T PHA02876 378 PIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLD 457 (682)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHH
Confidence 455699999999999999999887 4499999887655 467888999999999999999999999862 57
Q ss_pred HHHHHHhhhh
Q 030701 161 IKDLILNFSV 170 (173)
Q Consensus 161 i~~lLl~~~~ 170 (173)
++++|+++++
T Consensus 458 iv~lLl~~Ga 467 (682)
T PHA02876 458 VIEMLLDNGA 467 (682)
T ss_pred HHHHHHHCCC
Confidence 8888887654
No 49
>PHA02798 ankyrin-like protein; Provisional
Probab=99.01 E-value=9.1e-10 Score=97.25 Aligned_cols=72 Identities=25% Similarity=0.246 Sum_probs=59.4
Q ss_pred cCCHHHHHHHHHCCCCC------CCcHHHHHHHcC---CHHHHHHHHHcCCCcccccCCCCchhhhcC---c---hHHHH
Q 030701 99 EGTYDKMEALLSQNIHP------VDILLMLAASEG---DKPKIEELLRAGASYTVKDADGRTALERAP---S---EEIKD 163 (173)
Q Consensus 99 ~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g---~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~---~ei~~ 163 (173)
.++.++++.|++.|+++ +.||||+|+..+ +.+++++|+++|||++.+|.+|.||||+|. . .++++
T Consensus 86 ~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~ 165 (489)
T PHA02798 86 KHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIK 165 (489)
T ss_pred HhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHH
Confidence 36789999999999887 459999998865 678999999999999999999999999875 2 57888
Q ss_pred HHHhhhh
Q 030701 164 LILNFSV 170 (173)
Q Consensus 164 lLl~~~~ 170 (173)
+|++.+.
T Consensus 166 ~Ll~~ga 172 (489)
T PHA02798 166 LLLEKGV 172 (489)
T ss_pred HHHHhCC
Confidence 8877643
No 50
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.97 E-value=2.2e-09 Score=90.92 Aligned_cols=74 Identities=30% Similarity=0.343 Sum_probs=64.9
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCchhhhcC---chHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELL-RAGASYTVKDADGRTALERAP---SEEIKD 163 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL-~~GAdi~~~d~~G~TpLh~A~---~~ei~~ 163 (173)
-+|..+|..++|+.||.+|+|+ |.|+|++||.+||.+++.+|| ..++|+...|.+|.|+|.+|- +.||.-
T Consensus 345 MLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~ 424 (452)
T KOG0514|consen 345 MLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAV 424 (452)
T ss_pred hhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHH
Confidence 3688999999999999999998 339999999999999999999 567999999999999999985 467776
Q ss_pred HHHh
Q 030701 164 LILN 167 (173)
Q Consensus 164 lLl~ 167 (173)
+|-.
T Consensus 425 mlYa 428 (452)
T KOG0514|consen 425 MLYA 428 (452)
T ss_pred HHHH
Confidence 6643
No 51
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.97 E-value=2e-09 Score=95.18 Aligned_cols=51 Identities=24% Similarity=0.277 Sum_probs=46.5
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhh
Q 030701 118 ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNF 168 (173)
Q Consensus 118 TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~ 168 (173)
||||+|+..|+.+++++|++.|||++.+|..|.||||+|. +.+++++|++.
T Consensus 258 TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~ 311 (494)
T PHA02989 258 NPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQL 311 (494)
T ss_pred CHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 9999999999999999999999999999999999999997 36777777654
No 52
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.96 E-value=2.1e-09 Score=99.55 Aligned_cols=69 Identities=16% Similarity=0.220 Sum_probs=58.7
Q ss_pred cCCHHHHHHHHHCCCCC------CCcHHHHHHHcCC--HHHHHHHHHcCCCcccccCCCCchhhhcC------chHHHHH
Q 030701 99 EGTYDKMEALLSQNIHP------VDILLMLAASEGD--KPKIEELLRAGASYTVKDADGRTALERAP------SEEIKDL 164 (173)
Q Consensus 99 ~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~--~~~v~~LL~~GAdi~~~d~~G~TpLh~A~------~~ei~~l 164 (173)
.++.+++++|++.|+++ +.||||+|+..|+ .++|++|+++|||++.+|..|.||||.|. ..+++++
T Consensus 189 ~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvki 268 (764)
T PHA02716 189 YVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNI 268 (764)
T ss_pred cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHH
Confidence 46889999999999988 4499999999985 48999999999999999999999999763 3566666
Q ss_pred HHh
Q 030701 165 ILN 167 (173)
Q Consensus 165 Ll~ 167 (173)
|++
T Consensus 269 Lie 271 (764)
T PHA02716 269 YIE 271 (764)
T ss_pred HHH
Confidence 654
No 53
>PHA02795 ankyrin-like protein; Provisional
Probab=98.96 E-value=1.3e-09 Score=95.28 Aligned_cols=80 Identities=20% Similarity=0.110 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC---C---------CcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhh
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP---V---------DILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALE 154 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~---~---------dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh 154 (173)
+.++. |+..|+.+++++|++.|++. . .|++|.++..++.+++++|+.+|||+|.+|.+|.||||
T Consensus 151 t~lh~----A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh 226 (437)
T PHA02795 151 NAYFR----GICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLY 226 (437)
T ss_pred CHHHH----HHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHH
Confidence 34555 99999999999999999854 2 16788899999999999999999999999999999999
Q ss_pred hcC---chHHHHHHHhhhh
Q 030701 155 RAP---SEEIKDLILNFSV 170 (173)
Q Consensus 155 ~A~---~~ei~~lLl~~~~ 170 (173)
+|+ +.+++++|+++++
T Consensus 227 ~Aa~~g~~eiVelLL~~GA 245 (437)
T PHA02795 227 RAIYAGYIDLVSWLLENGA 245 (437)
T ss_pred HHHHcCCHHHHHHHHHCCC
Confidence 997 4789999987764
No 54
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.96 E-value=1.3e-09 Score=90.19 Aligned_cols=65 Identities=26% Similarity=0.341 Sum_probs=60.9
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
+|+||.+||-++|..||+..+++ ++||||+||.-|.-.+.+-|+.+||-+++.+++|.|||+.|.
T Consensus 71 lhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldkak 141 (448)
T KOG0195|consen 71 LHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKAK 141 (448)
T ss_pred hhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhhc
Confidence 34599999999999999999888 779999999999999999999999999999999999999985
No 55
>PHA02989 ankyrin repeat protein; Provisional
Probab=98.95 E-value=2.6e-09 Score=94.48 Aligned_cols=71 Identities=17% Similarity=0.172 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHCCCCC------CCcHHHHHHHc---CCHHHHHHHHHcCCCc-ccccCCCCchhhhcC-----chHHHHH
Q 030701 100 GTYDKMEALLSQNIHP------VDILLMLAASE---GDKPKIEELLRAGASY-TVKDADGRTALERAP-----SEEIKDL 164 (173)
Q Consensus 100 G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~---g~~~~v~~LL~~GAdi-~~~d~~G~TpLh~A~-----~~ei~~l 164 (173)
|+.++++.|++.|+++ +.||||.|+.. ++.+++++|+++|||+ +.+|..|.||||+|. +.+++++
T Consensus 86 ~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~ 165 (494)
T PHA02989 86 KIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKI 165 (494)
T ss_pred hHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHH
Confidence 4467888888888877 44888877654 5678888888888888 778888888888763 3577788
Q ss_pred HHhhhh
Q 030701 165 ILNFSV 170 (173)
Q Consensus 165 Ll~~~~ 170 (173)
|+++++
T Consensus 166 Ll~~Ga 171 (494)
T PHA02989 166 LLSFGV 171 (494)
T ss_pred HHHcCC
Confidence 776654
No 56
>PHA02876 ankyrin repeat protein; Provisional
Probab=98.95 E-value=3.5e-09 Score=96.99 Aligned_cols=75 Identities=20% Similarity=0.140 Sum_probs=66.7
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~l 164 (173)
..+...|+.+++++|++.|+++ +.||||+|+..|+.++|++|++.||+++..+.+|.||||+|. +.+++++
T Consensus 150 ~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~ 229 (682)
T PHA02876 150 KERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKA 229 (682)
T ss_pred HHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHH
Confidence 3488999999999999999988 559999999999999999999999999999999999999997 3567776
Q ss_pred HHhh
Q 030701 165 ILNF 168 (173)
Q Consensus 165 Ll~~ 168 (173)
|++.
T Consensus 230 Ll~~ 233 (682)
T PHA02876 230 IIDN 233 (682)
T ss_pred HHhc
Confidence 6543
No 57
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.91 E-value=2.5e-09 Score=88.25 Aligned_cols=86 Identities=28% Similarity=0.265 Sum_probs=75.8
Q ss_pred ChhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCCC-------CcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhh
Q 030701 82 DRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPV-------DILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALE 154 (173)
Q Consensus 82 ~~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~~-------dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh 154 (173)
|..+...|-+ |+..|+++.|+.||+.|+|+. -||||+|+..|+.++.++|++.||.....|.-|+|+-.
T Consensus 42 D~sGMs~Lah----AaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaq 117 (396)
T KOG1710|consen 42 DPSGMSVLAH----AAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQ 117 (396)
T ss_pred CCCcccHHHH----HHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHH
Confidence 3455566888 999999999999999999992 29999999999999999999999999999999999999
Q ss_pred hcC---chHHHHHHHhhhhc
Q 030701 155 RAP---SEEIKDLILNFSVQ 171 (173)
Q Consensus 155 ~A~---~~ei~~lLl~~~~~ 171 (173)
.|+ +.+++.++.+|..+
T Consensus 118 mAAFVG~H~CV~iINN~~t~ 137 (396)
T KOG1710|consen 118 MAAFVGHHECVAIINNHITI 137 (396)
T ss_pred HHHHhcchHHHHHHhccccH
Confidence 886 68888888877643
No 58
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=98.91 E-value=4.1e-09 Score=97.62 Aligned_cols=76 Identities=14% Similarity=0.077 Sum_probs=66.1
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHH--cCCHHHHHHHHHcCCCcccccCCCCchhhhcC---------
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAAS--EGDKPKIEELLRAGASYTVKDADGRTALERAP--------- 157 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~--~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~--------- 157 (173)
.|+..|+.++++.|++.|+++ +.||||+|+. .++.+++++|++.|++++.+|..|+||||+|.
T Consensus 290 ~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~l 369 (764)
T PHA02716 290 TLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNIL 369 (764)
T ss_pred HHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccc
Confidence 378999999999999999987 4599999764 46889999999999999999999999999863
Q ss_pred --------chHHHHHHHhhhh
Q 030701 158 --------SEEIKDLILNFSV 170 (173)
Q Consensus 158 --------~~ei~~lLl~~~~ 170 (173)
+.+++++|+++++
T Consensus 370 d~~~~~~~~~eVVklLL~~GA 390 (764)
T PHA02716 370 DPETDNDIRLDVIQCLISLGA 390 (764)
T ss_pred cccccccChHHHHHHHHHCCC
Confidence 3588898887754
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=98.89 E-value=4.9e-09 Score=96.20 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=62.7
Q ss_pred HHHcCCHHHHHHHHHCCCCC--C------------------CcHHHHHHH-----------cCCHHHHHHHHHcCCCccc
Q 030701 96 LAVEGTYDKMEALLSQNIHP--V------------------DILLMLAAS-----------EGDKPKIEELLRAGASYTV 144 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~--~------------------dTpLh~Aa~-----------~g~~~~v~~LL~~GAdi~~ 144 (173)
++..|+.+++++||+.|+++ . .||||+|+. .++.+++++|+++|||++.
T Consensus 145 a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~ 224 (661)
T PHA02917 145 MTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS 224 (661)
T ss_pred HccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc
Confidence 34579999999999999987 1 299999986 4689999999999999999
Q ss_pred ccCCCCchhhhcCc-----hHHHHHHHh
Q 030701 145 KDADGRTALERAPS-----EEIKDLILN 167 (173)
Q Consensus 145 ~d~~G~TpLh~A~~-----~ei~~lLl~ 167 (173)
+|.+|.||||+|.. .+++++|+.
T Consensus 225 ~d~~G~TpLh~A~~~g~~~~eivk~Li~ 252 (661)
T PHA02917 225 IDKNYCTALQYYIKSSHIDIDIVKLLMK 252 (661)
T ss_pred CCCCCCcHHHHHHHcCCCcHHHHHHHHh
Confidence 99999999999973 378998875
No 60
>PHA02798 ankyrin-like protein; Provisional
Probab=98.89 E-value=3e-09 Score=93.97 Aligned_cols=75 Identities=17% Similarity=0.128 Sum_probs=64.4
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHc-----CCHHHHHHHHHcCCCcccccCCCCchhhhcC------c
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASE-----GDKPKIEELLRAGASYTVKDADGRTALERAP------S 158 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~-----g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~------~ 158 (173)
....++.++|++|++.|+++ +.||||.++.. ++.+++++|+++|||+|.+|.+|.||||+|. +
T Consensus 45 ~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~ 124 (489)
T PHA02798 45 QRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINN 124 (489)
T ss_pred hCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcCh
Confidence 34567899999999999998 45999998754 6789999999999999999999999999986 3
Q ss_pred hHHHHHHHhhhh
Q 030701 159 EEIKDLILNFSV 170 (173)
Q Consensus 159 ~ei~~lLl~~~~ 170 (173)
.+++++|+++++
T Consensus 125 ~~iv~~Ll~~Ga 136 (489)
T PHA02798 125 LEILLFMIENGA 136 (489)
T ss_pred HHHHHHHHHcCC
Confidence 588888887654
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.89 E-value=3.1e-09 Score=98.36 Aligned_cols=67 Identities=21% Similarity=0.152 Sum_probs=61.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC--------------------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCc
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP--------------------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRT 151 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~--------------------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~T 151 (173)
++|+||.+|++++|+.|++.|+++ +.||||.|+..|+.+++++|++.|+|++.+|..|+|
T Consensus 131 pLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T 210 (743)
T TIGR00870 131 ALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNT 210 (743)
T ss_pred HHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhH
Confidence 445599999999999999999886 128999999999999999999999999999999999
Q ss_pred hhhhcCc
Q 030701 152 ALERAPS 158 (173)
Q Consensus 152 pLh~A~~ 158 (173)
|||+|..
T Consensus 211 ~Lh~A~~ 217 (743)
T TIGR00870 211 LLHLLVM 217 (743)
T ss_pred HHHHHHh
Confidence 9999974
No 62
>PHA02792 ankyrin-like protein; Provisional
Probab=98.89 E-value=4e-09 Score=95.58 Aligned_cols=102 Identities=12% Similarity=0.048 Sum_probs=72.6
Q ss_pred CCccccccccCCCCCCCChhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------C--CcHHHHHHHcCCH---HHHH
Q 030701 65 VDAENAGIYGSQKRDDFDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------V--DILLMLAASEGDK---PKIE 133 (173)
Q Consensus 65 ~~~~~~~~~~~~~~d~~~~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~--dTpLh~Aa~~g~~---~~v~ 133 (173)
++.+...+..+.+.+.........++. ||..|+.+++++|++.|+++ + .||||+|+..... ++++
T Consensus 319 v~ieiIK~LId~Ga~~~r~~~~n~~~~----Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v~~Ilk 394 (631)
T PHA02792 319 VYINVIKCMIDEGATLYRFKHINKYFQ----KFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDVLSILK 394 (631)
T ss_pred ccHHHHHHHHHCCCccccCCcchHHHH----HHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhHHHHHH
Confidence 444444444444433332223334666 89999999999999999988 1 2889887765544 3577
Q ss_pred HHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 134 ELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 134 ~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
+|+.+|||+|.+|..|.||||+|+ +.+++++|+++++
T Consensus 395 lLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GA 434 (631)
T PHA02792 395 LCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGA 434 (631)
T ss_pred HHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCC
Confidence 888999999999999999999987 4788888887654
No 63
>PHA02917 ankyrin-like protein; Provisional
Probab=98.85 E-value=7.7e-09 Score=94.95 Aligned_cols=77 Identities=16% Similarity=0.158 Sum_probs=63.2
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHH--HHcCCHHHHHHHHHcCCCcccccC---CC-----------Cc
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLA--ASEGDKPKIEELLRAGASYTVKDA---DG-----------RT 151 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~A--a~~g~~~~v~~LL~~GAdi~~~d~---~G-----------~T 151 (173)
++|+..|+.++|++|++.|+++ +.||||.+ +..|+.+++++|+++||+++.+|. .| .|
T Consensus 108 ~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t 187 (661)
T PHA02917 108 YMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGT 187 (661)
T ss_pred HHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcccccccccccccccccccccccc
Confidence 4688999999999999999998 34999954 357899999999999999987654 34 59
Q ss_pred hhhhcC--------------chHHHHHHHhhhh
Q 030701 152 ALERAP--------------SEEIKDLILNFSV 170 (173)
Q Consensus 152 pLh~A~--------------~~ei~~lLl~~~~ 170 (173)
|||+|+ ..+++++|+++++
T Consensus 188 ~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Ga 220 (661)
T PHA02917 188 VLHLYIISHLYSESDTRAYVRPEVVKCLINHGI 220 (661)
T ss_pred HHHHHHhhcccccccccccCcHHHHHHHHHCCC
Confidence 999985 2589999987654
No 64
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.85 E-value=6.9e-09 Score=94.97 Aligned_cols=78 Identities=27% Similarity=0.355 Sum_probs=62.5
Q ss_pred HHHHHHcCCHHHHHHHHH-CCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcc---cccCCCCchhhhcC---c
Q 030701 93 MGMLAVEGTYDKMEALLS-QNIHP-------VDILLMLAASEGDKPKIEELLRAGASYT---VKDADGRTALERAP---S 158 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~-~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~---~~d~~G~TpLh~A~---~ 158 (173)
+|.||.-|.+++|+.|++ .|.-. +.||||+|+..||..++++|+..||+.+ ..|.+|.||||.|+ +
T Consensus 310 LH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 310 LHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGN 389 (929)
T ss_pred hHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhcc
Confidence 344999999999999998 44322 4499999999999999999999999877 45889999999997 4
Q ss_pred hHHHHHHHhhhh
Q 030701 159 EEIKDLILNFSV 170 (173)
Q Consensus 159 ~ei~~lLl~~~~ 170 (173)
..++++|+.+++
T Consensus 390 ~~av~~Li~~Ga 401 (929)
T KOG0510|consen 390 TSAVQKLISHGA 401 (929)
T ss_pred HHHHHHHHHcCC
Confidence 677777776654
No 65
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.82 E-value=1.4e-08 Score=63.59 Aligned_cols=44 Identities=23% Similarity=0.231 Sum_probs=36.7
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELL 136 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL 136 (173)
++.|+..|+.+++++|++.|.++ +.||||+|+..|+.+++++|+
T Consensus 5 lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 5 LHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp HHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 44599999999999999999988 459999999999999999986
No 66
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.79 E-value=8.3e-09 Score=77.50 Aligned_cols=73 Identities=19% Similarity=0.189 Sum_probs=54.1
Q ss_pred HHHHcCCHHHHHHHHHCCC----------CC-CCcHHHHHHHcCCH---HHHHHHHHcCCCcccccC-CCCchhhhcC--
Q 030701 95 MLAVEGTYDKMEALLSQNI----------HP-VDILLMLAASEGDK---PKIEELLRAGASYTVKDA-DGRTALERAP-- 157 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga----------~~-~dTpLh~Aa~~g~~---~~v~~LL~~GAdi~~~d~-~G~TpLh~A~-- 157 (173)
+|+..|+...+........ +. +.||||+|+..|+. +++++|+..|++++.++. +|.||||+|+
T Consensus 23 ~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~ 102 (154)
T PHA02736 23 YLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYT 102 (154)
T ss_pred HHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHh
Confidence 4999998533221111111 11 55999999999987 468899999999999984 8999999997
Q ss_pred -chHHHHHHHh
Q 030701 158 -SEEIKDLILN 167 (173)
Q Consensus 158 -~~ei~~lLl~ 167 (173)
+.+++++|+.
T Consensus 103 ~~~~i~~~Ll~ 113 (154)
T PHA02736 103 QNYELATWLCN 113 (154)
T ss_pred CCHHHHHHHHh
Confidence 4678888775
No 67
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.78 E-value=3.8e-08 Score=75.38 Aligned_cols=74 Identities=31% Similarity=0.385 Sum_probs=65.3
Q ss_pred HHHHHcCC-----HHHHHHHHHCCC--CC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc-
Q 030701 94 GMLAVEGT-----YDKMEALLSQNI--HP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS- 158 (173)
Q Consensus 94 ~~Aa~~G~-----~~~v~~LL~~Ga--~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~- 158 (173)
++|+..|+ .++++.||+.|+ +. ++||||+|+..|+.+++++|+..|++++.++..|.|++++|..
T Consensus 111 ~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~ 190 (235)
T COG0666 111 HLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKN 190 (235)
T ss_pred HHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhccc
Confidence 34999999 999999999999 33 5599999999999999999999999999999999999999974
Q ss_pred --hHHHHHHHh
Q 030701 159 --EEIKDLILN 167 (173)
Q Consensus 159 --~ei~~lLl~ 167 (173)
.++.+++..
T Consensus 191 ~~~~~~~~l~~ 201 (235)
T COG0666 191 GRIELVKLLLD 201 (235)
T ss_pred chHHHHHHHHh
Confidence 556666554
No 68
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.77 E-value=6.1e-08 Score=67.85 Aligned_cols=72 Identities=29% Similarity=0.387 Sum_probs=43.5
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~lLl 166 (173)
|+..|+.++++.|++.|.+. +.||||.|+..+..++++.|+..|++++..+..|.||+|+|.. .+++++|.
T Consensus 14 a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~ 93 (126)
T cd00204 14 AASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLL 93 (126)
T ss_pred HHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 66666666666666666542 3366666666666666666666666666666666666666642 44555554
Q ss_pred h
Q 030701 167 N 167 (173)
Q Consensus 167 ~ 167 (173)
.
T Consensus 94 ~ 94 (126)
T cd00204 94 K 94 (126)
T ss_pred H
Confidence 4
No 69
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.77 E-value=1.7e-08 Score=92.51 Aligned_cols=81 Identities=23% Similarity=0.263 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC----C--CcHHHHHHHcCCHHHHHHHHH-cC-CCcccccCCCCchhhhcCc---
Q 030701 90 FNYMGMLAVEGTYDKMEALLSQNIHP----V--DILLMLAASEGDKPKIEELLR-AG-ASYTVKDADGRTALERAPS--- 158 (173)
Q Consensus 90 ~~~~~~Aa~~G~~~~v~~LL~~Ga~~----~--dTpLh~Aa~~g~~~~v~~LL~-~G-Adi~~~d~~G~TpLh~A~~--- 158 (173)
+.+||+||++|+.+.|+.|+..|+++ . .||||.|+..|...+|+-||+ .| ...|..|-.|.||||+|+.
T Consensus 274 ~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH 353 (929)
T KOG0510|consen 274 CTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGH 353 (929)
T ss_pred CchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCH
Confidence 34566799999999999999999998 2 299999999999999999997 65 5788889999999999984
Q ss_pred hHHHHHHHhhhh
Q 030701 159 EEIKDLILNFSV 170 (173)
Q Consensus 159 ~ei~~lLl~~~~ 170 (173)
..++++|++.++
T Consensus 354 ~~v~qlLl~~GA 365 (929)
T KOG0510|consen 354 DRVVQLLLNKGA 365 (929)
T ss_pred HHHHHHHHhcCh
Confidence 689999987654
No 70
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.76 E-value=3.4e-08 Score=86.44 Aligned_cols=71 Identities=25% Similarity=0.246 Sum_probs=64.7
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhh
Q 030701 83 RDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALER 155 (173)
Q Consensus 83 ~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~ 155 (173)
.+-..+|+. .++.|++++.-.||..|+++ ++||||.|+..|..-.+++|+-.|||++..|.+|.||+.+
T Consensus 131 ~~LsrQLha----svRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~ 206 (669)
T KOG0818|consen 131 KDLSKQLHS----SVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDY 206 (669)
T ss_pred HHHHHHHHH----HhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHH
Confidence 344556666 88999999999999999988 7799999999999999999999999999999999999999
Q ss_pred cC
Q 030701 156 AP 157 (173)
Q Consensus 156 A~ 157 (173)
|.
T Consensus 207 AR 208 (669)
T KOG0818|consen 207 AR 208 (669)
T ss_pred HH
Confidence 96
No 71
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=98.74 E-value=1.3e-08 Score=81.43 Aligned_cols=63 Identities=25% Similarity=0.301 Sum_probs=59.3
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
+|+..|..++|++|+.++.++ +-|||-+|+..+|.+|++.|+..|||++..+..|.+++++|.
T Consensus 199 LAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAV 267 (296)
T KOG0502|consen 199 LATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAV 267 (296)
T ss_pred HHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHH
Confidence 588889999999999999988 449999999999999999999999999999999999999997
No 72
>PHA02730 ankyrin-like protein; Provisional
Probab=98.73 E-value=3.2e-08 Score=90.53 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=44.2
Q ss_pred HHHHHHcCC----HHHHHHHHHCCCC--C------CCcHHHH---HHHcC---------CHHHHHHHHHcCCCcccccCC
Q 030701 93 MGMLAVEGT----YDKMEALLSQNIH--P------VDILLML---AASEG---------DKPKIEELLRAGASYTVKDAD 148 (173)
Q Consensus 93 ~~~Aa~~G~----~~~v~~LL~~Ga~--~------~dTpLh~---Aa~~g---------~~~~v~~LL~~GAdi~~~d~~ 148 (173)
+|+|+..++ .+++++||+.|++ + +.||||. +...+ ..+++++|+.+|||++.+|..
T Consensus 382 LH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~ 461 (672)
T PHA02730 382 LHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNE 461 (672)
T ss_pred HHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCC
Confidence 334665553 6777777766652 2 3366662 22121 123466666667777766666
Q ss_pred CCchhhhcC---chHHHHHHHhhhh
Q 030701 149 GRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 149 G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
|.||||+|+ +.+++++|+++++
T Consensus 462 G~TPLh~Aa~~~~~eive~LI~~GA 486 (672)
T PHA02730 462 NKTLLYYAVDVNNIQFARRLLEYGA 486 (672)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHCCC
Confidence 777777665 2556666665543
No 73
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.71 E-value=8.3e-08 Score=73.46 Aligned_cols=75 Identities=32% Similarity=0.389 Sum_probs=66.1
Q ss_pred HHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCC-----HHHHHHHHHcCC---CcccccCCCCchhhhcC---
Q 030701 95 MLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGD-----KPKIEELLRAGA---SYTVKDADGRTALERAP--- 157 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~-----~~~v~~LL~~GA---di~~~d~~G~TpLh~A~--- 157 (173)
.++..+..+.+++++..|+++ ++||||+|+..++ .++++.|++.|+ +.+.+|..|.||||+|.
T Consensus 79 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~ 158 (235)
T COG0666 79 SAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNG 158 (235)
T ss_pred HHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcC
Confidence 399999999999999999988 5599999999999 999999999999 66667999999999997
Q ss_pred chHHHHHHHhhh
Q 030701 158 SEEIKDLILNFS 169 (173)
Q Consensus 158 ~~ei~~lLl~~~ 169 (173)
..+++++|+...
T Consensus 159 ~~~~~~~ll~~~ 170 (235)
T COG0666 159 DADIVELLLEAG 170 (235)
T ss_pred chHHHHHHHhcC
Confidence 357888877654
No 74
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.69 E-value=4.7e-08 Score=85.94 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=49.5
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKDLIL 166 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~lLl 166 (173)
|+..|+++-++.|+..|+.+ +.|+||.+|.-.+.+||.+|+++|++||..|..|+||||.|+. ..++..|+
T Consensus 47 A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li 126 (527)
T KOG0505|consen 47 ACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLI 126 (527)
T ss_pred ccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHH
Confidence 66677777777777666655 3367777777777777777777777777777777777776653 45666665
Q ss_pred hhhh
Q 030701 167 NFSV 170 (173)
Q Consensus 167 ~~~~ 170 (173)
++++
T Consensus 127 ~~gA 130 (527)
T KOG0505|consen 127 QHGA 130 (527)
T ss_pred Hhhh
Confidence 5543
No 75
>PHA02730 ankyrin-like protein; Provisional
Probab=98.68 E-value=6.6e-08 Score=88.47 Aligned_cols=77 Identities=9% Similarity=0.006 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHcC---CHHHHHHHHHCCCCC------CCcHHHHHHHcC--CHHHHHHHHHcCC--CcccccCCCCchh
Q 030701 87 EQYFNYMGMLAVEG---TYDKMEALLSQNIHP------VDILLMLAASEG--DKPKIEELLRAGA--SYTVKDADGRTAL 153 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G---~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g--~~~~v~~LL~~GA--di~~~d~~G~TpL 153 (173)
+.||. |+..| +.++|++||+.|+++ |.||||+|+..+ +.+++++|+..|+ +++..+..+.+||
T Consensus 43 TaLh~----A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~~~~d~~l 118 (672)
T PHA02730 43 NALHC----YVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTSNINDFDL 118 (672)
T ss_pred cHHHH----HHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccccccCCchH
Confidence 44665 99887 599999999999998 569999999866 7999999999965 5577787789999
Q ss_pred hhcC-----chHHHHHHHh
Q 030701 154 ERAP-----SEEIKDLILN 167 (173)
Q Consensus 154 h~A~-----~~ei~~lLl~ 167 (173)
+.+. ..+++++|+.
T Consensus 119 ~~y~~s~n~~~~~vk~Li~ 137 (672)
T PHA02730 119 YSYMSSDNIDLRLLKYLIV 137 (672)
T ss_pred HHHHHhcCCcHHHHHHHHH
Confidence 9765 2578888884
No 76
>PHA02792 ankyrin-like protein; Provisional
Probab=98.67 E-value=6.6e-08 Score=87.81 Aligned_cols=62 Identities=11% Similarity=0.005 Sum_probs=54.5
Q ss_pred HHHcCCH---HHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 96 LAVEGTY---DKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 96 Aa~~G~~---~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|+..... ++++.|++.|+++ +.||||+|+..++.+++++|+++|++++.+|..|.||||+|.
T Consensus 381 A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~ 451 (631)
T PHA02792 381 TLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICV 451 (631)
T ss_pred HHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 5555443 4688899999988 459999999999999999999999999999999999999985
No 77
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.64 E-value=3.3e-08 Score=86.12 Aligned_cols=82 Identities=26% Similarity=0.272 Sum_probs=72.3
Q ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC--CC----cHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCchhhhcC
Q 030701 85 DVEQYFNYMGMLAVEGTYDKMEALLSQNIHP--VD----ILLMLAASEGDKPKIEELL-RAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 85 ~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~--~d----TpLh~Aa~~g~~~~v~~LL-~~GAdi~~~d~~G~TpLh~A~ 157 (173)
.+-.++. ||+.|++..++.+.-+|.+. .| |+||.|+..|+.+++++|+ ..+.|++.+|++|+|||+-|.
T Consensus 506 ~~i~~~~----aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~ 581 (622)
T KOG0506|consen 506 TVINVMY----AAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAK 581 (622)
T ss_pred chhhhhh----hhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhH
Confidence 3445666 99999999999999999988 33 9999999999999999999 558999999999999999997
Q ss_pred ---chHHHHHHHhhhh
Q 030701 158 ---SEEIKDLILNFSV 170 (173)
Q Consensus 158 ---~~ei~~lLl~~~~ 170 (173)
+.+++++|.++..
T Consensus 582 ~F~h~~v~k~L~~~~~ 597 (622)
T KOG0506|consen 582 HFKHKEVVKLLEEAQY 597 (622)
T ss_pred hcCcHHHHHHHHHHhc
Confidence 4899999998765
No 78
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.63 E-value=7.9e-08 Score=88.01 Aligned_cols=80 Identities=23% Similarity=0.270 Sum_probs=69.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC-----C------------------------CcHHHHHHHcCCHHHHHHHHHcCCCc
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP-----V------------------------DILLMLAASEGDKPKIEELLRAGASY 142 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~-----~------------------------dTpLh~Aa~~g~~~~v~~LL~~GAdi 142 (173)
.+|+|..+-+.++|+.|++.|||+ | ..||-+||+.+..+++++|+++|||+
T Consensus 187 aLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~ 266 (782)
T KOG3676|consen 187 ALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADP 266 (782)
T ss_pred hHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCC
Confidence 578899999999999999999998 1 16999999999999999999999999
Q ss_pred ccccCCCCchhhhcCc---hHHHHHHHhhhhc
Q 030701 143 TVKDADGRTALERAPS---EEIKDLILNFSVQ 171 (173)
Q Consensus 143 ~~~d~~G~TpLh~A~~---~ei~~lLl~~~~~ 171 (173)
+.+|..|.|.||...- .++.++++++...
T Consensus 267 ~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~ 298 (782)
T KOG3676|consen 267 NAQDSNGNTVLHMLVIHFVTEMYDLALELGAN 298 (782)
T ss_pred CccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999998763 5666777766543
No 79
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.62 E-value=6.6e-08 Score=54.59 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=29.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccC
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDA 147 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~ 147 (173)
+.||||+|+..|+.+++++|+++|++++.+|+
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADINARDN 33 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence 46999999999999999999999999998874
No 80
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.61 E-value=3.1e-07 Score=64.20 Aligned_cols=70 Identities=31% Similarity=0.430 Sum_probs=61.9
Q ss_pred HHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKDLI 165 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~lL 165 (173)
|+..++.++++.|+..|+++ +.||+|+|+..++.+++++|+..|.+++..+..+.||+++|.. .+++++|
T Consensus 47 a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 47 AAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence 99999999999999999654 4499999999999999999999999999999999999999974 4555554
No 81
>PF13606 Ank_3: Ankyrin repeat
Probab=98.60 E-value=6.7e-08 Score=53.75 Aligned_cols=29 Identities=34% Similarity=0.379 Sum_probs=26.8
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTV 144 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~ 144 (173)
++||||+|+..|+.+++++|+++|+|+|.
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~ 30 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVNA 30 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence 46999999999999999999999999974
No 82
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.57 E-value=4.9e-08 Score=88.88 Aligned_cols=75 Identities=24% Similarity=0.290 Sum_probs=65.2
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHHH
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIKD 163 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~~ 163 (173)
+|+||-.|+.++|+.|+.++..+ +.||||.++.+||.+++.+|+.+|+|+-++|+.+.|+|++|+. .++++
T Consensus 86 lhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq 165 (854)
T KOG0507|consen 86 LHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQ 165 (854)
T ss_pred EEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHH
Confidence 45599999999999999988444 4499999999999999999999999999999999999999984 56777
Q ss_pred HHHh
Q 030701 164 LILN 167 (173)
Q Consensus 164 lLl~ 167 (173)
+|+.
T Consensus 166 ~ll~ 169 (854)
T KOG0507|consen 166 MLLQ 169 (854)
T ss_pred HHhh
Confidence 7754
No 83
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.53 E-value=1.9e-07 Score=83.02 Aligned_cols=75 Identities=29% Similarity=0.337 Sum_probs=67.6
Q ss_pred HHHcCCHHHHHHHHHCCCCC--------CC--cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP--------VD--ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~--------~d--TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
|....++..+-.||.+|... +| |+||+||..|++...++|+-.|+|+.++|..|+|+|.+|. ..||.
T Consensus 631 A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~ 710 (749)
T KOG0705|consen 631 AVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECI 710 (749)
T ss_pred HHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHH
Confidence 77888888999999988654 23 9999999999999999999999999999999999999997 38999
Q ss_pred HHHHhhhh
Q 030701 163 DLILNFSV 170 (173)
Q Consensus 163 ~lLl~~~~ 170 (173)
++|+.|++
T Consensus 711 d~llq~gc 718 (749)
T KOG0705|consen 711 DVLLQYGC 718 (749)
T ss_pred HHHHHcCC
Confidence 99999875
No 84
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=98.49 E-value=2.8e-07 Score=81.44 Aligned_cols=79 Identities=20% Similarity=0.266 Sum_probs=67.0
Q ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhh
Q 030701 83 RDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALER 155 (173)
Q Consensus 83 ~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~ 155 (173)
.++++.||+ |.-.||+++|++||+.|+++ |.||||+|+.+++..+++.|++.||-+.+.+ .++.|+.+-
T Consensus 581 dEGITaLHN----AiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eK 656 (752)
T KOG0515|consen 581 DEGITALHN----AICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEK 656 (752)
T ss_pred ccchhHHhh----hhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhh
Confidence 456778899 99999999999999999998 4499999999999999999999999988765 478899876
Q ss_pred cCc-----hHHHHHH
Q 030701 156 APS-----EEIKDLI 165 (173)
Q Consensus 156 A~~-----~ei~~lL 165 (173)
+.. .+|.++|
T Consensus 657 Cee~eeGY~~CsqyL 671 (752)
T KOG0515|consen 657 CEEMEEGYDQCSQYL 671 (752)
T ss_pred cchhhhhHHHHHHHH
Confidence 642 3566665
No 85
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.43 E-value=3.3e-07 Score=80.67 Aligned_cols=82 Identities=20% Similarity=0.228 Sum_probs=71.4
Q ss_pred CChhhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhh
Q 030701 81 FDRDDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALE 154 (173)
Q Consensus 81 ~~~~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh 154 (173)
+..+..+.+++ ++...+.++|++|++.|+++ +.||||.|+..||..++++|+..||++.+.+.+|..|++
T Consensus 69 ~n~DglTalhq----~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~d 144 (527)
T KOG0505|consen 69 CNVDGLTALHQ----ACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYD 144 (527)
T ss_pred cCCccchhHHH----HHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccc
Confidence 44556677888 99999999999999999998 449999999999999999999999999999999999999
Q ss_pred hcCchHHHHHHH
Q 030701 155 RAPSEEIKDLIL 166 (173)
Q Consensus 155 ~A~~~ei~~lLl 166 (173)
++..+...+++.
T Consensus 145 l~e~ea~~~~l~ 156 (527)
T KOG0505|consen 145 LAEDEATLDVLE 156 (527)
T ss_pred cccCcchhHHHH
Confidence 997654444443
No 86
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.41 E-value=1.1e-06 Score=75.12 Aligned_cols=83 Identities=23% Similarity=0.351 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHCCCCC--CC----cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCch
Q 030701 86 VEQYFNYMGMLAVEGTYDKMEALLSQNIHP--VD----ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSE 159 (173)
Q Consensus 86 ~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~--~d----TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ 159 (173)
..+++. ||+.|+++.|+.|++.|.++ .| .||.+|+..||.++|++||++||-...-.-+|...+.-|-+.
T Consensus 37 f~elce----acR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaLnd 112 (516)
T KOG0511|consen 37 FGELCE----ACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGALND 112 (516)
T ss_pred hHHHHH----HhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhhhH
Confidence 445777 99999999999999999888 33 899999999999999999999998776666788776667788
Q ss_pred HHHHHHHhhhhcc
Q 030701 160 EIKDLILNFSVQK 172 (173)
Q Consensus 160 ei~~lLl~~~~~~ 172 (173)
.|..+|+.|---|
T Consensus 113 ~IR~mllsydi~K 125 (516)
T KOG0511|consen 113 RIRRMLLSYDILK 125 (516)
T ss_pred HHHHHHHHHHHHH
Confidence 8998888875433
No 87
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.38 E-value=6.5e-07 Score=82.99 Aligned_cols=76 Identities=18% Similarity=0.076 Sum_probs=61.3
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcC---------CHHHHHHHHHcCCCc-------ccccCCC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEG---------DKPKIEELLRAGASY-------TVKDADG 149 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g---------~~~~v~~LL~~GAdi-------~~~d~~G 149 (173)
++++|+..|+.++++.|++.|+++ ++||||+|+..+ ...+.++++..+++. ++.|.+|
T Consensus 178 pL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g 257 (743)
T TIGR00870 178 PLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQG 257 (743)
T ss_pred HHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCC
Confidence 344599999999999999999887 669999999986 334667777666554 6789999
Q ss_pred CchhhhcCc---hHHHHHHHh
Q 030701 150 RTALERAPS---EEIKDLILN 167 (173)
Q Consensus 150 ~TpLh~A~~---~ei~~lLl~ 167 (173)
.||||+|+. .++.++|++
T Consensus 258 ~TPL~~A~~~g~~~l~~lLL~ 278 (743)
T TIGR00870 258 LTPLKLAAKEGRIVLFRLKLA 278 (743)
T ss_pred CCchhhhhhcCCccHHHHHHH
Confidence 999999973 678888876
No 88
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.32 E-value=1.5e-06 Score=80.06 Aligned_cols=65 Identities=20% Similarity=0.248 Sum_probs=58.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHc-------CCCcccccCCCCchhhhcC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRA-------GASYTVKDADGRTALERAP 157 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~-------GAdi~~~d~~G~TpLh~A~ 157 (173)
+|+|+..|+.+++++|++.|+++ +.||||+|+..|+.+++++|+.+ |++++..+..|.+|+..+.
T Consensus 119 Lh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 119 LHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence 44599999999999999999987 45999999999999999999998 9999999988888877654
No 89
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=98.32 E-value=5.2e-07 Score=82.37 Aligned_cols=83 Identities=18% Similarity=0.135 Sum_probs=71.9
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 84 DDVEQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 84 ~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
.+.+.+++ |+.+|+.++++.|++.-+-. +.+|||+|++.|+.++++.|+.++..+|+.+..|.||||.|+
T Consensus 48 ~gfTalhh----a~Lng~~~is~llle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaa 123 (854)
T KOG0507|consen 48 SGFTLLHH----AVLNGQNQISKLLLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAA 123 (854)
T ss_pred cchhHHHH----HHhcCchHHHHHHhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhh
Confidence 34444666 99999999999999876544 449999999999999999999999999999999999999998
Q ss_pred c---hHHHHHHHhhhh
Q 030701 158 S---EEIKDLILNFSV 170 (173)
Q Consensus 158 ~---~ei~~lLl~~~~ 170 (173)
. .+++.+|+.+..
T Consensus 124 qhgh~dvv~~Ll~~~a 139 (854)
T KOG0507|consen 124 QHGHLEVVFYLLKKNA 139 (854)
T ss_pred hhcchHHHHHHHhcCC
Confidence 4 789999988764
No 90
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.26 E-value=2.6e-06 Score=70.71 Aligned_cols=80 Identities=24% Similarity=0.186 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccccc-CCCCchhhhcC--
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKD-ADGRTALERAP-- 157 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d-~~G~TpLh~A~-- 157 (173)
.+|++ +...|+.+-...|++---++ |-++|..|++.|+.+.|++||+.|||+|.+. ..+.||||+|+
T Consensus 14 ~~Lle----~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALS 89 (396)
T KOG1710|consen 14 SPLLE----AIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALS 89 (396)
T ss_pred hHHHH----HHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHc
Confidence 56888 88999999888888642222 5599999999999999999999999999854 46899999997
Q ss_pred -chHHHHHHHhhhh
Q 030701 158 -SEEIKDLILNFSV 170 (173)
Q Consensus 158 -~~ei~~lLl~~~~ 170 (173)
+.++..+|++.+.
T Consensus 90 Gn~dvcrllldaGa 103 (396)
T KOG1710|consen 90 GNQDVCRLLLDAGA 103 (396)
T ss_pred CCchHHHHHHhccC
Confidence 6889999987654
No 91
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.15 E-value=1.6e-06 Score=80.08 Aligned_cols=64 Identities=23% Similarity=0.194 Sum_probs=59.5
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|+++..|..+++++||.+|+++ |.||||-|...|+++|+-.||.+|+...++|.+|..||..-.
T Consensus 57 H~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~ 127 (1267)
T KOG0783|consen 57 HIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLS 127 (1267)
T ss_pred eeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHh
Confidence 4699999999999999999998 449999999999999999999999999999999999998654
No 92
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.15 E-value=1.7e-06 Score=82.12 Aligned_cols=78 Identities=26% Similarity=0.362 Sum_probs=69.5
Q ss_pred HHHHcCCHHHHHHHHHCCCCC--CC----cHHHHHHHcCCHHHHHHHHHcCCCccc-ccCCCCchhhhcC---chHHHHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHP--VD----ILLMLAASEGDKPKIEELLRAGASYTV-KDADGRTALERAP---SEEIKDL 164 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~--~d----TpLh~Aa~~g~~~~v~~LL~~GAdi~~-~d~~G~TpLh~A~---~~ei~~l 164 (173)
+||..||.|.|++|+.+|+++ .| +||.+|+-.||..+|+.|+++.|+++. .|+.+.|+|.+|+ ..+++++
T Consensus 763 ~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvel 842 (2131)
T KOG4369|consen 763 SACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVEL 842 (2131)
T ss_pred ccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHH
Confidence 599999999999999999998 33 999999999999999999999999987 5778999999998 3789999
Q ss_pred HHhhhhcc
Q 030701 165 ILNFSVQK 172 (173)
Q Consensus 165 Ll~~~~~~ 172 (173)
|++...++
T Consensus 843 Ll~~gank 850 (2131)
T KOG4369|consen 843 LLNAGANK 850 (2131)
T ss_pred HHHhhccc
Confidence 99887764
No 93
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.14 E-value=4.1e-06 Score=73.98 Aligned_cols=77 Identities=25% Similarity=0.276 Sum_probs=57.9
Q ss_pred HHHHHcCCHHHHHHHHHCCC--CC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---ch-HH
Q 030701 94 GMLAVEGTYDKMEALLSQNI--HP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SE-EI 161 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga--~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~-ei 161 (173)
|.+....+.+.+..++.... .+ +.||||+|+..||.+++++|+.+|||+.++|.+|++|||.|+ ++ .+
T Consensus 25 h~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i 104 (560)
T KOG0522|consen 25 HWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQII 104 (560)
T ss_pred chhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHH
Confidence 34666666666655433221 11 569999999999999999999999999999999999999997 33 45
Q ss_pred HHHHHhhhh
Q 030701 162 KDLILNFSV 170 (173)
Q Consensus 162 ~~lLl~~~~ 170 (173)
..+|..+..
T Consensus 105 ~~vlr~~~~ 113 (560)
T KOG0522|consen 105 TEVLRHLKY 113 (560)
T ss_pred HHHHHHhHH
Confidence 566665543
No 94
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.13 E-value=6.1e-06 Score=75.90 Aligned_cols=76 Identities=21% Similarity=0.235 Sum_probs=66.5
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCC--cccccCCCCchhhhcCc---hH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGAS--YTVKDADGRTALERAPS---EE 160 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAd--i~~~d~~G~TpLh~A~~---~e 160 (173)
|+..||-.++.|++++|+++|+|+ |||.||.....-..++-..+|..|++ ..++|.+|-|||-+|+. .+
T Consensus 243 PLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~e 322 (782)
T KOG3676|consen 243 PLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKE 322 (782)
T ss_pred chHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHH
Confidence 456799999999999999999999 77999999998888899999999999 99999999999999984 55
Q ss_pred HHHHHHh
Q 030701 161 IKDLILN 167 (173)
Q Consensus 161 i~~lLl~ 167 (173)
+.+-+++
T Consensus 323 mf~~ile 329 (782)
T KOG3676|consen 323 MFQHILE 329 (782)
T ss_pred HHHHHHH
Confidence 5555443
No 95
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.92 E-value=2.6e-05 Score=68.64 Aligned_cols=70 Identities=24% Similarity=0.393 Sum_probs=61.2
Q ss_pred CHHHHHHHHHCCCCC------------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHHHhh
Q 030701 101 TYDKMEALLSQNIHP------------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILNF 168 (173)
Q Consensus 101 ~~~~v~~LL~~Ga~~------------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lLl~~ 168 (173)
-.+.+++|.+.+.+. ..|+||+|+..|..++|.+||+.|+|+.++|..|+||..++.+++|...++.+
T Consensus 403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~nkdVk~~F~a~ 482 (591)
T KOG2505|consen 403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSANKDVKSIFIAR 482 (591)
T ss_pred chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccccHHHHHHHHHH
Confidence 357788999888765 12999999999999999999999999999999999999999999999887755
Q ss_pred hh
Q 030701 169 SV 170 (173)
Q Consensus 169 ~~ 170 (173)
.+
T Consensus 483 ~~ 484 (591)
T KOG2505|consen 483 RV 484 (591)
T ss_pred HH
Confidence 43
No 96
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=97.87 E-value=1.9e-05 Score=49.78 Aligned_cols=32 Identities=22% Similarity=0.172 Sum_probs=22.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLA 123 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~A 123 (173)
++|+||..|+.+++++|+..|+++ +.||||+|
T Consensus 19 ~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 19 PLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred HHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 344599999999999999999988 55999987
No 97
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=97.70 E-value=3.5e-05 Score=73.52 Aligned_cols=80 Identities=30% Similarity=0.332 Sum_probs=65.1
Q ss_pred HHHHHHHHHcCCHHHHHHHHHCCCCC-------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---h
Q 030701 90 FNYMGMLAVEGTYDKMEALLSQNIHP-------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---E 159 (173)
Q Consensus 90 ~~~~~~Aa~~G~~~~v~~LL~~Ga~~-------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ 159 (173)
|.++-||+.-||..+|+.|+...+++ +||+|-+||..|..++|++||.+||+-..++-...|||.+|.. .
T Consensus 791 f~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~ 870 (2131)
T KOG4369|consen 791 FVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYT 870 (2131)
T ss_pred chhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchH
Confidence 33444588889999999998887776 6689999999999999999999999888888888899988874 5
Q ss_pred HHHHHHHhhh
Q 030701 160 EIKDLILNFS 169 (173)
Q Consensus 160 ei~~lLl~~~ 169 (173)
+|+.+|+.++
T Consensus 871 ~iI~~llS~G 880 (2131)
T KOG4369|consen 871 KIIHALLSSG 880 (2131)
T ss_pred HHHHHHhhcc
Confidence 7777777665
No 98
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.69 E-value=6.5e-05 Score=67.35 Aligned_cols=73 Identities=23% Similarity=0.286 Sum_probs=62.8
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC--------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHH
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP--------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIK 162 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~--------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~ 162 (173)
|+|+..|+-++|++++++|... +.|+||.|+..++..+.++|++.||.....|.+|.||-.-|. ..++.
T Consensus 904 h~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dla 983 (1004)
T KOG0782|consen 904 HYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLA 983 (1004)
T ss_pred HHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCchHH
Confidence 3599999999999999998643 559999999999999999999999999999999999998775 35555
Q ss_pred HHHH
Q 030701 163 DLIL 166 (173)
Q Consensus 163 ~lLl 166 (173)
..|.
T Consensus 984 ayle 987 (1004)
T KOG0782|consen 984 AYLE 987 (1004)
T ss_pred HHHh
Confidence 5554
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=97.46 E-value=0.00018 Score=39.72 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=21.2
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP 115 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~ 115 (173)
++|+||..|+.+++++||+.|+++
T Consensus 5 ~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 5 PLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCC
Confidence 345699999999999999999886
No 100
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.35 E-value=0.00015 Score=67.91 Aligned_cols=66 Identities=24% Similarity=0.242 Sum_probs=61.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
.+|+|+..|..-.++.|+..|+++ ++||||.+...|+...+..|+++||+.++.+.+|.+|+++|.
T Consensus 659 ~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~ 730 (785)
T KOG0521|consen 659 LLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAM 730 (785)
T ss_pred hhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHh
Confidence 356799999999999999999988 669999999999999999999999999999999999999985
No 101
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=96.99 E-value=0.00035 Score=65.11 Aligned_cols=55 Identities=31% Similarity=0.337 Sum_probs=50.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcccccCC-CCchhhhcC---chHHHHHHHhhhh
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYTVKDAD-GRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~-G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
|.|+||+++..+..++++.||.+|+|++.+|.+ |+||||-|. +.++..+|+.+.+
T Consensus 52 GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~ 110 (1267)
T KOG0783|consen 52 GRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGR 110 (1267)
T ss_pred ccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCC
Confidence 569999999999999999999999999999985 999999886 6889999988764
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=96.97 E-value=0.0014 Score=36.56 Aligned_cols=24 Identities=21% Similarity=0.173 Sum_probs=21.7
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP 115 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~ 115 (173)
++|+|+..|+.+++++||++|+++
T Consensus 5 pLh~A~~~~~~~~v~~Ll~~ga~~ 28 (33)
T PF00023_consen 5 PLHYAAQRGHPDIVKLLLKHGADI 28 (33)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHCcCCC
Confidence 456699999999999999999987
No 103
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.85 E-value=0.0024 Score=32.25 Aligned_cols=28 Identities=32% Similarity=0.343 Sum_probs=23.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCcc
Q 030701 116 VDILLMLAASEGDKPKIEELLRAGASYT 143 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~GAdi~ 143 (173)
++||+|+++..++.++++.|+..|.+++
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3589999999999999999998888764
No 104
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.47 E-value=0.0036 Score=53.98 Aligned_cols=53 Identities=23% Similarity=0.257 Sum_probs=48.0
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 118 ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 118 TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
--|..||..|..+.|+.|++.|.++|..|....+||.+|. ++.++++|++.++
T Consensus 38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGA 93 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA 93 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCC
Confidence 3578999999999999999999999999999999999986 6889999998763
No 105
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=96.12 E-value=0.011 Score=52.43 Aligned_cols=74 Identities=31% Similarity=0.387 Sum_probs=57.3
Q ss_pred HHHcCCHHHHHHHHHCCCCC--------CC--cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCc---hHHH
Q 030701 96 LAVEGTYDKMEALLSQNIHP--------VD--ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPS---EEIK 162 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~--------~d--TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~---~ei~ 162 (173)
-..-.+++.+..--....++ .+ .++++|+..|.+..++-+.-.|.|++.+|.+.+|+||.|+. .+++
T Consensus 476 ~fNFHNYD~L~h~~~~K~DPRR~~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~ 555 (622)
T KOG0506|consen 476 KFNFHNYDSLRHPDNRKIDPRREGGPRENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVV 555 (622)
T ss_pred HhcccCchhhcccccccCCcccccCcccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHH
Confidence 33345666655444444455 12 57899999999999999999999999999999999999984 5788
Q ss_pred HHHHhhh
Q 030701 163 DLILNFS 169 (173)
Q Consensus 163 ~lLl~~~ 169 (173)
++|++.+
T Consensus 556 kfl~~~~ 562 (622)
T KOG0506|consen 556 KFLLNAC 562 (622)
T ss_pred HHHHHHH
Confidence 8888754
No 106
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=95.84 E-value=0.015 Score=52.64 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCCC----CC--cHHHHHHHcCCHHHHHHHHHcCC--CcccccCCCCchhhhcC-
Q 030701 87 EQYFNYMGMLAVEGTYDKMEALLSQNIHP----VD--ILLMLAASEGDKPKIEELLRAGA--SYTVKDADGRTALERAP- 157 (173)
Q Consensus 87 ~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~----~d--TpLh~Aa~~g~~~~v~~LL~~GA--di~~~d~~G~TpLh~A~- 157 (173)
++++. |+..+++-.+..+-..|.+. .| +.||+|+..|..++|+++|++|- -.+..|..|.|+||-|+
T Consensus 868 eeil~----av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~ 943 (1004)
T KOG0782|consen 868 EEILR----AVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAAC 943 (1004)
T ss_pred HHHHH----HHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHH
Confidence 44677 88888876666665566555 22 89999999999999999999985 35667889999999886
Q ss_pred --chHHHHHHHhhh
Q 030701 158 --SEEIKDLILNFS 169 (173)
Q Consensus 158 --~~ei~~lLl~~~ 169 (173)
+..+..+|.+.+
T Consensus 944 ~~~r~vc~~lvdag 957 (1004)
T KOG0782|consen 944 QRNRAVCQLLVDAG 957 (1004)
T ss_pred hcchHHHHHHHhcc
Confidence 567888887654
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=95.63 E-value=0.022 Score=51.54 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=46.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHcCCCccc
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRAGASYTV 144 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~ 144 (173)
+|+||..|++.+.++||=.|+|+ ++|+|.+|-..|..+|+.+|+.+|...+.
T Consensus 665 LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e~ 722 (749)
T KOG0705|consen 665 LHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDEC 722 (749)
T ss_pred hhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCccc
Confidence 44699999999999999999988 56999999999999999999999986543
No 108
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=95.40 E-value=0.023 Score=44.89 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=38.5
Q ss_pred HHHHcCCHHHHHHHHHCC-CCC------CCcHHHHHHHcCCHHHHHHHHHcCC
Q 030701 95 MLAVEGTYDKMEALLSQN-IHP------VDILLMLAASEGDKPKIEELLRAGA 140 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~G-a~~------~dTpLh~Aa~~g~~~~v~~LL~~GA 140 (173)
+||..|..+.+.+|+.+| +.+ +.+.+.+|-..|+.+++..|.+.-.
T Consensus 18 caa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 18 CAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred HHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 499999999999999999 566 3388899999999999999987633
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=94.88 E-value=0.015 Score=55.43 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=52.5
Q ss_pred HHHHHHcCCHHHHHHHHHC-CCCC------CCcHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCchhhhcCc---hHH
Q 030701 93 MGMLAVEGTYDKMEALLSQ-NIHP------VDILLMLAASEGDKPKIEELL-RAGASYTVKDADGRTALERAPS---EEI 161 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~-Ga~~------~dTpLh~Aa~~g~~~~v~~LL-~~GAdi~~~d~~G~TpLh~A~~---~ei 161 (173)
+|+++..++...++.+++. |... ++-.+|+++ .++.+++-+|+ ..|..++++|..|+||||+|+. +.+
T Consensus 578 lhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l 656 (975)
T KOG0520|consen 578 LHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKL 656 (975)
T ss_pred HHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHH
Confidence 4679999999999999985 4332 335677744 45556665554 6788899999999999999973 445
Q ss_pred HHHHHhh
Q 030701 162 KDLILNF 168 (173)
Q Consensus 162 ~~lLl~~ 168 (173)
+.-|.+.
T Consensus 657 ~a~l~~l 663 (975)
T KOG0520|consen 657 VASLIEL 663 (975)
T ss_pred HHHHHHh
Confidence 5555443
No 110
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=94.60 E-value=0.083 Score=47.33 Aligned_cols=45 Identities=27% Similarity=0.201 Sum_probs=39.3
Q ss_pred HHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHc
Q 030701 94 GMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRA 138 (173)
Q Consensus 94 ~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~ 138 (173)
|+|+..||.+.++.|+..|+++ +.+|||.|+..|+.+++..++.+
T Consensus 60 hlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 60 HLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred HHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 3499999999999999999987 44999999999999888777743
No 111
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=94.51 E-value=0.066 Score=47.80 Aligned_cols=47 Identities=19% Similarity=0.120 Sum_probs=40.8
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHHHcCCHHHHHHHHHc
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAASEGDKPKIEELLRA 138 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa~~g~~~~v~~LL~~ 138 (173)
++|+||+.|+...+++|+-.|+|+ |.||+.+|-..||.++.+-|++.
T Consensus 170 pLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 170 PLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred hhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 566799999999999999999999 44999999999999888766543
No 112
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.87 E-value=0.13 Score=48.39 Aligned_cols=50 Identities=26% Similarity=0.272 Sum_probs=39.8
Q ss_pred HHHcCCHHHHHHHHHCCCCC---------------CC-cHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 030701 96 LAVEGTYDKMEALLSQNIHP---------------VD-ILLMLAASEGDKPKIEELLRAGASYTVK 145 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~~Ga~~---------------~d-TpLh~Aa~~g~~~~v~~LL~~GAdi~~~ 145 (173)
|...|.++.|+.++..-... .| |||++||..++.||+++||+.|+++...
T Consensus 95 aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~P 160 (822)
T KOG3609|consen 95 AIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIP 160 (822)
T ss_pred HHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCC
Confidence 88889999999888653221 22 9999999999999999999999987553
No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=93.84 E-value=0.037 Score=52.20 Aligned_cols=40 Identities=40% Similarity=0.557 Sum_probs=38.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcC
Q 030701 118 ILLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAP 157 (173)
Q Consensus 118 TpLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~ 157 (173)
|+||.|+..+..-.+++|+.+|+++|.+|..|++|+|.+.
T Consensus 658 s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~ 697 (785)
T KOG0521|consen 658 SLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHAT 697 (785)
T ss_pred chhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhh
Confidence 8999999999999999999999999999999999999886
No 114
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.04 E-value=0.16 Score=47.77 Aligned_cols=73 Identities=25% Similarity=0.173 Sum_probs=56.2
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCc----------ccccCCCCchhhhcC---chHH
Q 030701 95 MLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRAGASY----------TVKDADGRTALERAP---SEEI 161 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~~dTpLh~Aa~~g~~~~v~~LL~~GAdi----------~~~d~~G~TpLh~A~---~~ei 161 (173)
+|..+-+.+++++|++.....+| +|.+|...|..++|++++.+-.+. .....-+.||+.+|+ +.||
T Consensus 68 iai~nenle~~eLLl~~~~~~gd-ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEi 146 (822)
T KOG3609|consen 68 IAIDNENLELQELLLDTSSEEGD-ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEI 146 (822)
T ss_pred cccccccHHHHHHHhcCccccch-HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHH
Confidence 48888899999999998877655 555889999999999999664433 123345789999998 4788
Q ss_pred HHHHHhh
Q 030701 162 KDLILNF 168 (173)
Q Consensus 162 ~~lLl~~ 168 (173)
+++|+.-
T Consensus 147 l~~Ll~k 153 (822)
T KOG3609|consen 147 LQCLLTR 153 (822)
T ss_pred HHHHHHc
Confidence 8888753
No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=91.91 E-value=0.62 Score=36.98 Aligned_cols=54 Identities=26% Similarity=0.209 Sum_probs=47.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHcC-CCcccccCCCCchhhhcCc---hHHHHHHHhhh
Q 030701 116 VDILLMLAASEGDKPKIEELLRAG-ASYTVKDADGRTALERAPS---EEIKDLILNFS 169 (173)
Q Consensus 116 ~dTpLh~Aa~~g~~~~v~~LL~~G-Adi~~~d~~G~TpLh~A~~---~ei~~lLl~~~ 169 (173)
+-|+|+.|+..|..+.+.+|+.+| +++...|..|.+++.+|.. .+++.+|.++-
T Consensus 12 gWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 12 GWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND 69 (223)
T ss_pred cchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence 449999999999999999999999 8999999999999999863 67888877654
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=91.76 E-value=0.37 Score=23.53 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=19.3
Q ss_pred HHHHHHcCCHHHHHHHHHCCCCC
Q 030701 93 MGMLAVEGTYDKMEALLSQNIHP 115 (173)
Q Consensus 93 ~~~Aa~~G~~~~v~~LL~~Ga~~ 115 (173)
+++++..|+.++++.|+..|.++
T Consensus 6 l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 6 LHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC
Confidence 34599999999999999988754
No 117
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=78.32 E-value=5.1 Score=32.79 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=23.7
Q ss_pred CHHHHHHHHHcC-CCcccc---cCCCCchhhhcC---chHHHHHHHhhhh
Q 030701 128 DKPKIEELLRAG-ASYTVK---DADGRTALERAP---SEEIKDLILNFSV 170 (173)
Q Consensus 128 ~~~~v~~LL~~G-Adi~~~---d~~G~TpLh~A~---~~ei~~lLl~~~~ 170 (173)
...+++.++.+| +++|.+ .+.|.|-|+-|. +.+++.+|+.+++
T Consensus 229 ~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 229 SYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred cHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 345556666666 355543 334666666664 3556666666554
No 118
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=77.06 E-value=1.5 Score=42.32 Aligned_cols=62 Identities=21% Similarity=0.160 Sum_probs=45.1
Q ss_pred HHHcCCHHHHHHHHH-CCC--CC----CCcHHHHHHHcCCHHHHHHHHHcCCCcccc------cCCCCchhhhcC
Q 030701 96 LAVEGTYDKMEALLS-QNI--HP----VDILLMLAASEGDKPKIEELLRAGASYTVK------DADGRTALERAP 157 (173)
Q Consensus 96 Aa~~G~~~~v~~LL~-~Ga--~~----~dTpLh~Aa~~g~~~~v~~LL~~GAdi~~~------d~~G~TpLh~A~ 157 (173)
.|..++++..-+|+. .|. ++ |.||||+|+..|+..++..|.+.|++.... +..|.|+-.+|.
T Consensus 614 fca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~ 688 (975)
T KOG0520|consen 614 FCAALGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLAR 688 (975)
T ss_pred HhhhcCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhh
Confidence 367777777665553 232 33 449999999999999999999888765543 345888888775
No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=68.74 E-value=3.8 Score=36.91 Aligned_cols=33 Identities=18% Similarity=0.282 Sum_probs=29.3
Q ss_pred HHHHHHHcCCHHHHHHHHHCCCCC------CCcHHHHHH
Q 030701 92 YMGMLAVEGTYDKMEALLSQNIHP------VDILLMLAA 124 (173)
Q Consensus 92 ~~~~Aa~~G~~~~v~~LL~~Ga~~------~dTpLh~Aa 124 (173)
+||+|+..|.-++|.+||+.|+|+ |-||..++.
T Consensus 433 ~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 433 FLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA 471 (591)
T ss_pred HHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence 567899999999999999999998 449988877
No 120
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=67.18 E-value=13 Score=29.31 Aligned_cols=43 Identities=23% Similarity=0.252 Sum_probs=25.9
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCchhhhcCchHHHHHHHh
Q 030701 119 LLMLAASEGDKPKIEELLRAGASYTVKDADGRTALERAPSEEIKDLILN 167 (173)
Q Consensus 119 pLh~Aa~~g~~~~v~~LL~~GAdi~~~d~~G~TpLh~A~~~ei~~lLl~ 167 (173)
-|..|+..|-...+...++.|-+++. +.|..|+..+-.++|.-
T Consensus 146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~y 188 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDY 188 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHH
Confidence 45667777777777767777666653 56666665444444433
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=56.98 E-value=60 Score=25.62 Aligned_cols=44 Identities=20% Similarity=0.265 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHCCCCCCC--cHHHHHHHcCCHHH
Q 030701 84 DDVEQYFNYMGMLAVEGTYDKMEALLSQNIHPVD--ILLMLAASEGDKPK 131 (173)
Q Consensus 84 ~~~~~l~~~~~~Aa~~G~~~~v~~LL~~Ga~~~d--TpLh~Aa~~g~~~~ 131 (173)
...+.+|+ +||..-++|+|+|. .+...+.+ +.+-.|....+.+.
T Consensus 74 ~~~q~LFE---lAC~~qkydiV~WI-~qnL~i~~~~~iFdIA~~~kDlsL 119 (192)
T PF03158_consen 74 YLNQELFE---LACEEQKYDIVKWI-GQNLHIYNPEDIFDIAFAKKDLSL 119 (192)
T ss_pred hHHHHHHH---HHHHHccccHHHHH-hhccCCCCchhhhhhhhhccchhH
Confidence 34556777 79999999999988 33223322 45566666666654
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=55.11 E-value=48 Score=27.30 Aligned_cols=45 Identities=22% Similarity=0.249 Sum_probs=37.6
Q ss_pred HHcCCHHHHHHHHHCCCC-C---------CCcHHHHHHHcCCHHHHHHHHHcCCC
Q 030701 97 AVEGTYDKMEALLSQNIH-P---------VDILLMLAASEGDKPKIEELLRAGAS 141 (173)
Q Consensus 97 a~~G~~~~v~~LL~~Ga~-~---------~dTpLh~Aa~~g~~~~v~~LL~~GAd 141 (173)
....+..++++.|+.|.. + |||-|--|...+..+++.+||++||-
T Consensus 225 ~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~ 279 (284)
T PF06128_consen 225 EHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGAI 279 (284)
T ss_pred hcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence 344567889999998853 3 77999999999999999999999983
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=54.78 E-value=28 Score=22.70 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=34.6
Q ss_pred HHHHcCCHHHHHHHHHCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 030701 95 MLAVEGTYDKMEALLSQNIHPVDILLMLAASEGDKPKIEELLRA 138 (173)
Q Consensus 95 ~Aa~~G~~~~v~~LL~~Ga~~~dTpLh~Aa~~g~~~~v~~LL~~ 138 (173)
.|..-|+.|+++.++..+ .+.+..+..|...-+-+++++|++.
T Consensus 12 ~Ai~GGN~eII~~c~~~~-~~~~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 12 YAIIGGNFEIINICLKKN-KPDNDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHhCCCHHHHHHHHHHh-ccHHHHHHHHHHHhhHHHHHHHHHh
Confidence 388899999999998766 3334568888888888999999865
Done!